Results: Ligand

Ligand ID: GEO

Drugbank ID:
Gemcitabine
(DB00441)

Indication:
Gemcitabine is a nucleoside metabolic inhibitor used as adjunct therapy in the treatment of certain types of ovarian cancer, non-small cell lung carcinoma, metastatic breast cancer, and as a single agent for pancreatic cancer.

LIST OF BINDING INTERFACES for query 'DB00441'
(Click on the 'Details' column to view details on interfaces and similar patterns of amino acids)
Click on the 'View' column to view patterns on the structural viewer)

DrReposER ID	PDB	Ligand	Drug	Organism	Macromolecule	Pfam	Res.	Interface	HETATM	View	Details
2NO0_A_GEOA302	2no0	GEO	Gemcitabine (DB00441)	Homo sapiens	DEOXYCYTIDINE KINASE	dNK	16	ILE A 30 GLU A 53 VAL A 55 TRP A 58 LEU A 82 MET A 85 TYR A 86 PHE A 96 GLN A 97 ALA A 100 ARG A 104 ARG A 128 ASP A 133 PHE A 137 ARG A 194 GLU A 197	GEO A 302
2VPP_A_GEOA1210	2vpp	GEO	Gemcitabine (DB00441)	Drosophila melanogaster	DEOXYNUCLEOSIDE KINASE	NA	15	ILE A 29 GLU A 52 VAL A 54 TRP A 57 LEU A 66 MET A 69 TYR A 70 PHE A 80 GLN A 81 VAL A 84 ARG A 105 ALA A 110 PHE A 114 MET A 118 GLU A 172	GEO A1210
4PD5_A_GEOA501	4pd5	GEO	Gemcitabine (DB00441)	Vibrio cholerae serotype o1	NUPC FAMILY PROTEIN	Gate Nucleos_tra2_C Nucleos_tra2_N	14	GLY A 153 GLN A 154 GLU A 156 ALA A 185 VAL A 188 TYR A 192 LEU A 259 ASN A 331 GLU A 332 PHE A 333 PHE A 366 ASN A 368 SER A 371 ILE A 374	GEO A 501
6NL4_A_GEOA302	6nl4	GEO	Gemcitabine (DB00441)	Mycobacterium tuberculosis (strain atcc 25618 / h37rv)	ATP-DEPENDENT DETHIOBIOTIN SYNTHETASE BIOD	AAA_26	13	GLY A 12 VAL A 13 GLY A 14 VAL A 17 GLU A 52 GLY A 169 SER A 170 LEU A 196 PRO A 197 ALA A 198 GLY A 199 ALA A 200 ALA A 201	GEO A 302
DrReposER ID	PDB	Ligand	Drug	Organism	Macromolecule	Pfam	Res.	Interface	HETATM	View	Details

[["2NO0_A_GEOA302","2no0","GEO","Gemcitabine (DB00441)","Homo sapiens","DEOXYCYTIDINE KINASE","dNK",16,"ILE A  30;GLU A  53;VAL A  55;TRP A  58;LEU A  82;MET A  85;TYR A  86;PHE A  96;GLN A  97;ALA A 100;ARG A 104;ARG A 128;ASP A 133;PHE A 137;ARG A 194;GLU A 197","GEO A 302\r"],["2VPP_A_GEOA1210","2vpp","GEO","Gemcitabine (DB00441)","Drosophila melanogaster","DEOXYNUCLEOSIDE KINASE","NA",15,"ILE A  29;GLU A  52;VAL A  54;TRP A  57;LEU A  66;MET A  69;TYR A  70;PHE A  80;GLN A  81;VAL A  84;ARG A 105;ALA A 110;PHE A 114;MET A 118;GLU A 172","GEO A1210\r"],["4PD5_A_GEOA501","4pd5","GEO","Gemcitabine (DB00441)","Vibrio cholerae serotype o1","NUPC FAMILY PROTEIN","Gate;Nucleos_tra2_C;Nucleos_tra2_N",14,"GLY A 153;GLN A 154;GLU A 156;ALA A 185;VAL A 188;TYR A 192;LEU A 259;ASN A 331;GLU A 332;PHE A 333;PHE A 366;ASN A 368;SER A 371;ILE A 374","GEO A 501\r"],["6NL4_A_GEOA302","6nl4","GEO","Gemcitabine (DB00441)","Mycobacterium tuberculosis (strain atcc 25618 \/ h37rv)","ATP-DEPENDENT DETHIOBIOTIN SYNTHETASE BIOD","AAA_26",13,"GLY A  12;VAL A  13;GLY A  14;VAL A  17;GLU A  52;GLY A 169;SER A 170;LEU A 196;PRO A 197;ALA A 198;GLY A 199;ALA A 200;ALA A 201","GEO A 302\r"]]