SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'CBD'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2QWX_A_ML1A233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		4 / 8 TRP A 105
PHE A 106
GLY A 149
MET A 154
 DQN  A 276 ( 3.6A)
DQN  A 276 ( 4.2A)
CBD  A 275 ( 3.7A)
CBD  A 275 ( 4.4A)
 0.45A 2qwxA-1qrdA:
29.6
2qwxB-1qrdA:
29.7		 2qwxA-1qrdA:
41.88
2qwxB-1qrdA:
41.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2QX4_A_ML1A233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		5 / 8 TRP A 105
PHE A 106
GLY A 149
GLY A 150
MET A 154
 DQN  A 276 ( 3.6A)
DQN  A 276 ( 4.2A)
CBD  A 275 ( 3.7A)
FAD  A 274 (-3.7A)
CBD  A 275 ( 4.4A)
 0.46A 2qx4A-1qrdA:
29.7
2qx4B-1qrdA:
29.7		 2qx4A-1qrdA:
41.88
2qx4B-1qrdA:
41.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3FW1_A_STIA233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		6 / 10 TRP A 105
PHE A 106
GLY A 149
GLY A 150
MET A 154
TYR A 155
 DQN  A 276 ( 3.6A)
DQN  A 276 ( 4.2A)
CBD  A 275 ( 3.7A)
FAD  A 274 (-3.7A)
CBD  A 275 ( 4.4A)
None
 0.48A 3fw1A-1qrdA:
29.6		 3fw1A-1qrdA:
41.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3OWX_A_XRAA233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		6 / 9 TRP A 105
GLY A 149
GLY A 150
MET A 154
TYR A 155
VAL A 160
 DQN  A 276 ( 3.6A)
CBD  A 275 ( 3.7A)
FAD  A 274 (-3.7A)
CBD  A 275 ( 4.4A)
None
None
 0.55A 3owxA-1qrdA:
29.6		 3owxA-1qrdA:
41.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3OWX_B_XRAB233_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		5 / 11 TRP A 105
GLY A 149
GLY A 150
MET A 154
TYR A 155
 DQN  A 276 ( 3.6A)
CBD  A 275 ( 3.7A)
FAD  A 274 (-3.7A)
CBD  A 275 ( 4.4A)
None
 0.41A 3owxA-1qrdA:
29.6
3owxB-1qrdA:
29.6		 3owxA-1qrdA:
41.88
3owxB-1qrdA:
41.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4FGK_A_0TXA302_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		5 / 7 TRP A 105
GLY A 149
GLY A 150
MET A 154
TYR A 155
 DQN  A 276 ( 3.6A)
CBD  A 275 ( 3.7A)
FAD  A 274 (-3.7A)
CBD  A 275 ( 4.4A)
None
 0.44A 4fgkB-1qrdA:
29.6		 4fgkB-1qrdA:
41.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4QOG_A_ML1A302_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		4 / 8 TRP A 105
PHE A 106
GLY A 149
MET A 154
 DQN  A 276 ( 3.6A)
DQN  A 276 ( 4.2A)
CBD  A 275 ( 3.7A)
CBD  A 275 ( 4.4A)
 0.45A 4qogA-1qrdA:
29.6
4qogB-1qrdA:
29.2		 4qogA-1qrdA:
41.88
4qogB-1qrdA:
41.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LBT_A_6T0A303_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		5 / 10 TRP A 105
GLY A 149
GLY A 150
MET A 154
TYR A 155
 DQN  A 276 ( 3.6A)
CBD  A 275 ( 3.7A)
FAD  A 274 (-3.7A)
CBD  A 275 ( 4.4A)
None
 0.47A 5lbtA-1qrdA:
29.5
5lbtB-1qrdA:
29.1		 5lbtA-1qrdA:
45.25
5lbtB-1qrdA:
45.25
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5LBT_A_6T0A304_1
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])		 1qrd QUINONE-REDUCTASE
(Rattus
rattus) 		5 / 10 TRP A 105
GLY A 149
GLY A 150
MET A 154
TYR A 155
 DQN  A 276 ( 3.6A)
CBD  A 275 ( 3.7A)
FAD  A 274 (-3.7A)
CBD  A 275 ( 4.4A)
None
 0.46A 5lbtA-1qrdA:
29.5
5lbtB-1qrdA:
29.1		 5lbtA-1qrdA:
45.25
5lbtB-1qrdA:
45.25