SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'BRF'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X2N_B_X2NB1479_1
(LANOSTEROL
14-ALPHA-DEMETHYLASE)
1uuo DIHYDROOROTATE
DEHYDROGENASE

(Rattus
rattus)
5 / 12 MET A  43
ALA A  55
ALA A  59
THR A  63
LEU A 111
BRF  A1397 (-4.1A)
BRF  A1397 (-3.2A)
BRF  A1397 (-3.5A)
BRF  A1397 ( 4.7A)
None
1.07A 2x2nB-1uuoA:
undetectable
2x2nB-1uuoA:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X2N_C_X2NC1479_1
(LANOSTEROL
14-ALPHA-DEMETHYLASE)
1uuo DIHYDROOROTATE
DEHYDROGENASE

(Rattus
rattus)
5 / 12 MET A  43
ALA A  55
ALA A  59
THR A  63
LEU A 111
BRF  A1397 (-4.1A)
BRF  A1397 (-3.2A)
BRF  A1397 (-3.5A)
BRF  A1397 ( 4.7A)
None
1.06A 2x2nC-1uuoA:
undetectable
2x2nC-1uuoA:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X2N_D_X2ND1479_1
(LANOSTEROL
14-ALPHA-DEMETHYLASE)
1uuo DIHYDROOROTATE
DEHYDROGENASE

(Rattus
rattus)
5 / 12 MET A  43
ALA A  55
ALA A  59
THR A  63
LEU A 111
BRF  A1397 (-4.1A)
BRF  A1397 (-3.2A)
BRF  A1397 (-3.5A)
BRF  A1397 ( 4.7A)
None
1.05A 2x2nD-1uuoA:
0.0
2x2nD-1uuoA:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VW7_A_VPXA2001_1
(PROTEINASE-ACTIVATED
RECEPTOR 1, LYSOZYME)
1uuo DIHYDROOROTATE
DEHYDROGENASE

(Rattus
rattus)
5 / 12 LEU A  67
PHE A  37
LEU A  42
TYR A  38
ALA A  55
None
None
BRF  A1397 (-4.6A)
None
BRF  A1397 (-3.2A)
1.09A 3vw7A-1uuoA:
undetectable
3vw7A-1uuoA:
21.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4JX1_B_CAMB502_0
(CAMPHOR
5-MONOOXYGENASE)
1uuo DIHYDROOROTATE
DEHYDROGENASE

(Rattus
rattus)
6 / 10 PHE A  98
THR A  63
LEU A  68
VAL A 116
ASP A  99
ILE A  94
None
BRF  A1397 ( 4.7A)
None
None
None
None
1.32A 4jx1B-1uuoA:
undetectable
4jx1B-1uuoA:
22.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5K9D_A_CE9A402_0
(DIHYDROOROTATE
DEHYDROGENASE
(QUINONE),
MITOCHONDRIAL)
1uuo DIHYDROOROTATE
DEHYDROGENASE

(Rattus
rattus)
10 / 12 MET A  43
ALA A  55
HIS A  56
LEU A  58
ALA A  59
THR A  63
PHE A  98
TYR A 356
LEU A 359
PRO A 364
BRF  A1397 (-4.1A)
BRF  A1397 (-3.2A)
BRF  A1397 (-4.0A)
None
BRF  A1397 (-3.5A)
BRF  A1397 ( 4.7A)
None
FMN  A1398 ( 4.2A)
None
BRF  A1397 (-4.6A)
0.64A 5k9dA-1uuoA:
60.9
5k9dA-1uuoA:
87.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6AY4_A_TPFA506_1
(CYP51, STEROL
14ALPHA-DEMETHYLASE)
1uuo DIHYDROOROTATE
DEHYDROGENASE

(Rattus
rattus)
5 / 10 MET A  43
ALA A  55
ALA A  59
THR A  63
LEU A 111
BRF  A1397 (-4.1A)
BRF  A1397 (-3.2A)
BRF  A1397 (-3.5A)
BRF  A1397 ( 4.7A)
None
1.08A 6ay4A-1uuoA:
undetectable
6ay4A-1uuoA:
20.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6AYC_A_1YNA502_1
(PROTEIN CYP51)
1uuo DIHYDROOROTATE
DEHYDROGENASE

(Rattus
rattus)
5 / 12 MET A  43
ALA A  55
ALA A  59
THR A  63
LEU A 111
BRF  A1397 (-4.1A)
BRF  A1397 (-3.2A)
BRF  A1397 (-3.5A)
BRF  A1397 ( 4.7A)
None
1.07A 6aycA-1uuoA:
undetectable
6aycA-1uuoA:
16.36