SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'F43'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T46_A_STIA3_2
(HOMO SAPIENS V-KIT
HARDY-ZUCKERMAN 4
FELINE SARCOMA VIRAL
ONCOGENE HOMOLOG)
1e6y METHYL-COENZYME M
REDUCTASE SUBUNIT
ALPHA

(Methanosarcina
barkeri)
4 / 7 VAL A1160
VAL A1149
TYR A1176
CYH A1175
F43  A2570 (-3.8A)
None
None
None
1.12A 1t46A-1e6yA:
undetectable
1t46A-1e6yA:
20.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AI8_B_HNQB255_1
(CATHEPSIN B)
5n28 METHYL-COENZYME M
REDUCTASE SUBUNIT
ALPHA

(Methanotorris
formicicus)
4 / 6 GLN A 233
GLY A 146
CYH A 164
TRP A 229
F43  A 604 (-4.0A)
None
None
None
1.25A 3ai8B-5n28A:
undetectable
3ai8B-5n28A:
17.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ELZ_B_CHDB152_0
(ILEAL BILE
ACID-BINDING PROTEIN)
1e6v METHYL-COENZYME M
REDUCTASE I ALPHA
SUBUNIT

(Methanopyrus
kandleri)
3 / 3 ASN A 140
HIS A 141
VAL A 148
None
None
F43  A1553 (-3.6A)
0.85A 3elzB-1e6vA:
0.0
3elzB-1e6vA:
13.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ELZ_B_CHDB152_0
(ILEAL BILE
ACID-BINDING PROTEIN)
1e6y METHYL-COENZYME M
REDUCTASE SUBUNIT
ALPHA

(Methanosarcina
barkeri)
3 / 3 ASN A1151
HIS A1152
VAL A1159
None
None
F43  A2570 (-3.7A)
0.90A 3elzB-1e6yA:
undetectable
3elzB-1e6yA:
12.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ELZ_B_CHDB152_0
(ILEAL BILE
ACID-BINDING PROTEIN)
1mro METHYL-COENZYME M
REDUCTASE

(Methanothermobac
ter
marburgensis)
3 / 3 ASN A 137
HIS A 138
VAL A 145
None
None
F43  A 700 (-3.5A)
0.88A 3elzB-1mroA:
0.0
3elzB-1mroA:
11.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ELZ_B_CHDB152_0
(ILEAL BILE
ACID-BINDING PROTEIN)
5a8r METHYL-COENZYME M
REDUCTASE II SUBUNIT
ALPHA

(Methanothermobac
ter
marburgensis)
3 / 3 ASN A 140
HIS A 141
VAL A 148
None
None
F43  A 603 (-3.5A)
0.84A 3elzB-5a8rA:
undetectable
3elzB-5a8rA:
13.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ELZ_B_CHDB152_0
(ILEAL BILE
ACID-BINDING PROTEIN)
5n28 METHYL-COENZYME M
REDUCTASE SUBUNIT
ALPHA

(Methanotorris
formicicus)
3 / 3 ASN A 140
HIS A 141
VAL A 148
None
None
F43  A 604 (-3.5A)
0.85A 3elzB-5n28A:
undetectable
3elzB-5n28A:
13.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KVV_D_URFD254_1
(URIDINE
PHOSPHORYLASE)
5a8r METHYL-COENZYME M
REDUCTASE II SUBUNIT
ALPHA

(Methanothermobac
ter
marburgensis)
4 / 6 GLY A 145
GLN A 233
MET A 236
VAL A 156
None
F43  A 603 (-3.5A)
F43  A 603 (-3.8A)
None
1.14A 3kvvD-5a8rA:
undetectable
3kvvD-5a8rA:
17.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4E1V_F_URFF1301_1
(URIDINE
PHOSPHORYLASE)
5a8r METHYL-COENZYME M
REDUCTASE II SUBUNIT
ALPHA

(Methanothermobac
ter
marburgensis)
4 / 6 GLY A 145
GLN A 233
MET A 236
VAL A 156
None
F43  A 603 (-3.5A)
F43  A 603 (-3.8A)
None
1.11A 4e1vF-5a8rA:
undetectable
4e1vF-5a8rA:
19.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JW1_A_CELA602_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
1e6v METHYL-COENZYME M
REDUCTASE I ALPHA
SUBUNIT

(Methanopyrus
kandleri)
5 / 12 ALA A 246
VAL A 148
GLY A 146
ALA A 142
LEU A 143
F43  A1553 (-3.6A)
F43  A1553 (-3.6A)
None
None
None
1.06A 5jw1A-1e6vA:
0.0
5jw1A-1e6vA:
18.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JW1_B_CELB602_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
1e6v METHYL-COENZYME M
REDUCTASE I ALPHA
SUBUNIT

(Methanopyrus
kandleri)
5 / 12 ALA A 246
VAL A 148
GLY A 146
ALA A 142
LEU A 143
F43  A1553 (-3.6A)
F43  A1553 (-3.6A)
None
None
None
1.03A 5jw1B-1e6vA:
0.0
5jw1B-1e6vA:
18.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JW1_B_CELB602_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
5a8r METHYL-COENZYME M
REDUCTASE II SUBUNIT
ALPHA

(Methanothermobac
ter
marburgensis)
5 / 12 ALA A 246
VAL A 148
GLY A 146
ALA A 142
LEU A 143
F43  A 603 (-3.3A)
F43  A 603 (-3.5A)
None
None
None
1.10A 5jw1B-5a8rA:
undetectable
5jw1B-5a8rA:
20.23