****************** ASPREG ******************                                                                                       
                                                                                                                                    
 Search code = AUTO.PAT                                                                                                             
 Depsilon=      2.00 A  Minclq=    3  Modhe=   0    0.00                                                                            
                                                                                                                                    
???? was source of search pattern AUTO                                                                                              
 Pattern size=     3          111111                                                                                                
   SS       EE        DISTANCES USED    maximum dist=   999.00000                                                                   
 
                                                                                                                                    
 
KERBm  3*FOUND in 5b2o  size =    3  ^    CRISPR-ASSOCIATED ENDONUCLEASE CAS9;                    #    1                            
  RMSD =     0.72 A
  TRANSFORM    0.7826 -0.5177 -0.3457  0.0425  0.5985 -0.8000 -0.6210 -0.6114 -0.4904    59.386   -12.473     6.820              
         T  <A  34   THR    > matches  <A1395   THR    >                        ( 12.4 A from    O1  EDO A1723  )
         K  <A  60   LYS    > matches  <A1399   LYS    >                        ( 17.1 A from    O1  EDO A1723  )
         E  <A 124   GLU    > matches  <A1260   GLU    >                        ( 16.4 A from    C1  EDO A1723  )
 
KERBm  3*FOUND in 1x82  size =    3  ^    GLUCOSE-6-PHOSPHATE ISOMERASE;                          #    2                            
  RMSD =     0.72 A
  TRANSFORM    0.2907  0.8406  0.4570 -0.8690  0.4319 -0.2416  0.4004  0.3269 -0.8560     6.580     2.716    28.288              
         T  <A  34   THR    > matches  <A 162   THR    >                        ( 12.6 A from    O2P PA5 A 301  )
         K  <A  60   LYS    > matches  <A 166   LYS    >                        ( 16.0 A from    O2P PA5 A 301  )
         E  <A 124   GLU    > matches  <A  61   GLU    >                        ( 15.8 A from    O1A PA5 A 301  )
 
KERBm  3*FOUND in 3pqs  size =    3  ^    TRANSFERRIN-BINDING PROTEIN;                            #    2                            
  RMSD =     0.74 A
  TRANSFORM   -0.7614  0.1203 -0.6370  0.4180  0.8421 -0.3407 -0.4954  0.5257  0.6915    63.571     2.989    25.159              
         T  <A  34   THR    > matches  <A 462   THR    >                        (  7.5 A from    C1  GOL A 529  )
         K  <A  60   LYS    > matches  <A 457   LYS    >                        ( 13.2 A from    C1  GOL A 529  )
         E  <A 124   GLU    > matches  <A 307   GLU    >                        (  9.2 A from    O1  GOL A 540  )
 
KERBm  3*FOUND in 5a67  size =    3  ^    TRIPHOSPHATE TUNEL METALLOENZYME 3;                     #    1                            
  RMSD =     0.75 A
  TRANSFORM   -0.6044 -0.5600 -0.5667  0.7238 -0.0888 -0.6842 -0.3328  0.8237 -0.4590    11.408     1.648     6.852              
         T  <A  34   THR    > matches  <A  39   THR    >                        ( 20.0 A from    O1G 3PO A1000  )
         K  <A  60   LYS    > matches  <A  41   LYS    >                        ( 23.6 A from    O1G 3PO A1000  )
         E  <A 124   GLU    > matches  <A  93   GLU    >                        ( 15.7 A from    O5' 3PO A1000  )
 
KERBm  3*FOUND in 2fb6  size =    3  ^    CONSERVED HYPOTHETICAL PROTEIN;                         #    1                            
  RMSD =     0.76 A
  TRANSFORM   -0.3489  0.7974  0.4923  0.6680  0.5801 -0.4662  0.6573 -0.1662  0.7351    26.835   -11.345     5.108              
         T  <A  34   THR    > matches  <A 102   THR    > 
         K  <A  60   LYS    > matches  <A 106   LYS    > 
         E  <A 124   GLU    > matches  <A  79   GLU    > 
 
KERBm  3*FOUND in 4g8a  size =    3  ^    TOLL-LIKE RECEPTOR 4;                                   #    1                            
  RMSD =     0.76 A
  TRANSFORM   -0.1398  0.9898  0.0281 -0.9720 -0.1426  0.1869 -0.1890  0.0011 -0.9820    33.345   -19.100   -68.291              
         T  <A  34   THR    > matches  <A 175   THR    >                        (  9.3 A from    C1  NAG A 701  )
         K  <A  60   LYS    > matches  <A 150   LYS    >                        (  5.5 A from    O6  NAG A 701  )
         E  <A 124   GLU    > matches  <A 225   GLU    >                        ( 23.4 A from    C8  NAG A 701  )
 
KERBm  3*FOUND in 2ix5  size =    3  ^    ACYL-COENZYME A OXIDASE 4, PEROXISOMAL;                 #    1                            
  RMSD =     0.76 A
  TRANSFORM    0.5877  0.2520  0.7689  0.7840 -0.4122 -0.4642 -0.2000 -0.8756  0.4398    20.737   -27.797    11.371              
         T  <A  34   THR    > matches  <A 116   THR    >                        ( 22.3 A from    O5P CAA A1432  )
         K  <A  60   LYS    > matches  <A 349   LYS    >                        ( 24.8 A from    O5P CAA A1432  )
         E  <A 124   GLU    > matches  <A  71   GLU    >                        ( 25.3 A from    C7M FAD A1433  )
 
KERBm  3*FOUND in 3ghg  size =    3  ^    FIBRINOGEN ALPHA CHAIN;                                 #    1                            
  RMSD =     0.77 A
  TRANSFORM   -0.5790  0.8142 -0.0436  0.4118  0.3381  0.8462 -0.7037 -0.4720  0.5310   -40.938    40.622   -59.754              
         T  <A  34   THR    > matches  <B 280   THR    >                        ( 43.8 A from   CA    CA B 501  )
         K  <A  60   LYS    > matches  <B 283   LYS    >                        ( 49.7 A from   CA    CA B 501  )
         E  <A 124   GLU    > matches  <B 313   GLU    >                        ( 31.9 A from    O6  NAG B 470  )
 
KERBm  3*FOUND in 1v9m  size =    3  ^    V-TYPE ATP SYNTHASE SUBUNIT C;                          #    1                            
  RMSD =     0.78 A
  TRANSFORM    0.7236 -0.6659  0.1816  0.6801  0.7328 -0.0225  0.1181 -0.1398 -0.9831    19.120   -21.215    38.239              
         T  <A  34   THR    > matches  <A  64   THR    >                        ( 12.8 A from    O2  GOL A1001  )
         K  <A  60   LYS    > matches  <A  67   LYS    >                        ( 15.2 A from    O3  GOL A1001  )
         E  <A 124   GLU    > matches  <A  27   GLU    >                        ( 13.8 A from    O2  GOL A1001  )
 
KERBm  3*FOUND in 1rlz  size =    3  ^    DEOXYHYPUSINE SYNTHASE;                                 #    1                            
  RMSD =     0.85 A
  TRANSFORM    0.7735 -0.4319  0.4639  0.6257  0.4031 -0.6679 -0.1014 -0.8068 -0.5820   -17.945     5.305    52.850              
         T  <A  34   THR    > matches  <A 146   THR    >                        (  8.9 A from    O7N NAD A 700  )
         K  <A  60   LYS    > matches  <A 141   LYS    >                        (  9.7 A from    O7N NAD A 700  )
         E  <A 124   GLU    > matches  <A 157   GLU    >                        ( 21.3 A from    O7N NAD A 700  )
 
