SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '6KB'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1S2A_A_IMNA2001_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TRP A  89
HIS A 120
GLU A 189
TYR A 213
SER A 214
None
6KB  A 401 ( 4.0A)
None
6KB  A 401 (-3.4A)
6KB  A 401 (-2.7A)
0.27A 1s2aA-5jgyA:
39.9
1s2aA-5jgyA:
39.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HDN_J_TACJ5888_1
(ELONGATION FACTOR
EF-TU)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
4 / 6 THR A  85
ASP A  54
SER A 254
VAL A 210
None
6KB  A 401 (-3.7A)
None
None
1.30A 2hdnI-5jgyA:
undetectable
2hdnJ-5jgyA:
2.2
2hdnL-5jgyA:
2.4
2hdnI-5jgyA:
9.96
2hdnJ-5jgyA:
21.57
2hdnL-5jgyA:
21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HDN_L_TACL6888_1
(ELONGATION FACTOR
EF-TU)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
4 / 6 SER A 254
VAL A 210
THR A  85
ASP A  54
None
None
None
6KB  A 401 (-3.7A)
1.25A 2hdnJ-5jgyA:
2.2
2hdnK-5jgyA:
undetectable
2hdnL-5jgyA:
2.4
2hdnJ-5jgyA:
21.57
2hdnK-5jgyA:
9.96
2hdnL-5jgyA:
21.57
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2INE_A_PACA317_0
(ALDOSE REDUCTASE)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
4 / 5 TRP A  31
TYR A  59
HIS A 120
TRP A 121
EDO  A 402 ( 3.2A)
6KB  A 401 ( 4.6A)
6KB  A 401 ( 4.0A)
6KB  A 401 ( 4.4A)
0.34A 2ineA-5jgyA:
41.8
2ineA-5jgyA:
39.71
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2ISF_A_PACA317_0
(ALDOSE REDUCTASE)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
4 / 5 TRP A  31
TYR A  59
HIS A 120
TRP A 121
EDO  A 402 ( 3.2A)
6KB  A 401 ( 4.6A)
6KB  A 401 ( 4.0A)
6KB  A 401 ( 4.4A)
0.33A 2isfA-5jgyA:
41.6
2isfA-5jgyA:
39.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FPJ_B_SAMB301_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TYR A  59
ILE A 119
VAL A 164
ILE A 162
VAL A 146
6KB  A 401 ( 4.6A)
None
None
None
None
1.24A 3fpjB-5jgyA:
undetectable
3fpjB-5jgyA:
22.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3R43_A_ID8A332_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TYR A  59
TRP A  89
HIS A 120
ASN A 166
TYR A 213
6KB  A 401 ( 4.6A)
None
6KB  A 401 ( 4.0A)
6KB  A 401 (-3.5A)
6KB  A 401 (-3.4A)
0.26A 3r43A-5jgyA:
40.0
3r43A-5jgyA:
38.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3R6I_A_JMSA332_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TYR A  59
TRP A  89
HIS A 120
ASN A 166
TYR A 213
6KB  A 401 ( 4.6A)
None
6KB  A 401 ( 4.0A)
6KB  A 401 (-3.5A)
6KB  A 401 (-3.4A)
0.26A 3r6iA-5jgyA:
39.9
3r6iA-5jgyA:
38.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3RX3_A_SUZA317_1
(ALDOSE REDUCTASE)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 10 TRP A  31
TYR A  59
HIS A 120
TRP A 121
LEU A 299
EDO  A 402 ( 3.2A)
6KB  A 401 ( 4.6A)
6KB  A 401 ( 4.0A)
6KB  A 401 ( 4.4A)
EDO  A 404 (-4.3A)
1.00A 3rx3A-5jgyA:
41.7
3rx3A-5jgyA:
39.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3S3G_A_TLTA317_1
(ALDOSE REDUCTASE)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
4 / 7 TRP A  31
TYR A  59
HIS A 120
TRP A 121
EDO  A 402 ( 3.2A)
6KB  A 401 ( 4.6A)
6KB  A 401 ( 4.0A)
6KB  A 401 ( 4.4A)
