SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '5WP'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBH_A_SAMA293_1
(GLYCINE
N-METHYLTRANSFERASE)
5fbu PHOSPHOENOLPYRUVATE
SYNTHASE

(Listeria
monocytogenes)
3 / 3 ARG A 666
ASP A 391
ASN A 752
5WP  A 901 (-2.8A)
None
None
0.90A 1nbhA-5fbuA:
undetectable
1nbhA-5fbuA:
16.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBH_D_SAMD3293_1
(GLYCINE
N-METHYLTRANSFERASE)
5fbu PHOSPHOENOLPYRUVATE
SYNTHASE

(Listeria
monocytogenes)
3 / 3 ARG A 666
ASP A 391
ASN A 752
5WP  A 901 (-2.8A)
None
None
0.88A 1nbhD-5fbuA:
undetectable
1nbhD-5fbuA:
16.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2UVN_A_ECNA1409_1
(CYTOCHROME P450 130)
5fbu PHOSPHOENOLPYRUVATE
SYNTHASE

(Listeria
monocytogenes)
5 / 12 LEU A 387
PRO A 392
GLY A 821
GLY A 820
THR A 824
5WP  A 901 (-4.3A)
None
None
None
None
1.13A 2uvnA-5fbuA:
undetectable
2uvnA-5fbuA:
20.12
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5HV1_A_RFPA902_1
(PHOSPHOENOLPYRUVATE
SYNTHASE)
5fbu PHOSPHOENOLPYRUVATE
SYNTHASE

(Listeria
monocytogenes)
11 / 12 VAL A 333
TYR A 351
PRO A 356
ALA A 357
VAL A 368
LEU A 387
SER A 390
LEU A 478
ILE A 487
MET A 488
MET A 491
5WP  A 901 (-3.6A)
5WP  A 901 (-4.5A)
5WP  A 901 (-4.3A)
5WP  A 901 ( 4.0A)
5WP  A 901 (-4.5A)
5WP  A 901 (-4.3A)
5WP  A 901 ( 3.7A)
5WP  A 901 (-4.7A)
None
5WP  A 901 (-4.2A)
5WP  A 901 (-3.6A)
0.51A 5hv1A-5fbuA:
51.3
5hv1A-5fbuA:
98.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5HV1_A_RFPA902_1
(PHOSPHOENOLPYRUVATE
SYNTHASE)
5fbu PHOSPHOENOLPYRUVATE
SYNTHASE

(Listeria
monocytogenes)
6 / 12 VAL A 333
TYR A 351
VAL A 368
LEU A 387
ILE A 484
MET A 488
5WP  A 901 (-3.6A)
5WP  A 901 (-4.5A)
5WP  A 901 (-4.5A)
5WP  A 901 (-4.3A)
None
5WP  A 901 (-4.2A)
1.06A 5hv1A-5fbuA:
51.3
5hv1A-5fbuA:
98.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5HV1_A_RFPA902_1
(PHOSPHOENOLPYRUVATE
SYNTHASE)
5fbu PHOSPHOENOLPYRUVATE
SYNTHASE

(Listeria
monocytogenes)
6 / 12 VAL A 333
TYR A 351
VAL A 368
LEU A 387
LEU A 478
ILE A 484
5WP  A 901 (-3.6A)
5WP  A 901 (-4.5A)
5WP  A 901 (-4.5A)
5WP  A 901 (-4.3A)
5WP  A 901 (-4.7A)
None
1.32A 5hv1A-5fbuA:
51.3
5hv1A-5fbuA:
98.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6HU9_I_PCFI101_0
(CYTOCHROME B-C1
COMPLEX SUBUNIT 1,
MITOCHONDRIAL
CYTOCHROME B-C1
COMPLEX SUBUNIT 9
CYTOCHROME B-C1
COMPLEX SUBUNIT
RIESKE,
MITOCHONDRIAL)
5fbu PHOSPHOENOLPYRUVATE
SYNTHASE

(Listeria
monocytogenes)
5 / 11 ASP A 341
TYR A 800
VAL A 819
GLY A 821
SER A 390
None
None
None
None
5WP  A 901 ( 3.7A)
1.40A 6hu9A-5fbuA:
undetectable
6hu9E-5fbuA:
1.8
6hu9I-5fbuA:
undetectable
6hu9A-5fbuA:
19.72
6hu9E-5fbuA:
12.83
6hu9I-5fbuA:
6.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6HU9_T_PCFT101_0
(CYTOCHROME B-C1
COMPLEX SUBUNIT 1,
MITOCHONDRIAL
CYTOCHROME B-C1
COMPLEX SUBUNIT 9
CYTOCHROME B-C1
COMPLEX SUBUNIT
RIESKE,
MITOCHONDRIAL)
5fbu PHOSPHOENOLPYRUVATE
SYNTHASE

(Listeria
monocytogenes)
5 / 10 ASP A 341
TYR A 800
VAL A 819
GLY A 821
SER A 390
None
None
None
None
5WP  A 901 ( 3.7A)
1.38A 6hu9L-5fbuA:
undetectable
6hu9P-5fbuA:
undetectable
6hu9T-5fbuA:
undetectable
6hu9L-5fbuA:
19.72
6hu9P-5fbuA:
12.83
6hu9T-5fbuA:
6.35