SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '9WY'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1FXV_B_PNNB1001_0 (PENICILLIN ACYLASE)	5w4z	RIBOFLAVIN LYASE (Herbiconiux)	4 / 7	PHE A 248 SER A 232 SER A 22 PHE A 14	9WY A 501 (-3.4A) 9WY A 501 (-3.6A) RBF A 502 (-3.8A) RBF A 502 (-3.6A)	1.14A	1fxvA-5w4zA: undetectable 1fxvB-5w4zA: undetectable	1fxvA-5w4zA: undetectable 1fxvB-5w4zA: undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2DPZ_A_TYLA2001_1 (PHOSPHOLIPASE A2 VRV-PL-VIIIA)	5w4z	RIBOFLAVIN LYASE (Herbiconiux)	4 / 6	ALA A 345 HIS A 158 ASP A 159 TYR A 162	None 9WY A 501 (-3.8A) None None	0.84A	2dpzA-5w4zA: undetectable	2dpzA-5w4zA: 22.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2QHF_A_ACTA503_0 (CHORISMATE SYNTHASE)	5w4z	RIBOFLAVIN LYASE (Herbiconiux)	4 / 5	GLN A 343 THR A 342 ARG A 346 ALA A 345	RBF A 502 (-4.1A) 9WY A 501 (-3.7A) None None	1.28A	2qhfA-5w4zA: undetectable	2qhfA-5w4zA: undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3KKZ_B_SAMB302_0 (UNCHARACTERIZED PROTEIN Q5LES9)	5w4z	RIBOFLAVIN LYASE (Herbiconiux)	5 / 12	GLY A 244 GLY A 231 GLY A 236 SER A 340 ALA A 230	None 9WY A 501 (-3.3A) 9WY A 501 ( 4.5A) RBF A 502 (-3.1A) 9WY A 501 (-3.4A)	1.06A	3kkzB-5w4zA: undetectable	3kkzB-5w4zA: undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3SPK_A_TPVA100_1 (HIV-1 PROTEASE)	5w4z	RIBOFLAVIN LYASE (Herbiconiux)	5 / 11	ALA A 165 ASP A 166 ASP A 163 GLY A 236 THR A 141	None None None 9WY A 501 ( 4.5A) 9WY A 501 (-4.5A)	1.14A	3spkA-5w4zA: undetectable	3spkA-5w4zA: 14.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5V1T_A_SAMA605_0 (RADICAL SAM)	5w4z	RIBOFLAVIN LYASE (Herbiconiux)	5 / 12	LEU A 393 VAL A 106 ASN A 137 SER A 232 THR A 342	None None None 9WY A 501 (-3.6A) 9WY A 501 (-3.7A)	1.39A	5v1tA-5w4zA: 5.3	5v1tA-5w4zA: undetectable

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1FXV_B_PNNB1001_0","PENICILLIN ACYLASE","5w4z","RIBOFLAVIN LYASE","Herbiconiux",4,"PHE A 248;SER A 232;SER A  22;PHE A  14","9WY A 501 (-3.4A);9WY A 501 (-3.6A);RBF A 502 (-3.8A);RBF A 502 (-3.6A)","1.14A","1fxvA-5w4zA:undetectable;1fxvB-5w4zA:undetectable",null],["2DPZ_A_TYLA2001_1","PHOSPHOLIPASE A2 VRV-PL-VIIIA","5w4z","RIBOFLAVIN LYASE","Herbiconiux",4,"ALA A 345;HIS A 158;ASP A 159;TYR A 162","None;9WY A 501 (-3.8A);None;None","0.84A","2dpzA-5w4zA:undetectable","1fxvA-5w4zA:undetectable;1fxvB-5w4zA:undetectable"],["2QHF_A_ACTA503_0","CHORISMATE SYNTHASE","5w4z","RIBOFLAVIN LYASE","Herbiconiux",4,"GLN A 343;THR A 342;ARG A 346;ALA A 345","RBF A 502 (-4.1A);9WY A 501 (-3.7A);None;None","1.28A","2qhfA-5w4zA:undetectable","2dpzA-5w4zA:22.58"],["3KKZ_B_SAMB302_0","UNCHARACTERIZED PROTEIN Q5LES9","5w4z","RIBOFLAVIN LYASE","Herbiconiux",5,"GLY A 244;GLY A 231;GLY A 236;SER A 340;ALA A 230","None;9WY A 501 (-3.3A);9WY A 501 ( 4.5A);RBF A 502 (-3.1A);9WY A 501 (-3.4A)","1.06A","3kkzB-5w4zA:undetectable","2qhfA-5w4zA:undetectable"],["3SPK_A_TPVA100_1","HIV-1 PROTEASE","5w4z","RIBOFLAVIN LYASE","Herbiconiux",5,"ALA A 165;ASP A 166;ASP A 163;GLY A 236;THR A 141","None;None;None;9WY A 501 ( 4.5A);9WY A 501 (-4.5A)","1.14A","3spkA-5w4zA:undetectable","3kkzB-5w4zA:undetectable"],["5V1T_A_SAMA605_0","RADICAL SAM","5w4z","RIBOFLAVIN LYASE","Herbiconiux",5,"LEU A 393;VAL A 106;ASN A 137;SER A 232;THR A 342","None;None;None;9WY A 501 (-3.6A);9WY A 501 (-3.7A)","1.39A","5v1tA-5w4zA:5.3","3spkA-5w4zA:14.56"]]