Ligand ID: NMY Drugbank ID: DB00452(Framycetin)DB00994(Neomycin) Indication:For the treatment of bacterial blepharitis, bacterial bonjunctivitis, corneal injuries, corneal ulcers and meibomianitis. For the prophylaxis of ocular infections following foreign body removal;Topical uses include treatment for superficial eye infections caused by susceptible bacteria (used in combination with other antiinfectives), treatment of otitis externa caused by susceptible bacteria, treatment or prevention of bacterial infections in skin lesions, and use as a continuous short-term irrigant or rinse to prevent bacteriuria and gram negative rod bacteremia in abacteriuric patients with indwelling catheters. May be used orally to treat hepatic encephalopathy, as a perioperative prophylactic agent, and as an adjunct to fluid and electrolyte replacement in the treatment of diarrhea caused to enteropathogenic E. coli (EPEC). |
DrReposER ID / Desc. | Hit PDBID |
Hit Macromolecule |
Res. Matches |
View | Interface | RMSD | Seq. Identity (%) |
HETATM | Dock | |
---|---|---|---|---|---|---|---|---|---|---|
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 1x7q | HLA, A-11 (Homosapiens) | 5 / 10 | ASP A 137TYR A 123THR A 134THR A 143GLU A 148 | 1.71A | 22.55 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 1x7q | HLA, A-11 (Homosapiens) | 5 / 11 | ASP A 137TYR A 123THR A 134THR A 143GLU A 148 | 1.76A | 22.55 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 2acf | REPLICASEPOLYPROTEIN 1AB (SARS-COVTor2) | 5 / 12 | ASN D 222HIS D 227ASN D 219LEU D 305ILE D 217 | 1.78A | 18.70 | None | ||
![]() | 5IQE_C_NMYC600_1 (BIFUNCTIONAL AAC/APH) | 2ajf | ACE2 (Homosapiens) | 5 / 12 | ASP A 201ASP A 198GLU A 208GLU A 398GLU A 457 | 1.52A | 19.05 | None | ||
![]() | 5IQE_C_NMYC600_1 (BIFUNCTIONAL AAC/APH) | 2cme | HYPOTHETICAL PROTEIN5 (SARSr-CoV) | 5 / 12 | ASP E 63SER E 64ASN E 61GLU B 87GLU E 66 | 1.76A | 12.63 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 2fav | REPLICASEPOLYPROTEIN 1AB(PP1AB) (ORF1AB) (SARSr-CoV) | 5 / 12 | LEU B 83ASN B 32PRO A 137ASN B 5ILE B 122 | 1.49A | 18.30 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 2fe8 | REPLICASEPOLYPROTEIN 1AB (SARSr-CoV) | 5 / 10 | THR B 171THR A 159GLY A 161ASP A 109GLU B 204 | 1.75A | 24.02 | None BR A 319 ( 4.5A)NoneNoneNone | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 2g9t | ORF1A POLYPROTEIN (SARSr-CoV) | 5 / 11 | ASP S 22THR X 58HIS X 48THR X 49GLY X 50 | 1.73A | 17.71 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 2g9t | ORF1A POLYPROTEIN (SARSr-CoV) | 5 / 12 | LEU E 75TYR E 76ASN I 40PHE L 19HIS I 80 | 1.78A | 15.99 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 2gri | NSP3 (SARSr) | 5 / 10 | ASP A 111TYR A 108GLY A 95ASP A 92GLU A 96 | 1.43A | 17.34 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 2h85 | PUTATIVE ORF1ABPOLYPROTEIN (SARSr-CoV) | 5 / 10 | TYR A 193ASP A 296THR A 195GLY A 300GLU A 210 | 1.55A | 21.26 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 2og3 | NUCLEOCAPSID PROTEIN (SARS-COVTor2) | 5 / 11 | ASN A 76TYR A 112ASP A 83THR A 149GLY A 148 | 1.76A | 18.38 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 2ozk | URIDYLATE-SPECIFICENDORIBONUCLEASE (SARSr-CoV) | 5 / 12 | LEU A 254ASN C 277LEU A 331PHE A 302ILE A 235 | 1.53A | 20.64 | None | ||
