SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'DGF'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GHM_A_CEDA1_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 12 ALA A  61
SER A  62
LYS A  65
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.27A 1ghmA-2exaA:
17.8
1ghmA-2exaA:
19.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_A_CFXA1300_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 12 ALA A  61
SER A  62
LYS A  65
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.39A 1i2wA-2exaA:
17.6
1i2wA-2exaA:
20.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_B_CFXB2300_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 12 ALA A  61
SER A  62
LYS A  65
SER A 306
ASN A 308
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
DGF  A 501 (-3.4A)
0.38A 1i2wB-2exaA:
17.8
1i2wB-2exaA:
20.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YMX_A_CFXA1001_1
(BETA-LACTAMASE
CTX-M-9)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 12 SER A  62
LYS A  65
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 (-1.3A)
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.33A 1ymxA-2exaA:
17.2
1ymxA-2exaA:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YMX_B_CFXB1002_1
(BETA-LACTAMASE
CTX-M-9)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 12 SER A  62
LYS A  65
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 (-1.3A)
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.31A 1ymxB-2exaA:
17.5
1ymxB-2exaA:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HLW_A_CE3A301_1
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
5 / 12 LYS A  65
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.40A 3hlwA-2exaA:
17.5
3hlwA-2exaA:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HLW_B_CE3B302_1
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
5 / 12 SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
0.39A 3hlwB-2exaA:
17.6
3hlwB-2exaA:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HUO_A_PNNA300_0
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
5 / 12 LYS A  65
ASN A 308
LYS A 417
THR A 418
GLY A 419
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
0.36A 3huoA-2exaA:
17.5
3huoA-2exaA:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MZE_A_CFXA364_1
(D-ALANYL-D-ALANINE
CARBOXYPEPTIDASE
DACA)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 12 ALA A  61
SER A  62
LYS A  65
ASN A 308
LEU A 359
THR A 418
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.0A)
DGF  A 501 (-4.2A)
None
DGF  A 501 (-3.4A)
0.37A 3mzeA-2exaA:
16.5
3mzeA-2exaA:
22.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q07_A_WPPA300_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
5 / 12 LYS A  65
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.42A 3q07A-2exaA:
17.1
3q07A-2exaA:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q07_B_WPPB400_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
5 / 12 LYS A  65
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.48A 3q07B-2exaA:
16.9
3q07B-2exaA:
22.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SH8_A_CEDA1_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 12 ALA A  61
SER A  62
SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
0.42A 3sh8A-2exaA:
17.4
3sh8A-2exaA:
20.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SH8_B_CEDB1_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 12 ALA A  61
SER A  62
LYS A  65
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.45A 3sh8B-2exaA:
17.5
3sh8B-2exaA:
20.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EUZ_A_MEMA401_1
(CARBAPENEM-HYDROLIZI
NG BETA-LACTAMASE
SFC-1)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 12 LYS A  65
SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
DGF  A 501 ( 4.0A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
0.38A 4euzA-2exaA:
16.4
4euzA-2exaA:
21.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EUZ_A_MEMA401_1
(CARBAPENEM-HYDROLIZI
NG BETA-LACTAMASE
SFC-1)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 12 SER A 306
ASN A 308
LEU A 359
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
DGF  A 501 (-4.2A)
None
None
DGF  A 501 (-3.4A)
0.67A 4euzA-2exaA:
16.4
4euzA-2exaA:
21.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FH2_A_0RNA303_1
(BETA-LACTAMASE SHV-1)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 10 SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
ALA A  61
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
DGF  A 501 (-3.6A)
1.42A 4fh2A-2exaA:
18.8
4fh2A-2exaA:
24.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N9K_A_CEDA301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 12 ALA A  61
SER A  62
SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
0.41A 4n9kA-2exaA:
17.7
4n9kA-2exaA:
20.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N9K_B_CEDB301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 12 ALA A  61
SER A  62
SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
0.42A 4n9kB-2exaA:
17.6
4n9kB-2exaA:
20.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PM9_A_CE3A301_1
(BETA-LACTAMASE
CTX-M-14)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 12 SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
ALA A  61
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
DGF  A 501 (-3.6A)
1.48A 4pm9A-2exaA:
17.4
4pm9A-2exaA:
22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHY_A_CEDA301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 12 ALA A  61
SER A  62
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.46A 5ghyA-2exaA:
17.3
5ghyA-2exaA:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHY_B_CEDB301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
6 / 12 ALA A  61
SER A  62
SER A 306
ASN A 308
LYS A 417
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
DGF  A 501 (-3.4A)
0.44A 5ghyB-2exaA:
17.5
5ghyB-2exaA:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHZ_A_CEDA301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 11 ALA A  61
SER A  62
SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
0.42A 5ghzA-2exaA:
17.5
5ghzA-2exaA:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHZ_B_CEDB301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
7 / 10 ALA A  61
SER A  62
SER A 306
ASN A 308
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-3.6A)
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
DGF  A 501 (-3.0A)
None
None
DGF  A 501 (-3.4A)
0.42A 5ghzB-2exaA:
17.5
5ghzB-2exaA:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6A_D_9F2D301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
5 / 12 SER A  62
SER A 306
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
None
None
DGF  A 501 (-3.4A)
0.33A 6b6aD-2exaA:
17.2
6b6aD-2exaA:
11.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6C_A_9F2A301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
5 / 12 SER A  62
SER A 306
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
None
None
DGF  A 501 (-3.4A)
0.42A 6b6cA-2exaA:
17.2
6b6cA-2exaA:
11.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6F_A_9F2A301_1
(BETA-LACTAMASE)
2exa PENICILLIN-BINDING
PROTEIN 4

(Escherichia
coli)
5 / 12 SER A  62
SER A 306
LYS A 417
THR A 418
GLY A 419
DGF  A 501 (-1.3A)
DGF  A 501 (-3.3A)
None
None
DGF  A 501 (-3.4A)
0.53A 6b6fA-2exaA:
16.9
6b6fA-2exaA:
11.60