POTENTIAL TARGETS FROM HUMAN (RESULTS FROM SUB-STRUCTURAL SIMILARITY SEARCHES)
1) User may click on the DrReposER ID (the second column) to get information on the binding sites and drug molecule.
2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).
3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera through AutoDock Vina.


DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
1apy ASPARTYLGLUCOSAMINID
ASE
(Homo
sapiens)
4 / 5LEU B 240
ILE B 267
ILE B 239
GLY B 235
None
0.86A15.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
1htr GASTRICSIN
(Homo
sapiens)
4 / 5LEU B  30
ASP B  32
ILE B 120
GLY B 219
None
0.67A26.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
1jqe HISTAMINE
N-METHYLTRANSFERASE
(Homo
sapiens)
4 / 5LEU A  71
ASP A  67
ILE A  54
ILE A  70
None
0.97A19.52
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
2ewy BETA-SECRETASE 2
(Homo
sapiens)
4 / 5LEU A  46
ASP A  48
ILE A 134
GLY A 243
None
DBO  A1001 (-2.7A)
None
DBO  A1001 (-4.2A)
0.31A52.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
3v4p INTEGRIN ALPHA-4
(Homo
sapiens)
4 / 5LEU A 342
ILE A 367
ILE A 345
GLY A 403
None
0.95A23.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
4lxl LYSINE-SPECIFIC
DEMETHYLASE 4B
(Homo
sapiens)
4 / 5ASP A  64
ILE A 137
ILE A  63
GLY A  96
None
0.86A20.51
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
4rcd BETA-SECRETASE 1
(Homo
sapiens)
5 / 5LEU A  30
ASP A  32
ILE A 110
ILE A 118
GLY A 230
3LL  A 501 (-4.2A)
3LL  A 501 (-2.8A)
None
3LL  A 501 (-4.6A)
3LL  A 501 (-3.0A)
0.12A99.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
5ebb ACID
SPHINGOMYELINASE-LIK
E PHOSPHODIESTERASE
3A
(Homo
sapiens)
4 / 5ASP A 153
ILE A 136
ILE A 129
GLY A 109
None
0.91A24.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
5hdt SISTER CHROMATID
COHESION PROTEIN
PDS5 HOMOLOG B
(Homo
sapiens)
4 / 5LEU A 621
ILE A 613
ILE A 622
GLY A 649
None
0.93A15.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BUF_A_AEGA394_0
(BETA-SECRETASE 1)
6ej2 BETA-SECRETASE 1
(Homo
sapiens)
5 / 5LEU A 439
ASP A 441
ILE A 519
ILE A 527
GLY A 639
B7E  A 901 (-4.6A)
B7E  A 901 (-2.9A)
None
B7E  A 901 (-4.4A)
B7E  A 901 (-3.8A)
0.39Aundetectable