PDB ID: 1tbf

Macromolecule:
CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE

Source Organism:
Homo sapiens

Pfam Annotation:
PDEase_I

Ligand ID:
VIA

Drugbank ID:
Sildenafil (DB00203)

HETATM residue:
VIA A 501

No. of binding residues:16

Fragment sites:
1TBF_A_VIAA501_0 (10 residues)
1TBF_A_VIAA501_1 (6 residues)


Click the tab to get the list of similar binding patterns of amino acids


List of all similar binding patterns of amino acids (All fragments)
Note that only 3-12 residue patterns can be used for ASSAM searches, thus the binding sites are divided into fragments.
Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the 'View' column to view superposed patterns of amino acids - Superposition on full binding site)
(Click the 'Script' button to download a python script for molecular docking in UCSF Chimera)

HitMacromolecule/
Organism
PfamRes.Residue MatchesHETATM Residue/sRMSDDali Z-scoreSeq. Identity (%)ViewDock
5jo3CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I10TYR B 612 - TYR A 612
HIS B 613 - HIS A 613
ALA B 779 - ALA A 779
VAL B 782 - VAL A 782
ALA B 783 - ALA A 783
PHE B 786 - PHE A 786
LEU B 804 - LEU A 804
ILE B 813 - ILE A 813
MET B 816 - MET A 816
GLN B 817 - GLN A 817
None
ZN  B 901 ( 4.9A)
6LK  B 903 (-3.7A)
6LK  B 903 ( 4.9A)
None
None
6LK  B 903 (-4.0A)
None
6LK  B 903 (-4.0A)
6LK  B 903 (-3.3A)
0.51A54.399.69
1tbfCGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I9TYR A 612 - TYR A 612
HIS A 613 - HIS A 613
ALA A 779 - ALA A 779
VAL A 782 - VAL A 782
ALA A 783 - ALA A 783
PHE A 786 - PHE A 786
LEU A 804 - LEU A 804
ILE A 813 - ILE A 813
GLN A 817 - GLN A 817
None
None
VIA  A 501 (-4.6A)
VIA  A 501 ( 4.6A)
VIA  A 501 ( 3.9A)
VIA  A 501 (-4.9A)
VIA  A 501 (-4.4A)
VIA  A 501 ( 4.6A)
VIA  A 501 (-3.0A)
0.04A57.9100.00
7jsnROD CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE SUBUNIT BETA
(Bos taurus)
GAF
PDEase_I
7TYR B 556 - TYR A 612
HIS B 557 - HIS A 613
ALA B 733 - ALA A 779
VAL B 736 - VAL A 782
ALA B 737 - ALA A 783
PHE B 740 - PHE A 786
GLN B 771 - GLN A 817
None
None
None
VDN  B 904 ( 4.8A)
VDN  B 904 ( 4.1A)
None
VDN  B 904 ( 3.0A)
0.50A38.420.05
1tbfCGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I7TYR A 612 - TYR A 612
HIS A 613 - HIS A 613
VAL A 782 - VAL A 782
PHE A 786 - PHE A 786
LEU A 804 - LEU A 804
MET A 816 - MET A 816
GLN A 817 - GLN A 817
None
None
VIA  A 501 ( 4.6A)
VIA  A 501 (-4.9A)
VIA  A 501 (-4.4A)
VIA  A 501 ( 4.3A)
VIA  A 501 (-3.0A)
0.61A57.9100.00
5u00CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I6TYR A 655 - TYR A 612
HIS A 656 - HIS A 613
ALA A 823 - ALA A 779
PHE A 830 - PHE A 786
ILE A 855 - ILE A 813
GLN A 859 - GLN A 817
None
7OV  A1001 (-4.0A)
None
7OV  A1001 (-4.3A)
None
7OV  A1001 (-3.1A)
0.40A44.336.09
6cycCGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I6TYR A 655 - TYR A 612
HIS A 656 - HIS A 613
ALA A 823 - ALA A 779
PHE A 830 - PHE A 786
ILE A 855 - ILE A 813
GLN A 859 - GLN A 817
FKJ  A1003 (-4.7A)
FKJ  A1003 (-4.6A)
None
EDO  A1005 ( 3.8A)
None
FKJ  A1003 (-3.0A)
0.47A43.435.19
7jsnROD CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE SUBUNIT ALPHA
(Bos taurus)
GAF
PDEase_I
6TYR A 558 - TYR A 612
HIS A 559 - HIS A 613
ALA A 735 - ALA A 779
VAL A 738 - VAL A 782
ALA A 739 - ALA A 783
PHE A 742 - PHE A 786
None
None
None
None
VDN  A 904 ( 3.9A)
None
0.51A23.120.00
1zklHIGH-AFFINITY CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 7A
(Homo sapiens)
PDEase_I6TYR A 211 - TYR A 612
HIS A 212 - HIS A 613
VAL A 380 - VAL A 782
PHE A 384 - PHE A 786
ILE A 409 - ILE A 813
GLN A 413 - GLN A 817
IBM  A 503 (-4.6A)
None
IBM  A 503 (-4.7A)
IBM  A 503 (-4.5A)
None
IBM  A 503 (-3.0A)
0.51A38.529.52
2r8qCLASS I PHOSPHODIESTERASE PDEB1
(Leishmania major)
PDEase_I6TYR A 680 - TYR A 612
HIS A 681 - HIS A 613
ALA A 850 - ALA A 779
VAL A 853 - VAL A 782
PHE A 857 - PHE A 786
GLN A 887 - GLN A 817
IBM  A   3 ( 4.7A)
IBM  A   3 ( 4.8A)
None
IBM  A   3 ( 4.8A)
IBM  A   3 (-4.9A)
IBM  A   3 (-3.3A)
0.51A40.831.69
6fe3PHOSPHODIESTERASE
(Trypanosoma brucei)
PDEase_I6TYR A 668 - TYR A 612
HIS A 669 - HIS A 613
ALA A 837 - ALA A 779
VAL A 840 - VAL A 782
PHE A 844 - PHE A 786
GLN A 874 - GLN A 817
None
None
D68  A1003 (-4.0A)
D68  A1003 (-4.9A)
D68  A1003 (-4.9A)
D68  A1003 (-3.2A)
0.63A39.931.65
5h2qPHOSPHODIESTERASE
(Trypanosoma brucei brucei)
PDEase_I5TYR A 668 - TYR A 612
HIS A 669 - HIS A 613
ALA A 838 - ALA A 779
VAL A 841 - VAL A 782
PHE A 845 - PHE A 786
LLI  A1003 ( 4.9A)
None
LLI  A1003 ( 4.3A)
LLI  A1003 (-4.6A)
LLI  A1003 (-4.6A)
0.36A40.933.71
3ecmHIGH AFFINITY CAMP-SPECIFIC AND IBMX-INSENSITIVE 3',5'-CYCLIC PHOSPHODIESTERASE 8A
(Homo sapiens)
PDEase_I5TYR A 555 - TYR A 612
HIS A 556 - HIS A 613
ALA A 741 - ALA A 779
ILE A 774 - ILE A 813
GLN A 778 - GLN A 817
None
0.43A38.427.30
5h2qPHOSPHODIESTERASE
(Trypanosoma brucei brucei)
PDEase_I5TYR A 668 - TYR A 612
HIS A 669 - HIS A 613
ALA A 838 - ALA A 779
VAL A 841 - VAL A 782
GLN A 875 - GLN A 817
LLI  A1003 ( 4.9A)
None
LLI  A1003 ( 4.3A)
LLI  A1003 (-4.6A)
LLI  A1003 (-3.1A)
0.54A40.933.71
7jsnROD CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE SUBUNIT ALPHA
(Bos taurus)
GAF
PDEase_I
5HIS A 559 - HIS A 613
ALA A 735 - ALA A 779
VAL A 738 - VAL A 782
ALA A 739 - ALA A 783
GLN A 773 - GLN A 817
None
None
None
VDN  A 904 ( 3.9A)
VDN  A 904 ( 3.3A)
0.59A23.120.00
3so6LDL RECEPTOR ADAPTOR PROTEIN
(Rattus norvegicus;
synthetic construct
)
PID5ALA A 163 - ALA A 779
VAL A 166 - VAL A 782
ALA A 167 - ALA A 783
PHE A 170 - PHE A 786
ILE A 112 - ILE A 813
None
0.62ANA20.06
1zklHIGH-AFFINITY CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 7A
(Homo sapiens)
PDEase_I5HIS A 212 - HIS A 613
VAL A 380 - VAL A 782
PHE A 384 - PHE A 786
LEU A 401 - LEU A 804
GLN A 413 - GLN A 817
None
IBM  A 503 (-4.7A)
IBM  A 503 (-4.5A)
None
IBM  A 503 (-3.0A)
0.73A38.529.52
2dfaHYPOTHETICAL UPF0271 PROTEIN TTHB195
(Thermus thermophilus)
LamB_YcsF5ALA A 229 - ALA A 779
VAL A 232 - VAL A 782
ALA A 233 - ALA A 783
LEU A 5 - LEU A 804
ILE A 24 - ILE A 813
None
0.94ANA20.22
4uejGALACTITOL-1-PHOSPHATE 5-DEHYDROGENASE
(Escherichia coli)
ADH_N
ADH_zinc_N
5ALA A 250 - ALA A 779
VAL A 247 - VAL A 782
ALA A 246 - ALA A 783
LEU A 258 - LEU A 804
ILE A 233 - ILE A 813
None
0.95ANA22.04
5oesGLUTATHIONE SYNTHETASE
(Solanum tuberosum)
GSH_synth_ATP
GSH_synthase
5ALA A 77 - ALA A 779
VAL A 80 - VAL A 782
ALA A 81 - ALA A 783
PHE A 84 - PHE A 786
LEU A 154 - LEU A 804
None
1.01ANA21.50
5oesGLUTATHIONE SYNTHETASE
(Solanum tuberosum)
GSH_synth_ATP
GSH_synthase
5VAL A 80 - VAL A 782
ALA A 81 - ALA A 783
PHE A 84 - PHE A 786
LEU A 154 - LEU A 804
ILE A 437 - ILE A 813
None
1.05ANA21.50
4ft4DNA (CYTOSINE-5)-METHYLTRANSFERASE 1
(Zea mays;
synthetic construct
)
BAH
Chromo
DNA_methylase
5TYR B 597 - TYR A 612
ALA B 854 - ALA A 779
VAL B 857 - VAL A 782
ALA B 858 - ALA A 783
LEU B 557 - LEU A 804
None
1.18ANA18.17
3k11PUTATIVE GLYCOSYL HYDROLASE
(Bacteroides thetaiotaomicron vpi-5482)
Glyco_hydro_885TYR A 83 - TYR A 612
VAL A 137 - VAL A 782
ALA A 138 - ALA A 783
PHE A 141 - PHE A 786
ILE A 158 - ILE A 813
None
1.20ANA20.95
2ocdL-ASPARAGINASE I
(Vibrio cholerae)
Asparaginase
Asparaginase_C
5VAL A 205 - VAL A 782
PHE A 105 - PHE A 786
