POTENTIAL TARGETS FROM HUMAN (RESULTS FROM SUB-STRUCTURAL SIMILARITY SEARCHES)
1) User may click on the DrReposER ID (the second column) to get information on the binding sites and drug molecule.
2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).
3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera through AutoDock Vina.


DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
2p54 PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR ALPHA
(Homo
sapiens)
9 / 12PHE A 273
CYH A 276
SER A 280
ILE A 317
LEU A 321
LEU A 344
MET A 355
HIS A 440
TYR A 464
735  A 469 (-3.7A)
735  A 469 (-2.9A)
735  A 469 (-2.8A)
735  A 469 ( 4.8A)
735  A 469 ( 4.3A)
735  A 469 ( 4.2A)
735  A 469 (-2.9A)
735  A 469 (-4.0A)
735  A 469 (-4.6A)
0.51A61.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
2p8u HYDROXYMETHYLGLUTARY
L-COA SYNTHASE,
CYTOPLASMIC
(Homo
sapiens)
5 / 12PHE A 327
HIS A 264
LEU A 383
LEU A 255
MET A 278
None
SCY  A 129 ( 3.7A)
None
None
None
1.36A22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
2uw2 RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE M2
SUBUNIT
(Homo
sapiens)
5 / 12PHE A 244
SER A 258
HIS A 172
TYR A 176
LEU A 131
None
1.23A22.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3a77 INTERFERON
REGULATORY FACTOR 3
(Homo
sapiens)
5 / 12CYH A 371
LEU A 196
LEU A 281
PHE A 325
TYR A 408
None
1.45A20.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3b0q PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA
(Homo
sapiens)
9 / 12CYH A 285
SER A 289
ILE A 326
TYR A 327
LEU A 330
LEU A 353
MET A 364
HIS A 449
TYR A 473
MC5  A   1 (-3.6A)
MC5  A   1 (-2.6A)
MC5  A   1 ( 4.9A)
None
MC5  A   1 (-4.4A)
MC5  A   1 (-4.7A)
MC5  A   1 (-3.7A)
MC5  A   1 (-3.9A)
MC5  A   1 (-4.9A)
0.72A100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3b0q PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA
(Homo
sapiens)
5 / 12PHE A 282
CYH A 285
SER A 289
ILE A 326
TYR A 473
MC5  A   1 (-4.4A)
MC5  A   1 (-3.6A)
MC5  A   1 (-2.6A)
MC5  A   1 ( 4.9A)
MC5  A   1 (-4.9A)
0.85A100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3b0q PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA
(Homo
sapiens)
5 / 12SER A 289
ILE A 326
LEU A 330
PHE A 282
TYR A 473
MC5  A   1 (-2.6A)
MC5  A   1 ( 4.9A)
MC5  A   1 (-4.4A)
MC5  A   1 (-4.4A)
MC5  A   1 (-4.9A)
1.20A100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3d5f PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR DELTA
(Homo
sapiens)
7 / 12PHE A 282
CYH A 285
ILE A 326
LEU A 330
LEU A 353
HIS A 449
TYR A 473
L41  A 501 ( 4.9A)
L41  A 501 (-3.5A)
None
L41  A 501 (-4.9A)
None
L41  A 501 (-3.9A)
L41  A 501 (-4.8A)
0.61A62.92
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3dzu PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA
(Homo
sapiens)
7 / 12PHE D 282
CYH D 285
TYR D 327
LEU D 330
LEU D 353
MET D 364
HIS D 449
None
PLB  D 701 (-3.2A)
None
PLB  D 701 ( 4.1A)
None
PLB  D 701 ( 4.8A)
None
1.03A93.75
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3dzu PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA
(Homo
sapiens)
10 / 12PHE D 282
SER D 289
HIS D 323
ILE D 326
TYR D 327
LEU D 330
LEU D 353
MET D 364
HIS D 449
TYR D 473
None
PLB  D 701 ( 3.9A)
None
PLB  D 701 ( 4.5A)
None
PLB  D 701 ( 4.1A)
None
PLB  D 701 ( 4.8A)
None
None
0.86A93.75
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3dzu PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA
(Homo
sapiens)
6 / 12SER D 289
HIS D 323
ILE D 326
LEU D 330
PHE D 282
TYR D 473
PLB  D 701 ( 3.9A)
None
PLB  D 701 ( 4.5A)
PLB  D 701 ( 4.1A)
None
None
1.31A93.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3hf1 RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE
SUBUNIT M2 B
(Homo
sapiens)
5 / 12PHE A 206
SER A 220
HIS A 134
TYR A 138
LEU A  93
None
1.28A24.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3jd8 NIEMANN-PICK C1
PROTEIN
(Homo
sapiens)
5 / 12ILE A 437
TYR A 509
LEU A 440
LEU A 547
HIS A 510
None
1.29A11.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3ll8 SERINE/THREONINE-PRO
TEIN PHOSPHATASE 2B
CATALYTIC SUBUNIT
ALPHA ISOFORM
(Homo
sapiens)
5 / 12CYH A  88
SER A 307
HIS A  92
LEU A  98
LEU A 144
None
None
FE  A 506 ( 3.3A)
None
None
1.32A21.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3vpo RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE
SUBUNIT M2
(Homo
sapiens)
5 / 12PHE A 244
SER A 258
HIS A 172
TYR A 176
LEU A 131
None
1.19A23.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
4djn RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE
SUBUNIT M2 B
(Homo
sapiens)
5 / 12PHE A 206
SER A 220
HIS A 134
TYR A 138
LEU A  93
None
1.24A23.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
4gqb PROTEIN ARGININE
N-METHYLTRANSFERASE
5
(Homo
sapiens)
5 / 12SER A 199
ILE A 142
LEU A 138
LEU A 126
MET A 153
None
1.36A20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
4hl4 TBC1 DOMAIN FAMILY
MEMBER 20
(Homo
sapiens)
5 / 12HIS A 147
ILE A 130
TYR A 142
LEU A 134
MET A 178
None
1.47A24.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
4irq BETA-1,4-GALACTOSYLT
RANSFERASE 7
(Homo
sapiens)
5 / 12HIS A 184
ILE A 203
LEU A 258
HIS A 191
TYR A 199
None
None
None
None
TRS  A 403 (-4.9A)
1.33A19.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
4kf6 GLYCOLIPID TRANSFER
PROTEIN
DOMAIN-CONTAINING
PROTEIN 1
(Homo
sapiens)
5 / 12CYH A 138
SER A 141
HIS A 116
LEU A 122
LEU A  46
None
1.25A21.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
4ora SERINE/THREONINE-PRO
TEIN PHOSPHATASE 2B
CATALYTIC SUBUNIT
BETA ISOFORM
(Homo
sapiens)
5 / 12CYH A  97
SER A 316
HIS A 101
LEU A 107
LEU A 153
None
None
FE  A 602 (-3.9A)
None
None
1.19A19.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
4zzy POLY [ADP-RIBOSE]
POLYMERASE 2
(Homo
sapiens)
5 / 12CYH A 367
HIS A 361
ILE A 242
LEU A 241
LEU A 486
None
1.10A22.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
5dsy POLY [ADP-RIBOSE]
POLYMERASE 2
(Homo
sapiens)
5 / 12CYH A 354
HIS A 348
ILE A 229
LEU A 228
LEU A 473
None
1.14A25.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VN2_A_TLSA501_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
5hns NIEMANN-PICK C1
PROTEIN
(Homo
sapiens)
5 / 12ILE A 437
TYR A 509
LEU A 440
LEU A 547
HIS A 510
None
1.39A24.91