![]() | 2B0Q_A_NMYA305_1 (AMINOGLYCOSIDE3'-PHOSPHOTRANSFERASE) | 2ozk | URIDYLATE-SPECIFICENDORIBONUCLEASE (SARSr-CoV) | 5 / 12 | GLU A 68GLU A 145SER A 161ARG A 126ASP A 124 | 1.52A | 24.79 | None | ||
![]() | 2B0Q_A_NMYA305_1 (AMINOGLYCOSIDE3'-PHOSPHOTRANSFERASE) | 2rhb | URIDYLATE-SPECIFICENDORIBONUCLEASE (SARSr-CoV) | 5 / 12 | GLU A 68SER A 197GLU A 201ASP A 202ASP A 267 | 1.50A | 23.97 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 2w2g | NSP3 (SARSr-CoV) | 5 / 10 | TYR B 483ASP B 481THR B 450GLY B 452GLU B 432 | 1.66A | 23.93 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 2wct | NSP3 (SARSr-CoV) | 5 / 11 | TYR C 483ASP C 481ASN C 409THR C 450GLY C 452 | 1.64A | 23.93 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 3bgf | F26G19 FABSPIKE PROTEIN S1 (Musmusculus;SARSr-CoV) | 5 / 11 | TYR H 52ASP S 429THR S 425GLY S 391ASP S 393 | 1.59A | 21.33 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 3bgf | F26G19 FABSPIKE PROTEIN S1 (Musmusculus;SARSr-CoV) | 5 / 10 | TYR H 52ASP S 429THR S 425GLY S 391ASP S 393 | 1.63A | 21.33 | None | ||
![]() | 5IQE_C_NMYC600_1 (BIFUNCTIONAL AAC/APH) | 3d0h | ACE2 (Pagumalarvata;Homosapiens;SARSr-CoV) | 5 / 12 | ASP B 201ASP B 198GLU B 208GLU B 398GLU B 457 | 1.54A | 19.29 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 3d0i | ACE2 (Pagumalarvata;Homosapiens;SARSr-CoV) | 5 / 12 | LEU A 148HIS A 493LYS A 481ASP A 499LEU A 456 | 1.71A | 20.52 | NoneNone CL A 902 ( 4.1A) CL A 902 (-4.8A)None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 3f9g | 3C-LIKE PROTEINASE (SARSr-CoV) | 5 / 11 | ASP B 197ASP A 216THR A 280THR B 169GLY B 170 | 1.70A | 24.77 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 3f9g | 3C-LIKE PROTEINASE (SARSr-CoV) | 5 / 10 | ASP B 197ASP A 216THR A 280THR B 169GLY B 170 | 1.71A | 24.77 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 3f9h | 3C-LIKE PROTEINASE (SARSr-CoV) | 5 / 10 | ASP A 197ASP B 216THR B 280THR A 169GLY A 170 | 1.68A | 24.32 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 3f9h | 3C-LIKE PROTEINASE (SARSr-CoV) | 5 / 11 | ASP A 197ASP B 216THR B 280THR A 169GLY A 170 | 1.67A | 24.32 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 3i6g | HLA, A-2 (Homosapiens) | 5 / 11 | ASP A 137TYR A 123THR A 134THR A 143GLU A 148 | 1.69A | 23.68 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 3i6k | HLA, A-2 (Homosapiens) | 5 / 10 | TYR A 209ASP A 29THR A 182THR A 178GLY A 175 | 1.73A | 23.68 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 3i6l | HLA, A-24 (Homosapiens) | 5 / 10 | ASP D 137TYR D 123THR D 134THR D 143GLU D 148 | 1.70A | 22.58 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 3i6l | HLA, A-24 (Homosapiens) | 5 / 11 | ASP D 137TYR D 123THR D 134THR D 143GLU D 148 | 1.79A | 22.58 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 3scj | ACE2SPIKE GLYCOPROTEIN (Homosapiens;SARSr-CoV) | 5 / 11 | TYR F 436ASP B 38THR F 433THR F 487ASP B 355 | 1.80A | 17.95 | None | ||
