SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '4RA'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBI_A_SAMA293_0
(GLYCINE
N-METHYLTRANSFERASE)
4ztc AMINOTRANSFERASE
HOMOLOG

(Campylobacter
jejuni)
5 / 12 ILE A 237
GLY A 182
SER A   6
GLY A 191
SER A 179
None
4RA  A 401 (-3.1A)
None
None
4RA  A 401 (-2.6A)
1.16A 1nbiA-4ztcA:
undetectable
1nbiA-4ztcA:
21.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBI_B_SAMB1293_0
(GLYCINE
N-METHYLTRANSFERASE)
4ztc AMINOTRANSFERASE
HOMOLOG

(Campylobacter
jejuni)
5 / 12 ILE A 237
GLY A 182
SER A   6
GLY A 191
SER A 179
None
4RA  A 401 (-3.1A)
None
None
4RA  A 401 (-2.6A)
1.16A 1nbiB-4ztcA:
undetectable
1nbiB-4ztcA:
21.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2X2N_B_X2NB1479_1
(LANOSTEROL
14-ALPHA-DEMETHYLASE)
4ztc AMINOTRANSFERASE
HOMOLOG

(Campylobacter
jejuni)
5 / 12 TYR A 180
PRO A  29
ALA A  28
ALA A  56
ALA A  59
None
None
None
4RA  A 401 (-3.4A)
None
1.30A 2x2nB-4ztcA:
undetectable
2x2nB-4ztcA:
21.69