POTENTIAL TARGETS FROM HUMAN (RESULTS FROM SUB-STRUCTURAL SIMILARITY SEARCHES)
1) User may click on the DrReposER ID (the second column) to get information on the binding sites and drug molecule.
2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).
3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera through AutoDock Vina.


DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
1jy1 TYROSYL-DNA
PHOSPHODIESTERASE
(Homo
sapiens)
3 / 3LEU A 275
LEU A 270
SER A 198
None
0.56A14.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
1kwm PROCARBOXYPEPTIDASE
B
(Homo
sapiens)
3 / 3LEU A 108
LEU A  49
SER A  36
None
0.51A15.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
1us7 HSP90 CO-CHAPERONE
CDC37
(Homo
sapiens)
3 / 3LEU B 305
LEU B 301
SER B 300
None
0.68A19.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
1v5j KIAA1355 PROTEIN
(Homo
sapiens)
3 / 3LEU A  42
LEU A  80
SER A  92
None
0.67A24.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
1wgv KIAA1068 PROTEIN
(Homo
sapiens)
3 / 3LEU A  31
LEU A  97
SER A  83
None
0.65A20.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
1ya5 TELETHONIN
(Homo
sapiens)
3 / 3LEU T  60
LEU T  30
SER T   4
None
0.57A19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
1zli CARBOXYPEPTIDASE B
(Homo
sapiens)
3 / 3LEU A 108
LEU A  49
SER A  36
None
0.68A16.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
2f8v TELETHONIN
(Homo
sapiens)
3 / 3LEU T  60
LEU T  30
SER T   4
None
0.56A19.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
2iuw ALKYLATED REPAIR
PROTEIN ALKB HOMOLOG
3
(Homo
sapiens)
3 / 3LEU A  92
LEU A 245
SER A 206
None
None
AKG  A 700 ( 4.1A)
0.61A18.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
2ylf PROTEIN SPIRE
HOMOLOG 1
(Homo
sapiens)
3 / 3LEU A 156
LEU A 153
SER A 150
None
0.64A22.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
3bg9 PYRUVATE
CARBOXYLASE,
MITOCHONDRIAL
(Homo
sapiens)
3 / 3LEU A1037
LEU A1033
SER A1032
None
0.65A10.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
3f8u TAPASIN
(Homo
sapiens)
3 / 3LEU B 115
LEU B 142
SER B 161
None
None
NAG  B1233 ( 4.6A)
0.44A14.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
3mud DNA REPAIR PROTEIN
XRCC4,TROPOMYOSIN
ALPHA-1 CHAIN
(Gallus
gallus;
Homo
sapiens)
3 / 3LEU A  36
LEU A  20
SER A   6
None
0.61A24.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
3nxp PRETHROMBIN-1
(Homo
sapiens)
3 / 3LEU A 505
LEU A 453
SER A 445
None
0.64A14.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
3r7g PROTEIN SPIRE
HOMOLOG 1
(Homo
sapiens)
3 / 3LEU A 156
LEU A 153
SER A 150
None
0.64A22.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
3zkj ANKYRIN REPEAT AND
SOCS BOX PROTEIN 9
(Homo
sapiens)
3 / 3LEU A 217
LEU A 214
SER A 211
None
None
CL  A1297 (-3.5A)
0.68A17.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLM_A_MILA128_1
(TRANSTHYRETIN)
4cak INTEGRIN ALPHA-IIB
(Homo
sapiens)
3 / 3LEU A 567
LEU A 460
SER A 728
None
0.59A8.65