SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '40K'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VMY_B_GLYB502_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)		 4xgk UDP-GALACTOPYRANOSE
MUTASE
(Corynebacterium
diphtheriae) 		4 / 8 TYR A 326
HIS A  61
HIS A 290
ARG A 288
 40K  A 402 ( 3.9A)
FDA  A 403 (-3.7A)
None
40K  A 402 (-3.1A)
 1.29A 2vmyA-4xgkA:
undetectable
2vmyB-4xgkA:
undetectable		 2vmyA-4xgkA:
20.91
2vmyB-4xgkA:
20.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EP4_A_DMEA601_1
(CHOLINESTERASE)		 4xgk UDP-GALACTOPYRANOSE
MUTASE
(Corynebacterium
diphtheriae) 		4 / 5 TYR A 326
GLU A 313
TYR A  83
HIS A 290
 40K  A 402 ( 3.9A)
None
None
None
 1.38A 6ep4A-4xgkA:
undetectable		 6ep4A-4xgkA:
14.96