0.43A 3s3gA-5jgyA:
41.8
3s3gA-5jgyA:
39.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3UG8_A_IMNA2001_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TRP A  89
ASN A 166
TYR A 213
SER A 214
SER A 218
None
6KB  A 401 (-3.5A)
6KB  A 401 (-3.4A)
6KB  A 401 (-2.7A)
6KB  A 401 (-2.7A)
0.74A 3ug8A-5jgyA:
39.9
3ug8A-5jgyA:
38.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3UG8_A_IMNA2001_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
6 / 12 TYR A  59
TRP A  89
HIS A 120
ASN A 166
TYR A 213
SER A 214
6KB  A 401 ( 4.6A)
None
6KB  A 401 ( 4.0A)
6KB  A 401 (-3.5A)
6KB  A 401 (-3.4A)
6KB  A 401 (-2.7A)
0.36A 3ug8A-5jgyA:
39.9
3ug8A-5jgyA:
38.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3UGR_A_IMNA2001_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TRP A  89
HIS A 120
TYR A 213
SER A 214
PHE A 300
None
6KB  A 401 ( 4.0A)
6KB  A 401 (-3.4A)
6KB  A 401 (-2.7A)
None
1.05A 3ugrA-5jgyA:
39.7
3ugrA-5jgyA:
38.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3UGR_A_IMNA2001_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TRP A  89
HIS A 120
TYR A 213
SER A 214
SER A 218
None
6KB  A 401 ( 4.0A)
6KB  A 401 (-3.4A)
6KB  A 401 (-2.7A)
6KB  A 401 (-2.7A)
0.75A 3ugrA-5jgyA:
39.7
3ugrA-5jgyA:
38.81
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3UZZ_B_ASDB501_1
(3-OXO-5-BETA-STEROID
4-DEHYDROGENASE)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
4 / 8 TYR A  59
HIS A 120
LEU A 299
MET A 131
6KB  A 401 ( 4.6A)
6KB  A 401 ( 4.0A)
EDO  A 404 (-4.3A)
None
1.05A 3uzzB-5jgyA:
40.5
3uzzB-5jgyA:
37.37
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3V35_A_NTIA317_1
(ALDOSE REDUCTASE)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
4 / 8 TRP A  31
TRP A  89
HIS A 120
TRP A 121
EDO  A 402 ( 3.2A)
None
6KB  A 401 ( 4.0A)
6KB  A 401 ( 4.4A)
0.33A 3v35A-5jgyA:
42.0
3v35A-5jgyA:
39.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4JTR_A_IBPA401_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C2)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
4 / 8 TYR A  59
TRP A  89
HIS A 120
LEU A 294
6KB  A 401 ( 4.6A)
None
6KB  A 401 ( 4.0A)
6KB  A 401 ( 4.8A)
0.57A 4jtrA-5jgyA:
40.1
4jtrA-5jgyA:
38.44
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4YVV_A_GBMA402_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 9 TYR A  59
TRP A  89
HIS A 120
ASN A 166
TYR A 213
6KB  A 401 ( 4.6A)
None
6KB  A 401 ( 4.0A)
6KB  A 401 (-3.5A)
6KB  A 401 (-3.4A)
0.22A 4yvvA-5jgyA:
39.8
4yvvA-5jgyA:
37.65
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4YVX_A_GMRA401_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TYR A  59
TRP A  89
HIS A 120
LEU A 125
ASN A 166
6KB  A 401 ( 4.6A)
None
6KB  A 401 ( 4.0A)
None
6KB  A 401 (-3.5A)
0.27A 4yvxA-5jgyA:
39.6
4yvxA-5jgyA:
37.65
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4YVX_B_GMRB401_1
(ALDO-KETO REDUCTASE
FAMILY 1 MEMBER C3)
5jgy ALDOSE REDUCTASE,
AKR4C13

(Zea
mays)
5 / 12 TYR A  59
TRP A  89
HIS A 120
LEU A 125
ASN A 166
6KB  A 401 ( 4.6A)
None
6KB  A 401 ( 4.0A)
None
6KB  A 401 (-3.5A)
0.24A 4yvxB-5jgyA:
39.5
4yvxB-5jgyA:
37.65