SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'AVU'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1ISM_A_NCAA303_0
(BONE MARROW STROMAL
CELL ANTIGEN 1)
3p5s CD38 MOLECULE
(Bos
taurus)
6 / 9 TRP A 118
LEU A 137
ASP A 147
TRP A 181
SER A 185
GLU A 218
AVU  A 280 (-3.8A)
AVU  A 280 (-3.7A)
AVU  A 280 (-3.9A)
AVU  A 280 (-3.6A)
AVU  A 280 (-2.9A)
AVU  A 280 (-2.4A)
0.44A 1ismA-3p5sA:
27.3
1ismA-3p5sA:
33.71
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1ISM_B_NCAB305_0
(BONE MARROW STROMAL
CELL ANTIGEN 1)
3p5s CD38 MOLECULE
(Bos
taurus)
4 / 7 TRP A 118
LEU A 137
ASP A 147
TRP A 181
AVU  A 280 (-3.8A)
AVU  A 280 (-3.7A)
AVU  A 280 (-3.9A)
AVU  A 280 (-3.6A)
0.35A 1ismB-3p5sA:
27.4
1ismB-3p5sA:
33.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R15_C_NCAC439_0
(ADP-RIBOSYL CYCLASE)
3p5s CD38 MOLECULE
(Bos
taurus)
3 / 3 TRP A 151
PHE A 180
TRP A 181
None
None
AVU  A 280 (-3.6A)
0.31A 1r15C-3p5sA:
26.1
1r15C-3p5sA:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R15_F_NCAF469_0
(ADP-RIBOSYL CYCLASE)
3p5s CD38 MOLECULE
(Bos
taurus)
3 / 3 TRP A 151
PHE A 180
TRP A 181
None
None
AVU  A 280 (-3.6A)
0.29A 1r15F-3p5sA:
26.1
1r15F-3p5sA:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R15_G_NCAG479_0
(ADP-RIBOSYL CYCLASE)
3p5s CD38 MOLECULE
(Bos
taurus)
3 / 3 TRP A 151
PHE A 180
TRP A 181
None
None
AVU  A 280 (-3.6A)
0.30A 1r15G-3p5sA:
26.1
1r15G-3p5sA:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1R15_H_NCAH489_0
(ADP-RIBOSYL CYCLASE)
3p5s CD38 MOLECULE
(Bos
taurus)
3 / 3 TRP A 151
PHE A 180
TRP A 181
None
None
AVU  A 280 (-3.6A)
0.31A 1r15H-3p5sA:
26.0
1r15H-3p5sA:
28.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZBZ_A_VDXA501_1
(CYTOCHROME P450-SU1)
3p5s CD38 MOLECULE
(Bos
taurus)
5 / 11 THR A 195
VAL A 198
SER A 119
LEU A 252
ILE A 249
None
None
AVU  A 280 (-2.9A)
None
None
1.21A 2zbzA-3p5sA:
undetectable
2zbzA-3p5sA:
19.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CV9_A_VDXA501_1
(CYTOCHROME P450-SU1)
3p5s CD38 MOLECULE
(Bos
taurus)
5 / 9 THR A 195
VAL A 198
SER A 119
LEU A 252
ILE A 249
None
None
AVU  A 280 (-2.9A)
None
None
1.28A 3cv9A-3p5sA:
undetectable
3cv9A-3p5sA:
19.54
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3DZG_A_NCAA302_0
(ADP-RIBOSYL CYCLASE
1)
3p5s CD38 MOLECULE
(Bos
taurus)
6 / 7 TRP A 118
LEU A 137
GLU A 138
ASP A 147
TRP A 181
SER A 185
AVU  A 280 (-3.8A)
AVU  A 280 (-3.7A)
AVU  A 280 (-3.3A)
AVU  A 280 (-3.9A)
AVU  A 280 (-3.6A)
AVU  A 280 (-2.9A)
0.47A 3dzgA-3p5sA:
30.3
3dzgA-3p5sA:
46.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3DZG_A_NCAA302_0
(ADP-RIBOSYL CYCLASE
1)
3p5s CD38 MOLECULE
(Bos
taurus)
6 / 7 TRP A 118
LYS A 122
LEU A 137
ASP A 147
TRP A 181
SER A 185
AVU  A 280 (-3.8A)
AVU  A 280 (-3.5A)
AVU  A 280 (-3.7A)
AVU  A 280 (-3.9A)
AVU  A 280 (-3.6A)
AVU  A 280 (-2.9A)
0.81A 3dzgA-3p5sA:
30.3
3dzgA-3p5sA:
46.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3DZG_B_NCAB302_0
(ADP-RIBOSYL CYCLASE
1)
3p5s CD38 MOLECULE
(Bos
taurus)
6 / 7 TRP A 118
LEU A 137
GLU A 138
ASP A 147
TRP A 181
SER A 185
AVU  A 280 (-3.8A)
AVU  A 280 (-3.7A)
AVU  A 280 (-3.3A)
AVU  A 280 (-3.9A)
AVU  A 280 (-3.6A)
AVU  A 280 (-2.9A)
0.50A 3dzgB-3p5sA:
30.4
3dzgB-3p5sA:
46.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3I9J_B_NCAB302_0
(ADP-RIBOSYL CYCLASE)
3p5s CD38 MOLECULE
(Bos
taurus)
4 / 6 LEU A 137
GLU A 138
TRP A 181
SER A 185
AVU  A 280 (-3.7A)
AVU  A 280 (-3.3A)
AVU  A 280 (-3.6A)
AVU  A 280 (-2.9A)
0.30A 3i9jB-3p5sA:
25.3
3i9jB-3p5sA:
28.32
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ROP_A_NCAA302_0
(ADP-RIBOSYL CYCLASE
1)
3p5s CD38 MOLECULE
(Bos
taurus)
5 / 6 TRP A 118
LEU A 137
GLU A 138
TRP A 181
SER A 185
AVU  A 280 (-3.8A)
AVU  A 280 (-3.7A)
AVU  A 280 (-3.3A)
AVU  A 280 (-3.6A)
AVU  A 280 (-2.9A)
0.35A 3ropA-3p5sA:
30.4
3ropA-3p5sA:
41.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JMN_B_FUAB1101_1
(MULTIDRUG EFFLUX
PUMP SUBUNIT ACRB)
3p5s CD38 MOLECULE
(Bos
taurus)
4 / 5 ILE A 249
LEU A 204
LYS A 120
VAL A 198
None
NAG  A 501 ( 4.9A)
AVU  A 280 ( 2.5A)
None
1.14A 5jmnB-3p5sA:
undetectable
5jmnB-3p5sA:
12.99