PDB ID: 1yo4 Macromolecule: HYPOTHETICAL PROTEIN X4 Source Organism: SARSr-CoV Gene names: - UniProt ID: P59635 |
SIMILAR PATTERN OF AMINO ACIDS MAPPED TO PDBID '1yo4'
1) User may click on the DrReposER ID (the first column) to get information on the binding sites and drug molecule.2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera through AutoDock Vina.DrReposER ID / Desc. | Drug | Res. Matches |
View | Interface | RMSD | Seq. Identity (%) |
HETATM | Dock | |
---|---|---|---|---|---|---|---|---|---|
![]() | 5PHH_A_LDPA414_1 (LYSINE-SPECIFICDEMETHYLASE 4D) | Dopamine | 4 / 6 | GLU A 77ARG A 63ALA A 64SER A 66 | 1.73A | 11.26 | None | ||
![]() | 4WCX_C_SAMC503_0 (BIOTIN AND THIAMINSYNTHESIS ASSOCIATED) | S-Adenosylmethionine | 5 / 12 | TYR A 3TYR A 5GLU A 81PHE A 48HIS A 4 | 1.52A | 9.85 | None | ||
![]() | 2C6N_B_LPRB705_2 (ANGIOTENSIN-CONVERTING ENZYME, SOMATICISOFORM) | Lisinopril | 3 / 3 | ALA A 40THR A 13PHE A 31 | 1.14A | 10.91 | None | ||
![]() | 4K0B_B_SAMB504_1 (S-ADENOSYLMETHIONINESYNTHASE) | S-Adenosylmethionine | 4 / 8 | HIS A 47ALA A 49TYR A 25SER A 29 | 1.26A | 11.99 | None | ||
![]() | 2XZ5_C_ACHC1211_0 (SOLUBLEACETYLCHOLINERECEPTOR) | Acetylcholine | 4 / 8 | THR A 46GLN A 61TYR A 5CYH A 43 | 1.50A | 18.05 | None | ||
![]() | 1P6K_A_MTLA870_0 (NITRIC-OXIDESYNTHASE, BRAIN) | Mannitol | 4 / 8 | SER A 29GLN A 61PHE A 48ASN A 28 | 1.69A | 12.67 | None | ||
![]() | 2XRZ_B_ACTB1463_0 (DEOXYRIBODIPYRIMIDINE PHOTOLYASE) | Acetic acid | 4 / 7 | VAL A 9VAL A 67GLY A 11THR A 12 | 1.09A | 11.91 | None | ||
![]() | 5KI6_A_IPHA901_0 (PROTEIN ARGONAUTE-2) | Phenol | 4 / 5 | LEU A 16TYR A 25LEU A 62TYR A 60 | 1.80A | 8.33 | None | ||
![]() | 3T3S_B_9PLB1_1 (CYTOCHROME P450 2A13) | Pilocarpine | 4 / 6 | PHE A 39PHE A 31PHE A 50ALA A 49 | 1.53A | 11.30 | None | ||
![]() | 2ZMB_A_PXBA692_1 (LACTOTRANSFERRIN) | Parecoxib | 3 / 3 | PRO A 19GLU A 1TYR A 60 | 1.58A | 14.88 | None | ||
![]() | 1ICU_A_NIOA221_1 (OXYGEN-INSENSITIVENAD(P)HNITROREDUCTASE) | Niacin | 4 / 6 | THR A 59PHE A 48PHE A 39GLU A 26 | 1.49A | 14.98 | None | ||
![]() | 3LN1_C_CELC682_2 (PROSTAGLANDIN G/HSYNTHASE 2) | Celecoxib | 4 / 7 | ARG A 65SER A 68LEU A 82ILE A 73 | 1.54A | 8.51 | None | ||
![]() | 3S8P_B_SAMB500_0 (HISTONE-LYSINEN-METHYLTRANSFERASESUV420H1) | S-Adenosylmethionine | 5 / 12 | ALA A 40HIS A 58TYR A 60CYH A 52CYH A 20 | 1.54A | 14.65 | None | ||
![]() | 2V0M_D_KLND1498_1 (CYTOCHROME P450 3A4) | Ketoconazole | 5 / 11 | LEU A 41PHE A 48ALA A 49THR A 59GLU A 81 | 1.69A | 10.15 | None | ||
![]() | 2OMB_D_IPHD2002_0 (BENCE JONES KWRPROTEIN -IMMUNOGLOBULIN LIGHTCHAIN) | Phenol | 4 / 7 | HIS A 58TYR A 3HIS A 4TYR A 60 | 1.62A | 16.83 | None | ||