KERBm  3*FOUND in 4qft  size =    3  ^    COP9 SIGNALOSOME COMPLEX SUBUNIT 6;                     #    1                            
  RMSD =     0.85 A
  TRANSFORM    0.7638 -0.1893 -0.6171 -0.6454 -0.2308 -0.7281  0.0046 -0.9544  0.2985    48.948     2.524    92.713              
         T  <A  34   THR    > matches  <A 126   THR    > 
         K  <A  60   LYS    > matches  <A 153   LYS    > 
         E  <A 124   GLU    > matches  <A 103   GLU    > 
 
KERBm  3*FOUND in 4cyf  size =    3  ^    PANTETHEINASE;                                          #    3                            
  RMSD =     0.85 A
  TRANSFORM   -0.4310 -0.8766  0.2141 -0.8521  0.4735  0.2229  0.2967  0.0864  0.9510   338.801   -67.766   -99.977              
         T  <A  34   THR    > matches  <A 343   THR    >                        ( 21.0 A from    C1  NAG A 604  )
         K  <A  60   LYS    > matches  <A 334   LYS    >                        ( 25.5 A from    C1  NAG A 604  )
         E  <A 124   GLU    > matches  <A 324   GLU    >                        ( 11.9 A from    O7  NAG A 604  )
 
KERBm  3*FOUND in 3s9j  size =    3  ^    MEMBER OF DUF4221 FAMILY;                               #    1                            
  RMSD =     0.85 A
  TRANSFORM    0.2442 -0.4691 -0.8487 -0.4791  0.7026 -0.5261 -0.8431 -0.5351  0.0532    42.962     1.657    71.401              
         T  <A  34   THR    > matches  <A 323   THR    >                        ( -4.1 A from    C3  GOL A 417s )
         K  <A  60   LYS    > matches  <A 327   LYS    >                        (  7.8 A from    C   FMT A 405  )
         E  <A 124   GLU    > matches  <A  70   GLU    >                        ( 11.5 A from   NA    NA A 402  )
 
KERBm  3*FOUND in 4het  size =    3  ^    HYPOTHETICAL GLYCOSIDE HYDROLASE;                       #    1                            
  RMSD =     0.85 A
  TRANSFORM   -0.0784 -0.7900  0.6081 -0.9899 -0.0104 -0.1412 -0.1179  0.6131  0.7812   -63.653    63.141    29.461              
         T  <A  34   THR    > matches  <A 125   THR    >                        ( 23.5 A from    C1  EDO A 401  )
         K  <A  60   LYS    > matches  <A 154   LYS    >                        ( 25.4 A from    C1  EDO A 401  )
         E  <A 124   GLU    > matches  <A 323   GLU    >                        ( 28.8 A from    O1  EDO A 401  )
 
KERBm  3*FOUND in 5mkk  size =    3  ^    MULTIDRUG RESISTANCE ABC TRANSPORTER ATP-BINDING AN     #    1                            
  RMSD =     0.86 A
  TRANSFORM    0.4505  0.8712 -0.1952 -0.5137  0.4318  0.7414 -0.7301  0.2338 -0.6421   -33.558   -28.639    13.292              
         T  <A  34   THR    > matches  <A 499   THR    >                        ( 15.9 A from    O1  SO4 A 701  )
         K  <A  60   LYS    > matches  <A 502   LYS    >                        ( 19.1 A from    O1  SO4 A 701  )
         E  <A 124   GLU    > matches  <A 599   GLU    >                        ( 10.0 A from    O4  SO4 B 601  )
 
KERBm  3*FOUND in 2v84  size =    3  ^    SPERMIDINE/PUTRESCINE ABC TRANSPORTER, PERIPLASMIC      #    1                            
  RMSD =     0.87 A
  TRANSFORM    0.6743 -0.5942 -0.4384 -0.0365  0.5661 -0.8235 -0.7375 -0.5714 -0.3600    30.449   -28.837     8.327              
         T  <A  34   THR    > matches  <A  20   THR    >                        ( 12.8 A from   CL    CL A1331  )
         K  <A  60   LYS    > matches  <A  24   LYS    >                        ( 18.9 A from   CL    CL A1331  )
         E  <A 124   GLU    > matches  <A 216   GLU    >                        (  7.9 A from   CL    CL A1331  )
 
KERBm  3*FOUND in 3g2b  size =    3  ^    COENZYME PQQ SYNTHESIS PROTEIN D;                       #    1                            
  RMSD =     0.87 A
  TRANSFORM    0.6308  0.1718 -0.7567  0.7746 -0.1980  0.6007  0.0466  0.9650  0.2579    50.883   -17.593   -10.331              
         T  <A  34   THR    > matches  <A  83   THR    >                        (  8.6 A from    O2  PO4 A 210  )
         K  <A  60   LYS    > matches  <A  87   LYS    >                        ( -2.7 A from    O2  PO4 A 210s )
         E  <A 124   GLU    > matches  <A  72   GLU    >                        ( 27.8 A from    O2  PO4 A 210  )
 
KERBm  3*FOUND in 2oze  size =    3  ^    ORF DELTA';                                             #    2                            
  RMSD =     0.88 A
  TRANSFORM   -0.4763 -0.1234 -0.8706  0.2021  0.9482 -0.2450 -0.8558  0.2926  0.4267    50.694   -38.598    37.320              
         T  <A  34   THR    > matches  <A  78   THR    >                        (  4.7 A from    O1A AGS A 300  )
         K  <A  60   LYS    > matches  <A  81   LYS    >                        (  9.8 A from    O1A AGS A 300  )
         E  <A 124   GLU    > matches  <A 189   GLU    >                        ( 10.9 A from    S1G AGS A 300  )
 
KERBm  3*FOUND in 3ti2  size =    3  ^    3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE;           #    1                            
  RMSD =     0.88 A
  TRANSFORM   -0.3554 -0.4460  0.8215 -0.8334  0.5491 -0.0624  0.4233  0.7068  0.5668    35.185    18.597     4.703              
         T  <A  34   THR    > matches  <A 189   THR    >                        ( 20.3 A from   CL    CL A   1  )
         K  <A  60   LYS    > matches  <A 187   LYS    >                        ( 25.0 A from   CL    CL A   1  )
         E  <A 124   GLU    > matches  <A 195   GLU    >                        ( 19.2 A from   CL    CL A   1  )
 
KERBm  3*FOUND in 3hx4  size =    3  ^    CALMODULIN-DOMAIN PROTEIN KINASE 1;                     #    2                            
  RMSD =     0.88 A
  TRANSFORM    0.2041 -0.9352 -0.2893  0.4107  0.3500 -0.8419 -0.8886 -0.0530 -0.4556    83.998    23.524    34.105              
         T  <A  34   THR    > matches  <A 132   THR    >                        ( -3.4 A from    O1  SO4 A 610s )
         K  <A  60   LYS    > matches  <A 185   LYS    >                        ( -3.7 A from    O4  SO4 A 610s )
         E  <A 124   GLU    > matches  <A 116   GLU    >                        ( 14.7 A from    N6  ANP A 605  )
 
