SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '96V'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U5J_A_08HA1_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
5v84 CAT EYE SYNDROME
CRITICAL REGION
PROTEIN 2

(Homo
sapiens)
4 / 7 TRP A 457
PRO A 458
ASN A 514
MET A 523
None
96V  A 602 (-4.5A)
96V  A 602 (-2.6A)
None
0.41A 3u5jA-5v84A:
16.2
3u5jA-5v84A:
28.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U5K_A_08JA1_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
5v84 CAT EYE SYNDROME
CRITICAL REGION
PROTEIN 2

(Homo
sapiens)
5 / 8 TRP A 457
PRO A 458
VAL A 463
ASN A 514
MET A 523
None
96V  A 602 (-4.5A)
96V  A 602 (-3.9A)
96V  A 602 (-2.6A)
None
0.28A 3u5kA-5v84A:
16.6
3u5kA-5v84A:
28.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U5K_B_08JB2_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
5v84 CAT EYE SYNDROME
CRITICAL REGION
PROTEIN 2

(Homo
sapiens)
4 / 7 TRP A 457
PRO A 458
VAL A 463
ASN A 514
None
96V  A 602 (-4.5A)
96V  A 602 (-3.9A)
96V  A 602 (-2.6A)
0.27A 3u5kB-5v84A:
16.5
3u5kB-5v84A:
28.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U5K_C_08JC3_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
5v84 CAT EYE SYNDROME
CRITICAL REGION
PROTEIN 2

(Homo
sapiens)
5 / 8 TRP A 457
PRO A 458
VAL A 463
ASN A 514
MET A 523
None
96V  A 602 (-4.5A)
96V  A 602 (-3.9A)
96V  A 602 (-2.6A)
None
0.35A 3u5kC-5v84A:
16.6
3u5kC-5v84A:
28.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U5K_D_08JD4_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
5v84 CAT EYE SYNDROME
CRITICAL REGION
PROTEIN 2

(Homo
sapiens)
5 / 8 TRP A 457
PRO A 458
VAL A 463
ASN A 514
MET A 523
None
96V  A 602 (-4.5A)
96V  A 602 (-3.9A)
96V  A 602 (-2.6A)
None
0.33A 3u5kD-5v84A:
16.7
3u5kD-5v84A:
28.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C66_A_H4CA1168_0
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
5v84 CAT EYE SYNDROME
CRITICAL REGION
PROTEIN 2

(Homo
sapiens)
5 / 9 TRP A 457
PRO A 458
VAL A 463
ASN A 514
MET A 523
None
96V  A 602 (-4.5A)
96V  A 602 (-3.9A)
96V  A 602 (-2.6A)
None
0.29A 4c66A-5v84A:
16.3
4c66A-5v84A:
28.87
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5PBE_A_TYLA2001_1
(BROMODOMAIN ADJACENT
TO ZINC FINGER
DOMAIN PROTEIN 2B)
5v84 CAT EYE SYNDROME
CRITICAL REGION
PROTEIN 2

(Homo
sapiens)
4 / 6 PRO A 458
VAL A 463
TYR A 471
ASN A 514
96V  A 602 (-4.5A)
96V  A 602 (-3.9A)
None
96V  A 602 (-2.6A)
0.54A 5pbeA-5v84A:
16.7
5pbeA-5v84A:
34.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y1Y_A_HNQA201_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
5v84 CAT EYE SYNDROME
CRITICAL REGION
PROTEIN 2

(Homo
sapiens)
5 / 8 PRO A 458
VAL A 463
CYH A 510
TYR A 513
ASN A 514
96V  A 602 (-4.5A)
96V  A 602 (-3.9A)
96V  A 602 ( 3.9A)
96V  A 602 ( 4.3A)
96V  A 602 (-2.6A)
0.43A 5y1yA-5v84A:
16.5
5y1yA-5v84A:
28.87