![]() | 2HC4_A_VDXA525_2 (VITAMIN D RECEPTOR) | Calcitriol | 4 / 7 | LEU A 16LEU A 41ARG A 10TYR A 5 | 1.12A | 15.16 | None | ||
![]() | 4IIZ_A_LURA201_1 (TRANSTHYRETIN) | Lumiracoxib | 3 / 3 | LYS A 38LEU A 15ALA A 35 | 1.68A | 21.58 | None | ||
![]() | 3S8P_A_SAMA500_0 (HISTONE-LYSINEN-METHYLTRANSFERASESUV420H1) | S-Adenosylmethionine | 5 / 12 | ALA A 40HIS A 58TYR A 60CYH A 52CYH A 20 | 1.53A | 14.65 | None | ||
![]() | 4WG0_A_CHDA103_0 (NUCLEAR RECEPTORCOACTIVATOR 2) | Cholic Acid | 5 / 8 | LEU A 16LEU A 41GLU A 7ALA A 64LEU A 62 | 1.62A | 9.20 | None | ||
![]() | 5DZK_P_BEZP801_1 (ATP-DEPENDENT CLPPROTEASE PROTEOLYTICSUBUNIT 2BEZ-LEU-LEU) | Benzoic Acid | 4 / 6 | PHE A 50ALA A 49HIS A 4LEU A 2 | 1.62A | 17.8711.11 | None | ||
![]() | 3U8Q_A_NPUA7231_1 (LACTOTRANSFERRIN) | Phenylpropanolamine | 4 / 5 | THR A 46GLY A 27PRO A 30ASN A 28 | 1.75A | 15.46 | None | ||
![]() | 3LB3_A_4CHA191_0 (DEHALOPEROXIDASE A) | Parachlorophenol | 4 / 6 | PHE A 39PHE A 48TYR A 25VAL A 14 | 1.45A | 18.46 | None | ||
![]() | 5BTC_G_CPFG101_1 (DNA GYRASE SUBUNIT ADNA GYRASE SUBUNIT BDNA SUBSTRATE 24-MERTTACGTGCATAGTCATTCATGACC) | Ciprofloxacin | 4 / 6 | ARG A 57GLY A -2THR A 59GLU A 1 | 1.48A | 12.2115.16 | None | ||
![]() | 5VLM_H_CVIH301_0 (REGULATORY PROTEINTETR) | Gentian Violet | 5 / 12 | SER A 68LEU A 71ARG A 63VAL A 9CYH A 8 | 1.68A | 18.23 | None | ||
![]() | 3EIG_A_MTXA200_1 (DIHYDROFOLATEREDUCTASE) | Methotrexate | 5 / 12 | LEU A 62GLU A 18SER A 29PRO A 30TYR A 3 | 1.67A | 18.18 | None | ||
![]() | 3AG1_C_CHDC271_0 (CYTOCHROME C OXIDASEPOLYPEPTIDE 7A1CYTOCHROME C OXIDASESUBUNIT 3) | Cholic Acid | 4 / 6 | LEU A 62GLN A 61LEU A 41PHE A 39 | 1.54A | 15.6223.08 | None | ||
![]() | 2BXE_A_1FLA2003_1 (SERUM ALBUMIN) | Diflunisal | 5 / 9 | TYR A 3LEU A 16PHE A 39LEU A 62ALA A 49 | 1.77A | 10.07 | None | ||
![]() | 2ZIF_B_SAMB298_1 (PUTATIVEMODIFICATIONMETHYLASE) | S-Adenosylmethionine | 3 / 3 | ASP A 36THR A 56GLU A 18 | 1.23A | 15.68 | None | ||
![]() | 1RS6_A_MTLA870_0 (NITRIC-OXIDESYNTHASE, BRAIN) | Mannitol | 4 / 8 | SER A 29GLN A 61PHE A 48ASN A 28 | 1.69A | 12.67 | None | ||
![]() | 4Y8W_A_STRA604_1 (CYTOCHROME P45021-HYDROXYLASE) | Progesterone | 5 / 12 | SER A 45VAL A 67GLY A 11VAL A 14LEU A 62 | 1.52A | 10.46 | None | ||
![]() | 4ZZ8_A_GCSA208_1 (GLUCANASE/CHITOSANASE) | Glucosamine | 4 / 7 | GLU A 1TYR A 3GLU A 26ALA A 49 | 1.49A | 15.97 | None | ||
![]() | 2JT9_A_ACAA7_1 (5-MERIMMUNOSUPPRESSORYPEPTIDE FROMCYCLOLINOPEPTIDE XMODIFIED 16-MERIMMUNOSUPPRESSORYPEPTIDE FROMHOMEOTIC PROTEINANTENNAPEDIA) | Aminocaproic Acid | 4 / 5 | LEU A 16LEU A 15ARG A 63GLN A 6 | 1.57A | 17.6510.96 | None | ||