KERBm  3*FOUND in 3w7t  size =    3  ^    UNCHARACTERIZED PROTEIN YGJK;                           #    2                            
  RMSD =     0.88 A
  TRANSFORM    0.3531 -0.5510  0.7561  0.7488  0.6509  0.1246  0.5609 -0.5222 -0.6424    10.008   -10.980    53.047              
         T  <A  34   THR    > matches  <A 733   THR    >                        ( 20.6 A from    O2  BMA A1003  )
         K  <A  60   LYS    > matches  <A 717   LYS    >                        ( 22.6 A from    O2  BMA A1003  )
         E  <A 124   GLU    > matches  <A 512   GLU    >                        ( 25.8 A from    O2  BMA A1003  )
 
KERBm  3*FOUND in 4qrk  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     0.89 A
  TRANSFORM    0.9629  0.1347  0.2338  0.2166  0.1313 -0.9674  0.1610 -0.9821 -0.0972     0.129     6.469    25.921              
         T  <A  34   THR    > matches  <A 186   THR    >                        ( 20.6 A from    O   ACT A 301  )
         K  <A  60   LYS    > matches  <A 245   LYS    >                        ( 24.7 A from    O   ACT A 301  )
         E  <A 124   GLU    > matches  <A 119   GLU    >                        ( 26.7 A from    OXT ACT A 301  )
 
KERBm  3*FOUND in 1oi7  size =    3  ^    SUCCINYL-COA SYNTHETASE ALPHA CHAIN;                    #    3                            
  RMSD =     0.89 A
  TRANSFORM   -0.7468 -0.3063 -0.5903 -0.1358  0.9391 -0.3156 -0.6511  0.1556  0.7429    64.938   -16.651     7.993              
         T  <A  34   THR    > matches  <A 172   THR    > 
         K  <A  60   LYS    > matches  <A   1+  LYS    > 
         E  <A 124   GLU    > matches  <A 281   GLU    > 
 
KERBm  3*FOUND in 3iuo  size =    3  ^    ATP-DEPENDENT DNA HELICASE RECQ;                        #    1                            
  RMSD =     0.89 A
  TRANSFORM    0.1457  0.2549 -0.9559 -0.7299  0.6800  0.0701 -0.6679 -0.6875 -0.2851    63.808    -3.019    46.217              
         T  <A  34   THR    > matches  <A 658   THR    >                        ( 25.4 A from   NA    NA A   1  )
         K  <A  60   LYS    > matches  <A 625   LYS    >                        ( 29.8 A from   NA    NA A   1  )
         E  <A 124   GLU    > matches  <A 697   GLU    >                        ( 20.4 A from   NA    NA A   1  )
 
KERBm  3*FOUND in 3k3o  size =    3  ^    PHD FINGER PROTEIN 8;                                   #    1                            
  RMSD =     0.89 A
  TRANSFORM    0.8587 -0.0739  0.5071 -0.5022  0.0759  0.8614  0.1022  0.9944 -0.0281    54.311     2.110    25.003              
         T  <A  34   THR    > matches  <A 206   THR    >                        ( 15.7 A from    O1  AKG A 456  )
         K  <A  60   LYS    > matches  <A 233   LYS    >                        ( 17.9 A from    O1  AKG A 456  )
         E  <A 124   GLU    > matches  <A 114   GLU    >                        ( 27.2 A from   FE   FE2 A   1  )
 
KERBm  3*FOUND in 1lf7  size =    3  ^    COMPLEMENT PROTEIN C8GAMMA;                             #    1                            
  RMSD =     0.90 A
  TRANSFORM   -0.1618 -0.9447  0.2854  0.9787 -0.1165  0.1693  0.1267 -0.3067 -0.9434    52.280   -24.297    46.644              
         T  <A  34   THR    > matches  <A 110   THR    >                        ( 16.2 A from    O1  CIT A 200  )
         K  <A  60   LYS    > matches  <A  19   LYS    >                        ( 21.2 A from    O1  CIT A 200  )
         E  <A 124   GLU    > matches  <A 169   GLU    >                        ( 15.4 A from    O2  CIT A 200  )
 
KERBm  3*FOUND in 4h2g  size =    3  ^    5'-NUCLEOTIDASE;                                        #    1                            
  RMSD =     0.91 A
  TRANSFORM   -0.3099 -0.9177  0.2485  0.0440 -0.2749 -0.9605 -0.9498  0.2867 -0.1256    40.908    35.795    47.550              
         T  <A  34   THR    > matches  <A 430   THR    >                        ( 18.8 A from    O2' ADN A 603  )
         K  <A  60   LYS    > matches  <A 433   LYS    >                        ( 20.8 A from    O2' ADN A 603  )
         E  <A 124   GLU    > matches  <A 180   GLU    >                        (  9.0 A from   CL    CL A 605  )
 
KERBm  3*FOUND in 3cx3  size =    3  ^    LIPOPROTEIN;                                            #    1                            
  RMSD =     0.91 A
  TRANSFORM    0.4732  0.0854 -0.8768  0.6106  0.6857  0.3962 -0.6351  0.7228 -0.2724    58.668   -62.267    40.685              
         T  <A  34   THR    > matches  <A 148   THR    >                        ( 11.5 A from   ZN    ZN A 314  )
         K  <A  60   LYS    > matches  <A 154   LYS    >                        ( 16.1 A from   ZN    ZN A 314  )
         E  <A 124   GLU    > matches  <A  74   GLU    >                        ( 14.7 A from   ZN    ZN A 314  )
 
KERBm  3*FOUND in 3p8c  size =    3  ^    CYTOPLASMIC FMR1-INTERACTING PROTEIN 1;                 #    6                            
  RMSD =     0.91 A
  TRANSFORM    0.1201 -0.9138  0.3881  0.7343  0.3449  0.5847  0.6681 -0.2147 -0.7124   -47.772   -89.788    77.172              
         T  <A  34   THR    > matches  <B 247   THR    >                        ( 30.7 A from   CL    CL B1131  )
         K  <A  60   LYS    > matches  <B 514   LYS    >                        ( 35.2 A from    O1  TRS A1254  )
         E  <A 124   GLU    > matches  <B 381   GLU    >                        ( 10.2 A from   CL    CL B1131  )
 
KERBm  3*FOUND in 3spc  size =    3  ^    INWARD-RECTIFIER K+ CHANNEL KIR2.2;                     #    1                            
  RMSD =     0.91 A
  TRANSFORM   -0.5454  0.0208 -0.8379 -0.7274  0.4850  0.4855 -0.4165 -0.8743  0.2494    88.724   -35.113     4.292              
         T  <A  34   THR    > matches  <A  72   THR    >                        ( 15.7 A from    O23 P8P A 379  )
         K  <A  60   LYS    > matches  <A  69+  LYS    >                        ( 17.6 A from    O23 P8P A 379  )
         E  <A 124   GLU    > matches  <A 300   GLU    >                        ( 10.9 A from    K     K A 508  )
 
KERBm  3*FOUND in 2w0r  size =    3  ^    YSCU;                                                   #    1                            
  RMSD =     0.91 A
  TRANSFORM    0.4952 -0.4435 -0.7470  0.7206  0.6900  0.0680 -0.4853  0.5720 -0.6613    14.398    -5.076    37.637              
         T  <A  34   THR    > matches  <A 294   THR    >                        ( 30.0 A from   CL    CL A1344  )
         K  <A  60   LYS    > matches  <A 297   LYS    >                        ( 31.4 A from   CL    CL A1345  )
         E  <A 124   GLU    > matches  <A 244   GLU    >                        ( 22.8 A from   CL    CL A1344  )
 
