SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'ALO'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_A_FFOA1002_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.77A 1dfoA-2vmxA:
61.2
1dfoA-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_A_FFOA1002_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
PRO A 350
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.66A 1dfoA-2vmxA:
61.2
1dfoA-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_A_FFOA1002_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 LEU A 117
GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
None
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
1.33A 1dfoA-2vmxA:
61.2
1dfoA-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_B_FFOB2002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.77A 1dfoB-2vmxA:
62.3
1dfoB-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_B_FFOB2002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
PRO A 350
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.66A 1dfoB-2vmxA:
62.3
1dfoB-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_B_FFOB2002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 LEU A 117
GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
None
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
1.33A 1dfoB-2vmxA:
62.3
1dfoB-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_C_FFOC3002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.77A 1dfoC-2vmxA:
62.2
1dfoC-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_C_FFOC3002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
PRO A 350
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.66A 1dfoC-2vmxA:
62.2
1dfoC-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_C_FFOC3002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 LEU A 117
GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
None
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
1.32A 1dfoC-2vmxA:
62.2
1dfoC-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_D_FFOD4002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.77A 1dfoD-2vmxA:
61.2
1dfoD-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_D_FFOD4002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
PRO A 350
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.66A 1dfoD-2vmxA:
61.2
1dfoD-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1DFO_D_FFOD4002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 LEU A 117
GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
None
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
1.33A 1dfoD-2vmxA:
61.2
1dfoD-2vmxA:
59.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_A_FFOA1293_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.79A 1eqbA-2vmxA:
61.0
1eqbA-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_A_FFOA1293_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
PRO A 350
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.66A 1eqbA-2vmxA:
61.0
1eqbA-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_A_GLYA1292_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 8 SER A  31
HIS A 122
SER A 172
HIS A 200
LYS A 226
ARG A 357
ALO  A 502 (-2.7A)
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
ALO  A 502 ( 3.9A)
PLP  A 501 ( 3.6A)
ALO  A 502 (-3.0A)
0.50A 1eqbA-2vmxA:
61.0
1eqbB-2vmxA:
62.1
1eqbA-2vmxA:
58.85
1eqbB-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_B_FFOB2293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.79A 1eqbB-2vmxA:
62.1
1eqbB-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_B_FFOB2293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
PRO A 350
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.67A 1eqbB-2vmxA:
62.1
1eqbB-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_B_GLYB2292_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 8 SER A  31
HIS A 122
SER A 172
HIS A 200
LYS A 226
ARG A 357
ALO  A 502 (-2.7A)
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
ALO  A 502 ( 3.9A)
PLP  A 501 ( 3.6A)
ALO  A 502 (-3.0A)
0.51A 1eqbA-2vmxA:
61.0
1eqbB-2vmxA:
62.1
1eqbA-2vmxA:
58.85
1eqbB-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_C_FFOC3293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.80A 1eqbC-2vmxA:
62.0
1eqbC-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_C_FFOC3293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
PRO A 350
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.67A 1eqbC-2vmxA:
62.0
1eqbC-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_C_GLYC3292_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 8 SER A  31
HIS A 122
SER A 172
HIS A 200
LYS A 226
ARG A 357
ALO  A 502 (-2.7A)
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
ALO  A 502 ( 3.9A)
PLP  A 501 ( 3.6A)
ALO  A 502 (-3.0A)
0.51A 1eqbC-2vmxA:
62.0
1eqbD-2vmxA:
61.5
1eqbC-2vmxA:
58.85
1eqbD-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_D_FFOD4293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.79A 1eqbD-2vmxA:
61.5
