Ligand ID: PE2


Drugbank ID:
DB00299
(Penciclovir)



Indication:
Used to treat recurrent cold sores on the lips and face from various herpesvirus invections.


Get human targets for PE2 in PDB (known and potential targets)

RESULTS FROM SUB-STRUCTURAL SIMILARITY SEARCHES MAPPED TO LIGAND 'PE2' AND SARS-RELATED PROTEINS ONLY

1) User may click on the DrReposER ID (the first column) to get information on the binding sites and drug molecule.
2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).
3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera throuh AutoDock Vina.


DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
View Interface RMSD Seq.
Identity (%)
HETATM Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_B_PE2B2_1
(THYMIDINE KINASE)
3d0g ACE2
(Paguma
larvata;
Homo
sapiens;
SARSr-CoV)
5 / 12
ILE B 358
ILE B 379
GLN B 380
MET B 323
GLU B 375
1.74A20.10
None
None
None
None
ZN  B 901 (-4.0A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
3d0i ACE2
(Paguma
larvata;
Homo
sapiens;
SARSr-CoV)
5 / 12
TRP B 328
ILE B 358
ILE B 379
GLN B 380
MET B 323
1.56A20.10
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_B_PE2B2_1
(THYMIDINE KINASE)
3i6g HLA, A-2
(Homo
sapiens)
5 / 12
TRP D  51
ILE D  52
TYR D  59
ARG D 170
GLU D  63
1.69A24.85
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_B_PE2B2_1
(THYMIDINE KINASE)
3i6l HLA, A-24
(Homo
sapiens)
5 / 12
TRP D  51
ILE D  52
TYR D  59
ARG D 170
GLU D  63
1.70A26.10
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_B_PE2B2_1
(THYMIDINE KINASE)
3sci ACE2
(Homo
sapiens)
5 / 12
ILE A 358
ILE A 379
GLN A 380
MET A 323
GLU A 375
1.77A19.01
None
None
None
None
ZN  A 901 (-3.5A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
3scj ACE2
(Homo
sapiens)
5 / 12
TRP B 328
ILE B 358
ILE B 379
GLN B 380
MET B 323
1.53A19.01
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
3scl ACE2
(Paguma
larvata;
Homo
sapiens;
SARSr-CoV)
5 / 12
TRP B 328
ILE B 358
ILE B 379
GLN B 380
MET B 323
1.66A19.01
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
5c8s GUANINE-N7
METHYLTRANSFERASE
(SARSr-CoV)
5 / 12
GLU D 204
ILE D  74
GLN D  65
ARG D 180
GLU D  78
1.79A21.24
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
5x58 SPIKE GLYCOPROTEIN
(SARS-COV
BJ01)
5 / 12
ILE C 995
ILE A 995
GLN A 992
ARG C 996
GLU C 999
1.65A13.83
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_B_PE2B2_1
(THYMIDINE KINASE)
6crw SPIKE
GLYCOPROTEIN,FIBRITI
N
(SARSr-CoV)
5 / 12
ILE A 694
ILE B 878
GLN B 883
MET B 882
TYR B 886
1.57A14.36
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
6crz SPIKE
GLYCOPROTEIN,FIBRITI
N
(SARSr-CoV)
5 / 12
ILE A 694
ILE B 878
GLN B 883
MET B 882
TYR B 886
1.36A14.36
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
6iex MHC CLASS I ANTIGEN
(Homo
sapiens)
5 / 12
GLU A 163
ILE A  66
TYR A  99
ARG A  62
GLU A  63
1.73A24.78
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
6m1d ACE2
SODIUM-DEPENDENT
NEUTRAL AMINO ACID
TRANSPORTER B(0)AT1
(Homo
sapiens)
5 / 12
GLU A 217
ILE A 213
ILE B 757
ARG A 214
GLU A 456
1.74A20.33
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KI3_A_PE2A1_1
(THYMIDINE KINASE)
6vw1 ACE2
(Homo
sapiens)
5 / 12
TRP A 328
ILE A 358
ILE A 379
GLN A 380
MET A 323
1.64A20.10
None