![]() | 5IQE_A_NMYA600_1 (BIFUNCTIONAL AAC/APH) | 3sck | ACE2 (Pagumalarvata;Homosapiens;SARSr-CoV) | 5 / 11 | ASP B 201ASP B 198GLU B 208GLU B 398GLU B 457 | 1.60A | 19.34 | None | ||
![]() | 5IQE_C_NMYC600_1 (BIFUNCTIONAL AAC/APH) | 3sck | ACE2 (Pagumalarvata;Homosapiens;SARSr-CoV) | 5 / 12 | ASP B 201ASP B 198GLU B 208GLU B 398GLU B 457 | 1.40A | 19.34 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 3scl | ACE2 (Pagumalarvata;Homosapiens;SARSr-CoV) | 5 / 11 | ASP B 206ASN B 394TYR B 521ASP B 382GLU B 375 | 1.76A | 20.03 | NoneNoneNoneNone ZN B 901 (-3.6A) | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 4ovz | PAPAIN-LIKEPROTEINASE (SARS-COVUrbani) | 5 / 10 | TYR A 155ASP B 77THR B 75HIS A 176GLU A 180 | 1.72A | 23.95 | None | ||
![]() | 5DV4_A_NMYA601_2 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 5c8t | GUANINE-N7METHYLTRANSFERASE (SARSr-CoV) | 3 / 3 | GLU D 295TRP D 292ASN D 422 | 1.77A | 21.01 | None | ||
![]() | 5DV4_A_NMYA601_2 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 5tl7 | REPLICASEPOLYPROTEIN 1ABUBIQUITIN-LIKEPROTEIN ISG15 (Musmusculus;SARSr-CoV) | 3 / 3 | GLU B 162TRP A 121ASN B 157 | 1.58A | 21.29 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 5x58 | SPIKE GLYCOPROTEIN (SARS-COVBJ01) | 5 / 10 | TYR C 352ASP A 967THR C 372GLY C 368GLU A 970 | 1.49A | 13.43 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 5x5b | SPIKE GLYCOPROTEIN (SARS-COVBJ01) | 5 / 11 | TYR B 352ASP C 967THR B 372GLY B 368GLU C 970 | 1.51A | 13.43 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 5x5b | SPIKE GLYCOPROTEIN (SARS-COVBJ01) | 5 / 12 | TYR A 195ASN B 733ASP C 415LEU C 412PHE C 451 | 1.74A | 14.80 | None | ||
![]() | 5IQE_C_NMYC600_1 (BIFUNCTIONAL AAC/APH) | 5x5c | S PROTEIN (MERS-CoV) | 5 / 12 | ASP C 338SER C 345ASN C 342SER C 364GLU A 818 | 1.45A | 12.54 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 5x5f | S PROTEIN (MERS-CoV) | 5 / 12 | LEU B 735ASN C 832PRO B 658ASP B 343PHE B 674 | 1.43A | 14.94 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 6acd | SPIKE GLYCOPROTEIN (SARSr-CoV) | 5 / 11 | TYR B 352ASP A 967THR B 372GLY B 368GLU A 970 | 1.40A | 13.54 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 6acd | SPIKE GLYCOPROTEIN (SARSr-CoV) | 5 / 10 | TYR A 352ASP C 967THR A 372GLY A 368GLU C 970 | 1.42A | 13.54 | None | ||
![]() | 5IQE_A_NMYA600_1 (BIFUNCTIONAL AAC/APH) | 6acj | ACE2 (Homosapiens) | 5 / 11 | ASP D 201ASP D 198GLU D 208GLU D 398GLU D 457 | 1.71A | 19.05 | None | ||
![]() | 5IQE_C_NMYC600_1 (BIFUNCTIONAL AAC/APH) | 6acj | ACE2 (Homosapiens) | 5 / 12 | ASP D 201ASP D 198GLU D 208GLU D 398GLU D 457 | 1.57A | 19.05 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 6crv | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 5 / 11 | TYR A 899ASN A 896THR A 894GLY C1075GLU C1074 | 1.67A | 13.29 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6crx | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 5 / 12 | LEU C 736ASN C 746ASP C 719ASN B 304LEU B 615 | 1.63A | 15.12 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 6crz | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 5 / 10 | TYR A 410ASP A 385ASP A 414GLY A 418ASP A 376 | 1.33A | 13.29 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 6cs0 | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 5 / 11 | TYR A 410ASP A 385ASP A 414GLY A 418ASP A 376 | 1.29A | 13.29 | None | ||
