POTENTIAL TARGETS FROM HUMAN (RESULTS FROM SUB-STRUCTURAL SIMILARITY SEARCHES)
1) User may click on the DrReposER ID (the second column) to get information on the binding sites and drug molecule.
2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).
3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera through AutoDock Vina.


DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
2gjx BETA-HEXOSAMINIDASE
ALPHA CHAIN
(Homo
sapiens)
5 / 11LEU A 172
VAL A 192
PRO A 471
LEU A 473
PRO A 475
None
1.21A21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
2gk1 BETA-HEXOSAMINIDASE
SUBUNIT ALPHA
(Homo
sapiens)
5 / 11LEU I 172
VAL I 192
PRO I 471
LEU I 473
PRO I 475
None
1.22A22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
2o8e DNA MISMATCH REPAIR
PROTEIN MSH6
(Homo
sapiens)
5 / 11LEU B 887
LYS B 883
VAL B 878
PRO B 802
LEU B 798
None
1.20A20.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
2p82 CYSTEINE PROTEASE
ATG4A
(Homo
sapiens)
5 / 11LEU A  79
TYR A  57
PRO A 261
TRP A  75
PRO A 148
None
1.46A21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
2q6z UROPORPHYRINOGEN
DECARBOXYLASE
(Homo
sapiens)
5 / 11LEU A 181
PRO A 226
TRP A 159
LEU A 228
TYR A 182
None
1.45A20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
3un9 NLR FAMILY MEMBER X1
(Homo
sapiens)
5 / 11LEU A 770
LYS A 768
PRO A 790
LEU A 762
PRO A 764
None
1.25A21.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
4asi ACETYL-COA
CARBOXYLASE 1
(Homo
sapiens)
5 / 11VAL A2022
TYR A2118
PHE A1992
LEU A2015
PRO A2019
None
1.46A21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
4epu ANGIOPOIETIN-1
(Homo
sapiens)
5 / 11LEU A 373
PRO A 454
TRP A 448
LEU A 418
TYR A 389
None
1.40A14.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
4fdd TRANSPORTIN-1
(Homo
sapiens)
5 / 11LEU A 293
VAL A 389
TRP A 280
LEU A 283
PRO A 287
None
1.23A19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
4fm9 DNA TOPOISOMERASE
2-ALPHA
(Homo
sapiens)
5 / 11LEU A 730
LYS A 728
PRO A 716
LEU A 722
PRO A 724
None
1.38A22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
4mzv EPITHELIAL CELL
ADHESION MOLECULE
(Homo
sapiens)
5 / 11LEU A 166
LYS A 168
TYR A 186
TYR A 157
LEU A 233
None
None
None
None
DMU  A 301 ( 4.6A)
1.48A18.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
4r3i YTH
DOMAIN-CONTAINING
PROTEIN 1
(Homo
sapiens)
5 / 11LEU A 461
PRO A 493
PHE A 492
LEU A 491
PRO A 454
None
1.25A13.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
5b16 RIBONUCLEASE
3,DROSHA,RIBONUCLEAS
E
3,DROSHA,RIBONUCLEAS
E 3
(Homo
sapiens)
5 / 11LEU A1162
PHE A1252
LEU A1249
PRO A1247
TYR A1161
None
1.32A17.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
5i2c GATS-LIKE PROTEIN 3
(Homo
sapiens)
5 / 11VAL A  71
PHE A  60
LEU A  63
PRO A  65
TYR A  23
None
1.23A19.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
5mra SORCIN
(Homo
sapiens)
5 / 11LEU A 129
LYS A 127
VAL A 120
TYR A 148
PHE A 109
None
1.08A16.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
6fyo DUAL SPECIFICITY
PROTEIN KINASE CLK1
(Homo
sapiens)
5 / 11LEU A 458
VAL A 378
PRO A 435
PHE A 439
LEU A 436
None
1.39Aundetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KLM_A_SPPA999_1
(HIV-1 REVERSE
TRANSCRIPTASE)
6fyv DUAL SPECIFICITY
PROTEIN KINASE CLK4
(Homo
sapiens)
5 / 11LEU A 458
VAL A 378
PRO A 435
PHE A 439
LEU A 436
None
1.41Aundetectable