SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'APW'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DMA_B_NCAB700_0
(EXOTOXIN A)
2dej PROBABLE
GALACTOKINASE

(Pyrococcus
horikoshii)
4 / 6 GLY A 111
TYR A  70
ALA A 133
GLU A 137
None
APW  A 402 (-3.8A)
None
APW  A 402 ( 4.8A)
0.86A 1dmaB-2dejA:
undetectable
1dmaB-2dejA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2C8A_A_NCAA1252_0
(MONO-ADP-RIBOSYLTRAN
SFERASE C3)
2dej PROBABLE
GALACTOKINASE

(Pyrococcus
horikoshii)
4 / 7 SER A 105
ARG A   9
GLN A 150
GLU A 109
APW  A 402 (-2.2A)
GLA  A 401 (-4.1A)
None
None
1.08A 2c8aA-2dejA:
undetectable
2c8aA-2dejA:
21.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3J6P_B_TA1B502_1
(TUBULIN BETA CHAIN)
2dej PROBABLE
GALACTOKINASE

(Pyrococcus
horikoshii)
5 / 12 GLU A 137
LEU A 300
SER A 105
GLY A 146
LEU A 148
APW  A 402 ( 4.8A)
None
APW  A 402 (-2.2A)
GLA  A 401 (-3.4A)
GLA  A 401 ( 4.3A)
1.21A 3j6pB-2dejA:
undetectable
3j6pB-2dejA:
24.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HYF_A_NCAA1201_0
(TANKYRASE-2)
2dej PROBABLE
GALACTOKINASE

(Pyrococcus
horikoshii)
4 / 7 GLY A 111
TYR A  70
ALA A 133
GLU A 137
None
APW  A 402 (-3.8A)
None
APW  A 402 ( 4.8A)
0.82A 4hyfA-2dejA:
undetectable
4hyfA-2dejA:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HYF_B_NCAB1201_0
(TANKYRASE-2)
2dej PROBABLE
GALACTOKINASE

(Pyrococcus
horikoshii)
4 / 8 GLY A 111
TYR A  70
ALA A 133
GLU A 137
None
APW  A 402 (-3.8A)
None
APW  A 402 ( 4.8A)
0.80A 4hyfB-2dejA:
undetectable
4hyfB-2dejA:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HYF_C_NCAC1201_0
(TANKYRASE-2)
2dej PROBABLE
GALACTOKINASE

(Pyrococcus
horikoshii)
4 / 8 GLY A 111
TYR A  70
ALA A 133
GLU A 137
None
APW  A 402 (-3.8A)
None
APW  A 402 ( 4.8A)
0.83A 4hyfC-2dejA:
undetectable
4hyfC-2dejA:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NZY_A_CE3A1103_1
(DNA CROSS-LINK
REPAIR 1A PROTEIN)
2dej PROBABLE
GALACTOKINASE

(Pyrococcus
horikoshii)
4 / 8 TYR A  70
ASP A 149
VAL A 141
GLY A 142
APW  A 402 (-3.8A)
GLA  A 401 (-3.1A)
None
None
1.03A 5nzyA-2dejA:
undetectable
5nzyA-2dejA:
24.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CDU_G_EY4G502_0
(CHIMERIC ALPHA1GABAA
RECEPTOR)
2dej PROBABLE
GALACTOKINASE

(Pyrococcus
horikoshii)
4 / 8 ILE A   2
ILE A  35
THR A  33
TYR A  32
None
None
APW  A 402 ( 4.4A)
None
0.78A 6cduG-2dejA:
undetectable
6cduH-2dejA:
2.0
6cduG-2dejA:
22.88
6cduH-2dejA:
22.88