SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'CHT'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GRM_A_DVAA6_0
(GRAMICIDIN A)
4cnl PUTATIVE
PNEUMOCOCCAL SURFACE
PROTEIN

(Streptococcus
pneumoniae)
3 / 3 ALA A 222
VAL A 215
TRP A 214
None
None
CHT  A1275 (-3.5A)
0.93A 1grmA-4cnlA:
undetectable
1grmA-4cnlA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GRM_B_DVAB6_0
(GRAMICIDIN A)
4cnl PUTATIVE
PNEUMOCOCCAL SURFACE
PROTEIN

(Streptococcus
pneumoniae)
3 / 3 ALA A 222
VAL A 215
TRP A 214
None
None
CHT  A1275 (-3.5A)
0.93A 1grmB-4cnlA:
undetectable
1grmB-4cnlA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FCN_B_DVAB35_0
(UBIQUITIN)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
4 / 6 ARG A 348
LEU A 321
GLU A 254
ILE A 253
CHT  A1001 ( 4.8A)
None
CA  A 371 ( 3.4A)
GOL  A1003 (-4.3A)
0.97A 2fcnA-3c5iA:
undetectable
2fcnB-3c5iA:
undetectable
2fcnA-3c5iA:
11.78
2fcnB-3c5iA:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NYR_B_SVRB401_2
(NAD-DEPENDENT
DEACETYLASE
SIRTUIN-5)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
4 / 6 PHE A 267
GLN A 220
ASN A 222
LEU A 132
None
CHT  A1001 (-3.2A)
MG  A 370 ( 4.4A)
None
1.24A 2nyrA-3c5iA:
undetectable
2nyrA-3c5iA:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
1h8g MAJOR AUTOLYSIN
(Streptococcus
pneumoniae)
4 / 4 TRP A 241
TRP A 248
TYR A 269
MET A 278
CHT  A 402 ( 4.2A)
CHT  A 402 (-3.8A)
CHT  A 402 (-4.9A)
CHT  A 402 ( 4.1A)
0.27A 2x8oA-1h8gA:
8.5
2x8oA-1h8gA:
15.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
2wwd 1,4-BETA-N-ACETYLMUR
AMIDASE

(Streptococcus
pneumoniae)
4 / 4 TRP A  59
TRP A  68
TYR A  86
MET A  94
CHT  A 702 (-3.6A)
CHT  A 702 (-3.9A)
CHT  A 702 (-3.7A)
CHT  A 702 ( 3.5A)
0.64A 2x8oA-2wwdA:
10.6
2x8oA-2wwdA:
22.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
2wwd 1,4-BETA-N-ACETYLMUR
AMIDASE

(Streptococcus
pneumoniae)
4 / 4 TRP A  99
TRP A 108
TYR A 130
MET A 138
CHT  A 704 (-3.7A)
CHT  A 704 (-3.6A)
CHT  A 704 (-4.6A)
CHT  A 704 (-3.4A)
0.31A 2x8oA-2wwdA:
10.6
2x8oA-2wwdA:
22.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
2wwd 1,4-BETA-N-ACETYLMUR
AMIDASE

(Streptococcus
pneumoniae)
4 / 4 TRP A 122
TRP A 129
TYR A 147
MET A 155
CHT  A 705 ( 3.7A)
CHT  A 705 (-4.1A)
CHT  A 705 ( 4.0A)
CHT  A 705 ( 4.1A)
0.80A 2x8oA-2wwdA:
10.6
2x8oA-2wwdA:
22.36
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
2x8p CHOLINE-BINDING
PROTEIN F

(Streptococcus
pneumoniae)
4 / 4 TRP A 130
TRP A 137
TYR A 182
MET A 190
CHT  A1321 (-4.0A)
CHT  A1321 (-3.9A)
None
CHT  A1321 (-3.5A)
0.22A 2x8oA-2x8pA:
37.2
2x8oA-2x8pA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
2x8p CHOLINE-BINDING
PROTEIN F

(Streptococcus
pneumoniae)
4 / 4 TRP A 214
TRP A 221
TYR A 243
MET A 251
CHT  A1320 (-3.8A)
CHT  A1320 (-3.6A)
None
CHT  A1320 ( 4.6A)
0.18A 2x8oA-2x8pA:
37.2
2x8oA-2x8pA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
2x8p CHOLINE-BINDING
PROTEIN F

(Streptococcus
pneumoniae)
4 / 4 TRP A 235
TRP A 242
TYR A 263
MET A 272
CHT  A1319 (-3.6A)
CHT  A1319 (-3.9A)
None
CHT  A1319 ( 4.5A)
0.26A 2x8oA-2x8pA:
37.2
2x8oA-2x8pA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
4cnl PUTATIVE
PNEUMOCOCCAL SURFACE
PROTEIN

(Streptococcus
pneumoniae)
4 / 4 TRP A  96
TRP A 103
TYR A 121
MET A 129
CHT  A1276 (-3.3A)
CHT  A1276 ( 3.9A)
CHT  A1276 ( 3.8A)
CHT  A1276 ( 3.7A)
0.60A 2x8oA-4cnlA:
10.9
2x8oA-4cnlA:
29.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
4cnl PUTATIVE
PNEUMOCOCCAL SURFACE
PROTEIN

