SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'EAM'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LD6_B_KKKB602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
5 / 12 PHE A 145
TYR A 113
GLY A 109
ILE A 162
MET A 148
None
None
None
EAM  A1188 (-3.8A)
None
1.49A 3ld6B-2yekA:
undetectable
3ld6B-2yekA:
15.98
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3U5J_A_08HA1_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
7 / 7 TRP A  97
PRO A  98
LEU A 108
LEU A 110
ASN A 156
ILE A 162
MET A 165
None
EAM  A1188 (-4.6A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
EAM  A1188 ( 4.1A)
0.47A 3u5jA-2yekA:
20.4
3u5jA-2yekA:
70.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3U5K_A_08JA1_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
8 / 8 TRP A  97
PRO A  98
VAL A 103
LEU A 108
LEU A 110
ASN A 156
ILE A 162
MET A 165
None
EAM  A1188 (-4.6A)
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
EAM  A1188 ( 4.1A)
0.39A 3u5kA-2yekA:
20.6
3u5kA-2yekA:
70.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3U5K_B_08JB2_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
7 / 7 TRP A  97
PRO A  98
VAL A 103
LEU A 108
LEU A 110
ASN A 156
ILE A 162
None
EAM  A1188 (-4.6A)
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
0.39A 3u5kB-2yekA:
20.3
3u5kB-2yekA:
70.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3U5K_C_08JC3_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
8 / 8 TRP A  97
PRO A  98
VAL A 103
LEU A 108
LEU A 110
ASN A 156
ILE A 162
MET A 165
None
EAM  A1188 (-4.6A)
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
EAM  A1188 ( 4.1A)
0.43A 3u5kC-2yekA:
19.7
3u5kC-2yekA:
70.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3U5K_D_08JD4_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
8 / 8 TRP A  97
PRO A  98
VAL A 103
LEU A 108
LEU A 110
ASN A 156
ILE A 162
MET A 165
None
EAM  A1188 (-4.6A)
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
EAM  A1188 ( 4.1A)
0.56A 3u5kD-2yekA:
20.5
3u5kD-2yekA:
70.07
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A9J_A_TYLA1188_1
(BROMODOMAIN
CONTAINING 2)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
5 / 5 VAL A 103
LEU A 108
LEU A 110
ASN A 156
ILE A 162
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
0.40A 4a9jA-2yekA:
23.3
4a9jA-2yekA:
99.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A9J_B_TYLB1187_1
(BROMODOMAIN
CONTAINING 2)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
5 / 5 VAL A 103
LEU A 108
LEU A 110
ASN A 156
ILE A 162
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
0.43A 4a9jB-2yekA:
22.6
4a9jB-2yekA:
99.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A9J_C_TYLC1184_1
(BROMODOMAIN
CONTAINING 2)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
5 / 5 VAL A 103
LEU A 108
LEU A 110
ASN A 156
ILE A 162
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
0.34A 4a9jC-2yekA:
21.5
4a9jC-2yekA:
99.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A9K_A_TYLA2200_1
(CREB-BINDING PROTEIN)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
4 / 6 VAL A 103
LEU A 108
TYR A 155
ASN A 156
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
None
EAM  A1188 (-3.2A)
0.47A 4a9kA-2yekA:
17.8
4a9kA-2yekA:
34.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4C66_A_H4CA1168_0
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
8 / 9 TRP A  97
PRO A  98
VAL A 103
LEU A 108
LEU A 110
ASN A 156
ILE A 162
MET A 165
None
EAM  A1188 (-4.6A)
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
EAM  A1188 ( 4.1A)
0.47A 4c66A-2yekA:
20.4
4c66A-2yekA:
69.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4C66_A_H4CA1168_0
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
5 / 9 VAL A 103
LEU A 108
ASN A 156
ILE A 162
MET A 165
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
EAM  A1188 ( 4.1A)
1.43A 4c66A-2yekA:
20.4
4c66A-2yekA:
69.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4LZR_A_LOCA201_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
6 / 8 TRP A  97
VAL A 103
LEU A 108
LEU A 110
TYR A 155
ILE A 162
None
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
None
EAM  A1188 (-3.8A)
0.56A 4lzrA-2yekA:
20.2
4lzrA-2yekA:
66.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4LZR_A_LOCA201_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
7 / 8 TRP A  97
VAL A 103
LEU A 110
TYR A 155
ASN A 156
ASP A 160
ILE A 162
None
EAM  A1188 (-4.4A)
EAM  A1188 (-4.5A)
None
EAM  A1188 (-3.2A)
None
EAM  A1188 (-3.8A)
0.61A 4lzrA-2yekA:
20.2
4lzrA-2yekA:
66.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4LZR_A_LOCA201_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
5 / 8 VAL A 103
LEU A 108
ASN A 156
ASP A 160
ILE A 162
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-3.2A)
None
EAM  A1188 (-3.8A)
1.11A 4lzrA-2yekA:
20.2
4lzrA-2yekA:
66.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y03_A_SALA801_1
(PROTEIN POLYBROMO-1)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
4 / 7 TYR A 113
MET A 148
ASN A 156
ILE A 162
None
None
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
0.64A 4y03A-2yekA:
15.0
4y03A-2yekA:
29.11
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5PBE_A_TYLA2001_1
(BROMODOMAIN ADJACENT
TO ZINC FINGER
DOMAIN PROTEIN 2B)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
5 / 6 PRO A  98
VAL A 103
TYR A 113
ASN A 156
ILE A 162
EAM  A1188 (-4.6A)
EAM  A1188 (-4.4A)
None
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
0.88A 5pbeA-2yekA:
16.2
5pbeA-2yekA:
32.08
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5Y1Y_A_HNQA201_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
7 / 8 PRO A  98
VAL A 103
LEU A 108
CYH A 152
TYR A 155
ASN A 156
ILE A 162
EAM  A1188 (-4.6A)
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 ( 4.3A)
None
EAM  A1188 (-3.2A)
EAM  A1188 (-3.8A)
0.42A 5y1yA-2yekA:
19.9
5y1yA-2yekA:
68.61
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5Y1Y_A_HNQA201_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
2yek BROMODOMAIN-CONTAINI
NG PROTEIN 2

(Homo
sapiens)
7 / 8 PRO A  98
VAL A 103
LEU A 108
LEU A 110
CYH A 152
TYR A 155
ASN A 156
EAM  A1188 (-4.6A)
EAM  A1188 (-4.4A)
EAM  A1188 ( 3.8A)
EAM  A1188 (-4.5A)
EAM  A1188 ( 4.3A)
None
EAM  A1188 (-3.2A)
0.40A 5y1yA-2yekA:
19.9
5y1yA-2yekA:
68.61