SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5YA'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AVP_A_MV2A313_1
(PANTOTHENATE KINASE)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
4 / 7 ASP B  81
HIS B 135
LEU B 223
ILE B 190
5YA  B 302 ( 2.5A)
ZN  B 303 ( 3.7A)
None
None
0.94A 3avpA-5o6yB:
undetectable
3avpA-5o6yB:
11.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DZG_B_NCAB302_0
(ADP-RIBOSYL CYCLASE
1)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
4 / 7 LEU B 232
ASP B  81
SER B 235
THR B 197
None
5YA  B 302 ( 2.5A)
None
None
1.15A 3dzgB-5o6yB:
undetectable
3dzgB-5o6yB:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NCD_A_ACTA301_0
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
5 / 6 ASP B  80
ASP B  81
HIS B 131
HIS B 135
HIS B 225
5YA  B 302 (-3.7A)
5YA  B 302 ( 2.5A)
ZN  B 303 ( 3.4A)
ZN  B 303 ( 3.7A)
5YA  B 302 (-4.3A)
0.51A 5ncdA-5o6yB:
24.6
5ncdD-5o6yB:
24.8
5ncdA-5o6yB:
undetectable
5ncdD-5o6yB:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NCD_C_ACTC301_0
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
5 / 6 ASP B  80
ASP B  81
HIS B 131
HIS B 135
HIS B 225
5YA  B 302 (-3.7A)
5YA  B 302 ( 2.5A)
ZN  B 303 ( 3.4A)
ZN  B 303 ( 3.7A)
5YA  B 302 (-4.3A)
0.43A 5ncdB-5o6yB:
24.8
5ncdC-5o6yB:
24.7
5ncdB-5o6yB:
undetectable
5ncdC-5o6yB:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NCD_D_ACTD301_0
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
4 / 4 ASP B  80
HIS B 131
HIS B 135
HIS B 225
5YA  B 302 (-3.7A)
ZN  B 303 ( 3.4A)
ZN  B 303 ( 3.7A)
5YA  B 302 (-4.3A)
0.44A 5ncdD-5o6yB:
24.8
5ncdD-5o6yB:
undetectable
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5NEK_B_AZMB302_1
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
6 / 8 ASP B  80
ASP B  81
HIS B 131
HIS B 135
TRP B 200
HIS B 225
5YA  B 302 (-3.7A)
5YA  B 302 ( 2.5A)
ZN  B 303 ( 3.4A)
ZN  B 303 ( 3.7A)
5YA  B 302 ( 4.6A)
5YA  B 302 (-4.3A)
0.58A 5nekB-5o6yB:
24.7
5nekB-5o6yB:
36.08
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5NEK_D_AZMD302_1
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
7 / 8 ASP B  80
ASP B  81
HIS B 131
HIS B 135
TRP B 193
TRP B 200
HIS B 225
5YA  B 302 (-3.7A)
5YA  B 302 ( 2.5A)
ZN  B 303 ( 3.4A)
ZN  B 303 ( 3.7A)
None
5YA  B 302 ( 4.6A)
5YA  B 302 (-4.3A)
0.65A 5nekD-5o6yB:
24.5
5nekD-5o6yB:
36.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NEL_A_ACTA302_0
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
5 / 6 ASP B  80
ASP B  81
HIS B 131
HIS B 135
HIS B 225
5YA  B 302 (-3.7A)
5YA  B 302 ( 2.5A)
ZN  B 303 ( 3.4A)
ZN  B 303 ( 3.7A)
5YA  B 302 (-4.3A)
0.53A 5nelA-5o6yB:
24.6
5nelD-5o6yB:
24.5
5nelA-5o6yB:
undetectable
5nelD-5o6yB:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NEL_C_ACTC302_0
(PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE)
5o6y PEPTIDOGLYCAN
N-ACETYLGLUCOSAMINE
DEACETYLASE

(Bacillus
cereus)
5 / 6 ASP B  80
HIS B 131
HIS B 135
LEU B 223
HIS B 225
5YA  B 302 (-3.7A)
ZN  B 303 ( 3.4A)
ZN  B 303 ( 3.7A)
None
5YA  B 302 (-4.3A)
0.46A 5nelB-5o6yB:
24.6
5nelC-5o6yB:
24.6
5nelB-5o6yB:
undetectable
5nelC-5o6yB:
undetectable