(Streptococcus
pneumoniae)
4 / 4 TRP A 134
TRP A 143
TYR A 161
MET A 169
CHT  A1280 (-3.4A)
CHT  A1280 ( 3.7A)
CHT  A1280 (-3.6A)
CHT  A1280 (-3.6A)
0.77A 2x8oA-4cnlA:
10.9
2x8oA-4cnlA:
29.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
4cnl PUTATIVE
PNEUMOCOCCAL SURFACE
PROTEIN

(Streptococcus
pneumoniae)
4 / 4 TRP A 174
TRP A 183
TYR A 201
MET A 209
CHT  A1274 (-3.2A)
CHT  A1274 (-3.6A)
CHT  A1274 (-3.5A)
CHT  A1274 (-3.4A)
0.73A 2x8oA-4cnlA:
10.9
2x8oA-4cnlA:
29.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
4cnl PUTATIVE
PNEUMOCOCCAL SURFACE
PROTEIN

(Streptococcus
pneumoniae)
4 / 4 TRP A 214
TRP A 223
TYR A 241
MET A 249
CHT  A1275 (-3.5A)
CHT  A1275 (-3.6A)
CHT  A1275 (-3.7A)
CHT  A1275 (-3.6A)
0.78A 2x8oA-4cnlA:
10.9
2x8oA-4cnlA:
29.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
4iwt LYTIC AMIDASE
(Streptococcus
pneumoniae)
4 / 4 TRP A 220
TRP A 228
TYR A 249
MET A 257
CHT  A 401 (-3.5A)
CHT  A 401 (-3.9A)
None
CHT  A 401 ( 4.4A)
0.38A 2x8oA-4iwtA:
7.2
2x8oA-4iwtA:
24.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
4iwt LYTIC AMIDASE
(Streptococcus
pneumoniae)
4 / 4 TRP A 241
TRP A 248
TYR A 269
MET A 278
CHT  A 402 (-3.5A)
CHT  A 402 (-3.7A)
CHT  A 402 (-4.2A)
CHT  A 402 ( 3.8A)
0.74A 2x8oA-4iwtA:
7.2
2x8oA-4iwtA:
24.76
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
4x36 AUTOLYSIN
(Streptococcus
pneumoniae)
4 / 4 TRP A 220
TRP A 228
TYR A 249
MET A 257
CHT  A 408 (-3.7A)
CHT  A 408 (-3.5A)
CHT  A 408 ( 4.7A)
CHT  A 408 ( 3.7A)
0.36A 2x8oA-4x36A:
6.9
2x8oA-4x36A:
30.64
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X8O_A_OINA1317_1
(CHOLINE-BINDING
PROTEIN F)
4x36 AUTOLYSIN
(Streptococcus
pneumoniae)
4 / 4 TRP A 241
TRP A 248
TYR A 269
MET A 278
CHT  A 409 ( 3.7A)
CHT  A 409 (-3.8A)
CHT  A 409 (-4.0A)
CHT  A 409 ( 4.1A)
0.97A 2x8oA-4x36A:
6.9
2x8oA-4x36A:
30.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8P_A_OINA1313_1
(CHOLINE-BINDING
PROTEIN F)
1h8g MAJOR AUTOLYSIN
(Streptococcus
pneumoniae)
4 / 4 TRP A 241
LYS A 243
TRP A 248
TYR A 269
CHT  A 402 ( 4.2A)
None
CHT  A 402 (-3.8A)
CHT  A 402 (-4.9A)
0.38A 2x8pA-1h8gA:
5.8
2x8pA-1h8gA:
15.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8P_A_OINA1313_1
(CHOLINE-BINDING
PROTEIN F)
4cnl PUTATIVE
PNEUMOCOCCAL SURFACE
PROTEIN