KERBm  3*FOUND in 3etu  size =    3  ^    PROTEIN TRANSPORT PROTEIN DSL1;                         #    1                            
  RMSD =     0.91 A
  TRANSFORM    0.5458 -0.8354  0.0649 -0.7994 -0.4959  0.3391  0.2511  0.2370  0.9385    -9.308    64.096    -3.080              
         T  <A  34   THR    > matches  <A 285   THR    > 
         K  <A  60   LYS    > matches  <A 289   LYS    > 
         E  <A 124   GLU    > matches  <A 275   GLU    > 
 
KERBm  3*FOUND in 3kvq  size =    3  ^    VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2;          #    1                            
  RMSD =     0.91 A
  TRANSFORM   -0.9604 -0.1793  0.2133 -0.2785  0.6485 -0.7085  0.0113  0.7398  0.6727    34.112     2.688   -23.715              
         T  <A  34   THR    > matches  <A 723   THR    > 
         K  <A  60   LYS    > matches  <A 716   LYS    > 
         E  <A 124   GLU    > matches  <A 755   GLU    > 
 
KERBm  3*FOUND in 4inw  size =    3  ^    PHEROMONE-BINDING PROTEIN 1;                            #    1                            
  RMSD =     0.91 A
  TRANSFORM   -0.6407  0.5774  0.5061 -0.3625  0.3536 -0.8623  0.6768  0.7359  0.0172    44.218    18.576    -4.615              
         T  <A  34   THR    > matches  <A  18   THR    >                        ( 16.3 A from    CAK 1EY A 201  )
         K  <A  60   LYS    > matches  <A  21   LYS    >                        ( 20.5 A from    CAK 1EY A 201  )
         E  <A 124   GLU    > matches  <A  75   GLU    >                        ( 12.5 A from    CAA 1EY A 201  )
 
KERBm  3*FOUND in 2vgl  size =    3  ^    ADAPTOR PROTEIN COMPLEX AP-2, ALPHA 2 SUBUNIT;          #    3                            
  RMSD =     0.92 A
  TRANSFORM   -0.4460 -0.8548  0.2653  0.8736 -0.4803 -0.0790 -0.1949 -0.1965 -0.9609    46.316   -25.631    68.903              
         T  <A  34   THR    > matches  <B 486   THR    >                        ( 87.7 A from    O35 IHP A1609  )
         K  <A  60   LYS    > matches  <B 490   LYS    >                        ( 89.0 A from    O35 IHP A1609  )
         E  <A 124   GLU    > matches  <A 459   GLU    >                        ( 73.1 A from    O45 IHP A1609  )
 
KERBm  3*FOUND in 5y9e  size =    3  ^    MAJOR CAPSID PROTEIN L1;                                #    1                            
  RMSD =     0.93 A
  TRANSFORM    0.2457  0.6959 -0.6748 -0.8143  0.5259  0.2459 -0.5260 -0.4891 -0.6958    41.363    24.982    71.183              
         T  <A  34   THR    > matches  <A 166   THR    >                        ( 18.0 A from    O2  GOL A 504  )
         K  <A  60   LYS    > matches  <A 236   LYS    >                        ( 20.2 A from    O1  GOL A 504  )
         E  <A 124   GLU    > matches  <A 447   GLU    >                        ( 17.7 A from    O3  GOL A 501  )
 
KERBm  3*FOUND in 2flh  size =    3  ^    CYTOKININ-SPECIFIC BINDING PROTEIN;                     #    3                            
  RMSD =     0.94 A
  TRANSFORM    0.1399 -0.2904 -0.9466 -0.9901 -0.0271 -0.1380 -0.0144 -0.9565  0.2913    17.847    23.921     2.543              
         T  <A  34   THR    > matches  <A 101   THR    >                        ( 10.6 A from    C14 ZEA A 701  )
         K  <A  60   LYS    > matches  <A 117   LYS    >                        ( 15.6 A from    N7  ZEA A 701  )
         E  <A 124   GLU    > matches  <A  45   GLU    >                        ( 11.7 A from    C15 ZEA A 708  )
 
KERBm  3*FOUND in 2pq8  size =    3  ^    PROBABLE HISTONE ACETYLTRANSFERASE MYST1;               #    1                            
  RMSD =     0.94 A
  TRANSFORM    0.7790 -0.4377 -0.4489 -0.5459 -0.8258 -0.1420  0.3085 -0.3557  0.8822    34.673    24.392     3.033              
         T  <A  34   THR    > matches  <A 437   THR    >                        ( 11.0 A from    O1A COA A 601  )
         K  <A  60   LYS    > matches  <A 433   LYS    >                        ( 13.7 A from    O8A COA A 601  )
         E  <A 124   GLU    > matches  <A 250   GLU    >                        ( -5.0 A from    UNK UNX A 707s )
 
KERBm  3*FOUND in 2fhf  size =    3  ^    PULLULANASE;                                            #    1                            
  RMSD =     0.94 A
  TRANSFORM    0.2118  0.5899  0.7792  0.6080  0.5447 -0.5776  0.7651 -0.5961  0.2433   -67.389    47.793   -12.232              
         T  <A  34   THR    > matches  <A 185   THR    >                        ( 26.0 A from   CA    CA A2403  )
         K  <A  60   LYS    > matches  <A 246   LYS    >                        ( 28.9 A from   CA    CA A2403  )
         E  <A 124   GLU    > matches  <A 293   GLU    >                        ( 23.5 A from   CA    CA A2403  )
 
KERBm  3*FOUND in 3teb  size =    3  ^    ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE;                   #    2                            
  RMSD =     0.95 A
  TRANSFORM   -0.1998  0.5341 -0.8215 -0.9650  0.0382  0.2595 -0.1700 -0.8445 -0.5078    15.211    49.072    72.967              
         T  <A  34   THR    > matches  <A  65   THR    >                        ( 21.2 A from   MG    MG A 301  )
         K  <A  60   LYS    > matches  <A  68   LYS    >                        ( 25.5 A from   MG    MG A 301  )
         E  <A 124   GLU    > matches  <A  39   GLU    >                        ( -2.1 A from   MG    MG A 301s )
 
KERBm  3*FOUND in 3mzo  size =    3  ^    LIN2634 PROTEIN;                                        #    1                            
  RMSD =     0.95 A
  TRANSFORM    0.8358  0.5190  0.1790 -0.0018  0.3286 -0.9445  0.5490 -0.7891 -0.2756   -29.018   -20.225    78.524              
         T  <A  34   THR    > matches  <A  79   THR    >                        (  8.7 A from    O1  PEG A 313  )
         K  <A  60   LYS    > matches  <A  82   LYS    >                        ( 13.7 A from    O1  PEG A 313  )
         E  <A 124   GLU    > matches  <A  32   GLU    >                        (  4.2 A from   CA    CA A 304  )
 
