PDB ID: 3sne


Macromolecule:
3C-LIKE PROTEINASE
PEPTIDE ALDEHYDE
INHIBITOR AC-ESTLQ-H


Source Organism:
SARSr-CoV


Gene names:
-


UniProt ID:
P0C6U8

SIMILAR PATTERN OF AMINO ACIDS MAPPED TO PDBID '3sne'

1) User may click on the DrReposER ID (the first column) to get information on the binding sites and drug molecule.
2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).
3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera through AutoDock Vina.


DrReposER ID / Desc. Drug Res.
Matches
View Interface RMSD Seq.
Identity (%)
HETATM Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OG9_B_TESB502_1
(-)
Testosterone5 / 12
LEU A 268
LEU A 208
TRP A 207
ILE A 286
LEU A 272
1.57A21.96
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N16_A_CHDA301_0
(CARBONIC ANHYDRASE 2)
Cholic Acid4 / 8
HIS A 163
HIS A 172
PHE A 181
THR H   3
1.31A23.24
ECC  H   5 ( 4.0A)
None
None
ECC  H   5 ( 4.9A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LJD_A_RTLA201_0
(RETINOL-BINDING
PROTEIN 1)
Vitamin A5 / 9
LEU A  87
THR A  25
ILE A  43
GLN A 189
LEU H   4
1.41A20.13
None
None
None
None
ECC  H   5 ( 4.5A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3G1U_C_ADNC438_1
(ADENOSYLHOMOCYSTEINA
SE)
Adenosine5 / 12
LEU H   4
HIS A 164
ASP A 187
LEU A  86
GLY A 146
1.79A2.00
ECC  H   5 ( 4.5A)
None
None
None
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ROX_B_T44B128_1
(TRANSTHYRETIN)
Levothyroxine4 / 6
LEU A 177
GLU A 178
LEU A  30
THR A  35
1.30A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKJ_B_SUZB201_1
(TRANSTHYRETIN)
Sulindac4 / 8
ALA A 191
LEU A 167
SER H   2
THR A 190
1.27A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKL_A_SUZA201_1
(TRANSTHYRETIN)
Sulindac4 / 7
ALA A 191
LEU A 167
SER H   2
THR A 190
1.22A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AGM_A_ACRA495_1
(GLUCOAMYLASE-471)
Acarbose5 / 12
ALA A 211
ARG A 279
ASP A 216
GLY A 275
GLU A 270
1.68A21.63
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CS9_D_NILD600_1
(PROTO-ONCOGENE
TYROSINE-PROTEIN
KINASE ABL1)
Nilotinib5 / 12
ALA A 129
VAL A 157
ILE A 152
THR A 111
ALA A   7
1.34A20.72
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1H4O_D_BEZD1162_0
(PEROXIREDOXIN 5)
Benzoic Acid5 / 9
PRO A 241
THR A 201
LEU A 227
PHE A 230
THR A 243
1.66A21.99
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FHW_A_ACRA801_1
(GLUCOAMYLASE P)
Acarbose5 / 12
ALA A 211
ARG A 279
ASP A 216
GLY A 275
GLU A 270
1.63A19.69
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T7I_A_017A200_1
(POL POLYPROTEIN)
Darunavir5 / 10
LEU H   4
GLY A 174
ALA A 173
GLY A 138
THR H   3
1.43A16.67
ECC  H   5 ( 4.5A)
None
None
None
ECC  H   5 ( 4.9A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXM_A_IMNA2001_1
(SERUM ALBUMIN)
Indomethacin4 / 8
SER H   2
ALA A 173
ARG A  40
LEU A  27
1.19A5.32
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CFQ_B_DIFB1_1
(TRANSTHYRETIN)
Diclofenac4 / 7
ALA A 191
LEU A 167
SER H   2
THR A 190
1.23A17.78
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DVX_B_DIFB125_2
(TRANSTHYRETIN)
Diclofenac4 / 7
ALA A 191
LEU A 167
SER H   2
THR A 190
1.28A16.94
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NBI_C_SAMC2293_0
(GLYCINE
N-METHYLTRANSFERASE)
S-Adenosylmethionine5 / 12
GLY A 170
THR A 169
SER H   2
GLY A 138
HIS A 163
1.46A23.08
None
None
None
None
ECC  H   5 ( 4.0A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OZK_B_T44B128_1
(TRANSTHYRETIN)
Levothyroxine4 / 7
ALA A 191
LEU A 167
SER H   2
THR A 190
1.29A18.75
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKJ_A_SUZA201_1
(TRANSTHYRETIN)
Sulindac4 / 7
ALA A 191
LEU A 167
SER H   2
THR A 190
1.27A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CFQ_A_DIFA1_1
(TRANSTHYRETIN)
Diclofenac4 / 6
ALA A 191
LEU A 167
SER H   2
THR A 190
1.17A17.78
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TYR_A_9CRA131_1
(TRANSTHYRETIN)
Alitretinoin4 / 6
ALA A 191
LEU A 167
SER H   2
THR A 190
1.23A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GGU_B_017B201_2
