SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '0FV'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LG1_A_SAMA301_0
(PROTEIN-LYSINE
METHYLTRANSFERASE
METTL21D)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
6 / 12 ALA A  23
GLY A  55
GLY A  70
LEU A 183
LEU A 186
ALA A  52
None
None
None
0FV  A 400 (-4.7A)
None
None
1.48A 4lg1A-5nx7A:
undetectable
4lg1A-5nx7A:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LG1_B_SAMB301_0
(PROTEIN-LYSINE
METHYLTRANSFERASE
METTL21D)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
6 / 12 ALA A  23
GLY A  55
GLY A  70
LEU A 183
LEU A 186
ALA A  52
None
None
None
0FV  A 400 (-4.7A)
None
None
1.47A 4lg1B-5nx7A:
undetectable
4lg1B-5nx7A:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LG1_C_SAMC301_0
(PROTEIN-LYSINE
METHYLTRANSFERASE
METTL21D)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
6 / 12 ALA A  23
GLY A  55
GLY A  70
LEU A 183
LEU A 186
ALA A  52
None
None
None
0FV  A 400 (-4.7A)
None
None
1.47A 4lg1C-5nx7A:
undetectable
4lg1C-5nx7A:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZ2_A_212A404_1
(GERMACRADIENOL/GEOSM
IN SYNTHASE)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
7 / 9 ASP A  81
ARG A 174
ASN A 220
SER A 224
GLU A 228
ARG A 314
TYR A 315
MG  A 404 (-2.6A)
0FV  A 400 ( 3.0A)
0FV  A 400 (-2.7A)
MG  A 402 (-2.2A)
MG  A 402 (-2.6A)
LA6  A 401 ( 3.8A)
0FV  A 400 ( 4.4A)
0.69A 5dz2A-5nx7A:
38.8
5dz2A-5nx7A:
27.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZ2_B_212B404_1
(GERMACRADIENOL/GEOSM
IN SYNTHASE)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
7 / 9 ASP A  81
ARG A 174
ASN A 220
SER A 224
GLU A 228
ARG A 314
TYR A 315
MG  A 404 (-2.6A)
0FV  A 400 ( 3.0A)
0FV  A 400 (-2.7A)
MG  A 402 (-2.2A)
MG  A 402 (-2.6A)
LA6  A 401 ( 3.8A)
0FV  A 400 ( 4.4A)
0.66A 5dz2B-5nx7A:
39.0
5dz2B-5nx7A:
27.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ERM_A_210A401_1
(FUSICOCCADIENE
SYNTHASE)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
8 / 10 ASP A  81
ARG A 174
ASN A 220
SER A 224
LYS A 227
GLU A 228
ARG A 314
TYR A 315
MG  A 404 (-2.6A)
0FV  A 400 ( 3.0A)
0FV  A 400 (-2.7A)
MG  A 402 (-2.2A)
0FV  A 400 ( 2.5A)
MG  A 402 (-2.6A)
LA6  A 401 ( 3.8A)
0FV  A 400 ( 4.4A)
0.56A 5ermA-5nx7A:
22.5
5ermA-5nx7A:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ERM_A_210A401_1
(FUSICOCCADIENE
SYNTHASE)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
5 / 10 ASP A  81
ARG A 174
ASN A 220
SER A 224
TYR A 315
MG  A 404 (-2.6A)
0FV  A 400 ( 3.0A)
0FV  A 400 (-2.7A)
MG  A 402 (-2.2A)
0FV  A 400 ( 4.4A)
1.23A 5ermA-5nx7A:
22.5
5ermA-5nx7A:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ERM_A_210A401_1
(FUSICOCCADIENE
SYNTHASE)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
5 / 10 ASP A  81
ASP A  85
LYS A 227
ARG A 314
TYR A 315
MG  A 404 (-2.6A)
MG  A 403 ( 4.6A)
0FV  A 400 ( 2.5A)
LA6  A 401 ( 3.8A)
0FV  A 400 ( 4.4A)
0.88A 5ermA-5nx7A:
22.5
5ermA-5nx7A:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ERM_A_210A401_1
(FUSICOCCADIENE
SYNTHASE)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
6 / 10 ASP A 233
ARG A 174
ASN A 220
SER A 224
LYS A 227
TYR A 315
None
0FV  A 400 ( 3.0A)
0FV  A 400 (-2.7A)
MG  A 402 (-2.2A)
0FV  A 400 ( 2.5A)
0FV  A 400 ( 4.4A)
1.19A 5ermA-5nx7A:
22.5
5ermA-5nx7A:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ERM_B_210B704_1
(FUSICOCCADIENE
SYNTHASE)
5nx7 PENTALENENE SYNTHASE
(Streptomyces
clavuligerus)
8 / 9 ASP A  81
ARG A 174
ASN A 220
SER A 224
LYS A 227
GLU A 228
ARG A 314
TYR A 315
MG  A 404 (-2.6A)
0FV  A 400 ( 3.0A)
0FV  A 400 (-2.7A)
MG  A 402 (-2.2A)
0FV  A 400 ( 2.5A)
MG  A 402 (-2.6A)
LA6  A 401 ( 3.8A)
0FV  A 400 ( 4.4A)
0.47A 5ermB-5nx7A:
9.1
5ermB-5nx7A:
23.12