SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'BMD'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1NX9_A_AICA5001_1 (ALPHA-AMINO ACID ESTER HYDROLASE)	1qnl	ALIPHATIC AMIDASE EXPRESSION-REGULATIN G PROTEIN (Pseudomonas aeruginosa)	4 / 8	TYR A 83 TYR A 104 GLU A 24 TYR A 180	BMD A1001 (-3.0A) None None None	1.06A	1nx9A-1qnlA: 2.1	1nx9A-1qnlA: 20.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1NX9_B_AICB5002_1 (ALPHA-AMINO ACID ESTER HYDROLASE)	1qnl	ALIPHATIC AMIDASE EXPRESSION-REGULATIN G PROTEIN (Pseudomonas aeruginosa)	4 / 8	TYR A 83 TYR A 104 GLU A 24 TYR A 180	BMD A1001 (-3.0A) None None None	1.07A	1nx9B-1qnlA: undetectable	1nx9B-1qnlA: 20.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1NX9_C_AICC5003_1 (ALPHA-AMINO ACID ESTER HYDROLASE)	1qnl	ALIPHATIC AMIDASE EXPRESSION-REGULATIN G PROTEIN (Pseudomonas aeruginosa)	4 / 8	TYR A 83 TYR A 104 GLU A 24 TYR A 180	BMD A1001 (-3.0A) None None None	1.07A	1nx9C-1qnlA: undetectable	1nx9C-1qnlA: 20.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1NX9_D_AICD5004_1 (ALPHA-AMINO ACID ESTER HYDROLASE)	1qnl	ALIPHATIC AMIDASE EXPRESSION-REGULATIN G PROTEIN (Pseudomonas aeruginosa)	4 / 8	TYR A 83 TYR A 104 GLU A 24 TYR A 180	BMD A1001 (-3.0A) None None None	1.08A	1nx9D-1qnlA: undetectable	1nx9D-1qnlA: 20.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5X6Y_A_SAMA901_0 (MRNA CAPPING ENZYME P5)	1qnl	ALIPHATIC AMIDASE EXPRESSION-REGULATIN G PROTEIN (Pseudomonas aeruginosa)	5 / 11	VAL A 206 GLY A 207 GLU A 238 SER A 235 ASN A 106	None None None None BMD A1001 ( 4.0A)	1.02A	5x6yA-1qnlA: 2.2	5x6yA-1qnlA: 18.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5X6Y_C_SAMC901_0 (MRNA CAPPING ENZYME P5)	1qnl	ALIPHATIC AMIDASE EXPRESSION-REGULATIN G PROTEIN (Pseudomonas aeruginosa)	5 / 11	VAL A 206 GLY A 207 GLU A 238 SER A 235 ASN A 106	None None None None BMD A1001 ( 4.0A)	1.18A	5x6yC-1qnlA: 3.2	5x6yC-1qnlA: 18.73

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1NX9_A_AICA5001_1","ALPHA-AMINO ACID ESTER HYDROLASE","1qnl","ALIPHATIC AMIDASE EXPRESSION-REGULATING PROTEIN","Pseudomonas aeruginosa",4,"TYR A  83;TYR A 104;GLU A  24;TYR A 180","BMD A1001 (-3.0A);None;None;None","1.06A","1nx9A-1qnlA:2.1",null],["1NX9_B_AICB5002_1","ALPHA-AMINO ACID ESTER HYDROLASE","1qnl","ALIPHATIC AMIDASE EXPRESSION-REGULATING PROTEIN","Pseudomonas aeruginosa",4,"TYR A  83;TYR A 104;GLU A  24;TYR A 180","BMD A1001 (-3.0A);None;None;None","1.07A","1nx9B-1qnlA:undetectable","1nx9A-1qnlA:20.54"],["1NX9_C_AICC5003_1","ALPHA-AMINO ACID ESTER HYDROLASE","1qnl","ALIPHATIC AMIDASE EXPRESSION-REGULATING PROTEIN","Pseudomonas aeruginosa",4,"TYR A  83;TYR A 104;GLU A  24;TYR A 180","BMD A1001 (-3.0A);None;None;None","1.07A","1nx9C-1qnlA:undetectable","1nx9B-1qnlA:20.54"],["1NX9_D_AICD5004_1","ALPHA-AMINO ACID ESTER HYDROLASE","1qnl","ALIPHATIC AMIDASE EXPRESSION-REGULATING PROTEIN","Pseudomonas aeruginosa",4,"TYR A  83;TYR A 104;GLU A  24;TYR A 180","BMD A1001 (-3.0A);None;None;None","1.08A","1nx9D-1qnlA:undetectable","1nx9C-1qnlA:20.54"],["5X6Y_A_SAMA901_0","MRNA CAPPING ENZYME P5","1qnl","ALIPHATIC AMIDASE EXPRESSION-REGULATING PROTEIN","Pseudomonas aeruginosa",5,"VAL A 206;GLY A 207;GLU A 238;SER A 235;ASN A 106","None;None;None;None;BMD A1001 ( 4.0A)","1.02A","5x6yA-1qnlA:2.2","1nx9D-1qnlA:20.54"],["5X6Y_C_SAMC901_0","MRNA CAPPING ENZYME P5","1qnl","ALIPHATIC AMIDASE EXPRESSION-REGULATING PROTEIN","Pseudomonas aeruginosa",5,"VAL A 206;GLY A 207;GLU A 238;SER A 235;ASN A 106","None;None;None;None;BMD A1001 ( 4.0A)","1.18A","5x6yC-1qnlA:3.2","5x6yA-1qnlA:18.73"]]