SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'D6N'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OXT_B_SAMB300_0
(NUCLEOSIDE-2'-O-METH
YLTRANSFERASE)
6fea NITROGENASE PROTEIN
ALPHA CHAIN

(Azotobacter
vinelandii)
6 / 12 GLY A  59
GLY A 237
GLY A 239
THR A 217
LEU A 220
LYS A  83
None
None
None
None
None
D6N  A 502 (-3.1A)
1.41A 2oxtB-6feaA:
2.1
2oxtB-6feaA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V3O_A_T1CA404_1
(TETX2 PROTEIN)
6fea NITROGENASE PROTEIN
ALPHA CHAIN

(Azotobacter
vinelandii)
5 / 12 ASN A 184
HIS A 180
GLY A  53
GLY A 237
ASN A  93
None
D6N  A 502 (-4.6A)
None
None
None
1.27A 3v3oA-6feaA:
undetectable
3v3oA-6feaA:
17.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A99_D_MIYD391_1
(TETX2 PROTEIN)
6fea NITROGENASE PROTEIN
ALPHA CHAIN

(Azotobacter
vinelandii)
5 / 11 ASN A 184
HIS A 180
GLY A  53
GLY A 237
ASN A  93
None
D6N  A 502 (-4.6A)
None
None
None
1.35A 4a99D-6feaA:
2.9
4a99D-6feaA:
16.47