LEU A 101 - LEU A 804
ILE A 208 - ILE A 813
GLN A 69 - GLN A 817
None
1.22ANA21.28
4i9fGLYCEROL 3-PHOSPHATE PHOSPHATASE
(Mycobacterium tuberculosis)
GNAT_like
Hydrolase_6
Hydrolase_like
5TYR A 240 - TYR A 612
ALA A 306 - ALA A 779
VAL A 239 - VAL A 782
ALA A 238 - ALA A 783
ILE A 250 - ILE A 813
None
1.23ANA20.37
6sfwATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX
(Listeria monocytogenes)
AAA_2
ClpB_D2-small
zf-C4_ClpX
5TYR O 93 - TYR A 612
ALA O 88 - ALA A 779
VAL O 89 - VAL A 782
ALA O 86 - ALA A 783
LEU O 71 - LEU A 804
None
1.25ANA23.52
6puxHOMOSERINE O-ACETYLTRANSFERASE
(Mycobacterium tuberculosis (strain atcc 25618 / h37rv))
Abhydrolase_15ALA A 97 - ALA A 779
VAL A 98 - VAL A 782
ALA A 99 - ALA A 783
LEU A 57 - LEU A 804
ILE A 66 - ILE A 813
None
1.25ANA22.03
3qan1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1
(Bacillus halodurans)
Aldedh5VAL A 422 - VAL A 782
ALA A 423 - ALA A 783
PHE A 424 - PHE A 786
LEU A 337 - LEU A 804
MET A 385 - MET A 816
None
1.26ANA20.30
3jxv70 KDA PEPTIDYL-PROLYL ISOMERASE
(Triticum aestivum)
FKBP_C5HIS A 207 - HIS A 613
ALA A 215 - ALA A 779
ALA A 211 - ALA A 783
LEU A 255 - LEU A 804
ILE A 159 - ILE A 813
None
1.31ANA20.32
4qawXYN30D
(Paenibacillus barcinonensis)
CBM_65TYR A 54 - TYR A 612
HIS A 23 - HIS A 613
ALA A 81 - ALA A 783
ILE A 133 - ILE A 813
MET A 170 - MET A 816
None
1.32ANA18.52
3ddjCBS DOMAIN-CONTAINING PROTEIN
(Sulfolobus solfataricus)
CBS5ALA A 196 - ALA A 779
VAL A 197 - VAL A 782
ALA A 194 - ALA A 783
PHE A 24 - PHE A 786
LEU A 51 - LEU A 804
None
1.42ANA24.10
3cwnTRANSALDOLASE B
(Escherichia coli)
TAL_FSA5TYR A 218 - TYR A 612
ALA A 170 - ALA A 779
ALA A 166 - ALA A 783
LEU A 158 - LEU A 804
ILE A 140 - ILE A 813
None
1.43ANA26.39
2e1dTRANSALDOLASE
(Mus musculus)
TAL_FSA5TYR A 229 - TYR A 612
ALA A 181 - ALA A 779
ALA A 177 - ALA A 783
LEU A 169 - LEU A 804
ILE A 150 - ILE A 813
None
1.46ANA23.12
1tbfCGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I6LEU A 725 - LEU A 725
LEU A 765 - LEU A 765
ALA A 767 - ALA A 767
ILE A 768 - ILE A 768
PHE A 820 - PHE A 820
ILE A 824 - ILE A 824
None
VIA  A 501 ( 4.8A)
VIA  A 501 ( 4.0A)
None
VIA  A 501 (-3.7A)
None
0.00A57.9100.00
5jo3CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I6LEU B 725 - LEU A 725
LEU B 765 - LEU A 765
ALA B 767 - ALA A 767
ILE B 768 - ILE A 768
PHE B 820 - PHE A 820
ILE B 824 - ILE A 824
None
6LK  B 903 (-4.5A)
6LK  B 903 (-3.5A)
6LK  B 903 (-4.2A)
6LK  B 903 (-3.4A)
None
0.56A54.399.69
3ksmABC-TYPE SUGAR TRANSPORT SYSTEM, PERIPLASMIC COMPONENT
(Hahella chejuensis)
Peripla_BP_45LEU A 264 - LEU A 725
ALA A 243 - ALA A 767
ILE A 244 - ILE A 768
PHE A 255 - PHE A 820
ILE A 273 - ILE A 824
None
0.82ANA22.93
1bu8PROTEIN (PANCREATIC LIPASE RELATED PROTEIN 2)
(Rattus norvegicus)
Lipase
PLAT
5LEU A 131 - LEU A 765
ALA A 129 - ALA A 767
ILE A 128 - ILE A 768
PHE A 72 - PHE A 820
ILE A 102 - ILE A 824
None
0.87ANA21.70
6ac8MYCOBACTERIUM SMEGMATIS MFD
(Mycobacterium smegmatis mc2 155)
CarD_CdnL_TRCF
DEAD
Helicase_C
TRCF
UvrB_inter
5LEU A 481 - LEU A 725
LEU A 16 - LEU A 765
ALA A 14 - ALA A 767
ILE A 13 - ILE A 768
ILE A 483 - ILE A 824
None
None
SO4  A1306 (-4.5A)
None
None
0.94ANA14.85
3kv0HET-C2
(Podospora anserina)
GLTP5LEU A 107 - LEU A 725
LEU A 197 - LEU A 765
ILE A 193 - ILE A 768
PHE A 41 - PHE A 820
ILE A 88 - ILE A 824
None
MLY  A 198 ( 4.3A)
MLY  A 192 ( 4.3A)
None
None
0.94ANA23.85
3sxxPEROXISOMAL PRIMARY AMINE OXIDASE
(Pichia angusta)
Cu_amine_oxid
Cu_amine_oxidN2
Cu_amine_oxidN3
5LEU A 643 - LEU A 765
ALA A 418 - ALA A 767
ILE A 419 - ILE A 768
PHE A 293 - PHE A 820
ILE A 464 - ILE A 824
None
0.94ANA18.30
4xaiMALTOSE-BINDING PERIPLASMIC PROTEIN,TAILLESS ORTHOLOG
(Escherichia coli o157:h7;
tribolium castaneum;
synthetic construct
)
SBP_bac_15LEU A1292 - LEU A 725
LEU A1300 - LEU A 765
ALA A1302 - ALA A 767
ILE A1303 - ILE A 768
ILE A1358 - ILE A 824
None
0.96ANA22.98
4udqGLUCOSE-METHANOL-CHOLINE OXIDOREDUCTASE
(Methylovorus sp. mp688)
GMC_oxred_C
GMC_oxred_N
5LEU A 458 - LEU A 725
LEU A 410 - LEU A 765
ILE A 413 - ILE A 768
PHE A 368 - PHE A 820
ILE A 310 - ILE A 824
None
1.01ANA20.59
1hc7PROLYL-TRNA SYNTHETASE
(Thermus thermophilus)
HGTP_anticodon
ProRS-C_1
tRNA-synt_2b
5LEU A 285 - LEU A 725
LEU A 185 - LEU A 765
ALA A 183 - ALA A 767
PHE A 265 - PHE A 820
ILE A 50 - ILE A 824
None
1.04ANA21.15
3hjvMALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE
(Vibrio cholerae)
Acyl_transf_15LEU A 118 - LEU A 725
ALA A 251 - ALA A 767
ILE A 248 - ILE A 768
PHE A 226 - PHE A 820
ILE A 110 - ILE A 824
None
1.09ANA20.33
3nrgTETR FAMILY TRANSCRIPTIONAL REGULATOR
(Chloroflexus aurantiacus)
TetR_N5LEU A 174 - LEU A 765
ALA A 179 - ALA A 767
ILE A 175 - ILE A 768
PHE A 102 - PHE A 820
ILE A 98 - ILE A 824
None
1.09ANA20.00
2okcTYPE I RESTRICTION ENZYME STYSJI M PROTEIN
(Bacteroides thetaiotaomicron vpi-5482)
HsdM_N
N6_Mtase
5LEU A 330 - LEU A 725
LEU A 425 - LEU A 765
ILE A 427 - ILE A 768
PHE A 364 - PHE A 820
ILE A 333 - ILE A 824
None
1.11ANA22.15
4b63L-ORNITHINE N5 MONOOXYGENASE
(Aspergillus fumigatus)
K_oxygenase5LEU A 31 - LEU A 725
ALA A 53 - ALA A 767
ILE A 54 - ILE A 768
PHE A 81 - PHE A 820
ILE A 79 - ILE A 824
None
1.12ANA22.71
4cj0ENDOGLUCANASE D
(Clostridium thermocellum;
synthetic construct
)
CelD_N
Dockerin_1
Glyco_hydro_9
5LEU A 487 - LEU A 765
ALA A 489 - ALA A 767
ILE A 490 - ILE A 768
PHE A 571 - PHE A 820
ILE A 62 - ILE A 824
None
1.12ANA20.09
3si2GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE
(Mus musculus)
Peptidase_M285LEU A 321 - LEU A 725
LEU A 272 - LEU A 765
ALA A 274 - ALA A 767
ILE A 275 - ILE A 768
ILE A 352 - ILE A 824
None
1.22ANA22.16
3nyiFAT ACID-BINDING PROTEIN
(Eubacterium ventriosum)
DegV5LEU A 152 - LEU A 725
LEU A 131 - LEU A 765
ILE A 132 - ILE A 768
PHE A 87 - PHE A 820
ILE A 119 - ILE A 824
None
1.22ANA22.47
3lykSTRINGENT STARVATION PROTEIN A HOMOLOG
(Haemophilus influenzae)
GST_C5LEU A 165 - LEU A 725
LEU A 136 - LEU A 765
ILE A 139 - ILE A 768
PHE A 143 - PHE A 820
ILE A 183 - ILE A 824
None
1.23ANA20.23
3b8aHEXOKINASE-1
(Saccharomyces cerevisiae)
Hexokinase_1
Hexokinase_2
5LEU X 56 - LEU A 725
ALA X 402 - ALA A 767
ILE X 403 - ILE A 768
PHE X 240 - PHE A 820
ILE X 266 - ILE A 824
None
1.27ANA22.13
4nhoPROBABLE ATP-DEPENDENT RNA HELICASE DDX23
(Homo sapiens)
DEAD
Helicase_C
5LEU A 680 - LEU A 725
LEU A 655 - LEU A 765
ALA A 657 - ALA A 767
ILE A 658 - ILE A 768
ILE A 669 - ILE A 824
None
1.28ANA20.83
1nkgRHAMNOGALACTURONASE B
(Aspergillus aculeatus)
CBM-like
RhgB_N
fn3_3
5LEU A 55 - LEU A 725
LEU A 78 - LEU A 765
ALA A 99 - ALA A 767
ILE A 97 - ILE A 768
ILE A 51 - ILE A 824
None
1.29ANA18.81
3rp8FLAVOPROTEIN MONOOXYGENASE
(Klebsiella pneumoniae)
FAD_binding_35LEU A 207 - LEU A 725
LEU A 252 - LEU A 765
ALA A 254 - ALA A 767
ILE A 253 - ILE A 768
PHE A 219 - PHE A 820
None
1.30ANA25.12
3w0lGLUCOKINASE REGULATORY PROTEIN
(Xenopus laevis)
NA5LEU B 406 - LEU A 725
LEU B 315 - LEU A 765
ALA B 313 - ALA A 767
ILE B 312 - ILE A 768
ILE B 435 - ILE A 824
None
1.35ANA22.12
2bw3TRANSPOSASE
(Musca domestica)
DBD_Tnp_Hermes
Dimer_Tnp_hAT
5LEU A 257 - LEU A 725
LEU A 228 - LEU A 765
ALA A 230 - ALA A 767
ILE A 231 - ILE A 768
ILE A 179 - ILE A 824
None
1.37ANA21.64
2zf8COMPONENT OF SODIUM-DRIVEN POLAR FLAGELLAR MOTOR