KERBm  3*FOUND in 1twf  size =    3  ^    DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT;         #    6                            
  RMSD =     0.95 A
  TRANSFORM   -0.3223  0.3971 -0.8593 -0.4168  0.7556  0.5054 -0.8500 -0.5210  0.0780    40.457   -41.940    98.469              
         T  <A  34   THR    > matches  <A 375   THR    >                        ( 30.6 A from   MN    MN A3009  )
         K  <A  60   LYS    > matches  <A 403   LYS    >                        ( 29.8 A from   MN    MN A3009  )
         E  <A 124   GLU    > matches  <A 500   GLU    >                        ( 31.1 A from    O4  UTP B3571  )
 
KERBm  3*FOUND in 5cxx  size =    3  ^    FERULIC ACID ESTERASE, AMCE1/FAE1A;                     #    1                            
  RMSD =     0.96 A
  TRANSFORM    0.1496  0.6728 -0.7246  0.1306 -0.7399 -0.6600  0.9801 -0.0041  0.1985     7.934    23.974   -97.390              
         T  <A  34   THR    > matches  <A  83   THR    >                        ( 14.3 A from    O2  GOL A 306  )
         K  <A  60   LYS    > matches  <A  87   LYS    >                        ( 19.3 A from    O2  GOL A 306  )
         E  <A 124   GLU    > matches  <A  74   GLU    >                        ( -4.5 A from    O1  GOL A 306s )
 
KERBm  3*FOUND in 5xf7  size =    3  ^    PROTEIN DISULFIDE-ISOMERASE-LIKE PROTEIN OF THE TES     #    3                            
  RMSD =     0.96 A
  TRANSFORM   -0.6114  0.2171  0.7610  0.7064  0.5832  0.4011  0.3568 -0.7828  0.5099    33.933   -42.352    25.928              
         T  <A  34   THR    > matches  <A 263   THR    > 
         K  <A  60   LYS    > matches  <A 266   LYS    > 
         E  <A 124   GLU    > matches  <A  81   GLU    > 
 
KERBm  3*FOUND in 3jys  size =    3  ^    SUSD SUPERFAMILY PROTEIN;                               #    1                            
  RMSD =     0.96 A
  TRANSFORM   -0.5251  0.7520  0.3985  0.6577  0.0614  0.7508 -0.5401 -0.6563  0.5268   -14.847  -156.521    -3.546              
         T  <A  34   THR    > matches  <A 333   THR    >                        ( 28.2 A from   MG    MG A   1  )
         K  <A  60   LYS    > matches  <A  97   LYS    >                        ( 28.5 A from   MG    MG A   1  )
         E  <A 124   GLU    > matches  <A 346   GLU    >                        ( 40.8 A from   MG    MG A   1  )
 
KERBm  3*FOUND in 4fvm  size =    3  ^    DNA POLYMERASE ALPHA CATALYTIC SUBUNIT A;               #    1                            
  RMSD =     0.96 A
  TRANSFORM    0.2161  0.7973 -0.5635 -0.8508 -0.1293 -0.5093  0.4789 -0.5895 -0.6504    32.106   -15.187    14.957              
         T  <A  34   THR    > matches  <A1064   THR    >                        (  0.8 A from    CB  THR A1064  )
         K  <A  60   LYS    > matches  <A1039   LYS    >                        (  0.0 A from    NZ  LYS A1039  )
         E  <A 124   GLU    > matches  <A 727   GLU    >                        (  0.6 A from    CD  GLU A 727  )
 
KERBm  3*FOUND in 3kv4  size =    3  ^    PHD FINGER PROTEIN 8;                                   #    1                            
  RMSD =     0.97 A
  TRANSFORM   -0.7281 -0.1038 -0.6776 -0.3832 -0.7579  0.5279  0.5684 -0.6440 -0.5121    23.250   -28.660    58.453              
         T  <A  34   THR    > matches  <A 206   THR    >                        (  9.8 A from   NI    NI A 451  )
         K  <A  60   LYS    > matches  <A 233   LYS    >                        ( 13.3 A from    CH1 MLY B   9  )
         E  <A 124   GLU    > matches  <A 114   GLU    >                        (  7.4 A from    O2  EDO A 456  )
 
KERBm  3*FOUND in 4mll  size =    3  ^    BETA-LACTAMASE OXA-1;                                   #    1                            
  RMSD =     0.97 A
  TRANSFORM   -0.9056  0.1223 -0.4060 -0.2661  0.5815  0.7688 -0.3302 -0.8043  0.4941    36.004   -36.288    37.394              
         T  <A  34   THR    > matches  <A 213   THR    >                        ( -3.6 A from    OAE 1S6 A 301s )
         K  <A  60   LYS    > matches  <A 262   LYS    >                        (  9.1 A from    OAE 1S6 A 301  )
         E  <A 124   GLU    > matches  <A 158   GLU    >                        (  7.8 A from    CAA 1S6 A 301  )
 
KERBm  3*FOUND in 3c96  size =    3  ^    FLAVIN-CONTAINING MONOOXYGENASE;                        #    1                            
  RMSD =     0.97 A
  TRANSFORM    0.3999 -0.8964 -0.1912  0.7000  0.1641  0.6950  0.5916  0.4117 -0.6931    38.851    18.794   -11.715              
         T  <A  34   THR    > matches  <A  32   THR    >                        ( 12.0 A from    C2A FAD A 501  )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        ( 17.1 A from    C2A FAD A 501  )
         E  <A 124   GLU    > matches  <A  39   GLU    >                        ( 11.1 A from    O2B FAD A 501  )
 
KERBm  3*FOUND in 3qt5  size =    3  ^    MEVALONATE DIPHOSPHATE DECARBOXYLASE;                   #    1                            
  RMSD =     0.98 A
  TRANSFORM    0.2133  0.8990  0.3825  0.0545  0.3799 -0.9234  0.9755 -0.2178 -0.0320    37.648    14.350    46.545              
         T  <A  34   THR    > matches  <A 281   THR    > 
         K  <A  60   LYS    > matches  <A 289   LYS    > 
         E  <A 124   GLU    > matches  <A 215   GLU    > 
 
KERBm  3*FOUND in 3kal  size =    3  ^    HOMOGLUTATHIONE SYNTHETASE;                             #    2                            
  RMSD =     0.98 A
  TRANSFORM    0.5010  0.1473 -0.8528 -0.4758  0.8700 -0.1292 -0.7229 -0.4705 -0.5060    25.635    13.809    -1.847              
         T  <A  34   THR    > matches  <A 406   THR    >                        ( 15.3 A from    O4' ADP A 500  )
         K  <A  60   LYS    > matches  <A 409   LYS    >                        ( 19.2 A from    O2B ADP A 500  )
         E  <A 124   GLU    > matches  <A 169   GLU    >                        ( -1.9 A from   MG    MG A 502s )
 
KERBm  3*FOUND in 4m6t  size =    3  ^    RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG, LINK     #    1                            
  RMSD =     0.98 A
  TRANSFORM   -0.6441 -0.0569 -0.7628 -0.7092 -0.3293  0.6234  0.2866 -0.9425 -0.1717     1.041   -12.350    43.264              
         T  <A  34   THR    > matches  <A  72   THR    >                        ( 19.9 A from    N   SAM A 201  )
         K  <A  60   LYS    > matches  <A  70   LYS    >                        ( 26.0 A from    N   SAM A 201  )
         E  <A 124   GLU    > matches  <A  43   GLU    >                        ( -6.6 A from    CE  SAM A 201s )
 
