Ligand ID: SMX Drugbank ID: DB01326(Cefamandole) Indication:For the treatment of serious infections caused by susceptible strains of microorganisms. |
DrReposER ID / Desc. | Hit PDBID |
Hit Macromolecule |
Res. Matches |
View | Interface | RMSD | Seq. Identity (%) |
HETATM | Dock | |
---|---|---|---|---|---|---|---|---|---|---|
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 1q2w | 3C-LIKE PROTEASE (SARSr-CoV) | 4 / 5 | ARG B 131THR B 199GLU B 288GLU B 290 | 1.59A | 23.19 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 1wnc | E2 GLYCOPROTEIN (SARSr-CoV) | 5 / 12 | ILE C1160THR B 923THR C 923GLY C 928ASP C 932 | 1.47A | 18.05 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 1zv8 | E2 GLYCOPROTEIN (SARSr-CoV) | 5 / 12 | SER K 24THR I 23THR K 23GLY K 28ASP K 32 | 1.49A | 9.43 | NoneNoneNoneNone NA K 205 (-2.5A) | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2ahm | REPLICASEPOLYPROTEIN 1AB,HEAVY CHAINREPLICASEPOLYPROTEIN 1AB,LIGHT CHAIN (SARSr-CoV) | 4 / 8 | LEU A 25ALA E 86THR E 89GLY A 69 | 1.14A | 13.96 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2amq | 3C-LIKEPROTEINASE (SARSr-CoV;syntheticconstruct) | 4 / 8 | LEU D 4ALA B 191THR B 190GLY B 174 | 1.26A | 5.45 | PJE D 5 ( 4.1A)02J D 1 ( 4.2A)NoneNone | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 2amq | 3C-LIKE PROTEINASE (SARSr-CoV) | 4 / 5 | ARG A 131THR A 199GLU A 288GLU A 290 | 1.60A | 23.05 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 2beq | SPIKE GLYCOPROTEIN (SARSr-CoV) | 5 / 12 | SER C 924THR B 923THR C 923GLY C 928ASP C 932 | 1.47A | 8.30 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 2cjr | NUCLEOCAPSID PROTEIN (SARS-COVTW1) | 5 / 12 | SER H 313ASN G 270THR G 297GLY G 296THR G 266 | 1.45A | 16.53 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 2d2d | 3C-LIKE PROTEINASE (SARSr-CoV) | 5 / 12 | ILE A 136ASN A 133THR A 175ARG A 105GLY A 183 | 1.50A | 23.05 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2dd8 | IGG LIGHT CHAIN (Homosapiens) | 4 / 8 | LEU L 46ALA L 43GLY L 57PRO L 55 | 1.24A | 19.79 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2fe8 | REPLICASEPOLYPROTEIN 1AB (SARSr-CoV) | 4 / 8 | LEU A 76ALA A 130GLY C 29PRO C 34 | 1.10A | 21.02 | NoneSO4 A 320 ( 4.1A)NoneNone | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2ga6 | ORF1A POLYPROTEIN (SARSr-CoV) | 4 / 8 | LEU N 45ALA M 104THR I 101LYS I 43 | 1.11A | 22.18 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 2gt8 | 3C-LIKE PROTEINASE (SARSr-CoV) | 4 / 5 | ILE A 286ARG A 131THR A 199GLU A 290 | 1.74A | 23.33 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2og3 | NUCLEOCAPSID PROTEIN (SARS-COVTor2) | 5 / 8 | LEU A 65ARG A 90ALA A 91GLY A 171PRO A 169 | 1.72A | 17.60 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 2ozk | URIDYLATE-SPECIFICENDORIBONUCLEASE (SARSr-CoV) | 4 / 5 | ILE A 252THR A 211GLU B 170GLU A 215 | 1.71A | 20.71 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 2pwx | 3C-LIKE PROTEINASE (SARS-COVBJ01) | 5 / 12 | ILE A 136ASN A 142THR A 196THR A 169GLY A 170 | 1.34A | 23.08 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2q6g | POLYPEPTIDE CHAINREPLICASEPOLYPROTEIN 1AB (SARS-COVBJ01) | 4 / 8 | LEU C 5ALA A 191THR A 190GLY A 174 | 1.27A | 6.57 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 2q6g | REPLICASEPOLYPROTEIN 1AB (SARS-COVBJ01) | 4 / 5 | ILE B 106ARG B 298THR B 292GLU B 290 | 1.68A | 22.59 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 2rhb | URIDYLATE-SPECIFICENDORIBONUCLEASE (SARSr-CoV) | 4 / 5 | ILE D 38THR F 47GLU D 41GLU F 91 | 1.68A | 21.45 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2xyq | PUTATIVE 2'-O-METHYLTRANSFERASE (SARSr-CoV) | 4 / 8 | LEU A 206ALA A 10TRP A 190GLY A 185 | 1.29A | 20.19 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 2xyr | PUTATIVE 2'-O-METHYLTRANSFERASE (SARSr-CoV) | 4 / 8 | LEU A 206ALA A 10TRP A 190GLY A 185 | 1.26A | 20.38 