SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '9S8'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HWI_B_115B1_1
(HMG-COA REDUCTASE)
5odr HETERODISULFIDE
REDUCTASE, SUBUNIT B

(Methanothermococ
cus
thermolithotroph
icus)
5 / 9 CYH B  42
LEU B  64
ALA B  88
LEU B  92
LEU B  57
9S8  B 301 (-2.0A)
None
None
None
None
1.48A 1hwiA-5odrB:
undetectable
1hwiA-5odrB:
22.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RLB_B_VIBB187_1
(THIT)
5odr HETERODISULFIDE
REDUCTASE, SUBUNIT B

(Methanothermococ
cus
thermolithotroph
icus)
5 / 12 GLU B 124
TYR B  82
GLY B 152
VAL B 230
ASN B  79
None
None
9S8  B 302 ( 3.8A)
None
9S8  B 302 (-4.4A)
1.46A 3rlbB-5odrB:
undetectable
3rlbB-5odrB:
20.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A6D_A_SAMA1350_0
(HYDROXYINDOLE
O-METHYLTRANSFERASE)
5odr HETERODISULFIDE
REDUCTASE, SUBUNIT B
HETERODISULFIDE
REDUCTASE, SUBUNIT C

(Methanothermococ
cus
thermolithotroph
icus;
Methanothermococ
cus
thermolithotroph
icus)
5 / 12 TYR C  52
LEU B 207
GLY B 198
ILE C  97
ALA B 196
SF4  C 202 (-4.9A)
None
COM  B 303 (-4.0A)
None
9S8  B 302 ( 4.2A)
1.15A 4a6dA-5odrC:
undetectable
4a6dA-5odrC:
20.40