SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '7OD'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E3V_A_DXCA801_0
(STEROID
DELTA-ISOMERASE)
5tz6 CURJ
(Moorea
producens)
5 / 12 PHE A1232
GLY A1234
PHE A 978
ASP A1156
ALA A 989
None
None
7OD  A1301 (-4.5A)
7OD  A1301 (-2.1A)
None
1.32A 1e3vA-5tz6A:
1.1
1e3vA-5tz6A:
17.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E3V_B_DXCB801_0
(STEROID
DELTA-ISOMERASE)
5tz6 CURJ
(Moorea
producens)
5 / 11 PHE A1232
GLY A1234
PHE A 978
ASP A1156
ALA A 989
None
None
7OD  A1301 (-4.5A)
7OD  A1301 (-2.1A)
None
1.30A 1e3vB-5tz6A:
undetectable
1e3vB-5tz6A:
17.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EM0_B_CHDB152_0
(ILEAL BILE
ACID-BINDING PROTEIN)
5tz6 CURJ
(Moorea
producens)
4 / 8 ILE A1163
PRO A1239
ASN A1238
GLY A1234
7OD  A1301 ( 4.9A)
7OD  A1301 ( 4.7A)
None
None
0.82A 3em0B-5tz6A:
2.4
3em0B-5tz6A:
18.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4URO_A_NOVA2000_1
(DNA GYRASE SUBUNIT B)
5tz6 CURJ
(Moorea
producens)
5 / 12 ASP A1100
ARG A1120
ILE A1104
ASP A1156
ILE A1163
None
None
None
7OD  A1301 (-2.1A)
7OD  A1301 ( 4.9A)
1.30A 4uroA-5tz6A:
undetectable
4uroA-5tz6A:
19.70