(Vibrio alginolyticus)
MotY_N
OmpA
5LEU A 173 - LEU A 725
LEU A 181 - LEU A 765
ALA A 185 - ALA A 767
ILE A 184 - ILE A 768
ILE A 163 - ILE A 824
None
1.37ANA22.13
5i92GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE
(Pseudomonas aeruginosa)
Aminotran_35LEU A 64 - LEU A 765
ALA A 406 - ALA A 767
ILE A 405 - ILE A 768
PHE A 320 - PHE A 820
ILE A 315 - ILE A 824
None
1.38ANA21.65
1fnnCELL DIVISION CONTROL PROTEIN 6
(Pyrobaculum aerophilum)
AAA_22
Cdc6_C
5LEU A 282 - LEU A 725
LEU A 293 - LEU A 765
ALA A 295 - ALA A 767
ILE A 296 - ILE A 768
ILE A 346 - ILE A 824
None
1.38ANA21.14
2vz8FATTY ACID SYNTHASE
(Sus scrofa)
ADH_zinc_N
Acyl_transf_1
KAsynt_C_assoc
KR
Ketoacyl-synt_C
Methyltransf_12
PP-binding
PS-DH
Thioesterase
ketoacyl-synt
5LEU A 404 - LEU A 725
LEU A 341 - LEU A 765
ALA A 339 - ALA A 767
ILE A 342 - ILE A 768
ILE A 6 - ILE A 824
None
1.41ANA8.50
1nu4U1A RNA BINDING DOMAIN
(Homo sapiens)
RRM_15LEU A 17 - LEU A 725
LEU A 30 - LEU A 765
ALA A 32 - ALA A 767
ILE A 33 - ILE A 768
ILE A 14 - ILE A 824
None
1.41ANA13.51
4pkdU1 SMALL NUCLEAR RIBONUCLEOPROTEIN A,U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA
(Sus scrofa;
homo sapiens;
synthetic construct
)
RRM_15LEU B 17 - LEU A 725
LEU B 30 - LEU A 765
ALA B 32 - ALA A 767
ILE B 33 - ILE A 768
ILE B 14 - ILE A 824
None
1.43ANA18.72
3w6jSCPA
(Geobacillus stearothermophilus)
NA5LEU A 21 - LEU A 725
LEU A 69 - LEU A 765
ALA A 71 - ALA A 767
ILE A 72 - ILE A 768
ILE A 40 - ILE A 824
None
1.44ANA20.06
5u00CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I4LEU A 770 - LEU A 725
LEU A 809 - LEU A 765
PHE A 862 - PHE A 820
ILE A 866 - ILE A 824
None
7OV  A1001 ( 4.6A)
7OV  A1001 (-3.9A)
None
0.35A44.336.09
2dlyFYN-RELATED KINASE
(Mus musculus)
SH24LEU A 106 - LEU A 725
LEU A 56 - LEU A 765
ILE A 69 - ILE A 768
PHE A 91 - PHE A 820
None
0.44ANA15.03
3i3wPHOSPHOGLUCOSAMINE MUTASE
(Francisella tularensis subsp. tularensis)
PGM_PMM_I
PGM_PMM_II
PGM_PMM_III
PGM_PMM_IV
4LEU A 27 - LEU A 725
LEU A 112 - LEU A 765
PHE A 5 - PHE A 820
ILE A 10 - ILE A 824
None
0.45ANA20.40
3hc7GENE 12 PROTEIN
(Mycobacterium phage d29)
Cutinase4LEU A 204 - LEU A 725
ALA A 221 - ALA A 767
ILE A 222 - ILE A 768
ILE A 186 - ILE A 824
None
0.46ANA20.72
3dzdTRANSCRIPTIONAL REGULATOR (NTRC FAMILY)
(Aquifex aeolicus)
Response_reg
Sigma54_activat
4LEU A 21 - LEU A 765
ILE A 20 - ILE A 768
PHE A 109 - PHE A 820
ILE A 113 - ILE A 824
None
0.49ANA22.83
2v4uCTP SYNTHASE 2
(Homo sapiens)
GATase4LEU A 382 - LEU A 765
ALA A 384 - ALA A 767
ILE A 385 - ILE A 768
ILE A 407 - ILE A 824
None
0.49ANA25.41
1co6PROTEIN (CYTOCHROME C2)
(Blastochloris viridis)
Cytochrom_C4LEU A 93 - LEU A 765
ILE A 94 - ILE A 768
PHE A 63 - PHE A 820
ILE A 67 - ILE A 824
None
None
HEC  A 108 (-4.7A)
None
0.51ANA14.38
1wquPROTO-ONCOGENE TYROSINE-PROTEIN KINASE FES/FPS
(Homo sapiens)
SH24LEU A 103 - LEU A 725
LEU A 51 - LEU A 765
ILE A 64 - ILE A 768
ILE A 85 - ILE A 824
None
0.53ANA17.42
4pkdU1 SMALL NUCLEAR RIBONUCLEOPROTEIN A,U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA
(Sus scrofa;
homo sapiens;
synthetic construct
)
RRM_14LEU B 30 - LEU A 765
ALA B 32 - ALA A 767
ILE B 33 - ILE A 768
PHE B 77 - PHE A 820
None
0.54ANA18.72
4eo92,3-BISPHOSPHOGLYCERATE-DEPENDENT PHOSPHOGLYCERATE MUTASE
(Mycobacterium leprae)
His_Phos_14LEU A 192 - LEU A 725
LEU A 9 - LEU A 765
ALA A 7 - ALA A 767
ILE A 182 - ILE A 824
None
0.56ANA21.75
5v4sTRANSPORTER, CATION CHANNEL FAMILY / CYCLIC NUCLEOTIDE-BINDING DOMAIN MULTI-DOMAIN PROTEIN
(Leptospira licerasiae serovar varillal str. var 010)
Ion_trans
cNMP_binding
4LEU A 133 - LEU A 725
LEU A 151 - LEU A 765
ALA A 153 - ALA A 767
ILE A 129 - ILE A 824
None
0.56ANA24.95
4qhjUNCHARACTERIZED PROTEIN MJ1213
(Methanocaldococcus jannaschii)
Peptidase_M564LEU A 7 - LEU A 725
LEU A 55 - LEU A 765
ILE A 54 - ILE A 768
ILE A 63 - ILE A 824
None
0.56ANA16.52
5cuwSRTE1
(Streptomyces coelicolor (strain atcc baa-471 / a3(2) / m145))
Sortase4LEU A 317 - LEU A 725
LEU A 200 - LEU A 765
ALA A 198 - ALA A 767
ILE A 271 - ILE A 824
None
0.57ANA20.54
3qioGAG-POL POLYPROTEIN,RIBONUCLEASE HI,GAG-POL POLYPROTEIN
(Human immunodeficiency virus type 1 group m subtype b;
escherichia coli (strain k12);
human immunodeficiency virus type 1 group m subtype b (isolate hxb2)
)
RNase_H4LEU A 479 - LEU A 765
ALA A 481 - ALA A 767
ILE A 482 - ILE A 768
ILE A 505 - ILE A 824
None
0.57ANA17.38
4v2xENDO-BETA-1,4-GLUCANASE (CELLULASE B)
(Bacillus halodurans)
CBM46
CBM_X2
Cellulase
4LEU A 425 - LEU A 765
ALA A 427 - ALA A 767
ILE A 428 - ILE A 768
ILE A 373 - ILE A 824
None
0.58ANA23.57
1sa3TYPE II RESTRICTION ENZYME MSPI
(Moraxella sp.;
synthetic construct
)
Endonuc-MspI4LEU A 48 - LEU A 725
LEU A 67 - LEU A 765
ALA A 69 - ALA A 767
ILE A 77 - ILE A 824
None
0.58ANA23.08
3ighUNCHARACTERIZED METAL-DEPENDENT HYDROLASE
(Pyrococcus horikoshii)
Amidohydro_34LEU X 138 - LEU A 765
ALA X 140 - ALA A 767
ILE X 141 - ILE A 768
ILE X 147 - ILE A 824
None
0.58ANA22.04
4pv4PROLINE AMINOPEPTIDASE P II
(Yersinia pestis)
AMP_N
Peptidase_M24
4LEU A 323 - LEU A 725
LEU A 385 - LEU A 765
ILE A 402 - ILE A 768
ILE A 290 - ILE A 824
None
0.58ANA22.66
3cblPROTO-ONCOGENE TYROSINE-PROTEIN KINASE FES/FPS
(Homo sapiens;
synthetic construct
)
PK_Tyr_Ser-Thr
SH2
4LEU A 545 - LEU A 725
LEU A 493 - LEU A 765
ILE A 506 - ILE A 768
ILE A 527 - ILE A 824
None
0.58ANA20.81
1ag9FLAVODOXIN
(Escherichia coli)
Flavodoxin_14LEU A 52 - LEU A 725
LEU A 73 - LEU A 765
PHE A 78 - PHE A 820
ILE A 109 - ILE A 824
None
0.59ANA20.56
5h5xPUTATIVE OXIDOREDUCTASE
(Streptomyces coelicolor (strain atcc baa-471 / a3(2) / m145))
adh_short_C24LEU A 140 - LEU A 765
ALA A 142 - ALA A 767
ILE A 143 - ILE A 768
ILE A 195 - ILE A 824
None
0.60ANA19.06
1ci9PROTEIN (CARBOXYLESTERASE)
(Burkholderia gladioli)
Beta-lactamase4LEU A 302 - LEU A 725
LEU A 96 - LEU A 765
ALA A 98 - ALA A 767
ILE A 121 - ILE A 768
None
0.60ANA20.09
1otkPHENYLACETIC ACID DEGRADATION PROTEIN PAAC
(Escherichia coli)
NA4LEU A 5 - LEU A 725
LEU A 120 - LEU A 765
ALA A 122 - ALA A 767
ILE A 123 - ILE A 768
None
0.60ANA20.79
2v3zXAA-PRO AMINOPEPTIDASE
(Escherichia coli;
synthetic construct
)
AMP_N
Peptidase_M24
4LEU A 325 - LEU A 725
LEU A 386 - LEU A 765
ILE A 403 - ILE A 768
ILE A 292 - ILE A 824
None
0.60ANA21.51
3wqbEXTRACELLULAR SERINE PROTEASE
(Aeromonas sobria)
P_proprotein
Peptidase_S8
4LEU A 365 - LEU A 725
ALA A 136 - ALA A 767
ILE A 135 - ILE A 768
ILE A 417 - ILE A 824
None
0.60ANA21.49
3hazPROLINE DEHYDROGENASE
(Bradyrhizobium japonicum usda 110)
Aldedh
Pro_dh
Pro_dh-DNA_bdg
4LEU A 904 - LEU A 765
ALA A 906 - ALA A 767
ILE A 907 - ILE A 768
ILE A 929 - ILE A 824
None
0.60ANA15.77
5kazSH2 DOMAIN-CONTAINING PROTEIN 1B
(Homo sapiens)
SH24LEU A 97 - LEU A 725
LEU A 42 - LEU A 765
ILE A 55 - ILE A 768
ILE A 83 - ILE A 824
None
0.61ANA15.00
4g1qREVERSE TRANSCRIPTASE/RIBONUCLEASE H
(Human immunodeficiency virus type 1)
RVT_1
RVT_connect
RVT_thumb
4LEU A 479 - LEU A 765
ALA A 481 - ALA A 767
ILE A 482 - ILE A 768
ILE A 505 - ILE A 824
None
0.61ANA20.64
3eo8BLUB-LIKE FLAVOPROTEIN
(Clostridium difficile 630)
Nitroreductase4LEU A 150 - LEU A 765
ALA A 152 - ALA A 767
ILE A 153 - ILE A 768
ILE A 7 - ILE A 824
None
0.61ANA19.54