![]() | 1YAJ_G_BEZG3385_0 (CES1 PROTEIN) | Benzoic Acid | 3 / 3 | SER A 29VAL A 14LEU A 41 | 1.35A | 9.02 | None | ||
![]() | 1KQB_A_BEZA524_0 (OXYGEN-INSENSITIVENAD(P)HNITROREDUCTASE) | Benzoic Acid | 4 / 6 | THR A 59PHE A 48PHE A 39GLU A 26 | 1.47A | 16.43 | None | ||
![]() | 4K87_A_ADNA602_1 (PROLINE--TRNA LIGASE) | Adenosine | 4 / 8 | ARG A 63GLY A 11THR A 12THR A 44 | 1.37A | 11.46 | None | ||
![]() | 6FGC_A_ACTA813_0 (GEPHYRIN) | Acetic acid | 3 / 3 | THR A 13ALA A 40LYS A 38 | 1.62A | 12.53 | None | ||
![]() | 3OZV_B_ECNB411_1 (FLAVOHEMOGLOBIN) | Econazole | 5 / 9 | PHE A 39TYR A 25LEU A 62LEU A 16ALA A 40 | 1.56A | 12.39 | None | ||
![]() | 5INZ_D_DVAD15_0 (THETA DEFENSIN-2,D-PEPTIDETHETA DEFENSIN-2,L-PEPTIDE) | L-Valine | 3 / 3 | GLY A 11CYH A 8CYH A 43 | 1.05A | 11.49 | None | ||
![]() | 5BTA_H_MFXH101_1 (DNA GYRASE SUBUNIT ADNA GYRASE SUBUNIT BDNA SUBSTRATE 24-MERGGTCATGAATGACTATGCACGTAA) | Moxifloxacin | 4 / 6 | ARG A 57GLY A -2THR A 59GLU A 1 | 1.52A | 12.2115.16 | None | ||
![]() | 4XUM_B_IMNB501_1 (PEROXISOMEPROLIFERATOR-ACTIVATED RECEPTOR GAMMA) | Indomethacin | 5 / 11 | GLY A 55CYH A 52ARG A 57ALA A 49LEU A 2 | 1.67A | 15.58 | None | ||
![]() | 4BUP_A_SAMA500_0 (HISTONE-LYSINEN-METHYLTRANSFERASESUV420H1) | S-Adenosylmethionine | 5 / 12 | ALA A 40HIS A 58TYR A 60CYH A 52CYH A 20 | 1.58A | 14.76 | None | ||
![]() | 2FL5_F_RBFF204_1 (IMMUNOGLOBULIN IGG1LAMBDA LIGHT CHAINIMMUNOGLOBULIN IGG1HEAVY CHAIN) | Riboflavin | 4 / 8 | TYR A 60GLU A 18PHE A 50TYR A 25 | 1.68A | 18.1820.00 | None | ||
![]() | 1GTN_E_TRPE81_0 (TRP RNA-BINDINGATTENUATION PROTEIN) | L-Tryptophan | 4 / 6 | SER A 29GLY A 11THR A 46THR A 44 | 1.40A | 19.54 | None | ||
![]() | 6GTQ_B_ACTB207_0 (DUF1778DOMAIN-CONTAININGPROTEINN-ACETYLTRANSFERASE) | Acetic acid | 4 / 6 | LEU A 62THR A 44CYH A 8GLY A 11 | 1.41A | 18.0819.05 | None | ||
![]() | 1N4F_A_ASRA141_0 (LYSOZYME C) | Arsanilic acid | 4 / 6 | ASP A 54GLY A 55THR A 56PRO A -1 | 1.64A | 22.14 | None | ||
![]() | 5HPU_C_IPHC101_0 (INSULIN, CHAIN AINSULIN, CHAIN B) | Phenol | 4 / 6 | CYH A 8LEU A 62HIS A 4LEU A 16 | 1.59A | 14.9417.81 | None | ||
![]() | 1MAA_D_DMED999_1 (ACETYLCHOLINESTERASE) | Decamethonium | 4 / 8 | GLY A 27TYR A 25TYR A 60HIS A 47 | 1.56A | 8.69 | None | ||
![]() | 2IGT_A_SAMA1001_0 (SAM DEPENDENTMETHYLTRANSFERASE) | S-Adenosylmethionine | 5 / 12 | TYR A 3ALA A 51ALA A 49GLY A -2GLY A 55 | 1.50A | 14.60 | None | ||
![]() | 5B8I_C_FK5C201_1 (SERINE/THREONINE-PROTEIN PHOSPHATASEPEPTIDYL-PROLYLCIS-TRANS ISOMERASE) | Tacrolimus | 4 / 6 | LEU A 62SER A 29PRO A 30PHE A 31 | 1.50A | 12.70 | None | ||