KERBm  3*FOUND in 5ab0  size =    3  ^    ENDOPLASMATIC RETICULUM AMINOPEPTIDASE 2;               #    3                            
  RMSD =     0.98 A
  TRANSFORM    0.9418 -0.1803  0.2836  0.1429  0.9787  0.1475  0.3042  0.0984 -0.9475    -0.913    10.465    15.882              
         T  <A  34   THR    > matches  <A 939   THR    >                        (  9.7 A from    O7  NAG A1070  )
         K  <A  60   LYS    > matches  <A 943   LYS    >                        (  9.4 A from    C8  NAG A1070  )
         E  <A 124   GLU    > matches  <A 448   GLU    >                        ( 14.2 A from    C6  NAG A1070  )
 
KERBm  3*FOUND in 3s9d  size =    3  ^    INTERFERON ALPHA-2;                                     #    2                            
  RMSD =     0.98 A
  TRANSFORM    0.0285 -0.8871  0.4607 -0.7692 -0.3138 -0.5567 -0.6384  0.3385  0.6913     5.938    51.238   -21.682              
         T  <A  34   THR    > matches  <A 127   THR    > 
         K  <A  60   LYS    > matches  <A 131   LYS    > 
         E  <A 124   GLU    > matches  <A  42   GLU    > 
 
KERBm  3*FOUND in 4kg3  size =    3  ^    MRNA-DECAPPING ENZYME SUBUNIT 2;                        #    1                            
  RMSD =     0.98 A
  TRANSFORM    0.7317  0.5021 -0.4609  0.6701 -0.4061  0.6213 -0.1248  0.7635  0.6336    17.447   -73.562   -64.772              
         T  <A  34   THR    > matches  <A 213   THR    >                        ( 28.3 A from   MG    MG A 301  )
         K  <A  60   LYS    > matches  <A 216   LYS    >                        ( 34.0 A from   MG    MG A 301  )
         E  <A 124   GLU    > matches  <A 187   GLU    >                        ( 25.7 A from   MG    MG A 301  )
 
KERBm  3*FOUND in 2c0a  size =    3  ^    KHG/KDPG ALDOLASE;                                      #    1                            
  RMSD =     0.98 A
  TRANSFORM   -0.7594 -0.2126 -0.6149  0.1309  0.8758 -0.4646 -0.6373  0.4333  0.6373    64.088     7.124     3.305              
         T  <A  34   THR    > matches  <A 161   THR    >                        (  4.9 A from    O1  PO4 A1214  )
         K  <A  60   LYS    > matches  <A 133   LYS    >                        (  7.1 A from    O1  PO4 A1214  )
         E  <A 124   GLU    > matches  <A 206   GLU    >                        ( 16.2 A from    O2  PO4 A1214  )
 
KERBm  3*FOUND in 6cgm  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE;                   #    2                            
  RMSD =     0.99 A
  TRANSFORM    0.0628  0.2198 -0.9735 -0.5093 -0.8318 -0.2207  0.8583 -0.5097 -0.0597    53.286    11.523   -26.520              
         T  <A  34   THR    > matches  <A 555   THR    >                        ( 36.1 A from    O1  EDO A 803  )
         K  <A  60   LYS    > matches  <A 559   LYS    >                        ( 40.1 A from    O1  EDO A 803  )
         E  <A 124   GLU    > matches  <A 541   GLU    >                        ( 30.5 A from    O1  EDO A 802  )
 
KERBm  3*FOUND in 1epu  size =    3  ^    S-SEC1;                                                 #    1                            
  RMSD =     0.99 A
  TRANSFORM    0.0988  0.0732 -0.9924  0.1043 -0.9926 -0.0628  0.9896  0.0974  0.1057    60.856    37.245    -3.075              
         T  <A  34   THR    > matches  <A 481   THR    > 
         K  <A  60   LYS    > matches  <A 485   LYS    > 
         E  <A 124   GLU    > matches  <A 379   GLU    > 
 
KERBm  3*FOUND in 2gai  size =    3  ^    DNA TOPOISOMERASE I;                                    #    1                            
  RMSD =     1.00 A
  TRANSFORM   -0.7534  0.3037  0.5832  0.3178  0.9447 -0.0814  0.5756 -0.1240  0.8083   -22.364    -9.293   -66.696              
         T  <A  34   THR    > matches  <A 381   THR    > 
         K  <A  60   LYS    > matches  <A 232   LYS    > 
         E  <A 124   GLU    > matches  <A 413   GLU    > 
 
KERBm  3*FOUND in 4eco  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.00 A
  TRANSFORM   -0.1962 -0.6923 -0.6945 -0.0854  0.7176 -0.6912 -0.9768  0.0763  0.1999   123.089   -18.999   142.088              
         T  <A  34   THR    > matches  <A 535   THR    >                        ( 25.0 A from   NA    NA A1001  )
         K  <A  60   LYS    > matches  <A 538   LYS    >                        ( 29.4 A from   NA    NA A1001  )
         E  <A 124   GLU    > matches  <A 498   GLU    >                        ( 30.3 A from   NA    NA A1001  )
 
KERBm  3*FOUND in 1miw  size =    3  ^    TRNA CCA-ADDING ENZYME;                                 #    1                            
  RMSD =     1.00 A
  TRANSFORM   -0.8749 -0.1395  0.4638  0.1370 -0.9898 -0.0393 -0.4645 -0.0292 -0.8851     7.113    17.257    62.826              
         T  <A  34   THR    > matches  <A  81   THR    >                        (  8.5 A from    O4' ATP A5501  )
         K  <A  60   LYS    > matches  <A  84   LYS    >                        (  7.5 A from    N3  ATP A5501  )
         E  <A 124   GLU    > matches  <A   7   GLU    >                        (  8.4 A from   MG    MG A5611  )
 
KERBm  3*FOUND in 4trb  size =    3  ^    PURINE PHOSPHORIBOSYLTRANSFERASE (GPT-1);               #    1                            
  RMSD =     1.00 A
  TRANSFORM    0.0997  0.6550  0.7490  0.1002  0.7424 -0.6625  0.9900 -0.1411 -0.0084    -2.363   -30.127    60.242              
         T  <A  34   THR    > matches  <A 100   THR    >                        ( -4.0 A from    O3  PO4 A 302s )
         K  <A  60   LYS    > matches  <A 133   LYS    >                        (  8.3 A from    O2  PO4 A 302  )
         E  <A 124   GLU    > matches  <A 157   GLU    >                        (  6.6 A from    O2  PO4 A 301  )
 
KERBm  3*FOUND in 4doh  size =    3  ^    INTERLEUKIN-20;                                         #    1                            
  RMSD =     1.00 A
  TRANSFORM    0.8991  0.4252  0.1040 -0.2555  0.7026 -0.6641  0.3555 -0.5705 -0.7404     3.658    66.745    13.536              
         T  <A  34   THR    > matches  <E  68   THR    >                        ( 41.6 A from    O7  NAG E 301  )
         K  <A  60   LYS    > matches  <E  66   LYS    >                        ( 44.2 A from    O7  NAG E 301  )
         E  <A 124   GLU    > matches  <E 100   GLU    >                        ( 31.9 A from    O7  NAG E 301  )
 
