SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '9UB'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

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	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1VE3_B_SAMB301_1 (HYPOTHETICAL PROTEIN PH0226)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	4 / 4	TYR A 468 ARG A 471 ASP A 489 ASP A 525	9UB A 803 (-4.7A) None None None	1.48A	1ve3B-5oglA: 3.5	1ve3B-5oglA: 14.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3WEL_A_ACRA1001_1 (ALPHA-GLUCOSIDASE)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	5 / 12	ASP A 481 ALA A 59 PHE A 60 ARG A 471 HIS A 72	None 9UB A 803 ( 3.8A) 9UB A 803 ( 4.4A) None None	0.95A	3welA-5oglA: undetectable	3welA-5oglA: 21.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3WEO_A_ACRA1001_1 (ALPHA-GLUCOSIDASE)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	5 / 12	ASP A 481 ALA A 59 PHE A 60 ARG A 471 HIS A 72	None 9UB A 803 ( 3.8A) 9UB A 803 ( 4.4A) None None	0.95A	3weoA-5oglA: undetectable	3weoA-5oglA: 21.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4LTW_A_486A303_1 (ANCESTRAL STEROID RECEPTOR 2)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	5 / 9	ALA A 205 LEU A 365 GLN A 289 TYR A 200 LEU A 235	9UB A 803 ( 3.9A) 9UB A 803 ( 4.1A) 9UB A 803 (-2.8A) None None	1.40A	4ltwA-5oglA: undetectable	4ltwA-5oglA: 19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4MX0_A_BCZA513_1 (NEURAMINIDASE)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	3 / 3	ARG A 147 ASP A 154 ARG A 375	MN A 801 ( 4.9A) MN A 801 (-2.8A) 9UB A 803 (-3.1A)	0.90A	4mx0A-5oglA: undetectable	4mx0A-5oglA: 20.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4QYN_A_RTLA201_0 (RETINOL-BINDING PROTEIN 2)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	5 / 12	ILE A 114 ALA A 385 THR A 377 TYR A 379 LEU A 160	None None None 9UB A 803 (-4.4A) None	1.27A	4qynA-5oglA: undetectable	4qynA-5oglA: 11.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5W7P_A_SAMA501_1 (OXAC)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	4 / 5	TYR A 79 HIS A 485 ASP A 481 ASP A 76	9UB A 803 (-4.4A) None None MN A 802 (-3.3A)	1.15A	5w7pA-5oglA: undetectable	5w7pA-5oglA: 19.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6MN1_A_LLLA302_0 (AMINOGLYCOSIDE N(3)-ACETYLTRANSFERA SE)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	5 / 10	TYR A 468 ASP A 481 GLY A 483 TYR A 79 ASP A 475	9UB A 803 (-4.7A) None 9UB A 803 ( 3.8A) 9UB A 803 (-4.4A) MN A 802 (-2.9A)	1.44A	6mn1A-5oglA: undetectable	6mn1A-5oglA: 7.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6MN1_B_LLLB302_0 (AMINOGLYCOSIDE N(3)-ACETYLTRANSFERA SE)	5ogl	UNDECAPRENYL-DIPHOSP HOOLIGOSACCHARIDE--P ROTEIN GLYCOTRANSFERASE (Campylobacter lari)	5 / 10	TYR A 468 ASP A 481 GLY A 483 TYR A 79 ASP A 475	9UB A 803 (-4.7A) None 9UB A 803 ( 3.8A) 9UB A 803 (-4.4A) MN A 802 (-2.9A)	1.44A	6mn1B-5oglA: undetectable	6mn1B-5oglA: 7.87

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1VE3_B_SAMB301_1","HYPOTHETICAL PROTEIN PH0226","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",4,"TYR A 468;ARG A 471;ASP A 489;ASP A 525","9UB A 803 (-4.7A);None;None;None","1.48A","1ve3B-5oglA:3.5",null],["3WEL_A_ACRA1001_1","ALPHA-GLUCOSIDASE","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",5,"ASP A 481;ALA A  59;PHE A  60;ARG A 471;HIS A  72","None;9UB A 803 ( 3.8A);9UB A 803 ( 4.4A);None;None","0.95A","3welA-5oglA:undetectable","1ve3B-5oglA:14.31"],["3WEO_A_ACRA1001_1","ALPHA-GLUCOSIDASE","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",5,"ASP A 481;ALA A  59;PHE A  60;ARG A 471;HIS A  72","None;9UB A 803 ( 3.8A);9UB A 803 ( 4.4A);None;None","0.95A","3weoA-5oglA:undetectable","3welA-5oglA:21.97"],["4LTW_A_486A303_1","ANCESTRAL STEROID RECEPTOR 2","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",5,"ALA A 205;LEU A 365;GLN A 289;TYR A 200;LEU A 235","9UB A 803 ( 3.9A);9UB A 803 ( 4.1A);9UB A 803 (-2.8A);None;None","1.40A","4ltwA-5oglA:undetectable","3weoA-5oglA:21.97"],["4MX0_A_BCZA513_1","NEURAMINIDASE","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",3,"ARG A 147;ASP A 154;ARG A 375"," MN A 801 ( 4.9A); MN A 801 (-2.8A);9UB A 803 (-3.1A)","0.90A","4mx0A-5oglA:undetectable","4ltwA-5oglA:19.23"],["4QYN_A_RTLA201_0","RETINOL-BINDING PROTEIN 2","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",5,"ILE A 114;ALA A 385;THR A 377;TYR A 379;LEU A 160","None;None;None;9UB A 803 (-4.4A);None","1.27A","4qynA-5oglA:undetectable","4mx0A-5oglA:20.33"],["5W7P_A_SAMA501_1","OXAC","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",4,"TYR A  79;HIS A 485;ASP A 481;ASP A  76","9UB A 803 (-4.4A);None;None; MN A 802 (-3.3A)","1.15A","5w7pA-5oglA:undetectable","4qynA-5oglA:11.50"],["6MN1_A_LLLA302_0","AMINOGLYCOSIDE N(3)-ACETYLTRANSFERASE","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",5,"TYR A 468;ASP A 481;GLY A 483;TYR A  79;ASP A 475","9UB A 803 (-4.7A);None;9UB A 803 ( 3.8A);9UB A 803 (-4.4A); MN A 802 (-2.9A)","1.44A","6mn1A-5oglA:undetectable","5w7pA-5oglA:19.59"],["6MN1_B_LLLB302_0","AMINOGLYCOSIDE N(3)-ACETYLTRANSFERASE","5ogl","UNDECAPRENYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOTRANSFERASE","Campylobacter lari",5,"TYR A 468;ASP A 481;GLY A 483;TYR A  79;ASP A 475","9UB A 803 (-4.7A);None;9UB A 803 ( 3.8A);9UB A 803 (-4.4A); MN A 802 (-2.9A)","1.44A","6mn1B-5oglA:undetectable","6mn1A-5oglA:7.87"]]