SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'D1D'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2YQZ_A_SAMA301_1 (HYPOTHETICAL PROTEIN TTHA0223)	4isa	UDP-3-O-[3-HYDROXYMY RISTOYL] N-ACETYLGLUCOSAMINE DEACETYLASE (Escherichia coli)	4 / 5	GLU A 234 ARG A 188 ASP A 233 ASP A 167	None D1D A 421 (-4.6A) None None	1.40A	2yqzA-4isaA: undetectable	2yqzA-4isaA: 18.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2YQZ_B_SAMB401_1 (HYPOTHETICAL PROTEIN TTHA0223)	4isa	UDP-3-O-[3-HYDROXYMY RISTOYL] N-ACETYLGLUCOSAMINE DEACETYLASE (Escherichia coli)	4 / 5	GLU A 234 ARG A 188 ASP A 233 ASP A 167	None D1D A 421 (-4.6A) None None	1.42A	2yqzB-4isaA: undetectable	2yqzB-4isaA: 18.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3LN1_D_CELD682_2 (PROSTAGLANDIN G/H SYNTHASE 2)	3t38	ARSENATE REDUCTASE (Corynebacterium glutamicum)	4 / 5	ARG A 47 LEU A 55 ARG A 66 ILE A 38	None None D1D A3236 (-3.3A) None	1.19A	3ln1D-3t38A: undetectable	3ln1D-3t38A: 16.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3OCT_A_1N1A663_2 (TYROSINE-PROTEIN KINASE BTK)	3uem	PROTEIN DISULFIDE-ISOMERASE (Homo sapiens)	4 / 5	PHE A 290 ILE A 301 ASN A 274 PHE A 240	None D1D A2815 ( 4.3A) None D1D A2815 ( 4.4A)	1.35A	3octA-3uemA: undetectable	3octA-3uemA: 22.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3QL0_A_FOLA160_0 (DIHYDROFOLATE REDUCTASE)	3uem	PROTEIN DISULFIDE-ISOMERASE (Homo sapiens)	5 / 12	ILE A 339 LEU A 272 PHE A 275 LYS A 276 ILE A 289	None None None None D1D A2815 (-4.2A)	1.19A	3ql0A-3uemA: undetectable	3ql0A-3uemA: 19.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4KJK_A_FOLA201_0 (DIHYDROFOLATE REDUCTASE)	3uem	PROTEIN DISULFIDE-ISOMERASE (Homo sapiens)	5 / 12	ILE A 339 PHE A 275 LYS A 276 ILE A 289 ILE A 257	None None None D1D A2815 (-4.2A) None	1.07A	4kjkA-3uemA: undetectable	4kjkA-3uemA: 18.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4P3R_A_FOLA201_0 (DIHYDROFOLATE REDUCTASE)	3uem	PROTEIN DISULFIDE-ISOMERASE (Homo sapiens)	5 / 12	ILE A 339 PHE A 275 LYS A 276 ILE A 289 ILE A 257	None None None D1D A2815 (-4.2A) None	1.04A	4p3rA-3uemA: undetectable	4p3rA-3uemA: 18.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6DRY_A_H8DA2001_0 (5HT2B RECEPTOR, BRIL CHIMERA)	3t38	ARSENATE REDUCTASE (Corynebacterium glutamicum)	5 / 11	ASP A 149 VAL A 150 LEU A 146 PHE A 62 TYR A 37	None None None None D1D A3236 (-3.6A)	1.08A	6dryA-3t38A: undetectable	6dryA-3t38A: 21.88

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["2YQZ_A_SAMA301_1","HYPOTHETICAL PROTEIN TTHA0223","4isa","UDP-3-O-[3-HYDROXYMYRISTOYL] N-ACETYLGLUCOSAMINE DEACETYLASE","Escherichia coli",4,"GLU A 234;ARG A 188;ASP A 233;ASP A 167","None;D1D A 421 (-4.6A);None;None","1.40A","2yqzA-4isaA:undetectable",null],["2YQZ_B_SAMB401_1","HYPOTHETICAL PROTEIN TTHA0223","4isa","UDP-3-O-[3-HYDROXYMYRISTOYL] N-ACETYLGLUCOSAMINE DEACETYLASE","Escherichia coli",4,"GLU A 234;ARG A 188;ASP A 233;ASP A 167","None;D1D A 421 (-4.6A);None;None","1.42A","2yqzB-4isaA:undetectable","2yqzA-4isaA:18.85"],["3LN1_D_CELD682_2","PROSTAGLANDIN G\/H SYNTHASE 2","3t38","ARSENATE REDUCTASE","Corynebacterium glutamicum",4,"ARG A  47;LEU A  55;ARG A  66;ILE A  38","None;None;D1D A3236 (-3.3A);None","1.19A","3ln1D-3t38A:undetectable","2yqzB-4isaA:18.85"],["3OCT_A_1N1A663_2","TYROSINE-PROTEIN KINASE BTK","3uem","PROTEIN DISULFIDE-ISOMERASE","Homo sapiens",4,"PHE A 290;ILE A 301;ASN A 274;PHE A 240","None;D1D A2815 ( 4.3A);None;D1D A2815 ( 4.4A)","1.35A","3octA-3uemA:undetectable","3ln1D-3t38A:16.61"],["3QL0_A_FOLA160_0","DIHYDROFOLATE REDUCTASE","3uem","PROTEIN DISULFIDE-ISOMERASE","Homo sapiens",5,"ILE A 339;LEU A 272;PHE A 275;LYS A 276;ILE A 289","None;None;None;None;D1D A2815 (-4.2A)","1.19A","3ql0A-3uemA:undetectable","3octA-3uemA:22.07"],["4KJK_A_FOLA201_0","DIHYDROFOLATE REDUCTASE","3uem","PROTEIN DISULFIDE-ISOMERASE","Homo sapiens",5,"ILE A 339;PHE A 275;LYS A 276;ILE A 289;ILE A 257","None;None;None;D1D A2815 (-4.2A);None","1.07A","4kjkA-3uemA:undetectable","3ql0A-3uemA:19.15"],["4P3R_A_FOLA201_0","DIHYDROFOLATE REDUCTASE","3uem","PROTEIN DISULFIDE-ISOMERASE","Homo sapiens",5,"ILE A 339;PHE A 275;LYS A 276;ILE A 289;ILE A 257","None;None;None;D1D A2815 (-4.2A);None","1.04A","4p3rA-3uemA:undetectable","4kjkA-3uemA:18.59"],["6DRY_A_H8DA2001_0","5HT2B RECEPTOR, BRIL CHIMERA","3t38","ARSENATE REDUCTASE","Corynebacterium glutamicum",5,"ASP A 149;VAL A 150;LEU A 146;PHE A  62;TYR A  37","None;None;None;None;D1D A3236 (-3.6A)","1.08A","6dryA-3t38A:undetectable","4p3rA-3uemA:18.59"]]