SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'CIY'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KIA_C_SAMC2293_0
(GLYCINE
N-METHYLTRANSFERASE)		 4wgg DOUBLE BOND
REDUCTASE
(Zingiber
officinale) 		5 / 12 ILE A 127
GLY A 108
VAL A  89
GLY A 142
LEU A 290
 None
None
None
None
CIY  A 401 ( 4.0A)
 0.90A 1kiaC-4wggA:
7.5		 1kiaC-4wggA:
22.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBH_B_SAMB1293_0
(GLYCINE
N-METHYLTRANSFERASE)		 4wgg DOUBLE BOND
REDUCTASE
(Zingiber
officinale) 		5 / 12 ILE A 127
GLY A 108
VAL A  89
GLY A 142
LEU A 290
 None
None
None
None
CIY  A 401 ( 4.0A)
 0.92A 1nbhB-4wggA:
6.8		 1nbhB-4wggA:
22.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BFM_A_TOPA1290_1
(PTERIDINE REDUCTASE
1)		 5fxe EUGENOL OXIDASE
(Rhodococcus
jostii) 		5 / 9 ASP A 365
LEU A 152
LEU A 381
LEU A 438
HIS A 390
 None
FAD  A 600 (-4.7A)
FAD  A 600 (-4.8A)
CIY  A 602 (-4.8A)
FAD  A 600 ( 2.6A)
 1.42A 2bfmA-5fxeA:
undetectable
2bfmD-5fxeA:
undetectable		 2bfmA-5fxeA:
21.70
2bfmD-5fxeA:
21.70
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2W98_B_P1ZB1356_1
(PROSTAGLANDIN
REDUCTASE 2)		 4hfn ALLYL ALCOHOL
DEHYDROGENASE
(Nicotiana
tabacum) 		4 / 8 TYR A  55
TYR A 258
LEU A 283
VAL A 284
 CIY  A 401 (-4.5A)
NAP  A 400 ( 4.3A)
NAP  A 400 ( 4.3A)
NAP  A 400 (-3.6A)
 0.52A 2w98B-4hfnA:
43.6		 2w98B-4hfnA:
35.48
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2W98_B_P1ZB1356_1
(PROSTAGLANDIN
REDUCTASE 2)		 4wgg DOUBLE BOND
REDUCTASE
(Zingiber
officinale) 		4 / 8 TYR A  61
TYR A 265
LEU A 290
VAL A 291
 CIY  A 401 (-4.4A)
CIY  A 401 ( 4.0A)
CIY  A 401 ( 4.0A)
CIY  A 401 ( 3.3A)
 0.63A 2w98B-4wggA:
44.5		 2w98B-4wggA:
34.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5A06_D_SORD1343_0
(ALDOSE-ALDOSE
OXIDOREDUCTASE)		 5fxe EUGENOL OXIDASE
(Rhodococcus
jostii) 		4 / 5 ALA A 423
ARG A 278
ALA A 285
GLU A 378
 None
CIY  A 602 ( 4.4A)
None
CIY  A 602 (-3.6A)
 1.19A 5a06C-5fxeA:
undetectable
5a06D-5fxeA:
undetectable		 5a06C-5fxeA:
19.78
5a06D-5fxeA:
19.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CDN_P_EVPP2101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT
B,DNA GYRASE SUBUNIT
B)		 5fxe EUGENOL OXIDASE
(Rhodococcus
jostii) 		4 / 6 SER A 394
GLY A 515
ASP A 479
ARG A  97
 CIY  A 602 ( 4.4A)
None
GOL  A1530 (-3.5A)
GOL  A1530 ( 4.6A)
 0.90A 5cdnT-5fxeA:
2.3
5cdnU-5fxeA:
undetectable		 5cdnT-5fxeA:
23.59
5cdnU-5fxeA:
17.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5FXF_A_BEZA601_0
(EUGENOL OXIDASE)		 5fxe EUGENOL OXIDASE
(Rhodococcus
jostii) 		9 / 9 TYR A  91
VAL A 166
TYR A 168
GLN A 425
ILE A 427
VAL A 436
LEU A 438
TYR A 471
ARG A 472
 CIY  A 602 (-3.9A)
FAD  A 600 (-4.0A)
FAD  A 600 ( 4.5A)
CIY  A 602 (-3.5A)
None
CIY  A 602 (-4.8A)
CIY  A 602 (-4.8A)
CIY  A 602 (-4.5A)
FAD  A 600 ( 3.0A)
 0.23A 5fxfA-5fxeA:
65.6		 5fxfA-5fxeA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5FXF_B_BEZB601_0
(EUGENOL OXIDASE)		 5fxe EUGENOL OXIDASE
(Rhodococcus
jostii) 		10 / 10 TYR A  91
ASP A 151
VAL A 166
TYR A 168
GLN A 425
ILE A 427
VAL A 436
LEU A 438
TYR A 471
ARG A 472
 CIY  A 602 (-3.9A)
FAD  A 600 ( 3.5A)
FAD  A 600 (-4.0A)
FAD  A 600 ( 4.5A)
CIY  A 602 (-3.5A)
None
CIY  A 602 (-4.8A)
CIY  A 602 (-4.8A)
CIY  A 602 (-4.5A)
FAD  A 600 ( 3.0A)
 0.27A 5fxfB-5fxeA:
64.7		 5fxfB-5fxeA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UC1_A_486A801_2
(GLUCOCORTICOID
RECEPTOR)		 5fxe EUGENOL OXIDASE
(Rhodococcus
jostii) 		3 / 3 TRP A 384
MET A 282
ASN A 279
 None
CIY  A 602 ( 4.0A)
None
 1.15A 5uc1B-5fxeA:
undetectable		 5uc1B-5fxeA:
10.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UC1_B_486B801_1
(GLUCOCORTICOID
RECEPTOR)		 5fxe EUGENOL OXIDASE
(Rhodococcus
jostii) 		3 / 3 TRP A 384
MET A 282
ASN A 279
 None
CIY  A 602 ( 4.0A)
None
 1.11A 5uc1A-5fxeA:
undetectable		 5uc1A-5fxeA:
10.83