POTENTIAL TARGETS FROM HUMAN (RESULTS FROM SUB-STRUCTURAL SIMILARITY SEARCHES)
1) User may click on the DrReposER ID (the second column) to get information on the binding sites and drug molecule.
2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).
3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera through AutoDock Vina.


DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_A_GM4A301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
1suv TRANSFERRIN RECEPTOR
PROTEIN 1
(Homo
sapiens)
5 / 11VAL A 404
ALA A 451
TRP A 453
TYR A 470
LEU A 474
None
1.30A16.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_A_GM4A301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
2cbz MULTIDRUG
RESISTANCE-ASSOCIATE
D PROTEIN 1
(Homo
sapiens)
5 / 11VAL A 740
MET A 816
TYR A 789
LEU A 817
ALA A 779
None
1.49A22.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6DK1_A_GM4A301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
5hk2 SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1
(Homo
sapiens)
9 / 11VAL A  84
ALA A  86
TRP A  89
MET A  93
TYR A 103
LEU A 105
TRP A 164
GLU A 172
ALA A 185
61V  A 301 (-4.5A)
None
None
61V  A 301 (-3.4A)
61V  A 301 ( 4.3A)
None
None
61V  A 301 (-2.9A)
61V  A 301 ( 4.2A)
0.74A100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6DK1_A_GM4A301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
5hk2 SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1
(Homo
sapiens)
10 / 11VAL A  84
ALA A  86
TRP A  89
MET A  93
TYR A 103
LEU A 105
TYR A 120
ASP A 126
TRP A 164
GLU A 172
61V  A 301 (-4.5A)
None
None
61V  A 301 (-3.4A)
61V  A 301 ( 4.3A)
None
None
61V  A 301 (-3.2A)
None
61V  A 301 (-2.9A)
0.64A100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6DK1_A_GM4A301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
5hk2 SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1
(Homo
sapiens)
5 / 11VAL A  84
LEU A 105
ASP A 126
GLU A 172
ALA A  86
61V  A 301 (-4.5A)
None
61V  A 301 (-3.2A)
61V  A 301 (-2.9A)
None
1.49A100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_B_GM4B301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
1ivh ISOVALERYL-COA
DEHYDROGENASE
(Homo
sapiens)
5 / 11VAL A  80
ALA A 259
LEU A  13
ASP A   7
LEU A 256
None
1.44A19.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_B_GM4B301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
1suv TRANSFERRIN RECEPTOR
PROTEIN 1
(Homo
sapiens)
5 / 11VAL A 404
ALA A 451
TRP A 453
TYR A 470
LEU A 474
None
1.31A16.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_B_GM4B301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
3n0t DIPEPTIDYL PEPTIDASE
2
(Homo
sapiens)
5 / 11VAL A 189
ALA A 191
LEU A 404
ALA A 193
LEU A 395
None
1.45A19.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_B_GM4B301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
4u9v N-ALPHA-ACETYLTRANSF
ERASE 40
(Homo
sapiens)
5 / 11VAL B 140
ALA B 120
LEU B 190
TYR B  48
LEU B 109
ACO  B 301 (-4.2A)
None
None
None
None
1.04A20.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6DK1_B_GM4B301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
5hk2 SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1
(Homo
sapiens)
11 / 11VAL A  84
ALA A  86
TRP A  89
TYR A 103
LEU A 105
TYR A 120
ASP A 126
TRP A 164
GLU A 172
ALA A 185
LEU A 186
61V  A 301 (-4.5A)
None
None
61V  A 301 ( 4.3A)
None
None
61V  A 301 (-3.2A)
None
61V  A 301 (-2.9A)
61V  A 301 ( 4.2A)
None
0.54A100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_C_GM4C301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
1suv TRANSFERRIN RECEPTOR
PROTEIN 1
(Homo
sapiens)
5 / 11VAL A 404
ALA A 451
TRP A 453
TYR A 470
LEU A 474
None
1.28A16.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_C_GM4C301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
5b39 KILLER CELL
IMMUNOGLOBULIN-LIKE
RECEPTOR 3DL1
(Homo
sapiens)
5 / 11VAL G  92
ALA G  16
LEU G  39
THR G  25
ALA G  12
None
1.41A20.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DK1_C_GM4C301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
5edu MALTOSE-BINDING
PERIPLASMIC PROTEIN,
HISTONE DEACETYLASE
6 CHIMERA
(Escherichia
coli;
Homo
sapiens)
5 / 11ALA B 582
TYR B 570
GLU B 502
THR B 575
ALA B 579
None
1.19A16.95
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6DK1_C_GM4C301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
5hk2 SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1
(Homo
sapiens)
11 / 11VAL A  84
ALA A  86
TRP A  89
TYR A 103
LEU A 105
TYR A 120
ASP A 126
TRP A 164
GLU A 172
THR A 181
ALA A 185
61V  A 301 (-4.5A)
None
None
61V  A 301 ( 4.3A)
None
None
61V  A 301 (-3.2A)
None
61V  A 301 (-2.9A)
61V  A 301 ( 4.7A)
61V  A 301 ( 4.2A)
0.70A100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
6DK1_C_GM4C301_0
(SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1)
5hk2 SIGMA NON-OPIOID
INTRACELLULAR
RECEPTOR 1
(Homo
sapiens)
5 / 11VAL A  84
LEU A 105
ASP A 126
GLU A 172
ALA A  86
61V  A 301 (-4.5A)
None
61V  A 301 (-3.2A)
61V  A 301 (-2.9A)
None
1.44A100.00