(Streptococcus
pneumoniae)
4 / 4 TRP A  96
LYS A  98
TRP A 103
TYR A 121
CHT  A1276 (-3.3A)
None
CHT  A1276 ( 3.9A)
CHT  A1276 ( 3.8A)
0.73A 2x8pA-4cnlA:
11.7
2x8pA-4cnlA:
29.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X8P_A_OINA1313_1
(CHOLINE-BINDING
PROTEIN F)
4iwt LYTIC AMIDASE
(Streptococcus
pneumoniae)
4 / 4 TRP A 220
LYS A 222
TRP A 228
TYR A 249
CHT  A 401 (-3.5A)
None
CHT  A 401 (-3.9A)
None
0.38A 2x8pA-4iwtA:
7.4
2x8pA-4iwtA:
24.76
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2X8P_A_OINA1313_1
(CHOLINE-BINDING
PROTEIN F)
4x36 AUTOLYSIN
(Streptococcus
pneumoniae)
4 / 4 TRP A 220
LYS A 222
TRP A 228
TYR A 249
CHT  A 408 (-3.7A)
None
CHT  A 408 (-3.5A)
CHT  A 408 ( 4.7A)
0.40A 2x8pA-4x36A:
9.0
2x8pA-4x36A:
30.64
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3MES_A_DMEA427_1
(CHOLINE KINASE)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
8 / 10 ASP A 218
GLN A 220
GLU A 254
TYR A 259
TRP A 322
TRP A 325
PHE A 339
TYR A 344
CHT  A1001 (-2.8A)
CHT  A1001 (-3.2A)
CA  A 371 ( 3.4A)
CHT  A1001 ( 4.6A)
CHT  A1001 (-4.3A)
CHT  A1001 (-4.1A)
None
None
0.78A 3mesA-3c5iA:
38.7
3mesA-3c5iA:
35.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3MES_A_DMEA427_1
(CHOLINE KINASE)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
7 / 10 GLN A 220
ASN A 222
GLU A 254
TYR A 259
TRP A 322
PHE A 339
TYR A 344
CHT  A1001 (-3.2A)
MG  A 370 ( 4.4A)
CA  A 371 ( 3.4A)
CHT  A1001 ( 4.6A)
CHT  A1001 (-4.3A)
None
None
1.02A 3mesA-3c5iA:
38.7
3mesA-3c5iA:
35.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MES_A_DMEA427_1
(CHOLINE KINASE)
4r7b CHOLINE KINASE
(Streptococcus
pneumoniae)
5 / 10 ASP A 176
GLU A 213
TRP A 251
TRP A 254
TYR A 268
CHT  A 301 (-2.8A)
CHT  A 301 (-4.2A)
CHT  A 301 ( 3.6A)
CHT  A 301 (-3.9A)
None
0.79A 3mesA-4r7bA:
23.2
3mesA-4r7bA:
29.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3MES_B_DMEB427_1
(CHOLINE KINASE)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
8 / 10 ASP A 218
GLN A 220
GLU A 254
TYR A 259
TRP A 322
TRP A 325
PHE A 339
TYR A 344
CHT  A1001 (-2.8A)
CHT  A1001 (-3.2A)
CA  A 371 ( 3.4A)
CHT  A1001 ( 4.6A)
CHT  A1001 (-4.3A)
CHT  A1001 (-4.1A)
None
None
0.78A 3mesB-3c5iA:
38.7
3mesB-3c5iA:
35.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3MES_B_DMEB427_1
(CHOLINE KINASE)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
7 / 10 GLN A 220
ASN A 222
GLU A 254
TYR A 259
TRP A 322
PHE A 339
TYR A 344
CHT  A1001 (-3.2A)
MG  A 370 ( 4.4A)
CA  A 371 ( 3.4A)
CHT  A1001 ( 4.6A)
CHT  A1001 (-4.3A)
None
None
1.03A 3mesB-3c5iA:
38.7
3mesB-3c5iA:
35.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MES_B_DMEB427_1
(CHOLINE KINASE)
4r7b CHOLINE KINASE
(Streptococcus
pneumoniae)
5 / 10 ASP A 176
GLU A 213
TRP A 251
TRP A 254
TYR A 268
CHT  A 301 (-2.8A)
CHT  A 301 (-4.2A)
CHT  A 301 ( 3.6A)
CHT  A 301 (-3.9A)
None
0.82A 3mesB-4r7bA:
23.1
3mesB-4r7bA:
29.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N9J_A_EAAA210_1
(GLUTATHIONE
S-TRANSFERASE P)
4r7b CHOLINE KINASE
(Streptococcus
pneumoniae)
4 / 8 TRP A 251
ILE A 144
TYR A 146
GLY A 269
CHT  A 301 ( 3.6A)
None
None
None
0.93A 3n9jA-4r7bA:
undetectable
3n9jA-4r7bA:
21.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZZC_A_ACTA401_0
(PROTON-GATED ION
CHANNEL)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
4 / 6 ILE A 269
ARG A 348
ILE A 253
GLU A 254
None
CHT  A1001 ( 4.8A)
GOL  A1003 (-4.3A)
CA  A 371 ( 3.4A)
1.20A 4zzcA-3c5iA:
2.3
4zzcB-3c5iA:
2.3
4zzcA-3c5iA:
23.33
4zzcB-3c5iA:
23.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZZC_B_ACTB401_0
(PROTON-GATED ION
CHANNEL)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
4 / 6 ILE A 269
ARG A 348
ILE A 253
GLU A 254
None
CHT  A1001 ( 4.8A)
GOL  A1003 (-4.3A)
CA  A 371 ( 3.4A)
1.16A 4zzcB-3c5iA:
2.3
4zzcC-3c5iA:
2.6
4zzcB-3c5iA:
23.33
4zzcC-3c5iA:
23.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DWD_C_GLYC713_0
(DEOXYNUCLEOSIDE
TRIPHOSPHATE
TRIPHOSPHOHYDROLASE
SAMHD1)
3c5i CHOLINE KINASE
(Plasmodium
knowlesi)
3 / 3 GLN A 220
TYR A 259
ASN A 222
CHT  A1001 (-3.2A)
CHT  A1001 ( 4.6A)
MG  A 370 ( 4.4A)
0.99A 6dwdC-3c5iA:
undetectable
6dwdC-3c5iA:
20.67