3ddsGLYCOGEN PHOSPHORYLASE, LIVER FORM
(Homo sapiens)
Phosphorylase4LEU A 765 - LEU A 725
LEU A 581 - LEU A 765
ILE A 584 - ILE A 768
ILE A 742 - ILE A 824
None
0.61ANA17.65
4c91ALPHA-GLUCURONIDASE GH115
(Bacteroides ovatus)
GH115_C
Glyco_hydro_115
4LEU A 46 - LEU A 725
LEU A 160 - LEU A 765
ILE A 157 - ILE A 768
ILE A 96 - ILE A 824
None
0.61ANA15.99
2erfTHROMBOSPONDIN-1
(Homo sapiens)
NA4LEU A 130 - LEU A 725
LEU A 149 - LEU A 765
ALA A 147 - ALA A 767
ILE A 138 - ILE A 824
None
0.61ANA19.65
2mcaUNCHARACTERIZED PROTEIN
(Eubacterium rectale)
DUF53004LEU A 13 - LEU A 765
ILE A 45 - ILE A 768
PHE A 47 - PHE A 820
ILE A 11 - ILE A 824
None
0.62ANA14.74
5nnyWIPB
(Legionella pneumophila)
NA4LEU A 137 - LEU A 725
LEU A 44 - LEU A 765
ILE A 43 - ILE A 768
ILE A 113 - ILE A 824
None
0.62ANA23.20
3nvnPLEXIN-C1
(Ectromelia virus;
homo sapiens
)
PSI4LEU B 429 - LEU A 725
LEU B 399 - LEU A 765
ILE B 416 - ILE A 768
ILE B 439 - ILE A 824
None
0.62ANA20.95
3m6iL-ARABINITOL 4-DEHYDROGENASE
(Neurospora crassa)
ADH_N
ADH_zinc_N
4LEU A 330 - LEU A 725
LEU A 197 - LEU A 765
ALA A 199 - ALA A 767
ILE A 223 - ILE A 824
None
0.62ANA20.66
2vifSUPPRESSOR OF CYTOKINE SIGNALLING 6
(Homo sapiens)
SH24LEU A 487 - LEU A 725
LEU A 420 - LEU A 765
ILE A 433 - ILE A 768
ILE A 458 - ILE A 824
None
0.62ANA17.01
5z2cALPHA-PROTEIN KINASE 1
(Homo sapiens)
NA4LEU A 239 - LEU A 725
LEU A 444 - LEU A 765
ILE A 445 - ILE A 768
ILE A 221 - ILE A 824
None
0.62ANA21.78
5tibSUGAR ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN,GASDERMIN-B
(Escherichia coli;
homo sapiens
)
Gasdermin_C4LEU A1279 - LEU A 725
LEU A1399 - LEU A 765
ILE A1398 - ILE A 768
PHE A1332 - PHE A 820
None
0.62ANA22.05
3pi7NADH OXIDOREDUCTASE
(Mesorhizobium loti)
ADH_N
ADH_zinc_N
4LEU A 150 - LEU A 765
ALA A 152 - ALA A 767
ILE A 153 - ILE A 768
ILE A 304 - ILE A 824
None
0.62ANA21.39
1gntHYBRID CLUSTER PROTEIN
(Desulfovibrio vulgaris)
Prismane4LEU A 183 - LEU A 725
LEU A 66 - LEU A 765
ALA A 68 - ALA A 767
ILE A 152 - ILE A 824
None
0.63ANA23.05
3sp1CYSTEINYL-TRNA SYNTHETASE
(Borrelia burgdorferi)
tRNA-synt_1e4LEU A 5 - LEU A 725
LEU A 49 - LEU A 765
ILE A 50 - ILE A 768
ILE A 235 - ILE A 824
None
0.63ANA23.31
2wzpLACTOCOCCAL PHAGE P2 ORF16
(Lactococcus phage p2;
lama glama
)
Caudo_bapla164ALA R 176 - ALA A 767
ILE R 179 - ILE A 768
PHE R 157 - PHE A 820
ILE R 156 - ILE A 824
None
0.63ANA22.14
4zcfRESTRICTION ENDONUCLEASE ECOP15I, RESTRICTION SUBUNIT
(Escherichia coli;
synthetic construct
)
RE_endonuc
ResIII
4LEU C 132 - LEU A 725
LEU C 144 - LEU A 765
ILE C 181 - ILE A 768
PHE C 99 - PHE A 820
None
0.64ANA16.29
3bgePREDICTED ATPASE
(Haemophilus influenzae)
MgsA_C4LEU A 294 - LEU A 765
ALA A 296 - ALA A 767
ILE A 297 - ILE A 768
ILE A 336 - ILE A 824
None
0.64ANA19.03
1f5nINTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 1
(Homo sapiens)
GBP
GBP_C
4LEU A 13 - LEU A 725
LEU A 31 - LEU A 765
ALA A 33 - ALA A 767
ILE A 34 - ILE A 768
None
0.64ANA20.10
1nc7HYPOTHETICAL PROTEIN TM1070
(Thermotoga maritima)
ASRT4LEU A 68 - LEU A 765
ILE A 73 - ILE A 768
PHE A 44 - PHE A 820
ILE A 81 - ILE A 824
None
0.64ANA20.55
3qokPUTATIVE CHITINASE II
(Klebsiella pneumoniae subsp. pneumoniae)
Glyco_hydro_184LEU A 84 - LEU A 725
LEU A 109 - LEU A 765
ILE A 148 - ILE A 768
ILE A 139 - ILE A 824
None
0.64ANA23.97
1nu4U1A RNA BINDING DOMAIN
(Homo sapiens)
RRM_14LEU A 30 - LEU A 765
ALA A 32 - ALA A 767
ILE A 33 - ILE A 768
PHE A 77 - PHE A 820
None
0.64ANA13.51
5kvkPROTEIN KP700603
(Klebsiella pneumoniae 700603)
CinA4LEU A 162 - LEU A 725
LEU A 23 - LEU A 765
ALA A 25 - ALA A 767
ILE A 104 - ILE A 824
None
0.64ANA18.05
3dxqCHOLINE/ETHANOLAMINE KINASE FAMILY PROTEIN
(Mesorhizobium loti)
Choline_kinase4LEU A 23 - LEU A 725
LEU A 10 - LEU A 765
ALA A 12 - ALA A 767
ILE A 13 - ILE A 768
None
0.64ANA21.28
4hkuTETR TRANSCRIPTIONAL REGULATOR
(Listeria monocytogenes)
TetR_C_27
TetR_N
4LEU A 125 - LEU A 765
ALA A 123 - ALA A 767
PHE A 68 - PHE A 820
ILE A 67 - ILE A 824
None
0.64ANA20.83
3ktsGLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN
(Listeria monocytogenes str. 4b)
NA4LEU A 41 - LEU A 725
LEU A 57 - LEU A 765
ILE A 84 - ILE A 768
ILE A 79 - ILE A 824
None
0.64ANA21.33
5imaBACTERIOFERRITIN COMIGRATORY PROTEIN
(Xanthomonas campestris pv. campestris (strain atcc 33913 / dsm 3586 / ncppb 528 / lmg 568 / p 25))
AhpC-TSA4LEU A 101 - LEU A 725
LEU A 27 - LEU A 765
ALA A 29 - ALA A 767
ILE A 37 - ILE A 824
None
0.65ANA18.52
2afwGLUTAMINYL-PEPTIDE CYCLOTRANSFERASE
(Homo sapiens)
Peptidase_M284LEU A 318 - LEU A 725
LEU A 271 - LEU A 765
ALA A 273 - ALA A 767
ILE A 274 - ILE A 768
None
0.65ANA22.49
4g6cBETA-HEXOSAMINIDASE 1
(Burkholderia cenocepacia)
Glyco_hydro_34LEU A 197 - LEU A 765
ALA A 195 - ALA A 767
ILE A 196 - ILE A 768
ILE A 239 - ILE A 824
None
0.65ANA23.44
3pihUVRABC SYSTEM PROTEIN A
(Thermotoga maritima;
synthetic construct
)
ABC_tran
UvrA_DNA-bind
UvrA_inter
4LEU A 635 - LEU A 725
LEU A 590 - LEU A 765
ALA A 588 - ALA A 767
ILE A 652 - ILE A 824
None
0.65ANA16.68
5ew8FIBROBLAST GROWTH FACTOR RECEPTOR 1
(Homo sapiens)
PK_Tyr_Ser-Thr4LEU A 465 - LEU A 725
LEU A 525 - LEU A 765
ALA A 520 - ALA A 767
ILE A 529 - ILE A 824
None
0.65ANA20.16
2qq8TBC1 DOMAIN FAMILY MEMBER 14
(Homo sapiens)
RabGAP-TBC4LEU A 504 - LEU A 765
ILE A 503 - ILE A 768
PHE A 465 - PHE A 820
ILE A 464 - ILE A 824
None
0.65ANA26.35
1xknPUTATIVE PEPTIDYL-ARGININE DEIMINASE
(Chlorobium tepidum)
PAD_porph4LEU A 155 - LEU A 725
LEU A 193 - LEU A 765
ILE A 199 - ILE A 768
ILE A 160 - ILE A 824
None
0.65ANA22.60
2d4aMALATE DEHYDROGENASE
(Aeropyrum pernix)
Ldh_1_C
Ldh_1_N
4LEU B 18 - LEU A 725
ALA B 235 - ALA A 767
ILE B 236 - ILE A 768
ILE B 2 - ILE A 824
None
0.65ANA22.07
4k5sOXYGENASE
(Streptomyces argillaceus)
FAD_binding_34LEU A 309 - LEU A 725
LEU A 117 - LEU A 765
ALA A 115 - ALA A 767
PHE A 73 - PHE A 820
None
0.65ANA20.51
3mruAMINOACYL-HISTIDINE DIPEPTIDASE
(Vibrio alginolyticus)
M20_dimer
Peptidase_M20
4LEU A 77 - LEU A 725
LEU A 483 - LEU A 765
ALA A 485 - ALA A 767
ILE A 141 - ILE A 824
None
0.66ANA21.56
5e31PENICILLIN BINDING PROTEIN 2 PRIME
(Enterococcus faecium do)
MecA_N
PBP_dimer
Transpeptidase
4LEU A 274 - LEU A 725
LEU A 568 - LEU A 765
ALA A 570 - ALA A 767
ILE A 569 - ILE A 768
None
0.66ANA20.34
4y4qSORTASE, SRTB FAMILY
(Streptococcus pneumoniae pcs8235)
Sortase4LEU A 238 - LEU A 765
ALA A 254 - ALA A 767
ILE A 236 - ILE A 768
ILE A 127 - ILE A 824
None
0.66ANA20.96
3zvkTOXIN OF TOXIN-ANTITOXIN SYSTEM
(Rickettsia felis;
synthetic construct
)
PIN4LEU A 25 - LEU A 725
LEU A 5 - LEU A 765
ILE A 36 - ILE A 768
ILE A 34 - ILE A 824
None
0.67ANA16.18
5yjdCSM3
(Staphylococcus epidermidis rp62a)
RAMPs4LEU A 96 - LEU A 725
ILE A 199 - ILE A 768
PHE A 166 - PHE A 820
ILE A 169 - ILE A 824
None
CA  A 301 (-4.9A)
None
None
0.67ANA19.94
1r7jCONSERVED HYPOTHETICAL PROTEIN SSO10A
(Sulfolobus solfataricus)
HTH_454LEU A 14 - LEU A 765
ALA A 12 - ALA A 767
ILE A 13 - ILE A 768
ILE A 49 - ILE A 824
None
0.67ANA16.50
3rl5METALLOPHOSPHOESTERASE MPPED2
(Rattus norvegicus)
Metallophos4LEU A 162 - LEU A 765
ALA A 177 - ALA A 767
ILE A 114 - ILE A 768
ILE A 112 - ILE A 824
None
0.67ANA21.95
HitMacromolecule/
Organism
PfamRes.Residue MatchesHETATM Residue/sRMSDDali Z-scoreSeq. Identity (%)ViewDock




