POTENTIAL TARGETS FROM HUMAN (RESULTS FROM SUB-STRUCTURAL SIMILARITY SEARCHES)
1) User may click on the DrReposER ID (the second column) to get information on the binding sites and drug molecule.
2) Click View (the second last column) to view matched residues and superposition in the NGL viewer (upper right part).
3) User may also click on the Dock (the last column) to get script for molecular docking in UCSF Chimera through AutoDock Vina.


DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1elv COMPLEMENT C1S
COMPONENT
(Homo
sapiens)
6 / 8ASP A 611
SER A 612
SER A 617
VAL A 638
GLY A 641
GLY A 648
None
None
SO4  A2001 ( 2.7A)
None
None
None
0.37A24.93
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1fq3 GRANZYME B
(Homo
sapiens)
4 / 8SER A 190
SER A 195
VAL A 213
GLY A 216
None
SO4  A 800 (-2.4A)
None
None
0.70A32.41
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1fxy COAGULATION FACTOR
XA-TRYPSIN CHIMERA
(Homo
sapiens)
6 / 8ASP A 189
SER A 190
SER A 195
VAL A 213
GLY A 216
GLY A 226
0G6  A   1 (-2.8A)
0G6  A   1 (-2.8A)
0G6  A   1 (-1.4A)
None
0G6  A   1 (-3.9A)
0G6  A   1 (-3.3A)
0.32A34.80
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1gvl KALLIKREIN 6
(Homo
sapiens)
4 / 8SER A 195
VAL A 213
GLY A 216
GLY A 226
None
0.63A38.13
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1h4w TRYPSIN IVA
(Homo
sapiens)
6 / 8ASP A 189
SER A 190
SER A 195
VAL A 213
GLY A 216
GLY A 226
BEN  A 250 (-2.9A)
BEN  A 250 (-2.9A)
BEN  A 250 (-3.6A)
None
BEN  A 250 (-3.9A)
BEN  A 250 (-3.3A)
0.27A38.80
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1o5f SERINE PROTEASE
HEPSIN
(Homo
sapiens)
6 / 8ASP H 189
GLN H 192
SER H 195
VAL H 213
GLY H 216
GLY H 226
CR9  H 256 (-2.4A)
CR9  H 256 ( 4.4A)
CR9  H 256 (-1.5A)
CR9  H 256 (-4.3A)
CR9  H 256 ( 3.8A)
CR9  H 256 (-3.0A)
0.44A37.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1orf GRANZYME A
(Homo
sapiens)
5 / 8ASP A 189
SER A 190
SER A 195
GLY A 216
GLY A 226
0G6  A   1 (-2.9A)
0G6  A   1 (-2.9A)
0G6  A   1 (-1.3A)
0G6  A   1 (-3.3A)
0G6  A   1 (-3.5A)
0.40A29.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1q3x MANNAN-BINDING
LECTIN SERINE
PROTEASE 2
(Homo
sapiens)
6 / 8ASP A 627
SER A 628
SER A 633
VAL A 653
GLY A 656
GLY A 667
NA  A 800 ( 4.6A)
GOL  A 701 (-3.4A)
GOL  A 701 (-3.0A)
GOL  A 701 (-4.9A)
GOL  A 701 ( 4.1A)
GOL  A 701 ( 4.0A)
0.38A26.75
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
1zlr COAGULATION FACTOR
XI
(Homo
sapiens)
4 / 8ASP A 189
SER A 195
GLY A 216
GLY A 226
368  A 901 (-2.8A)
368  A 901 (-1.4A)
368  A 901 (-3.6A)
368  A 901 (-3.5A)
0.39A34.77
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2ei8 COAGULATION FACTOR
X, HEAVY CHAIN
(Homo
sapiens)
6 / 8ASP A 189
GLN A 192
SER A 195
VAL A 213
GLY A 216
GLY A 226
DT8  A 700 (-3.5A)
DT8  A 700 (-3.9A)
DT8  A 700 ( 3.9A)
DT8  A 700 ( 4.1A)
DT8  A 700 (-3.5A)
DT8  A 700 (-3.5A)
0.47A32.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2ik8 GUANINE
NUCLEOTIDE-BINDING
PROTEIN G(I),
ALPHA-1 SUBUNIT
(Homo
sapiens)
4 / 8SER A  44
SER A  47
GLY A 203
GLY A  40
GDP  A 401 (-3.6A)
MG  A 356 ( 1.9A)
ALF  A 355 (-3.3A)
None
0.76A20.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2oq5 TRANSMEMBRANE
PROTEASE, SERINE 11E
(Homo
sapiens)
5 / 8ASP A 189
SER A 195
VAL A 213
GLY A 216
GLY A 226
BEN  A 245 (-3.0A)
BEN  A 245 (-3.3A)
None
BEN  A 245 ( 3.8A)
BEN  A 245 (-3.4A)
0.30A35.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2pks THROMBIN HEAVY CHAIN
FRAGMENT
(Homo
sapiens)
5 / 8ASP C 229
SER C 235
VAL C 255
GLY C 258
GLY C 268
G44  C 101 (-2.6A)
G44  C 101 (-3.5A)
None
G44  C 101 (-3.3A)
G44  C 101 (-3.0A)
0.47A19.76
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2psy KALLIKREIN-5
(Homo
sapiens)
6 / 8ASP A 189
SER A 190
SER A 195
VAL A 213
GLY A 216
GLY A 226
None