(PROTEASE)
Darunavir5 / 9
LEU H   4
GLY A 174
ALA A 173
GLY A 138
THR H   3
1.42A6.90
ECC  H   5 ( 4.5A)
None
None
None
ECC  H   5 ( 4.9A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1CMC_B_SAMB105_0
(MET REPRESSOR)
S-Adenosylmethionine5 / 10
ARG A 188
LEU H   4
LEU A 167
ALA A 173
GLY A 183
1.60A17.31
None
ECC  H   5 ( 4.5A)
None
None
MES  A2308 (-3.5A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FGZ_B_CQAB302_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE)
Amodiaquine4 / 8
SER H   2
TYR A 182
ARG A 105
GLY A 179
1.57A2.81
None
None
MES  A2308 (-3.6A)
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R75_A_BEZA701_0
(ANTHRANILATE/PARA-AM
INOBENZOATE
SYNTHASES COMPONENT
I)
Benzoic Acid5 / 12
GLY A 170
THR A 169
GLU A 166
SER H   2
THR H   3
1.47A18.49
None
None
ECC  H   5 ( 3.9A)
None
ECC  H   5 ( 4.9A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKK_A_SUZA201_1
(TRANSTHYRETIN)
Sulindac4 / 8
ALA A 191
LEU A 167
SER H   2
THR A 190
1.22A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TYR_B_9CRB130_1
(TRANSTHYRETIN)
Alitretinoin4 / 7
THR A 135
ALA A 173
LEU H   4
VAL A 171
1.24A19.12
None
None
ECC  H   5 ( 4.5A)
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ICT_D_T44D129_1
(TRANSTHYRETIN)
Levothyroxine4 / 6
ALA A 191
LEU A 167
SER H   2
THR A 190
1.25A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6A7J_A_TESA502_0
(CYTOCHROME P450)
Testosterone4 / 7
PHE A 291
LEU A 208
ALA A 210
ALA A 211
1.12A22.06
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKL_B_SUZB201_1
(TRANSTHYRETIN)
Sulindac4 / 8
ALA A 191
LEU A 167
SER H   2
THR A 190
1.23A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1AM6_A_HAEA555_1
(CARBONIC ANHYDRASE)
Acetohydroxamic Acid4 / 7
HIS A 163
HIS A 172
LEU A 167
THR H   3
1.57A23.08
ECC  H   5 ( 4.0A)
None
None
ECC  H   5 ( 4.9A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PS9_A_SAMA670_0
(TRNA
5-METHYLAMINOMETHYL-
2-THIOURIDINE
BIOSYNTHESIS
BIFUNCTIONAL PROTEIN
MNMC)
S-Adenosylmethionine5 / 12
PHE A   8
ASP A 295
GLY A 149
PHE A 150
ASN A 151
1.56A18.13
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1OC3_B_BEZB201_0
(PEROXIREDOXIN 5)
Benzoic Acid5 / 9
PRO A 241
THR A 201
LEU A 227
PHE A 230
THR A 243
1.65A22.30
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_A_ACTA305_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)
Acetic acid3 / 3
THR H   3
MET A 165
HIS A 172
1.48A1.74
ECC  H   5 ( 4.9A)
None
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6APH_A_ADNA501_1
(ADENOSYLHOMOCYSTEINA
SE)
Adenosine5 / 12
LEU H   4
HIS A 164
ASP A 187
LEU A  86
GLY A 146
1.77A1.89
ECC  H   5 ( 4.5A)
None
None
None
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X1F_J_CHDJ101_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
Cholic Acid4 / 6
LEU H   4
TYR A 161
THR A 135
LEU A 167
1.54A0.58
7.69
ECC  H   5 ( 4.5A)
None
None
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKK_B_SUZB201_1
(TRANSTHYRETIN)
Sulindac4 / 7
ALA A 191
LEU A 167
SER H   2
THR A 190
1.26A19.12
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XCT_X_CPFX1020_1
(DNA GYRASE SUBUNIT
B, DNA GYRASE
SUBUNIT A)
Ciprofloxacin4 / 4
ARG A 131
GLY A 138
GLU A 290
SER H   2
1.65A18.36
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CS9_A_NILA600_2
(PROTO-ONCOGENE
TYROSINE-PROTEIN
KINASE ABL1)
Nilotinib5 / 12
ALA A 129
VAL A 157
ILE A 152
THR A 111
ALA A   7
1.25A20.72
None
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4NJT_B_017B101_2
(PROTEASE)
Darunavir5 / 10
LEU H   4
GLY A 174
ALA A 173
GLY A 138
THR H   3
1.44A42.86
ECC  H   5 ( 4.5A)
None
None
None
ECC  H   5 ( 4.9A)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CS9_C_NILC600_1
(PROTO-ONCOGENE
TYROSINE-PROTEIN
KINASE ABL1)
Nilotinib5 / 12
ALA A 129
VAL A 157
ILE A 152
THR A 111
ALA A   7
1.24A20.72
None
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKI_B_IMNB201_1
(TRANSTHYRETIN)
Indomethacin4 / 6
ALA A 191
LEU A 167
SER H   2
THR A 190
1.29A19.12
None