List of all similar binding patterns of amino acids (1TBF_A_VIAA501_0, 10 residues)
Note that only 3-12 residue patterns can be used for ASSAM searches, thus the binding sites are divided into fragments.
Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the 'View' column to view superposed patterns of amino acids - Superposition on full binding site)
(Click the 'Script' button to download a python script for molecular docking in UCSF Chimera)

HitMacromolecule/
Organism
PfamRes.Residue MatchesHETATM Residue/sRMSDDali Z-scoreSeq. Identity (%)ViewDock
5jo3CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I10TYR B 612 - TYR A 612
HIS B 613 - HIS A 613
ALA B 779 - ALA A 779
VAL B 782 - VAL A 782
ALA B 783 - ALA A 783
PHE B 786 - PHE A 786
LEU B 804 - LEU A 804
ILE B 813 - ILE A 813
MET B 816 - MET A 816
GLN B 817 - GLN A 817
None
ZN  B 901 ( 4.9A)
6LK  B 903 (-3.7A)
6LK  B 903 ( 4.9A)
None
None
6LK  B 903 (-4.0A)
None
6LK  B 903 (-4.0A)
6LK  B 903 (-3.3A)
0.51A54.399.69
1tbfCGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I9TYR A 612 - TYR A 612
HIS A 613 - HIS A 613
ALA A 779 - ALA A 779
VAL A 782 - VAL A 782
ALA A 783 - ALA A 783
PHE A 786 - PHE A 786
LEU A 804 - LEU A 804
ILE A 813 - ILE A 813
GLN A 817 - GLN A 817
None
None
VIA  A 501 (-4.6A)
VIA  A 501 ( 4.6A)
VIA  A 501 ( 3.9A)
VIA  A 501 (-4.9A)
VIA  A 501 (-4.4A)
VIA  A 501 ( 4.6A)
VIA  A 501 (-3.0A)
0.04A57.9100.00
7jsnROD CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE SUBUNIT BETA
(Bos taurus)
GAF
PDEase_I
7TYR B 556 - TYR A 612
HIS B 557 - HIS A 613
ALA B 733 - ALA A 779
VAL B 736 - VAL A 782
ALA B 737 - ALA A 783
PHE B 740 - PHE A 786
GLN B 771 - GLN A 817
None
None
None
VDN  B 904 ( 4.8A)
VDN  B 904 ( 4.1A)
None
VDN  B 904 ( 3.0A)
0.50A38.420.05
1tbfCGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I7TYR A 612 - TYR A 612
HIS A 613 - HIS A 613
VAL A 782 - VAL A 782
PHE A 786 - PHE A 786
LEU A 804 - LEU A 804
MET A 816 - MET A 816
GLN A 817 - GLN A 817
None
None
VIA  A 501 ( 4.6A)
VIA  A 501 (-4.9A)
VIA  A 501 (-4.4A)
VIA  A 501 ( 4.3A)
VIA  A 501 (-3.0A)
0.61A57.9100.00
5u00CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I6TYR A 655 - TYR A 612
HIS A 656 - HIS A 613
ALA A 823 - ALA A 779
PHE A 830 - PHE A 786
ILE A 855 - ILE A 813
GLN A 859 - GLN A 817
None
7OV  A1001 (-4.0A)
None
7OV  A1001 (-4.3A)
None
7OV  A1001 (-3.1A)
0.40A44.336.09
6cycCGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I6TYR A 655 - TYR A 612
HIS A 656 - HIS A 613
ALA A 823 - ALA A 779
PHE A 830 - PHE A 786
ILE A 855 - ILE A 813
GLN A 859 - GLN A 817
FKJ  A1003 (-4.7A)
FKJ  A1003 (-4.6A)
None
EDO  A1005 ( 3.8A)
None
FKJ  A1003 (-3.0A)
0.47A43.435.19
7jsnROD CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE SUBUNIT ALPHA
(Bos taurus)
GAF
PDEase_I
6TYR A 558 - TYR A 612
HIS A 559 - HIS A 613
ALA A 735 - ALA A 779
VAL A 738 - VAL A 782
ALA A 739 - ALA A 783
PHE A 742 - PHE A 786
None
None
None
None
VDN  A 904 ( 3.9A)
None
0.51A23.120.00
1zklHIGH-AFFINITY CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 7A
(Homo sapiens)
PDEase_I6TYR A 211 - TYR A 612
HIS A 212 - HIS A 613
VAL A 380 - VAL A 782
PHE A 384 - PHE A 786
ILE A 409 - ILE A 813
GLN A 413 - GLN A 817
IBM  A 503 (-4.6A)
None
IBM  A 503 (-4.7A)
IBM  A 503 (-4.5A)
None
IBM  A 503 (-3.0A)
0.51A38.529.52
2r8qCLASS I PHOSPHODIESTERASE PDEB1
(Leishmania major)
PDEase_I6TYR A 680 - TYR A 612
HIS A 681 - HIS A 613
ALA A 850 - ALA A 779
VAL A 853 - VAL A 782
PHE A 857 - PHE A 786
GLN A 887 - GLN A 817
IBM  A   3 ( 4.7A)
IBM  A   3 ( 4.8A)
None
IBM  A   3 ( 4.8A)
IBM  A   3 (-4.9A)
IBM  A   3 (-3.3A)
0.51A40.831.69
6fe3PHOSPHODIESTERASE
(Trypanosoma brucei)
PDEase_I6TYR A 668 - TYR A 612
HIS A 669 - HIS A 613
ALA A 837 - ALA A 779
VAL A 840 - VAL A 782
PHE A 844 - PHE A 786
GLN A 874 - GLN A 817
None
None
D68  A1003 (-4.0A)
D68  A1003 (-4.9A)
D68  A1003 (-4.9A)
D68  A1003 (-3.2A)
0.63A39.931.65
5h2qPHOSPHODIESTERASE
(Trypanosoma brucei brucei)
PDEase_I5TYR A 668 - TYR A 612
HIS A 669 - HIS A 613
ALA A 838 - ALA A 779
VAL A 841 - VAL A 782
PHE A 845 - PHE A 786
LLI  A1003 ( 4.9A)
None
LLI  A1003 ( 4.3A)
LLI  A1003 (-4.6A)
LLI  A1003 (-4.6A)
0.36A40.933.71
3ecmHIGH AFFINITY CAMP-SPECIFIC AND IBMX-INSENSITIVE 3',5'-CYCLIC PHOSPHODIESTERASE 8A
(Homo sapiens)
PDEase_I5TYR A 555 - TYR A 612
HIS A 556 - HIS A 613
ALA A 741 - ALA A 779
ILE A 774 - ILE A 813
GLN A 778 - GLN A 817
None
0.43A38.427.30
5h2qPHOSPHODIESTERASE
(Trypanosoma brucei brucei)
PDEase_I5TYR A 668 - TYR A 612
HIS A 669 - HIS A 613
ALA A 838 - ALA A 779
VAL A 841 - VAL A 782
GLN A 875 - GLN A 817
LLI  A1003 ( 4.9A)
None
LLI  A1003 ( 4.3A)
LLI  A1003 (-4.6A)
LLI  A1003 (-3.1A)
0.54A40.933.71
7jsnROD CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE SUBUNIT ALPHA
(Bos taurus)
GAF
PDEase_I
5HIS A 559 - HIS A 613
ALA A 735 - ALA A 779
VAL A 738 - VAL A 782
ALA A 739 - ALA A 783
GLN A 773 - GLN A 817
None
None
None
VDN  A 904 ( 3.9A)
VDN  A 904 ( 3.3A)
0.59A23.120.00
3so6LDL RECEPTOR ADAPTOR PROTEIN
(Rattus norvegicus;
synthetic construct
)
PID5ALA A 163 - ALA A 779
VAL A 166 - VAL A 782
ALA A 167 - ALA A 783
PHE A 170 - PHE A 786
ILE A 112 - ILE A 813
None
0.62ANA20.06
1zklHIGH-AFFINITY CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 7A
(Homo sapiens)
PDEase_I5HIS A 212 - HIS A 613
VAL A 380 - VAL A 782
PHE A 384 - PHE A 786
LEU A 401 - LEU A 804
GLN A 413 - GLN A 817
None
IBM  A 503 (-4.7A)
IBM  A 503 (-4.5A)
None
IBM  A 503 (-3.0A)
0.73A38.529.52
2dfaHYPOTHETICAL UPF0271 PROTEIN TTHB195
(Thermus thermophilus)
LamB_YcsF5ALA A 229 - ALA A 779
VAL A 232 - VAL A 782
ALA A 233 - ALA A 783
LEU A 5 - LEU A 804
ILE A 24 - ILE A 813
None
0.94ANA20.22
4uejGALACTITOL-1-PHOSPHATE 5-DEHYDROGENASE
(Escherichia coli)
ADH_N
ADH_zinc_N
5ALA A 250 - ALA A 779
VAL A 247 - VAL A 782
ALA A 246 - ALA A 783
LEU A 258 - LEU A 804
ILE A 233 - ILE A 813
None
0.95ANA22.04
5oesGLUTATHIONE SYNTHETASE
(Solanum tuberosum)
GSH_synth_ATP
GSH_synthase
5ALA A 77 - ALA A 779
VAL A 80 - VAL A 782
ALA A 81 - ALA A 783
PHE A 84 - PHE A 786
LEU A 154 - LEU A 804
None
1.01ANA21.50
5oesGLUTATHIONE SYNTHETASE
(Solanum tuberosum)
GSH_synth_ATP
GSH_synthase
5VAL A 80 - VAL A 782
ALA A 81 - ALA A 783
PHE A 84 - PHE A 786
LEU A 154 - LEU A 804
ILE A 437 - ILE A 813
None
1.05ANA21.50
4ft4DNA (CYTOSINE-5)-METHYLTRANSFERASE 1
(Zea mays;
synthetic construct
)
BAH
Chromo
DNA_methylase
5TYR B 597 - TYR A 612
ALA B 854 - ALA A 779
VAL B 857 - VAL A 782
ALA B 858 - ALA A 783
LEU B 557 - LEU A 804
None
1.18ANA18.17
3k11PUTATIVE GLYCOSYL HYDROLASE
(Bacteroides thetaiotaomicron vpi-5482)
Glyco_hydro_885TYR A 83 - TYR A 612
VAL A 137 - VAL A 782
ALA A 138 - ALA A 783
PHE A 141 - PHE A 786
ILE A 158 - ILE A 813
None
1.20ANA20.95
2ocdL-ASPARAGINASE I
(Vibrio cholerae)
Asparaginase
Asparaginase_C
5VAL A 205 - VAL A 782
PHE A 105 - PHE A 786
LEU A 101 - LEU A 804
ILE A 208 - ILE A 813
GLN A 69 - GLN A 817
None
1.22ANA21.28
4i9fGLYCEROL 3-PHOSPHATE PHOSPHATASE
(Mycobacterium tuberculosis)
GNAT_like
Hydrolase_6
Hydrolase_like
5TYR A 240 - TYR A 612
ALA A 306 - ALA A 779
VAL A 239 - VAL A 782
ALA A 238 - ALA A 783
ILE A 250 - ILE A 813
None
1.23ANA20.37
6sfwATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX
(Listeria monocytogenes)
AAA_2
ClpB_D2-small
zf-C4_ClpX
5TYR O 93 - TYR A 612
ALA O 88 - ALA A 779
VAL O 89 - VAL A 782
ALA O 86 - ALA A 783
LEU O 71 - LEU A 804
None
1.25ANA23.52
6puxHOMOSERINE O-ACETYLTRANSFERASE
(Mycobacterium tuberculosis (strain atcc 25618 / h37rv))
Abhydrolase_15ALA A 97 - ALA A 779
VAL A 98 - VAL A 782
ALA A 99 - ALA A 783
LEU A 57 - LEU A 804
ILE A 66 - ILE A 813
None
1.25ANA22.03
3qan1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1
(Bacillus halodurans)
Aldedh5VAL A 422 - VAL A 782
ALA A 423 - ALA A 783
PHE A 424 - PHE A 786
LEU A 337 - LEU A 804
MET A 385 - MET A 816
None
1.26ANA20.30
3jxv70 KDA PEPTIDYL-PROLYL ISOMERASE
(Triticum aestivum)
FKBP_C5HIS A 207 - HIS A 613
ALA A 215 - ALA A 779
ALA A 211 - ALA A 783
LEU A 255 - LEU A 804
ILE A 159 - ILE A 813
None
1.31ANA20.32
4qawXYN30D
(Paenibacillus barcinonensis)
CBM_65TYR A 54 - TYR A 612
HIS A 23 - HIS A 613
ALA A 81 - ALA A 783
ILE A 133 - ILE A 813
MET A 170 - MET A 816
None
1.32ANA18.52
3ddjCBS DOMAIN-CONTAINING PROTEIN
(Sulfolobus solfataricus)
CBS5ALA A 196 - ALA A 779
VAL A 197 - VAL A 782
ALA A 194 - ALA A 783
PHE A 24 - PHE A 786
LEU A 51 - LEU A 804
None
1.42ANA24.10
3cwnTRANSALDOLASE B
(Escherichia coli)
TAL_FSA5TYR A 218 - TYR A 612
ALA A 170 - ALA A 779
ALA A 166 - ALA A 783
LEU A 158 - LEU A 804
ILE A 140 - ILE A 813
None
1.43ANA26.39
2e1dTRANSALDOLASE
(Mus musculus)
TAL_FSA5TYR A 229 - TYR A 612
ALA A 181 - ALA A 779
ALA A 177 - ALA A 783
LEU A 169 - LEU A 804
ILE A 150 - ILE A 813
None
1.46ANA23.12
HitMacromolecule/
Organism
PfamRes.Residue MatchesHETATM Residue/sRMSDDali Z-scoreSeq. Identity (%)ViewDock