KERBm  3*FOUND in 3n98  size =    3  ^    ALPHA-AMYLASE, GH57 FAMILY;                             #    3                            
  RMSD =     1.00 A
  TRANSFORM   -0.3200  0.8104  0.4908  0.2975 -0.4059  0.8642 -0.8995 -0.4225  0.1112    11.106    13.639     7.663              
         T  <A  34   THR    > matches  <A 167   THR    >                        ( 15.0 A from    C2' DIO A 569  )
         K  <A  60   LYS    > matches  <A 170   LYS    >                        ( 16.7 A from    C2' DIO A 569  )
         E  <A 124   GLU    > matches  <A 183   GLU    >                        ( -2.9 A from    O2  GOL A 568s )
 
KERBm  3*FOUND in 5wfo  size =    3  ^    GTPASE HRAS;                                            #    1                            
  RMSD =     1.00 A
  TRANSFORM   -0.3149 -0.2587  0.9132 -0.4193  0.9011  0.1107  0.8515  0.3481  0.3922    -5.468   -27.731   -24.433              
         T  <A  34   THR    > matches  <N 935   THR    >                        ( 19.4 A from    F15 5UU N1101  )
         K  <A  60   LYS    > matches  <N 939   LYS    >                        ( 21.0 A from    F15 5UU N1101  )
         E  <A 124   GLU    > matches  <N 792   GLU    >                        ( 15.8 A from    F15 5UU N1101  )
 
KERBm  3*FOUND in 5h3z  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    2                            
  RMSD =     1.00 A
  TRANSFORM    0.1512 -0.8876 -0.4352  0.8710 -0.0886  0.4833  0.4675  0.4521 -0.7596    91.452  -111.601    63.050              
         T  <A  34   THR    > matches  <A 377   THR    >                        ( 13.0 A from    O3  GOL A1202  )
         K  <A  60   LYS    > matches  <A 380   LYS    >                        ( 17.3 A from    O3  GOL A1202  )
         E  <A 124   GLU    > matches  <A 681   GLU    >                        ( 12.9 A from    O3  GOL A1202  )
 
KERBm  3*FOUND in 5mqn  size =    3  ^    GLYCOSYL HYDROLASES FAMILY 2, SUGAR BINDING DOMAIN;     #    3                            
  RMSD =     1.01 A
  TRANSFORM   -0.0896  0.9820 -0.1663  0.2424 -0.1404 -0.9600  0.9660  0.1263  0.2255     2.726    32.000   -14.464              
         T  <A  34   THR    > matches  <A 737   THR    >                        ( 25.3 A from   CA    CA A1201  )
         K  <A  60   LYS    > matches  <A 317   LYS    >                        ( 27.8 A from   CA    CA A1201  )
         E  <A 124   GLU    > matches  <A 604   GLU    >                        ( 18.5 A from   CA    CA A1201  )
 
KERBm  3*FOUND in 5zb9  size =    3  ^    DNA DAMAGE RESPONSE PROTEIN RTT109, PUTATIVE;           #    2                            
  RMSD =     1.01 A
  TRANSFORM    0.0497 -0.5816 -0.8119  0.7732 -0.4922  0.3999  0.6322  0.6477 -0.4253    89.253   -16.841   -53.770              
         T  <A  34   THR    > matches  <A 183   THR    >                        ( 23.9 A from    OH  ALY A 263  )
         K  <A  60   LYS    > matches  <A 188   LYS    >                        ( 27.1 A from    OH  ALY A 263  )
         E  <A 124   GLU    > matches  <A 178   GLU    >                        ( 23.3 A from    C1  GOL A 601  )
 
KERBm  3*FOUND in 5il2  size =    3  ^    METTL3;                                                 #    2                            
  RMSD =     1.01 A
  TRANSFORM   -0.2070  0.5758  0.7910 -0.9551 -0.2940 -0.0359 -0.2119  0.7629 -0.6108     9.705    10.751     1.166              
         T  <A  34   THR    > matches  <B 295   THR    >                        (  7.4 A from    O2  EDO B 501  )
         K  <A  60   LYS    > matches  <B 297   LYS    >                        ( -6.8 A from    O2  EDO B 503s )
         E  <A 124   GLU    > matches  <B 223   GLU    >                        ( 21.6 A from    O1  EDO B 501  )
 
KERBm  3*FOUND in 4xqk  size =    3  ^    LLABIII;                                                #    2                            
  RMSD =     1.01 A
  TRANSFORM    0.8479 -0.4879  0.2074  0.4782  0.8728  0.0983  0.2289 -0.0158 -0.9733    44.960   -73.729    98.569              
         T  <A  34   THR    > matches  <A 847   THR    >                        ( 24.0 A from    K     K A1602  )
         K  <A  60   LYS    > matches  <A 851   LYS    >                        ( 28.8 A from    K     K A1602  )
         E  <A 124   GLU    > matches  <A 963   GLU    >                        (  9.4 A from    K     K A1602  )
 
KERBm  3*FOUND in 1o12  size =    3  ^    N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE;            #    1                            
  RMSD =     1.01 A
  TRANSFORM    0.4306 -0.0901 -0.8980 -0.5469  0.7655 -0.3391 -0.7180 -0.6371 -0.2803   -14.524   -34.815    51.878              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 13.7 A from   FE    FE A 401  )
         K  <A  60   LYS    > matches  <A  89   LYS    >                        ( 16.4 A from   FE    FE A 401  )
         E  <A 124   GLU    > matches  <A 155   GLU    >                        ( 13.4 A from   FE    FE A 401  )
 
KERBm  3*FOUND in 4lhb  size =    3  ^    MOLYBDOPTERIN ADENYLYLTRANSFERASE;                      #    2                            
  RMSD =     1.01 A
  TRANSFORM   -0.4763 -0.2072 -0.8545  0.8004 -0.5046 -0.3237  0.3641  0.8381 -0.4062     8.321    41.511    25.981              
         T  <A  34   THR    > matches  <A 151   THR    >                        ( 12.6 A from    O4  SO4 A 201  )
         K  <A  60   LYS    > matches  <A 111   LYS    >                        ( 18.5 A from    O4  SO4 A 201  )
         E  <A 124   GLU    > matches  <A  31   GLU    >                        ( 17.3 A from    O2  SO4 A 201  )
 
KERBm  3*FOUND in 1yvr  size =    3  ^    60-KDA SS-A/RO RIBONUCLEOPROTEIN;                       #    3                            
  RMSD =     1.01 A
  TRANSFORM   -0.4754 -0.6237  0.6205 -0.8307  0.0859 -0.5501 -0.2898  0.7769  0.5589   -39.582    62.214   -30.022              
         T  <A  34   THR    > matches  <A 367   THR    > 
         K  <A  60   LYS    > matches  <A 369   LYS    > 
         E  <A 124   GLU    > matches  <A  83   GLU    > 
 
KERBm  3*FOUND in 3pz6  size =    3  ^    LEUCYL-TRNA SYNTHETASE;                                 #    1                            
  RMSD =     1.02 A
  TRANSFORM    0.5264 -0.8104 -0.2571 -0.7309 -0.2768 -0.6239 -0.4344 -0.5163  0.7380     1.006    71.084    29.741              
         T  <A  34   THR    > matches  <A 424   THR    > 
         K  <A  60   LYS    > matches  <A 426   LYS    > 
         E  <A 124   GLU    > matches  <A 453   GLU    > 
 
