SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'AIR'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JHQ_A_NIOA991_1
(NICOTINATE
MONONUCLEOTIDE:5,6-D
IMETHYLBENZIMIDAZOLE
PHOSPHORIBOSYLTRANSF
ERASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 8 THR A  22
GLY A 122
GLY A  71
SER A 103
GLY A  69
None
None
AIR  A 300 (-3.6A)
None
None
1.34A 1jhqA-1d7aA:
5.2
1jhqA-1d7aA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JHV_A_NIOA991_1
(NICOTINATE
MONONUCLEOTIDE:5,6-D
IMETHYLBENZIMIDAZOLE
PHOSPHORIBOSYLTRANSF
ERASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 8 THR A  22
GLY A 122
GLY A  71
SER A 103
GLY A  69
None
None
AIR  A 300 (-3.6A)
None
None
1.37A 1jhvA-1d7aA:
5.3
1jhvA-1d7aA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JHY_A_NIOA991_1
(NICOTINATE
MONONUCLEOTIDE:5,6-D
IMETHYLBENZIMIDAZOLE
PHOSPHORIBOSYLTRANSF
ERASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 9 THR A  22
GLY A 122
GLY A  71
SER A 103
GLY A  69
None
None
AIR  A 300 (-3.6A)
None
None
1.36A 1jhyA-1d7aA:
5.2
1jhyA-1d7aA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KIA_B_SAMB1293_1
(GLYCINE
N-METHYLTRANSFERASE)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
4 / 5 ARG A 214
ASP A 191
ASN A  80
SER A 194
AIR  A 301 (-3.1A)
ADP  A 302 ( 3.9A)
None
None
1.48A 1kiaB-4fe2A:
undetectable
1kiaB-4fe2A:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KIA_C_SAMC2293_1
(GLYCINE
N-METHYLTRANSFERASE)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
4 / 6 ARG A 214
ASP A 191
ASN A  80
SER A 194
AIR  A 301 (-3.1A)
ADP  A 302 ( 3.9A)
None
None
1.47A 1kiaC-4fe2A:
undetectable
1kiaC-4fe2A:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1N2X_A_SAMA401_0
(S-ADENOSYL-METHYLTRA
NSFERASE MRAW)
4s28 PHOSPHOMETHYLPYRIMID
INE SYNTHASE,
CHLOROPLASTIC

(Arabidopsis
thaliana)
5 / 12 HIS A 348
GLY A 384
GLY A 324
TYR A 449
ASN A 226
None
None
None
AIR  A 702 (-3.2A)
None
1.30A 1n2xA-4s28A:
2.1
1n2xA-4s28A:
19.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBH_B_SAMB1293_1
(GLYCINE
N-METHYLTRANSFERASE)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
4 / 5 ARG A 214
ASP A 191
ASN A  80
SER A 194
AIR  A 301 (-3.1A)
ADP  A 302 ( 3.9A)
None
None
1.48A 1nbhB-4fe2A:
0.0
1nbhB-4fe2A:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A58_A_RBFA300_1
(6,7-DIMETHYL-8-RIBIT
YLLUMAZINE SYNTHASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 11 GLY A  15
SER A  43
ILE A  80
HIS A  38
ALA A  68
AIR  A 300 (-3.5A)
AIR  A 300 (-3.1A)
None
None
None
1.35A 2a58A-1d7aA:
8.1
2a58E-1d7aA:
8.2
2a58A-1d7aA:
23.50
2a58E-1d7aA:
23.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A58_D_RBFD303_1
(6,7-DIMETHYL-8-RIBIT
YLLUMAZINE SYNTHASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 11 ILE A  80
HIS A  38
ALA A  68
GLY A  15
SER A  43
None
None
None
AIR  A 300 (-3.5A)
AIR  A 300 (-3.1A)
1.35A 2a58C-1d7aA:
8.2
2a58D-1d7aA:
8.2
2a58C-1d7aA:
23.50
2a58D-1d7aA:
23.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2B7Z_B_MK1B200_1
(HIV-1 PROTEASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 12 GLY A  71
ALA A  70
ASP A  19
GLY A 122
ILE A 121
AIR  A 300 (-3.6A)
AIR  A 300 (-3.5A)
AIR  A 300 (-2.6A)
None
None
1.06A 2b7zA-1d7aA:
undetectable
2b7zA-1d7aA:
21.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJT_A_SAMA501_1
(N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
3 / 3 ARG A 214
ASP A 128
ASP A 125
AIR  A 301 (-3.1A)
ASP  A 306 ( 4.0A)
None
0.79A 2ejtA-4fe2A:
undetectable
2ejtA-4fe2A:
22.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QMJ_A_ACRA1001_1
(MALTASE-GLUCOAMYLASE
, INTESTINAL)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
5 / 12 ASP A 174
ILE A 173
TRP A 201
ASP A 211
ARG A 215
AIR  A 301 (-2.9A)
None
None
None
None
1.42A 2qmjA-4fe2A:
undetectable
2qmjA-4fe2A:
14.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OGP_A_017A200_1
(FIV PROTEASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 9 GLY A  71
ALA A  70
ASP A  19
GLY A 122
ILE A 121
AIR  A 300 (-3.6A)
AIR  A 300 (-3.5A)
AIR  A 300 (-2.6A)
None
None
0.92A 3ogpA-1d7aA:
undetectable
3ogpA-1d7aA:
22.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OGQ_A_AB1A200_2
(FIV PROTEASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 12 GLY A  71
ALA A  70
ASP A  19
GLY A 122
ILE A 121
AIR  A 300 (-3.6A)
AIR  A 300 (-3.5A)
AIR  A 300 (-2.6A)
None
None
0.97A 3ogqB-1d7aA:
undetectable
3ogqB-1d7aA:
22.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PHA_C_ACRC701_1
(ALPHA-GLUCOSIDASE)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
5 / 12 ASP A 174
ILE A 173
TRP A 201
ASP A 211
ARG A 215
AIR  A 301 (-2.9A)
None
None
None
None
1.46A 3phaC-4fe2A:
undetectable
3phaC-4fe2A:
17.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PHA_D_ACRD701_1
(ALPHA-GLUCOSIDASE)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
5 / 12 ASP A 174
ILE A 173
TRP A 201
ASP A 211
ARG A 215
AIR  A 301 (-2.9A)
None
None
None
None
1.45A 3phaD-4fe2A:
undetectable
3phaD-4fe2A:
17.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SO9_A_017A100_1
(HIV-1 PROTEASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 8 GLY A  71
ALA A  70
ASP A  19
GLY A 122
ILE A 121
AIR  A 300 (-3.6A)
AIR  A 300 (-3.5A)
AIR  A 300 (-2.6A)
None
None
1.15A 3so9A-1d7aA:
undetectable
3so9A-1d7aA:
21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3UCB_A_017A201_1
(PROTEASE)
1d7a PHOSPHORIBOSYLAMINOI
MIDAZOLE CARBOXYLASE