List of all similar binding patterns of amino acids (1TBF_A_VIAA501_1, 6 residues)
Note that only 3-12 residue patterns can be used for ASSAM searches, thus the binding sites are divided into fragments.
Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the 'View' column to view superposed patterns of amino acids - Superposition on full binding site)
(Click the 'Script' button to download a python script for molecular docking in UCSF Chimera)

HitMacromolecule/
Organism
PfamRes.Residue MatchesHETATM Residue/sRMSDDali Z-scoreSeq. Identity (%)ViewDock
1tbfCGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I6LEU A 725 - LEU A 725
LEU A 765 - LEU A 765
ALA A 767 - ALA A 767
ILE A 768 - ILE A 768
PHE A 820 - PHE A 820
ILE A 824 - ILE A 824
None
VIA  A 501 ( 4.8A)
VIA  A 501 ( 4.0A)
None
VIA  A 501 (-3.7A)
None
0.00A57.9100.00
5jo3CGMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I6LEU B 725 - LEU A 725
LEU B 765 - LEU A 765
ALA B 767 - ALA A 767
ILE B 768 - ILE A 768
PHE B 820 - PHE A 820
ILE B 824 - ILE A 824
None
6LK  B 903 (-4.5A)
6LK  B 903 (-3.5A)
6LK  B 903 (-4.2A)
6LK  B 903 (-3.4A)
None
0.56A54.399.69
3ksmABC-TYPE SUGAR TRANSPORT SYSTEM, PERIPLASMIC COMPONENT
(Hahella chejuensis)
Peripla_BP_45LEU A 264 - LEU A 725
ALA A 243 - ALA A 767
ILE A 244 - ILE A 768
PHE A 255 - PHE A 820
ILE A 273 - ILE A 824
None
0.82ANA22.93
1bu8PROTEIN (PANCREATIC LIPASE RELATED PROTEIN 2)
(Rattus norvegicus)
Lipase
PLAT
5LEU A 131 - LEU A 765
ALA A 129 - ALA A 767
ILE A 128 - ILE A 768
PHE A 72 - PHE A 820
ILE A 102 - ILE A 824
None
0.87ANA21.70
6ac8MYCOBACTERIUM SMEGMATIS MFD
(Mycobacterium smegmatis mc2 155)
CarD_CdnL_TRCF
DEAD
Helicase_C
TRCF
UvrB_inter
5LEU A 481 - LEU A 725
LEU A 16 - LEU A 765
ALA A 14 - ALA A 767
ILE A 13 - ILE A 768
ILE A 483 - ILE A 824
None
None
SO4  A1306 (-4.5A)
None
None
0.94ANA14.85
3kv0HET-C2
(Podospora anserina)
GLTP5LEU A 107 - LEU A 725
LEU A 197 - LEU A 765
ILE A 193 - ILE A 768
PHE A 41 - PHE A 820
ILE A 88 - ILE A 824
None
MLY  A 198 ( 4.3A)
MLY  A 192 ( 4.3A)
None
None
0.94ANA23.85
3sxxPEROXISOMAL PRIMARY AMINE OXIDASE
(Pichia angusta)
Cu_amine_oxid
Cu_amine_oxidN2
Cu_amine_oxidN3
5LEU A 643 - LEU A 765
ALA A 418 - ALA A 767
ILE A 419 - ILE A 768
PHE A 293 - PHE A 820
ILE A 464 - ILE A 824
None
0.94ANA18.30
4xaiMALTOSE-BINDING PERIPLASMIC PROTEIN,TAILLESS ORTHOLOG
(Escherichia coli o157:h7;
tribolium castaneum;
synthetic construct
)
SBP_bac_15LEU A1292 - LEU A 725
LEU A1300 - LEU A 765
ALA A1302 - ALA A 767
ILE A1303 - ILE A 768
ILE A1358 - ILE A 824
None
0.96ANA22.98
4udqGLUCOSE-METHANOL-CHOLINE OXIDOREDUCTASE
(Methylovorus sp. mp688)
GMC_oxred_C
GMC_oxred_N
5LEU A 458 - LEU A 725
LEU A 410 - LEU A 765
ILE A 413 - ILE A 768
PHE A 368 - PHE A 820
ILE A 310 - ILE A 824
None
1.01ANA20.59
1hc7PROLYL-TRNA SYNTHETASE
(Thermus thermophilus)
HGTP_anticodon
ProRS-C_1
tRNA-synt_2b
5LEU A 285 - LEU A 725
LEU A 185 - LEU A 765
ALA A 183 - ALA A 767
PHE A 265 - PHE A 820
ILE A 50 - ILE A 824
None
1.04ANA21.15
3hjvMALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE
(Vibrio cholerae)
Acyl_transf_15LEU A 118 - LEU A 725
ALA A 251 - ALA A 767
ILE A 248 - ILE A 768
PHE A 226 - PHE A 820
ILE A 110 - ILE A 824
None
1.09ANA20.33
3nrgTETR FAMILY TRANSCRIPTIONAL REGULATOR
(Chloroflexus aurantiacus)
TetR_N5LEU A 174 - LEU A 765
ALA A 179 - ALA A 767
ILE A 175 - ILE A 768
PHE A 102 - PHE A 820
ILE A 98 - ILE A 824
None
1.09ANA20.00
2okcTYPE I RESTRICTION ENZYME STYSJI M PROTEIN
(Bacteroides thetaiotaomicron vpi-5482)
HsdM_N
N6_Mtase
5LEU A 330 - LEU A 725
LEU A 425 - LEU A 765
ILE A 427 - ILE A 768
PHE A 364 - PHE A 820
ILE A 333 - ILE A 824
None
1.11ANA22.15
4b63L-ORNITHINE N5 MONOOXYGENASE
(Aspergillus fumigatus)
K_oxygenase5LEU A 31 - LEU A 725
ALA A 53 - ALA A 767
ILE A 54 - ILE A 768
PHE A 81 - PHE A 820
ILE A 79 - ILE A 824
None
1.12ANA22.71
4cj0ENDOGLUCANASE D
(Clostridium thermocellum;
synthetic construct
)
CelD_N
Dockerin_1
Glyco_hydro_9
5LEU A 487 - LEU A 765
ALA A 489 - ALA A 767
ILE A 490 - ILE A 768
PHE A 571 - PHE A 820
ILE A 62 - ILE A 824
None
1.12ANA20.09
3si2GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE
(Mus musculus)
Peptidase_M285LEU A 321 - LEU A 725
LEU A 272 - LEU A 765
ALA A 274 - ALA A 767
ILE A 275 - ILE A 768
ILE A 352 - ILE A 824
None
1.22ANA22.16
3nyiFAT ACID-BINDING PROTEIN
(Eubacterium ventriosum)
DegV5LEU A 152 - LEU A 725
LEU A 131 - LEU A 765
ILE A 132 - ILE A 768
PHE A 87 - PHE A 820
ILE A 119 - ILE A 824
None
1.22ANA22.47
3lykSTRINGENT STARVATION PROTEIN A HOMOLOG
(Haemophilus influenzae)
GST_C5LEU A 165 - LEU A 725
LEU A 136 - LEU A 765
ILE A 139 - ILE A 768
PHE A 143 - PHE A 820
ILE A 183 - ILE A 824
None
1.23ANA20.23
3b8aHEXOKINASE-1
(Saccharomyces cerevisiae)
Hexokinase_1
Hexokinase_2
5LEU X 56 - LEU A 725
ALA X 402 - ALA A 767
ILE X 403 - ILE A 768
PHE X 240 - PHE A 820
ILE X 266 - ILE A 824
None
1.27ANA22.13
4nhoPROBABLE ATP-DEPENDENT RNA HELICASE DDX23
(Homo sapiens)
DEAD
Helicase_C
5LEU A 680 - LEU A 725
LEU A 655 - LEU A 765
ALA A 657 - ALA A 767
ILE A 658 - ILE A 768
ILE A 669 - ILE A 824
None
1.28ANA20.83
1nkgRHAMNOGALACTURONASE B
(Aspergillus aculeatus)
CBM-like
RhgB_N
fn3_3
5LEU A 55 - LEU A 725
LEU A 78 - LEU A 765
ALA A 99 - ALA A 767
ILE A 97 - ILE A 768
ILE A 51 - ILE A 824
None
1.29ANA18.81
3rp8FLAVOPROTEIN MONOOXYGENASE
(Klebsiella pneumoniae)
FAD_binding_35LEU A 207 - LEU A 725
LEU A 252 - LEU A 765
ALA A 254 - ALA A 767
ILE A 253 - ILE A 768
PHE A 219 - PHE A 820
None
1.30ANA25.12
3w0lGLUCOKINASE REGULATORY PROTEIN
(Xenopus laevis)
NA5LEU B 406 - LEU A 725
LEU B 315 - LEU A 765
ALA B 313 - ALA A 767
ILE B 312 - ILE A 768
ILE B 435 - ILE A 824
None
1.35ANA22.12
2bw3TRANSPOSASE
(Musca domestica)
DBD_Tnp_Hermes
Dimer_Tnp_hAT
5LEU A 257 - LEU A 725
LEU A 228 - LEU A 765
ALA A 230 - ALA A 767
ILE A 231 - ILE A 768
ILE A 179 - ILE A 824
None
1.37ANA21.64
2zf8COMPONENT OF SODIUM-DRIVEN POLAR FLAGELLAR MOTOR
(Vibrio alginolyticus)
MotY_N
OmpA
5LEU A 173 - LEU A 725
LEU A 181 - LEU A 765
ALA A 185 - ALA A 767
ILE A 184 - ILE A 768
ILE A 163 - ILE A 824
None
1.37ANA22.13
5i92GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE
(Pseudomonas aeruginosa)
Aminotran_35LEU A 64 - LEU A 765
ALA A 406 - ALA A 767
ILE A 405 - ILE A 768
PHE A 320 - PHE A 820
ILE A 315 - ILE A 824
None
1.38ANA21.65
1fnnCELL DIVISION CONTROL PROTEIN 6
(Pyrobaculum aerophilum)
AAA_22
Cdc6_C
5LEU A 282 - LEU A 725
LEU A 293 - LEU A 765
ALA A 295 - ALA A 767
ILE A 296 - ILE A 768
ILE A 346 - ILE A 824
None
1.38ANA21.14
2vz8FATTY ACID SYNTHASE
(Sus scrofa)
ADH_zinc_N
Acyl_transf_1
KAsynt_C_assoc
KR
Ketoacyl-synt_C
Methyltransf_12
PP-binding
PS-DH
Thioesterase
ketoacyl-synt
5LEU A 404 - LEU A 725
LEU A 341 - LEU A 765
ALA A 339 - ALA A 767
ILE A 342 - ILE A 768
ILE A 6 - ILE A 824
None
1.41ANA8.50