![]() | 4CCQ_A_ACTA1317_0 (THIOREDOXINREDUCTASE) | Acetic acid | 3 / 3 | LEU A 62GLU A 7SER A 45 | 1.57A | 11.84 | None | ||
![]() | 5I73_A_68PA705_1 (SODIUM-DEPENDENTSEROTONINTRANSPORTER) | Citalopram | 5 / 9 | GLN A 80GLU A 76LEU A 71ILE A 73PHE A 72 | 1.46A | 9.26 | None | ||
![]() | 3PO7_A_ZONA601_1 (AMINE OXIDASE[FLAVIN-CONTAINING]B) | Zonisamide | 4 / 8 | TYR A 60LEU A 41PHE A 39TYR A 25 | 1.36A | 11.09 | None | ||
![]() | 1GTN_G_TRPG81_0 (TRP RNA-BINDINGATTENUATION PROTEIN) | L-Tryptophan | 4 / 7 | SER A 29GLY A 11THR A 46THR A 44 | 1.37A | 19.54 | None | ||
![]() | 5CPR_B_SAMB402_0 (HISTONE-LYSINEN-METHYLTRANSFERASESUV420H1) | S-Adenosylmethionine | 5 / 12 | ALA A 40HIS A 58TYR A 60CYH A 52CYH A 20 | 1.53A | 14.93 | None | ||
![]() | 4E3H_A_HQEA303_1 (CARBONIC ANHYDRASE 2) | Hydroquinone | 5 / 10 | LEU A 16LEU A 62THR A 44THR A 46VAL A 14 | 1.46A | 16.94 | None | ||
![]() | 1NX9_A_AICA5001_1 (ALPHA-AMINO ACIDESTER HYDROLASE) | Ampicillin | 4 / 8 | ARG A 63GLU A 77GLN A 79SER A 66 | 1.48A | 9.73 | None | ||
![]() | 1CMA_A_SAMA105_0 (PROTEIN (METREPRESSOR)) | S-Adenosylmethionine | 4 / 8 | PHE A 50ARG A 57GLU A 1HIS A 4 | 1.54A | 24.27 | None | ||
![]() | 4AWU_A_4CHA503_0 (OXIDOREDUCTASE,FMN-BINDING) | Parachlorophenol | 4 / 6 | SER A 29PHE A 31PHE A 39PHE A 48 | 1.62A | 11.83 | None | ||
![]() | 3C0Z_B_SHHB301_1 (HISTONE DEACETYLASE7A) | Vorinostat | 4 / 8 | HIS A 58PHE A 50ASP A 54GLY A 55 | 1.27A | 12.74 | None | ||
![]() | 6FGD_A_ACTA817_0 (GEPHYRIN) | Acetic acid | 3 / 3 | THR A 13ALA A 40LYS A 38 | 1.66A | 12.53 | None | ||
![]() | 2XZ5_D_ACHD1211_0 (SOLUBLEACETYLCHOLINERECEPTOR) | Acetylcholine | 4 / 8 | THR A 46GLN A 61TYR A 5CYH A 43 | 1.50A | 18.05 | None | ||
![]() | 4L3G_F_ACTF401_0 (METHYLAMINEDEHYDROGENASE HEAVYCHAIN) | Acetic acid | 3 / 3 | ARG A 63LEU A 82GLU A 81 | 1.78A | 13.28 | None | ||
![]() | 5WBV_A_SAMA402_0 (HISTONE-LYSINEN-METHYLTRANSFERASEKMT5B) | S-Adenosylmethionine | 5 / 12 | ALA A 40HIS A 58TYR A 60CYH A 52CYH A 20 | 1.51A | 14.65 | None | ||
![]() | 2V0M_C_KLNC1498_1 (CYTOCHROME P450 3A4) | Ketoconazole | 5 / 12 | SER A 29LEU A 16ALA A 49THR A 59ARG A 63 | 1.60A | 10.15 | None | ||
![]() | 2W8Y_A_486A1000_2 (PROGESTERONERECEPTOR) | Mifepristone | 4 / 7 | LEU A 62GLU A 77LEU A 82TYR A 60 | 1.70A | 13.03 | None | ||
![]() | 3RQ4_A_SAMA500_0 (HISTONE-LYSINEN-METHYLTRANSFERASESUV420H2) | S-Adenosylmethionine | 5 / 12 | GLU A 26GLY A 27HIS A 58CYH A 52CYH A 20 | 1.78A | 17.55 | None | ||
![]() | 1ZZU_A_MTLA870_0 (NITRIC-OXIDESYNTHASE, BRAIN) | Mannitol | 4 / 8 | SER A 29GLN A 61PHE A 48ASN A 28 | 1.66A | 12.20 | None |