(Escherichia
coli)
5 / 12 GLY A  71
ALA A  70
ASP A  19
GLY A 122
ILE A 121
AIR  A 300 (-3.6A)
AIR  A 300 (-3.5A)
AIR  A 300 (-2.6A)
None
None
1.02A 3ucbA-1d7aA:
undetectable
3ucbA-1d7aA:
21.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FP9_A_SAMA401_1
(METHYLTRANSFERASE
NSUN4)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
3 / 3 ASP A 209
ARG A 199
ASP A 202
None
AIR  A 301 (-3.1A)
None
0.81A 4fp9A-4fe2A:
undetectable
4fp9A-4fe2A:
19.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FP9_C_SAMC401_1
(METHYLTRANSFERASE
NSUN4)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
3 / 3 ASP A 209
ARG A 199
ASP A 202
None
AIR  A 301 (-3.1A)
None
0.86A 4fp9C-4fe2A:
undetectable
4fp9C-4fe2A:
19.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FP9_F_SAMF401_1
(METHYLTRANSFERASE
NSUN4)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
3 / 3 ASP A 209
ARG A 199
ASP A 202
None
AIR  A 301 (-3.1A)
None
0.82A 4fp9F-4fe2A:
undetectable
4fp9F-4fe2A:
19.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K0B_B_SAMB504_0
(S-ADENOSYLMETHIONINE
SYNTHASE)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
4 / 8 ASN A  94
ARG A  93
ASN A 158
ILE A 157
144  A 308 (-4.8A)
AIR  A 301 (-2.9A)
None
None
1.02A 4k0bA-4fe2A:
undetectable
4k0bA-4fe2A:
24.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVW_K_BO2K301_1
(PROTEASOME SUBUNIT
BETA TYPE-5
PROTEASOME SUBUNIT
BETA TYPE-6)
3rgg PHOSPHORIBOSYLAMINOI
MIDAZOLE
CARBOXYLASE, PURE
PROTEIN

(Treponema
denticola)
5 / 11 THR A  42
GLY A  37
GLY A  10
SER A  11
SER A  13
None
None
AIR  A1001 (-3.5A)
AIR  A1001 (-2.7A)
AIR  A1001 ( 3.7A)
1.06A 4qvwK-3rggA:
undetectable
4qvwL-3rggA:
undetectable
4qvwK-3rggA:
23.11
4qvwL-3rggA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVW_Y_BO2Y301_1
(PROTEASOME SUBUNIT
BETA TYPE-5
PROTEASOME SUBUNIT
BETA TYPE-6)
3rgg PHOSPHORIBOSYLAMINOI
MIDAZOLE
CARBOXYLASE, PURE
PROTEIN

(Treponema
denticola)
5 / 11 THR A  42
GLY A  37
GLY A  10
SER A  11
SER A  13
None
None
AIR  A1001 (-3.5A)
AIR  A1001 (-2.7A)
AIR  A1001 ( 3.7A)
1.07A 4qvwY-3rggA:
undetectable
4qvwZ-3rggA:
undetectable
4qvwY-3rggA:
23.11
4qvwZ-3rggA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RTM_A_SAMA301_0
(DNA ADENINE
METHYLASE)
4s28 PHOSPHOMETHYLPYRIMID
INE SYNTHASE,
CHLOROPLASTIC

(Arabidopsis
thaliana)
5 / 12 GLY A 344
GLY A 345
ALA A 349
ILE A 295
TYR A 286
AIR  A 702 (-3.6A)
None
None
None
AIR  A 702 (-4.6A)
0.97A 4rtmA-4s28A:
2.4
4rtmA-4s28A:
17.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XUC_A_SAMA303_0
(CATECHOL
O-METHYLTRANSFERASE)
4s28 PHOSPHOMETHYLPYRIMID
INE SYNTHASE,
CHLOROPLASTIC

(Arabidopsis
thaliana)
5 / 12 ASN A 228
GLY A 502
ILE A 504
ILE A 508
HIS A 464
AIR  A 702 ( 2.8A)
None
None
None
None
1.22A 4xucA-4s28A:
undetectable
4xucA-4s28A:
18.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5A06_B_SORB1341_0
(ALDOSE-ALDOSE
OXIDOREDUCTASE)
4fe2 PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Streptococcus
pneumoniae)
4 / 7 ARG A 215
ARG A  93
ASP A 174
ILE A 173
None
AIR  A 301 (-2.9A)
AIR  A 301 (-2.9A)
None
1.07A 5a06B-4fe2A:
undetectable
5a06B-4fe2A:
20.74