SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '0W0'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GHM_A_CEDA1_1
(BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
7 / 12 SER A 294
LYS A 297
SER A 349
ASN A 351
LYS A 484
SER A 485
GLY A 486
0W0  A 601 (-1.4A)
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-2.9A)
0W0  A 601 (-3.4A)
0.50A 1ghmA-4fsfA:
16.3
1ghmA-4fsfA:
17.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_A_CFXA1300_1
(BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
6 / 12 SER A 294
LYS A 297
SER A 349
ASN A 351
LYS A 484
GLY A 486
0W0  A 601 (-1.4A)
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0.48A 1i2wA-4fsfA:
16.6
1i2wA-4fsfA:
21.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YMX_A_CFXA1001_1
(BETA-LACTAMASE
CTX-M-9)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
6 / 12 SER A 294
LYS A 297
SER A 349
ASN A 351
LYS A 484
GLY A 486
0W0  A 601 (-1.4A)
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0.39A 1ymxA-4fsfA:
17.5
1ymxA-4fsfA:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YMX_B_CFXB1002_1
(BETA-LACTAMASE
CTX-M-9)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
6 / 12 SER A 294
LYS A 297
SER A 349
ASN A 351
LYS A 484
GLY A 486
0W0  A 601 (-1.4A)
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0.37A 1ymxB-4fsfA:
17.6
1ymxB-4fsfA:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2CEO_A_T44A1395_1
(THYROXINE-BINDING
GLOBULIN)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 11 LEU A 391
LEU A 375
SER A 294
LYS A 297
LEU A 411
None
None
0W0  A 601 (-1.4A)
0W0  A 601 ( 4.2A)
None
1.00A 2ceoA-4fsfA:
undetectable
2ceoA-4fsfA:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DDW_B_PXLB1005_1
(PYRIDOXINE KINASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
4 / 7 SER A 538
LEU A 506
THR A 487
GLY A 531
None
None
0W0  A 601 (-3.7A)
None
0.90A 2ddwB-4fsfA:
undetectable
2ddwB-4fsfA:
19.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HLW_A_CE3A301_1
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 LYS A 297
SER A 349
ASN A 351
LYS A 484
GLY A 486
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0.49A 3hlwA-4fsfA:
17.4
3hlwA-4fsfA:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q07_A_WPPA300_1
(BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 LYS A 297
SER A 349
ASN A 351
LYS A 484
GLY A 486
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0.51A 3q07A-4fsfA:
17.4
3q07A-4fsfA:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q07_B_WPPB400_1
(BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 LYS A 297
SER A 349
ASN A 351
LYS A 484
GLY A 486
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0.39A 3q07B-4fsfA:
17.4
3q07B-4fsfA:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SH8_B_CEDB1_1
(BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
6 / 12 SER A 294
LYS A 297
SER A 349
ASN A 351
LYS A 484
GLY A 486
0W0  A 601 (-1.4A)
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0.54A 3sh8B-4fsfA:
16.9
3sh8B-4fsfA:
19.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUF_C_SUEC1201_1
(NS3 PROTEASE, NS4A
PROTEIN)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 11 TYR A 532
SER A 485
PHE A 507
ALA A 539
ALA A 474
None
0W0  A 601 (-2.9A)
None
None
None
1.07A 3sufC-4fsfA:
undetectable
3sufC-4fsfA:
16.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TM4_A_SAMA401_0
(TRNA (GUANINE
N2-)-METHYLTRANSFERA
SE TRM14)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 LEU A 405
GLY A 293
ALA A 508
PRO A 298
LEU A 461
None
0W0  A 601 ( 3.7A)
None
None
None
1.07A 3tm4A-4fsfA:
undetectable
3tm4A-4fsfA:
21.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TM4_B_SAMB401_0
(TRNA (GUANINE
N2-)-METHYLTRANSFERA
SE TRM14)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 LEU A 405
GLY A 293
ALA A 508
PRO A 298
LEU A 461
None
0W0  A 601 ( 3.7A)
None
None
None
1.04A 3tm4B-4fsfA:
undetectable
3tm4B-4fsfA:
21.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EUZ_A_MEMA401_1
(CARBAPENEM-HYDROLIZI
NG BETA-LACTAMASE
SFC-1)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
6 / 12 LYS A 297
SER A 349
ASN A 351
LYS A 484
GLY A 486
THR A 487
0W0  A 601 ( 4.2A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0W0  A 601 (-3.7A)
0.59A 4euzA-4fsfA:
17.3
4euzA-4fsfA:
22.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HFJ_H_SAMH301_0
(ADENINE SPECIFIC DNA
METHYLTRANSFERASE
(DPNA))
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 ALA A 363
PRO A 392
GLY A 408
THR A 295
TYR A 409
None
None
None
None
0W0  A 601 (-4.7A)
1.00A 5hfjH-4fsfA:
undetectable
5hfjH-4fsfA:
16.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B68_D_9F2D400_1
(BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 SER A 294
SER A 349
LYS A 484
GLY A 486
THR A 487
0W0  A 601 (-1.4A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0W0  A 601 (-3.7A)
0.38A 6b68D-4fsfA:
17.0
6b68D-4fsfA:
12.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6A_D_9F2D301_1
(BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 SER A 294
SER A 349
LYS A 484
GLY A 486
THR A 487
0W0  A 601 (-1.4A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0W0  A 601 (-3.7A)
0.36A 6b6aD-4fsfA:
16.3
6b6aD-4fsfA:
12.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B6F_A_9F2A301_1
(BETA-LACTAMASE)
4fsf PENICILLIN-BINDING
PROTEIN 3

(Pseudomonas
aeruginosa)
5 / 12 SER A 294
SER A 349
LYS A 484
GLY A 486
THR A 487
0W0  A 601 (-1.4A)
0W0  A 601 (-3.1A)
0W0  A 601 (-3.0A)
0W0  A 601 (-3.4A)
0W0  A 601 (-3.7A)
0.58A 6b6fA-4fsfA:
17.1
6b6fA-4fsfA:
12.79