SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'B2M'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SQF_A_SAMA430_0
(SUN PROTEIN)
3dho STREPTOGRAMIN A
ACETYLTRANSFERASE

(Enterococcus
faecium)
5 / 12 ALA A 156
GLY A 157
GLY A 158
ASP A 136
GLY A 117
None
B2M  A 302 (-3.5A)
B2M  A 302 (-4.0A)
None
None
0.99A 1sqfA-3dhoA:
undetectable
1sqfA-3dhoA:
18.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DT8_A_ADNA401_1
(APH(2'')-ID)
3dho STREPTOGRAMIN A
ACETYLTRANSFERASE

(Enterococcus
faecium)
5 / 11 GLY A 157
ALA A 156
ILE A 150
ILE A 116
ILE A 122
B2M  A 302 (-3.5A)
None
None
None
None
1.10A 4dt8A-3dhoA:
undetectable
4dt8A-3dhoA:
22.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J5J_B_478B401_2
(PROTEASE)
3dho STREPTOGRAMIN A
ACETYLTRANSFERASE

(Enterococcus
faecium)
5 / 10 ILE A 134
VAL A 146
GLY A 157
ILE A 164
VAL A 120
None
None
B2M  A 302 (-3.5A)
B2M  A 302 ( 4.0A)
None
1.08A 4j5jB-3dhoA:
undetectable
4j5jB-3dhoA:
21.72