1nu4U1A RNA BINDING DOMAIN
(Homo sapiens)
RRM_15LEU A 17 - LEU A 725
LEU A 30 - LEU A 765
ALA A 32 - ALA A 767
ILE A 33 - ILE A 768
ILE A 14 - ILE A 824
None
1.41ANA13.51
4pkdU1 SMALL NUCLEAR RIBONUCLEOPROTEIN A,U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA
(Sus scrofa;
homo sapiens;
synthetic construct
)
RRM_15LEU B 17 - LEU A 725
LEU B 30 - LEU A 765
ALA B 32 - ALA A 767
ILE B 33 - ILE A 768
ILE B 14 - ILE A 824
None
1.43ANA18.72
3w6jSCPA
(Geobacillus stearothermophilus)
NA5LEU A 21 - LEU A 725
LEU A 69 - LEU A 765
ALA A 71 - ALA A 767
ILE A 72 - ILE A 768
ILE A 40 - ILE A 824
None
1.44ANA20.06
5u00CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE
(Homo sapiens)
PDEase_I4LEU A 770 - LEU A 725
LEU A 809 - LEU A 765
PHE A 862 - PHE A 820
ILE A 866 - ILE A 824
None
7OV  A1001 ( 4.6A)
7OV  A1001 (-3.9A)
None
0.35A44.336.09
2dlyFYN-RELATED KINASE
(Mus musculus)
SH24LEU A 106 - LEU A 725
LEU A 56 - LEU A 765
ILE A 69 - ILE A 768
PHE A 91 - PHE A 820
None
0.44ANA15.03
3i3wPHOSPHOGLUCOSAMINE MUTASE
(Francisella tularensis subsp. tularensis)
PGM_PMM_I
PGM_PMM_II
PGM_PMM_III
PGM_PMM_IV
4LEU A 27 - LEU A 725
LEU A 112 - LEU A 765
PHE A 5 - PHE A 820
ILE A 10 - ILE A 824
None
0.45ANA20.40
3hc7GENE 12 PROTEIN
(Mycobacterium phage d29)
Cutinase4LEU A 204 - LEU A 725
ALA A 221 - ALA A 767
ILE A 222 - ILE A 768
ILE A 186 - ILE A 824
None
0.46ANA20.72
3dzdTRANSCRIPTIONAL REGULATOR (NTRC FAMILY)
(Aquifex aeolicus)
Response_reg
Sigma54_activat
4LEU A 21 - LEU A 765
ILE A 20 - ILE A 768
PHE A 109 - PHE A 820
ILE A 113 - ILE A 824
None
0.49ANA22.83
2v4uCTP SYNTHASE 2
(Homo sapiens)
GATase4LEU A 382 - LEU A 765
ALA A 384 - ALA A 767
ILE A 385 - ILE A 768
ILE A 407 - ILE A 824
None
0.49ANA25.41
1co6PROTEIN (CYTOCHROME C2)
(Blastochloris viridis)
Cytochrom_C4LEU A 93 - LEU A 765
ILE A 94 - ILE A 768
PHE A 63 - PHE A 820
ILE A 67 - ILE A 824
None
None
HEC  A 108 (-4.7A)
None
0.51ANA14.38
1wquPROTO-ONCOGENE TYROSINE-PROTEIN KINASE FES/FPS
(Homo sapiens)
SH24LEU A 103 - LEU A 725
LEU A 51 - LEU A 765
ILE A 64 - ILE A 768
ILE A 85 - ILE A 824
None
0.53ANA17.42
4pkdU1 SMALL NUCLEAR RIBONUCLEOPROTEIN A,U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA
(Sus scrofa;
homo sapiens;
synthetic construct
)
RRM_14LEU B 30 - LEU A 765
ALA B 32 - ALA A 767
ILE B 33 - ILE A 768
PHE B 77 - PHE A 820
None
0.54ANA18.72
4eo92,3-BISPHOSPHOGLYCERATE-DEPENDENT PHOSPHOGLYCERATE MUTASE
(Mycobacterium leprae)
His_Phos_14LEU A 192 - LEU A 725
LEU A 9 - LEU A 765
ALA A 7 - ALA A 767
ILE A 182 - ILE A 824
None
0.56ANA21.75
5v4sTRANSPORTER, CATION CHANNEL FAMILY / CYCLIC NUCLEOTIDE-BINDING DOMAIN MULTI-DOMAIN PROTEIN
(Leptospira licerasiae serovar varillal str. var 010)
Ion_trans
cNMP_binding
4LEU A 133 - LEU A 725
LEU A 151 - LEU A 765
ALA A 153 - ALA A 767
ILE A 129 - ILE A 824
None
0.56ANA24.95
4qhjUNCHARACTERIZED PROTEIN MJ1213
(Methanocaldococcus jannaschii)
Peptidase_M564LEU A 7 - LEU A 725
LEU A 55 - LEU A 765
ILE A 54 - ILE A 768
ILE A 63 - ILE A 824
None
0.56ANA16.52
5cuwSRTE1
(Streptomyces coelicolor (strain atcc baa-471 / a3(2) / m145))
Sortase4LEU A 317 - LEU A 725
LEU A 200 - LEU A 765
ALA A 198 - ALA A 767
ILE A 271 - ILE A 824
None
0.57ANA20.54
3qioGAG-POL POLYPROTEIN,RIBONUCLEASE HI,GAG-POL POLYPROTEIN
(Human immunodeficiency virus type 1 group m subtype b;
escherichia coli (strain k12);
human immunodeficiency virus type 1 group m subtype b (isolate hxb2)
)
RNase_H4LEU A 479 - LEU A 765
ALA A 481 - ALA A 767
ILE A 482 - ILE A 768
ILE A 505 - ILE A 824
None
0.57ANA17.38
4v2xENDO-BETA-1,4-GLUCANASE (CELLULASE B)
(Bacillus halodurans)
CBM46
CBM_X2
Cellulase
4LEU A 425 - LEU A 765
ALA A 427 - ALA A 767
ILE A 428 - ILE A 768
ILE A 373 - ILE A 824
None
0.58ANA23.57
1sa3TYPE II RESTRICTION ENZYME MSPI
(Moraxella sp.;
synthetic construct
)
Endonuc-MspI4LEU A 48 - LEU A 725
LEU A 67 - LEU A 765
ALA A 69 - ALA A 767
ILE A 77 - ILE A 824
None
0.58ANA23.08
3ighUNCHARACTERIZED METAL-DEPENDENT HYDROLASE
(Pyrococcus horikoshii)
Amidohydro_34LEU X 138 - LEU A 765
ALA X 140 - ALA A 767
ILE X 141 - ILE A 768
ILE X 147 - ILE A 824
None
0.58ANA22.04
4pv4PROLINE AMINOPEPTIDASE P II
(Yersinia pestis)
AMP_N
Peptidase_M24
4LEU A 323 - LEU A 725
LEU A 385 - LEU A 765
ILE A 402 - ILE A 768
ILE A 290 - ILE A 824
None
0.58ANA22.66
3cblPROTO-ONCOGENE TYROSINE-PROTEIN KINASE FES/FPS
(Homo sapiens;
synthetic construct
)
PK_Tyr_Ser-Thr
SH2
4LEU A 545 - LEU A 725
LEU A 493 - LEU A 765
ILE A 506 - ILE A 768
ILE A 527 - ILE A 824
None
0.58ANA20.81
1ag9FLAVODOXIN
(Escherichia coli)
Flavodoxin_14LEU A 52 - LEU A 725
LEU A 73 - LEU A 765
PHE A 78 - PHE A 820
ILE A 109 - ILE A 824
None
0.59ANA20.56
5h5xPUTATIVE OXIDOREDUCTASE
(Streptomyces coelicolor (strain atcc baa-471 / a3(2) / m145))
adh_short_C24LEU A 140 - LEU A 765
ALA A 142 - ALA A 767
ILE A 143 - ILE A 768
ILE A 195 - ILE A 824
None
0.60ANA19.06
1ci9PROTEIN (CARBOXYLESTERASE)
(Burkholderia gladioli)
Beta-lactamase4LEU A 302 - LEU A 725
LEU A 96 - LEU A 765
ALA A 98 - ALA A 767
ILE A 121 - ILE A 768
None
0.60ANA20.09
1otkPHENYLACETIC ACID DEGRADATION PROTEIN PAAC
(Escherichia coli)
NA4LEU A 5 - LEU A 725
LEU A 120 - LEU A 765
ALA A 122 - ALA A 767
ILE A 123 - ILE A 768
None
0.60ANA20.79
2v3zXAA-PRO AMINOPEPTIDASE
(Escherichia coli;
synthetic construct
)
AMP_N
Peptidase_M24
4LEU A 325 - LEU A 725
LEU A 386 - LEU A 765
ILE A 403 - ILE A 768
ILE A 292 - ILE A 824
None
0.60ANA21.51
3wqbEXTRACELLULAR SERINE PROTEASE
(Aeromonas sobria)
P_proprotein
Peptidase_S8
4LEU A 365 - LEU A 725
ALA A 136 - ALA A 767
ILE A 135 - ILE A 768
ILE A 417 - ILE A 824
None
0.60ANA21.49
3hazPROLINE DEHYDROGENASE
(Bradyrhizobium japonicum usda 110)
Aldedh
Pro_dh
Pro_dh-DNA_bdg
4LEU A 904 - LEU A 765
ALA A 906 - ALA A 767
ILE A 907 - ILE A 768
ILE A 929 - ILE A 824
None
0.60ANA15.77
5kazSH2 DOMAIN-CONTAINING PROTEIN 1B
(Homo sapiens)
SH24LEU A 97 - LEU A 725
LEU A 42 - LEU A 765
ILE A 55 - ILE A 768
ILE A 83 - ILE A 824
None
0.61ANA15.00
4g1qREVERSE TRANSCRIPTASE/RIBONUCLEASE H
(Human immunodeficiency virus type 1)
RVT_1
RVT_connect
RVT_thumb
4LEU A 479 - LEU A 765
ALA A 481 - ALA A 767
ILE A 482 - ILE A 768
ILE A 505 - ILE A 824
None
0.61ANA20.64
3eo8BLUB-LIKE FLAVOPROTEIN
(Clostridium difficile 630)
Nitroreductase4LEU A 150 - LEU A 765
ALA A 152 - ALA A 767
ILE A 153 - ILE A 768
ILE A 7 - ILE A 824
None
0.61ANA19.54
3ddsGLYCOGEN PHOSPHORYLASE, LIVER FORM
(Homo sapiens)
Phosphorylase4LEU A 765 - LEU A 725
LEU A 581 - LEU A 765
ILE A 584 - ILE A 768
ILE A 742 - ILE A 824
None
0.61ANA17.65
4c91ALPHA-GLUCURONIDASE GH115
(Bacteroides ovatus)
GH115_C
Glyco_hydro_115
4LEU A 46 - LEU A 725
LEU A 160 - LEU A 765
ILE A 157 - ILE A 768
ILE A 96 - ILE A 824
None
0.61ANA15.99
2erfTHROMBOSPONDIN-1
(Homo sapiens)
NA4LEU A 130 - LEU A 725
LEU A 149 - LEU A 765
ALA A 147 - ALA A 767