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 3bgf | F26G19 FABSPIKE PROTEIN S1 (Musmusculus;SARSr-CoV) | 4 / 8 | LEU H 100ALA L 51GLY S 490PRO H 98 | 1.31A | 21.71 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 3d0i | ACE2 (Pagumalarvata;Homosapiens;SARSr-CoV) | 4 / 5 | ILE A 126ARG A 115GLU A 181GLU A 182 | 1.63A | 17.50 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 3e91 | 3C-LIKE PROTEINASE (SARSr-CoV) | 4 / 5 | ILE A 106ARG A 298THR A 292GLU A 290 | 1.79A | 23.19 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 3f9e | 3C-LIKE PROTEINASE (SARSr-CoV) | 5 / 12 | ILE A 136ASN A 142THR A 196THR A 169GLY A 170 | 1.34A | 23.19 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 3i6k | HLA, A-2 (Homosapiens) | 4 / 8 | ALA E 184THR E 182GLY A 265PRO A 267 | 0.94A | 21.40 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 3r24 | 2'-O-METHYLTRANSFERASE (SARSr-CoV) | 4 / 8 | LEU A 206ALA A 10TRP A 190GLY A 185 | 1.33A | 21.17 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 3sci | ACE2 (Homosapiens) | 4 / 5 | ILE B 126ARG B 115GLU B 181GLU B 182 | 1.68A | 19.17 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 3scl | ACE2 (Pagumalarvata;Homosapiens;SARSr-CoV) | 4 / 5 | ILE B 126ARG B 115GLU B 181GLU B 182 | 1.66A | 18.99 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 3snd | 3C-LIKE PROTEINASEPEPTIDE ALDEHYDEINHIBITOR AC-ESTLQ-H (SARSr-CoV) | 4 / 8 | LEU C 4ALA A 191THR A 190GLY A 174 | 1.26A | 3.03 | ECC C 5 ( 4.4A)NoneNoneNone | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 3snd | 3C-LIKE PROTEINASE (SARSr-CoV) | 4 / 5 | ARG B 131THR B 199GLU B 288GLU B 290 | 1.56A | 22.89 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 3vb3 | 3C-LIKE PROTEINASE (SARSr-CoV) | 4 / 8 | LEU B 27ALA B 46THR B 45PRO B 39 | 1.28A | 22.89 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 3vb5 | 3C-LIKE PROTEINASEC4Z INHIBITOR (SARSr-CoV) | 4 / 8 | LEU F 4ALA B 191THR B 190GLY B 174 | 1.21A | 1.13 | 0JU F 5 ( 4.1A)PHQ F 1 ( 4.7A)NoneNone | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 3vb6 | 3C-LIKE PROTEINASEC6Z INHIBITOR (SARSr-CoV) | 4 / 8 | LEU F 6ALA B 191THR B 190GLY B 174 | 1.26A | 1.89 | 0JU F 7 ( 4.4A)NoneNoneNone | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 4mm3 | PAPAIN-LIKEPROTEINASEUBIQUITIN (Homosapiens;SARSr-CoV) | 4 / 5 | ILE A 44ARG A 72GLU A 51GLU B 168 | 1.42A | 13.99 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 4rna | PAPAIN-LIKE PROTEASE (Humanbetacoronavirus2cEMC/2012) | 5 / 12 | SER A 247SER A 167THR A 308GLY A 248THR A 249 | 1.37A | 22.63 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 4wy3 | 3C-LIKE PROTEINASE (SARSr-CoV) | 4 / 5 | ILE A 286ARG A 131THR A 199GLU A 290 | 1.67A | 22.89 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 5e6j | POLYUBIQUITIN-BREPLICASEPOLYPROTEIN 1AB (SARSr-CoV;syntheticconstruct) | 4 / 5 | ILE F 3THR F 12GLU D 71GLU A 68 | 1.46A | 13.58 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 5e6j | POLYUBIQUITIN-BREPLICASEPOLYPROTEIN 1AB (SARSr-CoV;syntheticconstruct) | 4 / 8 | LEU C 71ALA A 182THR A 201GLY C 35 | 1.25A | 13.58 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 5wrg | SPIKE GLYCOPROTEIN (SARSr-CoV) | 5 / 12 | ILE A 652THR A 678THR A 631GLY A 634ASP A 600 | 1.46A | 13.21 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 5x4r | S PROTEIN (MERS-CoV) | 4 / 8 | ARG A 46ALA A 312TRP A 253GLY A 276 | 1.05A | 20.80 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 5x59 | S PROTEIN (MERS-CoV) | 4 / 8 | ARG B 46ALA B 312TRP B 253GLY B 276 | 1.06A | 11.33 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 5x5b | SPIKE GLYCOPROTEIN (SARS-COVBJ01) | 5 / 12 | ILE B 674THR B 588GLY B 587THR B 585GLY B 298 | 1.45A | 12.95 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 5x5b | SPIKE GLYCOPROTEIN (SARS-COVBJ01) | 4 / 8 | LEU A 597ALA A 609TRP A 619PRO A 282 | 1.09A | 12.95 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 5x5f | S PROTEIN (MERS-CoV) | 5 / 12 | SER B 439SER B 440GLY B 578THR B 579GLY C 61 | 1.29A | 11.33 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6acg | ACE2 (Homosapiens) | 4 / 8 | LEU D 440THR D 276GLY D 286PRO D 284 | 1.14A | 19.17 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 6acj | SPIKE GLYCOPROTEIN (SARSr-CoV) | 5 / 12 | ILE A 674THR A 588GLY A 587THR A 585GLY A 298 | 1.37A | 13.38 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 6crv | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 5 / 12 | ILE A 674THR A 588GLY A 587THR A 585GLY A 298 | 1.52A | 12.87 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 6crw | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 4 / 5 | ILE C 687ARG C1089THR A 869GLU C1054 | 1.32A | 12.93 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6crx | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 4 / 8 | LEU A 224ARG C 342THR A 160GLY A 104 | 1.32A | 12.93 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 6cs0 | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 5 / 12 | SER A 591SER A 592THR A 588GLY A 587THR A 585 | 1.28A | 12.93 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 6jyt | HELICASE (SARSr-CoV) | 4 / 5 | ILE A 370ARG A 248THR A 250GLU A 244 | 1.70A | 18.26 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 6m17 | ACE2 (Homosapiens) | 4 / 5 | ILE B 126ARG B 115GLU B 181GLU B 182 | 1.75A | 14.83 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 6m18 | SODIUM-DEPENDENTNEUTRAL AMINO ACIDTRANSPORTER B(0)AT1 (Homosapiens) | 4 / 5 | ILE C 522ARG C 97GLU C 22GLU C 25 | 1.50A | 17.23 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6m18 | SODIUM-DEPENDENTNEUTRAL AMINO ACIDTRANSPORTER B(0)AT1 (Homosapiens) | 4 / 8 | LEU C 181ALA C 399THR C 396TRP C 135 | 1.25A | 17.23 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 6nb6 | SPIKE GLYCOPROTEIN (SARSr-CoV) | 5 / 12 | SER C 703THR C 705THR C1048GLY C1028GLY B 873 | 1.49A | 12.56 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6nb8 | S230 ANTIGEN-BINDING(FAB) FRAGMENT,HEAVY CHAIN (Homosapiens) | 4 / 8 | LEU H 203THR H 149GLY H 153PRO H 140 | 1.23A | 22.68 | None | ||
![]() | 3NY4_A_SMXA309_1 (BETA-LACTAMASE) | 6nur | NSP12 (SARSr-CoV) | 4 / 5 | ILE A 579ARG A 631THR A 686GLU A 658 | 1.55A | 14.32 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 6nur | NSP7NSP8 (SARSr-CoV) | 5 / 12 | ILE D 106SER C 54ASN D 100ARG D 190ASP D 101 | 1.39A | 22.96 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6w41 | CR3022 FAB HEAVYCHAIN (Homosapiens) | 4 / 8 | LEU H 189THR H 135GLY H 139PRO H 126 | 1.28A | 19.40 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6w41 | CR3022 FAB HEAVYCHAIN (Homosapiens) | 4 / 8 | LEU H 4ALA H 71THR H 77GLY H 28 | 1.61A | 19.40 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6w41 | CR3022 FAB HEAVYCHAIN (Homosapiens) | 4 / 8 | LEU H 4ALA H 71THR H 77GLY H 26 | 1.74A | 19.40 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6w41 | CR3022 FAB HEAVYCHAINCR3022 FAB LIGHTCHAIN (Homosapiens) | 4 / 8 | LEU H 45ALA H 88GLY H 104PRO L 44 | 1.64A | 19.40 | None | ||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 6w41 | CR3022 FAB HEAVYCHAIN (Homosapiens) | 5 / 12 | ILE H 98SER H 96THR H 31GLY H 94GLY H 35 | 1.60A | 19.40 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6w41 | CR3022 FAB HEAVYCHAINCR3022 FAB LIGHTCHAIN (Homosapiens) | 4 / 8 | ALA L 34TRP H 103GLY H 104PRO L 43 | 1.71A | 21.21 | None | ||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6yla | HEAVY CHAIN (Homosapiens) | 4 / 8 | LEU B 18ALA B 118THR B 91GLY B 8 | 1.24A | NoneNoneNoneMLI H 305 (-3.2A) | |||
![]() | 3NY4_A_SMXA310_1 (BETA-LACTAMASE) | 6ym0 | HEAVY CHAIN (Homosapiens) | 4 / 8 | LEU H 193THR H 139GLY H 143PRO H 130 | 1.44A | None | |||
![]() | 3NY4_A_SMXA308_1 (BETA-LACTAMASE) | 6yor | IGG H CHAIN (Homosapiens) | 5 / 12 | ILE H 20THR H 91THR H 116THR H 9GLY H 8 | 1.79A | 21.09 | None |