1eqbD-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_D_FFOD4293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
PRO A 350
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.67A 1eqbD-2vmxA:
61.5
1eqbD-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1EQB_D_GLYD4292_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 8 SER A  31
HIS A 122
SER A 172
HIS A 200
LYS A 226
ARG A 357
ALO  A 502 (-2.7A)
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
ALO  A 502 ( 3.9A)
PLP  A 501 ( 3.6A)
ALO  A 502 (-3.0A)
0.50A 1eqbC-2vmxA:
62.0
1eqbD-2vmxA:
61.5
1eqbC-2vmxA:
58.85
1eqbD-2vmxA:
58.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_A_FFOA505_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
7 / 12 GLY A 120
ALA A 173
ASN A 341
SER A 349
PRO A 350
GLY A 351
ARG A 357
None
None
None
None
None
None
ALO  A 502 (-3.0A)
0.46A 2vmyB-2vmxA:
67.7
2vmyB-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_A_FFOA505_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
7 / 12 GLY A 120
HIS A 122
ALA A 173
ASN A 341
SER A 349
GLY A 351
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
None
None
ALO  A 502 (-3.0A)
0.57A 2vmyB-2vmxA:
67.7
2vmyB-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_A_FFOA505_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
ALA A 173
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
None
ALO  A 502 (-3.0A)
0.52A 2vmyB-2vmxA:
67.7
2vmyB-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_A_FFOA505_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 GLY A 120
HIS A 122
VAL A 129
ALA A 173
ASN A 341
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
None
ALO  A 502 (-3.0A)
0.44A 2vmyB-2vmxA:
67.7
2vmyB-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_A_FFOA505_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ARG A 357
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
ALO  A 502 (-3.0A)
0.72A 2vmyB-2vmxA:
67.7
2vmyB-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_A_FFOA505_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
7 / 12 HIS A 122
SER A 172
ALA A 173
ASN A 341
SER A 349
GLY A 351
ARG A 357
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
ALO  A 502 (-3.0A)
0.66A 2vmyB-2vmxA:
67.7
2vmyB-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_A_FFOA505_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 HIS A 122
VAL A 129
SER A 172
ALA A 173
ASN A 341
ARG A 357
PLP  A 501 ( 3.4A)
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.66A 2vmyB-2vmxA:
67.7
2vmyB-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_A_GLYA502_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
5 / 7 SER A  31
HIS A 122
HIS A 200
LYS A 226
ARG A 357
ALO  A 502 (-2.7A)
PLP  A 501 ( 3.4A)
ALO  A 502 ( 3.9A)
PLP  A 501 ( 3.6A)
ALO  A 502 (-3.0A)
0.26A 2vmyA-2vmxA:
67.4
2vmyB-2vmxA:
67.7
2vmyA-2vmxA:
100.00
2vmyB-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_B_FFOB505_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
ALA A 173
ASN A 339
ARG A 357
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
None
None
ALO  A 502 (-3.0A)
0.89A 2vmyA-2vmxA:
67.4
2vmyA-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_B_FFOB505_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
9 / 12 GLY A 120
HIS A 122
SER A 172
ALA A 173
ASN A 339
SER A 349
PRO A 350
GLY A 351
ARG A 357
None
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
None
None
None
None
None
ALO  A 502 (-3.0A)
0.94A 2vmyA-2vmxA:
67.4
2vmyA-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_B_FFOB505_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
8 / 12 GLY A 120
HIS A 122
VAL A 129
SER A 172
ALA A 173
ASN A 339
GLY A 351
ARG A 357
None
PLP  A 501 ( 3.4A)
None
ALO  A 502 (-3.9A)
None
None
None
ALO  A 502 (-3.0A)
0.99A 2vmyA-2vmxA:
67.4
2vmyA-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_B_FFOB505_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 12 LEU A 117
GLY A 120
HIS A 122
LEU A 123
VAL A 129
SER A 172
None
None
PLP  A 501 ( 3.4A)
None
None
ALO  A 502 (-3.9A)
1.22A 2vmyA-2vmxA:
67.4
2vmyA-2vmxA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VMY_B_GLYB502_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
6 / 8 SER A  31
HIS A 122
SER A 172
HIS A 200
LYS A 226
ARG A 357
ALO  A 502 (-2.7A)
PLP  A 501 ( 3.4A)
ALO  A 502 (-3.9A)
ALO  A 502 ( 3.9A)
PLP  A 501 ( 3.6A)
ALO  A 502 (-3.0A)
0.54A 2vmyA-2vmxA:
67.4
2vmyB-2vmxA:
67.7
2vmyA-2vmxA:
100.00
2vmyB-2vmxA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OXC_A_ROCA401_2
(PROTEASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
3 / 3 ARG A 357
LEU A 312
THR A 227
ALO  A 502 (-3.0A)
None
None
0.77A 3oxcA-2vmxA:
undetectable
3oxcA-2vmxA:
14.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SPK_B_TPVB100_1
(HIV-1 PROTEASE)
2vmx SERINE
HYDROXYMETHYLTRANSFE
RASE

(Geobacillus
stearothermophil
us)
5 / 9 ARG A 357
LEU A 312
ASN A 310
VAL A 285
GLY A 203
ALO  A 502 (-3.0A)
None
None
None
None
1.23A 3spkA-2vmxA:
undetectable
3spkA-2vmxA:
15.40