ILE A 138 - ILE A 824
None
0.61ANA19.65
2mcaUNCHARACTERIZED PROTEIN
(Eubacterium rectale)
DUF53004LEU A 13 - LEU A 765
ILE A 45 - ILE A 768
PHE A 47 - PHE A 820
ILE A 11 - ILE A 824
None
0.62ANA14.74
5nnyWIPB
(Legionella pneumophila)
NA4LEU A 137 - LEU A 725
LEU A 44 - LEU A 765
ILE A 43 - ILE A 768
ILE A 113 - ILE A 824
None
0.62ANA23.20
3nvnPLEXIN-C1
(Ectromelia virus;
homo sapiens
)
PSI4LEU B 429 - LEU A 725
LEU B 399 - LEU A 765
ILE B 416 - ILE A 768
ILE B 439 - ILE A 824
None
0.62ANA20.95
3m6iL-ARABINITOL 4-DEHYDROGENASE
(Neurospora crassa)
ADH_N
ADH_zinc_N
4LEU A 330 - LEU A 725
LEU A 197 - LEU A 765
ALA A 199 - ALA A 767
ILE A 223 - ILE A 824
None
0.62ANA20.66
2vifSUPPRESSOR OF CYTOKINE SIGNALLING 6
(Homo sapiens)
SH24LEU A 487 - LEU A 725
LEU A 420 - LEU A 765
ILE A 433 - ILE A 768
ILE A 458 - ILE A 824
None
0.62ANA17.01
5z2cALPHA-PROTEIN KINASE 1
(Homo sapiens)
NA4LEU A 239 - LEU A 725
LEU A 444 - LEU A 765
ILE A 445 - ILE A 768
ILE A 221 - ILE A 824
None
0.62ANA21.78
5tibSUGAR ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN,GASDERMIN-B
(Escherichia coli;
homo sapiens
)
Gasdermin_C4LEU A1279 - LEU A 725
LEU A1399 - LEU A 765
ILE A1398 - ILE A 768
PHE A1332 - PHE A 820
None
0.62ANA22.05
3pi7NADH OXIDOREDUCTASE
(Mesorhizobium loti)
ADH_N
ADH_zinc_N
4LEU A 150 - LEU A 765
ALA A 152 - ALA A 767
ILE A 153 - ILE A 768
ILE A 304 - ILE A 824
None
0.62ANA21.39
1gntHYBRID CLUSTER PROTEIN
(Desulfovibrio vulgaris)
Prismane4LEU A 183 - LEU A 725
LEU A 66 - LEU A 765
ALA A 68 - ALA A 767
ILE A 152 - ILE A 824
None
0.63ANA23.05
3sp1CYSTEINYL-TRNA SYNTHETASE
(Borrelia burgdorferi)
tRNA-synt_1e4LEU A 5 - LEU A 725
LEU A 49 - LEU A 765
ILE A 50 - ILE A 768
ILE A 235 - ILE A 824
None
0.63ANA23.31
2wzpLACTOCOCCAL PHAGE P2 ORF16
(Lactococcus phage p2;
lama glama
)
Caudo_bapla164ALA R 176 - ALA A 767
ILE R 179 - ILE A 768
PHE R 157 - PHE A 820
ILE R 156 - ILE A 824
None
0.63ANA22.14
4zcfRESTRICTION ENDONUCLEASE ECOP15I, RESTRICTION SUBUNIT
(Escherichia coli;
synthetic construct
)
RE_endonuc
ResIII
4LEU C 132 - LEU A 725
LEU C 144 - LEU A 765
ILE C 181 - ILE A 768
PHE C 99 - PHE A 820
None
0.64ANA16.29
3bgePREDICTED ATPASE
(Haemophilus influenzae)
MgsA_C4LEU A 294 - LEU A 765
ALA A 296 - ALA A 767
ILE A 297 - ILE A 768
ILE A 336 - ILE A 824
None
0.64ANA19.03
1f5nINTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 1
(Homo sapiens)
GBP
GBP_C
4LEU A 13 - LEU A 725
LEU A 31 - LEU A 765
ALA A 33 - ALA A 767
ILE A 34 - ILE A 768
None
0.64ANA20.10
1nc7HYPOTHETICAL PROTEIN TM1070
(Thermotoga maritima)
ASRT4LEU A 68 - LEU A 765
ILE A 73 - ILE A 768
PHE A 44 - PHE A 820
ILE A 81 - ILE A 824
None
0.64ANA20.55
3qokPUTATIVE CHITINASE II
(Klebsiella pneumoniae subsp. pneumoniae)
Glyco_hydro_184LEU A 84 - LEU A 725
LEU A 109 - LEU A 765
ILE A 148 - ILE A 768
ILE A 139 - ILE A 824
None
0.64ANA23.97
1nu4U1A RNA BINDING DOMAIN
(Homo sapiens)
RRM_14LEU A 30 - LEU A 765
ALA A 32 - ALA A 767
ILE A 33 - ILE A 768
PHE A 77 - PHE A 820
None
0.64ANA13.51
5kvkPROTEIN KP700603
(Klebsiella pneumoniae 700603)
CinA4LEU A 162 - LEU A 725
LEU A 23 - LEU A 765
ALA A 25 - ALA A 767
ILE A 104 - ILE A 824
None
0.64ANA18.05
3dxqCHOLINE/ETHANOLAMINE KINASE FAMILY PROTEIN
(Mesorhizobium loti)
Choline_kinase4LEU A 23 - LEU A 725
LEU A 10 - LEU A 765
ALA A 12 - ALA A 767
ILE A 13 - ILE A 768
None
0.64ANA21.28
4hkuTETR TRANSCRIPTIONAL REGULATOR
(Listeria monocytogenes)
TetR_C_27
TetR_N
4LEU A 125 - LEU A 765
ALA A 123 - ALA A 767
PHE A 68 - PHE A 820
ILE A 67 - ILE A 824
None
0.64ANA20.83
3ktsGLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN
(Listeria monocytogenes str. 4b)
NA4LEU A 41 - LEU A 725
LEU A 57 - LEU A 765
ILE A 84 - ILE A 768
ILE A 79 - ILE A 824
None
0.64ANA21.33
5imaBACTERIOFERRITIN COMIGRATORY PROTEIN
(Xanthomonas campestris pv. campestris (strain atcc 33913 / dsm 3586 / ncppb 528 / lmg 568 / p 25))
AhpC-TSA4LEU A 101 - LEU A 725
LEU A 27 - LEU A 765
ALA A 29 - ALA A 767
ILE A 37 - ILE A 824
None
0.65ANA18.52
2afwGLUTAMINYL-PEPTIDE CYCLOTRANSFERASE
(Homo sapiens)
Peptidase_M284LEU A 318 - LEU A 725
LEU A 271 - LEU A 765
ALA A 273 - ALA A 767
ILE A 274 - ILE A 768
None
0.65ANA22.49
4g6cBETA-HEXOSAMINIDASE 1
(Burkholderia cenocepacia)
Glyco_hydro_34LEU A 197 - LEU A 765
ALA A 195 - ALA A 767
ILE A 196 - ILE A 768
ILE A 239 - ILE A 824
None
0.65ANA23.44
3pihUVRABC SYSTEM PROTEIN A
(Thermotoga maritima;
synthetic construct
)
ABC_tran
UvrA_DNA-bind
UvrA_inter
4LEU A 635 - LEU A 725
LEU A 590 - LEU A 765
ALA A 588 - ALA A 767
ILE A 652 - ILE A 824
None
0.65ANA16.68
5ew8FIBROBLAST GROWTH FACTOR RECEPTOR 1
(Homo sapiens)
PK_Tyr_Ser-Thr4LEU A 465 - LEU A 725
LEU A 525 - LEU A 765
ALA A 520 - ALA A 767
ILE A 529 - ILE A 824
None
0.65ANA20.16
2qq8TBC1 DOMAIN FAMILY MEMBER 14
(Homo sapiens)
RabGAP-TBC4LEU A 504 - LEU A 765
ILE A 503 - ILE A 768
PHE A 465 - PHE A 820
ILE A 464 - ILE A 824
None
0.65ANA26.35
1xknPUTATIVE PEPTIDYL-ARGININE DEIMINASE
(Chlorobium tepidum)
PAD_porph4LEU A 155 - LEU A 725
LEU A 193 - LEU A 765
ILE A 199 - ILE A 768
ILE A 160 - ILE A 824
None
0.65ANA22.60
2d4aMALATE DEHYDROGENASE
(Aeropyrum pernix)
Ldh_1_C
Ldh_1_N
4LEU B 18 - LEU A 725
ALA B 235 - ALA A 767
ILE B 236 - ILE A 768
ILE B 2 - ILE A 824
None
0.65ANA22.07
4k5sOXYGENASE
(Streptomyces argillaceus)
FAD_binding_34LEU A 309 - LEU A 725
LEU A 117 - LEU A 765
ALA A 115 - ALA A 767
PHE A 73 - PHE A 820
None
0.65ANA20.51
3mruAMINOACYL-HISTIDINE DIPEPTIDASE
(Vibrio alginolyticus)
M20_dimer
Peptidase_M20
4LEU A 77 - LEU A 725
LEU A 483 - LEU A 765
ALA A 485 - ALA A 767
ILE A 141 - ILE A 824
None
0.66ANA21.56
5e31PENICILLIN BINDING PROTEIN 2 PRIME
(Enterococcus faecium do)
MecA_N
PBP_dimer
Transpeptidase
4LEU A 274 - LEU A 725
LEU A 568 - LEU A 765
ALA A 570 - ALA A 767
ILE A 569 - ILE A 768
None
0.66ANA20.34
4y4qSORTASE, SRTB FAMILY
(Streptococcus pneumoniae pcs8235)
Sortase4LEU A 238 - LEU A 765
ALA A 254 - ALA A 767
ILE A 236 - ILE A 768
ILE A 127 - ILE A 824
None
0.66ANA20.96
3zvkTOXIN OF TOXIN-ANTITOXIN SYSTEM
(Rickettsia felis;
synthetic construct
)
PIN4LEU A 25 - LEU A 725
LEU A 5 - LEU A 765
ILE A 36 - ILE A 768
ILE A 34 - ILE A 824
None
0.67ANA16.18
5yjdCSM3
(Staphylococcus epidermidis rp62a)
RAMPs4LEU A 96 - LEU A 725
ILE A 199 - ILE A 768
PHE A 166 - PHE A 820
ILE A 169 - ILE A 824
None
CA  A 301 (-4.9A)
None
None
0.67ANA19.94
1r7jCONSERVED HYPOTHETICAL PROTEIN SSO10A
(Sulfolobus solfataricus)
HTH_454LEU A 14 - LEU A 765
ALA A 12 - ALA A 767
ILE A 13 - ILE A 768
ILE A 49 - ILE A 824
None
0.67ANA16.50
3rl5METALLOPHOSPHOESTERASE MPPED2
(Rattus norvegicus)
Metallophos4LEU A 162 - LEU A 765
ALA A 177 - ALA A 767
ILE A 114 - ILE A 768
ILE A 112 - ILE A 824
None
0.67ANA21.95
HitMacromolecule/
Organism
PfamRes.Residue MatchesHETATM Residue/sRMSDDali Z-scoreSeq. Identity (%)ViewDock