0.43A35.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2q3f RAS-RELATED
GTP-BINDING PROTEIN
D
(Homo
sapiens)
4 / 8SER A  54
SER A  57
GLY A 101
GLY A  50
GNP  A 401 (-3.5A)
MG  A 301 ( 2.1A)
GNP  A 401 (-3.2A)
None
0.75A19.77
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2qy0 COMPLEMENT C1R
SUBCOMPONENT
(Homo
sapiens)
6 / 8ASP B 631
GLN B 634
SER B 637
VAL B 657
GLY B 660
GLY B 668
None
0.60A30.83
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2r0l HEPATOCYTE GROWTH
FACTOR ACTIVATOR
(Homo
sapiens)
5 / 8ASP A 189
GLN A 192
SER A 195
GLY A 216
GLY A 226
None
0.51A38.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2r2w PLASMINOGEN
ACTIVATOR, UROKINASE
(Homo
sapiens)
5 / 8ASP U 189
SER U 190
VAL U 213
GLY U 216
GLY U 226
4PG  U 300 (-2.8A)
4PG  U 300 (-2.7A)
None
4PG  U 300 (-3.3A)
4PG  U 300 (-3.2A)
0.31A100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2r2w PLASMINOGEN
ACTIVATOR, UROKINASE
(Homo
sapiens)
4 / 8SER U 190
SER U 195
VAL U 213
GLY U 216
4PG  U 300 (-2.7A)
4PG  U 300 (-3.5A)
None
4PG  U 300 (-3.3A)
0.77A100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2wpm COAGULATION FACTOR
IXA HEAVY CHAIN
(Homo
sapiens)
5 / 8ASP S 189
SER S 190
SER S 195
GLY S 216
GLY S 226
None
0.30A30.56
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
2zec TRYPTASE BETA 2
(Homo
sapiens)
7 / 8ASP A 203
SER A 204
GLN A 206
SER A 209
VAL A 227
GLY A 230
GLY A 240
11N  A   1 (-2.6A)
11N  A   1 (-3.5A)
None
11N  A   1 (-3.3A)
None
11N  A   1 (-3.9A)
11N  A   1 (-3.6A)
0.36A35.66
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
3f6u VITAMIN K-DEPENDENT
PROTEIN C HEAVY
CHAIN
(Homo
sapiens)
5 / 8ASP H 189
SER H 195
VAL H 213
GLY H 216
GLY H 226
0G6  H   1 (-2.8A)
0G6  H   1 (-1.8A)
None
0G6  H   1 (-3.8A)
0G6  H   1 ( 3.9A)
0.48A35.82
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
3gov MASP-1
(Homo
sapiens)
5 / 8ASP B 640
SER B 646
VAL B 666
GLY B 669
GLY B 679
None
0.64A30.45
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
3gym PROSTASIN
(Homo
sapiens)
5 / 8ASP A 189
SER A 195
VAL A 213
GLY A 216
GLY A 226
None
0.48A36.46
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
3r3g THROMBIN HEAVY CHAIN
(Homo
sapiens)
5 / 8ASP B 189
SER B 195
VAL B 213
GLY B 216
GLY B 226
None
0.45A31.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
3w6o DYNAMIN-1-LIKE
PROTEIN
(Homo
sapiens)
4 / 8SER A  36
SER A  39
GLY A 149
GLY A  32
GCP  A 801 (-4.0A)
MG  A 802 ( 2.0A)
GCP  A 801 (-3.6A)
None
0.79A21.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
3zjc GTPASE IMAP FAMILY
MEMBER 7
(Homo
sapiens)
4 / 8SER A  19
SER A  22
GLY A  66
GLY A  15
GNP  A1297 (-3.9A)
MG  A1296 ( 2.4A)
GNP  A1297 ( 4.3A)
None
0.69A21.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
4ci8 ECHINODERM
MICROTUBULE-ASSOCIAT
ED PROTEIN-LIKE 1
(Homo
sapiens)
5 / 8ASP A 647
SER A 645
GLN A 588
GLY A 606
GLY A 625
None
1.39A17.16
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
4d9r COMPLEMENT FACTOR D
(Homo
sapiens)
5 / 8ASP A 189
SER A 190
SER A 195
VAL A 213
GLY A 226
None
0.63A32.08
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
4dgj ENTEROPEPTIDASE
CATALYTIC LIGHT
CHAIN
(Homo
sapiens)
4 / 8ASP A 181
SER A 182
GLY A 208
GLY A 218
None
0.29A34.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
4fxg MANNAN-BINDING
LECTIN SERINE
PROTEASE 2 B CHAIN
(Homo
sapiens)
5 / 8ASP H 627
SER H 628
VAL H 653
GLY H 656
GLY H 667
None
0.41A31.20
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
4iw4 MANNAN-BINDING
LECTIN SERINE
PROTEASE 3
(Homo
sapiens)
5 / 8ASP E 639
SER E 645
VAL E 665
GLY E 668
GLY E 680
None
0.39A30.28
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2VIN_A_505A1247_1
(UROKINASE-TYPE
PLASMINOGEN
ACTIVATOR CHAIN B)
4k8y KALLIKREIN-4
(Homo
sapiens)
6 / 8ASP A 189
SER A 190
SER A 195
VAL A 213
GLY A 216
GLY A 226
None
0.38A33.85