SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'AB0'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1H8S_A_AICA1000_1
(MUTANT AL2 6E7P9G)
2e27 ANTI-CIGUATOXIN
ANTIBODY, HEAVY
CHAIN
ANTI-CIGUATOXIN
ANTIBODY, LIGHT
CHAIN

(Mus
musculus)
6 / 12 TYR L  36
PHE L  98
TRP H  33
VAL H  37
ALA H  93
TRP H 103
None
None
AB0  H6001 (-3.7A)
None
None
None
0.80A 1h8sA-2e27L:
20.6
1h8sA-2e27L:
26.59
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1I7Z_A_COCA301_1
(CHIMERA OF IG KAPPA
CHAIN: HUMAN
CONSTANT REGION AND
MOUSE VARIABLE
REGION)
2e27 ANTI-CIGUATOXIN
ANTIBODY, LIGHT
CHAIN

(Mus
musculus)
4 / 8 TYR L  36
TYR L  49
LEU L  89
TRP L  96
None
AB0  H6001 (-4.6A)
None
AB0  H6001 (-4.2A)
0.67A 1i7zA-2e27L:
21.0
1i7zA-2e27L:
31.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JGL_L_ESTL911_1
(IG GAMMA-1-CHAIN
IG KAPPA-CHAIN)
2e27 ANTI-CIGUATOXIN
ANTIBODY, HEAVY
CHAIN
ANTI-CIGUATOXIN
ANTIBODY, LIGHT
CHAIN

(Mus
musculus)
5 / 10 GLY H1002
ALA L  34
TYR L  36
LEU L  46
TYR L  49
None
AB0  H6001 ( 4.0A)
None
AB0  H6001 ( 4.9A)
AB0  H6001 (-4.6A)
0.57A 1jglH-2e27H:
19.9
1jglL-2e27H:
16.2
1jglH-2e27H:
27.98
1jglL-2e27H:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OTH_A_IMNA301_1
(PHOSPHOLIPASE A2
VRV-PL-VIIIA)
2e27 ANTI-CIGUATOXIN
ANTIBODY, HEAVY
CHAIN
ANTI-CIGUATOXIN
ANTIBODY, LIGHT
CHAIN

(Mus
musculus)
3 / 3 ASP H 100
TYR L  49
LYS L  55
None
AB0  H6001 (-4.6A)
None
1.22A 2othA-2e27H:
undetectable
2othA-2e27H:
20.00