![]() | 2B0Q_A_NMYA305_1 (AMINOGLYCOSIDE3'-PHOSPHOTRANSFERASE) | 6cs0 | SPIKEGLYCOPROTEIN,FIBRITIN (SARSr-CoV) | 5 / 12 | ASP A 560SER A 561ARG B 48ASP A 554ASP B 44 | 1.66A | 12.65 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6cs2 | ACE2 (Homosapiens) | 5 / 12 | LEU D 148HIS D 493LYS D 481ASP D 499LEU D 456 | 1.64A | 22.11 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 6cs2 | ACE2 (Homosapiens) | 5 / 11 | TYR D 183ASP D 509ASN D 117TYR D 199GLY D 104 | 1.50A | 19.87 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6jyt | HELICASE (SARSr-CoV) | 5 / 12 | LEU A 412TYR A 120PRO A 175ASN A 179LEU A 227 | 1.60A | 21.56 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6lzg | ACE2 (Homosapiens) | 5 / 12 | LEU A 148HIS A 493LYS A 481ASP A 499LEU A 456 | 1.65A | 20.92 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6m0j | ACE2 (Homosapiens) | 5 / 12 | LEU A 148HIS A 493LYS A 481ASP A 499LEU A 456 | 1.63A | 22.11 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 6m0j | ACE2 (Homosapiens) | 5 / 11 | ASN A 437TYR A 587ASP A 431THR A 434HIS A 540 | 1.65A | 19.87 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6m17 | ACE2 (Homosapiens) | 5 / 12 | LEU B 148HIS B 493LYS B 481ASP B 499LEU B 456 | 1.76A | 19.18 | None | ||
![]() | 5DV4_A_NMYA601_1 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6m18 | SODIUM-DEPENDENTNEUTRAL AMINO ACIDTRANSPORTER B(0)AT1 (Homosapiens) | 5 / 12 | LEU C 18ASN C 293LEU C 88PHE C 514ILE C 92 | 1.58A | 21.75 | None | ||
![]() | 5IQE_C_NMYC600_1 (BIFUNCTIONAL AAC/APH) | 6m18 | ACE2 (Homosapiens) | 5 / 12 | ASP B 201ASP B 198GLU B 208GLU B 398GLU B 457 | 1.59A | 16.58 | None | ||
![]() | 5DV4_A_NMYA601_2 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6m18 | ACE2 (Homosapiens) | 3 / 3 | GLU D 479TRP D 478ASN D 674 | 1.46A | 19.18 | None | ||
![]() | 2B0Q_A_NMYA305_1 (AMINOGLYCOSIDE3'-PHOSPHOTRANSFERASE) | 6m1d | ACE2 (Homosapiens) | 5 / 12 | GLU B 457ASP B 206SER B 511ARG B 219ASP B 198 | 1.73A | 14.43 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 6m1d | ACE2 (Homosapiens) | 5 / 11 | TYR B 183ASP B 509GLY B 200ASP B 201GLU B 197 | 1.56A | 16.14 | None | ||
![]() | 5IQE_B_NMYB600_1 (BIFUNCTIONAL AAC/APH) | 6m1d | ACE2 (Homosapiens) | 5 / 10 | ASP B 206TYR B 207GLU B 457TYR B 515GLU B 402 | 1.44A | 16.58 | None | ||
![]() | 5DV4_A_NMYA601_2 (CCR4-NOTTRANSCRIPTIONCOMPLEX SUBUNIT6-LIKE) | 6m1d | SODIUM-DEPENDENTNEUTRAL AMINO ACIDTRANSPORTER B(0)AT1 (Homosapiens) | 3 / 3 | GLU C 179TRP C 176ASN C 142 | 1.75A | 21.75 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 6nb8 | S230 ANTIGEN-BINDING(FAB) FRAGMENT,LIGHT CHAIN (Homosapiens) | 5 / 11 | TYR L 145ASP L 172THR L 177ASP L 87GLU L 86 | 1.26A | 20.00 | None | ||
![]() | 6MB5_A_NMYA301_0 (AAC(3)-IIIB PROTEIN) | 6nus | NSP12 (SARSr-CoV) | 5 / 11 | TYR A 238ASP A 208THR A 206GLY A 214ASP A 211 | 1.62A | 14.85 | None | ||
![]() | 6MB9_A_NMYA303_0 (AAC(3)-IIIB PROTEIN) | 6nus | NSP12 (SARSr-CoV) | 5 / 10 | TYR A 238ASP A 208THR A 206GLY A 214ASP A 211 | 1.59A | 14.85 | None |