KERBm  3*FOUND in 5xh6  size =    3  ^    CRISPR-ASSOCIATED ENDONUCLEASE CPF1;                    #    1                            
  RMSD =     1.02 A
  TRANSFORM   -0.2952 -0.9551  0.0247  0.8389 -0.2468  0.4851  0.4573 -0.1639 -0.8741    34.044   -42.641   -20.305              
         T  <A  34   THR    > matches  <A 963   THR    >                        ( 14.8 A from    O2  EDO A1410  )
         K  <A  60   LYS    > matches  <A 965   LYS    >                        ( 11.6 A from    O2  EDO A1410  )
         E  <A 124   GLU    > matches  <A 462   GLU    >                        ( 29.7 A from    C2  EDO A1410  )
 
KERBm  3*FOUND in 4kv9  size =    3  ^    SEPTIN;                                                 #    1                            
  RMSD =     1.02 A
  TRANSFORM    0.1257  0.0809  0.9888  0.0041  0.9966 -0.0821  0.9921 -0.0143 -0.1249    13.239     9.160    45.570              
         T  <A  34   THR    > matches  <A 145   THR    >                        ( 21.0 A from    O1B GDP A 500  )
         K  <A  60   LYS    > matches  <A  95   LYS    >                        ( 17.5 A from    O1B GDP A 500  )
         E  <A 124   GLU    > matches  <A 304   GLU    >                        ( 32.0 A from    O3B GDP A 500  )
 
KERBm  3*FOUND in 3sxx  size =    3  ^    PEROXISOMAL PRIMARY AMINE OXIDASE;                      #    4                            
  RMSD =     1.02 A
  TRANSFORM   -0.9283 -0.1177  0.3528 -0.0257  0.9667  0.2547  0.3711 -0.2273  0.9004   -14.201    -9.830   -54.707              
         T  <A  34   THR    > matches  <A 665   THR    >                        ( 36.3 A from    O1 AGOL A 803  )
         K  <A  60   LYS    > matches  <A 669   LYS    >                        ( 42.3 A from    O1 AGOL A 803  )
         E  <A 124   GLU    > matches  <A 651   GLU    >                        ( 25.0 A from    O3  GOL A 807  )
 
KERBm  3*FOUND in 2a6h  size =    3  ^    DNA-DIRECTED RNA POLYMERASE ALPHA CHAIN;                #    8                            
  RMSD =     1.02 A
  TRANSFORM    0.6877 -0.5152 -0.5115  0.6185  0.7847  0.0412 -0.3801  0.3447 -0.8583   142.583  -155.219   -30.838              
         T  <A  34   THR    > matches  <D1425   THR    >                        ( 12.7 A from    C24 STD D8001  )
         K  <A  60   LYS    > matches  <D1097   LYS    >                        (  9.7 A from    C24 STD D8001  )
         E  <A 124   GLU    > matches  <D 497   GLU    >                        ( 31.5 A from    C24 STD D8001  )
 
KERBm  3*FOUND in 1vq8  size =    3  ^    23S RIBOSOMAL RNA;                                      #    1                            
  RMSD =     1.03 A
  TRANSFORM   -0.8455 -0.4689 -0.2554 -0.5309  0.6871  0.4961  0.0571 -0.5550  0.8299    88.677   -66.550    34.675              
         T  <A  34   THR    > matches  <O  84   THR    >                        ( 14.0 A from   CL    CL O9308  )
         K  <A  60   LYS    > matches  <O  88   LYS    >                        ( 12.0 A from   CL    CL O9308  )
         E  <A 124   GLU    > matches  <C 106   GLU    >                        ( 12.9 A from   CD    CD O9205  )
 
KERBm  3*FOUND in 1b35  size =    3  ^    PROTEIN (CRICKET PARALYSIS VIRUS, VP1);                 #    1                            
  RMSD =     1.03 A
  TRANSFORM   -0.3570  0.2678  0.8949 -0.9134  0.1003 -0.3944  0.1954  0.9582 -0.2088  -107.073    23.449    14.104              
         T  <A  34   THR    > matches  <C 171   THR    > 
         K  <A  60   LYS    > matches  <C 129   LYS    > 
         E  <A 124   GLU    > matches  <A  12   GLU    > 
 
KERBm  3*FOUND in 2bi4  size =    3  ^    LACTALDEHYDE REDUCTASE;                                 #    1                            
  RMSD =     1.03 A
  TRANSFORM    0.4740  0.6125  0.6326  0.3812 -0.7903  0.4796 -0.7937 -0.0138  0.6081   -84.095    20.305   -42.018              
         T  <A  34   THR    > matches  <A  23   THR    >                        ( 20.2 A from    N6A NAD A1385  )
         K  <A  60   LYS    > matches  <A  27   LYS    >                        ( 26.1 A from    N6A NAD A1385  )
         E  <A 124   GLU    > matches  <A 241   GLU    >                        ( 15.2 A from    N6A NAD A1385  )
 
KERBm  3*FOUND in 4ogp  size =    3  ^    DNA TOPOISOMERASE 2-ASSOCIATED PROTEIN PAT1;            #    1                            
  RMSD =     1.03 A
  TRANSFORM   -0.2599 -0.9543  0.1472 -0.3006 -0.0649 -0.9516 -0.9177  0.2916  0.2700    12.242    17.473    -0.419              
         T  <A  34   THR    > matches  <A 740   THR    >                        ( 13.2 A from    C6  MES A 901  )
         K  <A  60   LYS    > matches  <A 743   LYS    >                        ( 11.3 A from    C6  MES A 901  )
         E  <A 124   GLU    > matches  <A 685   GLU    >                        ( 14.5 A from    O1  EDO A 903  )
 
KERBm  3*FOUND in 2r7r  size =    3  ^    RNA (5'-R(*UP*GP*UP*GP*AP*CP*C)-3');                    #    1                            
  RMSD =     1.03 A
  TRANSFORM   -0.5763 -0.5470 -0.6071  0.7677 -0.6172 -0.1725  0.2803  0.5655 -0.7756   109.767     7.297    25.430              
         T  <A  34   THR    > matches  <A1074   THR    > 
         K  <A  60   LYS    > matches  <A 871   LYS    > 
         E  <A 124   GLU    > matches  <A 922   GLU    > 
 
KERBm  3*FOUND in 3r4z  size =    3  ^    GLYCOSYL HYDROLASE FAMILY 32, N TERMINAL;               #    3                            
  RMSD =     1.03 A
  TRANSFORM    0.7643 -0.4431 -0.4685 -0.6239 -0.3241 -0.7112 -0.1633 -0.8358  0.5241    26.604    55.761     9.261              
         T  <A  34   THR    > matches  <A  98   THR    >                        ( 26.9 A from    O2  GLA A 375  )
         K  <A  60   LYS    > matches  <A 100   LYS    >                        ( 33.0 A from    O2  GLA A 375  )
         E  <A 124   GLU    > matches  <A  93   GLU    >                        ( 20.5 A from    O3  GLA A 375  )
 
KERBm  3*FOUND in 1ecl  size =    3  ^    ESCHERICHIA COLI TOPOISOMERASE I;                       #    4                            
  RMSD =     1.03 A
  TRANSFORM   -0.5567  0.0410  0.8297  0.3325 -0.9043  0.2678 -0.7613 -0.4249 -0.4898    -3.267     0.222    86.947              
         T  <A  34   THR    > matches  <A  16   THR    > 
         K  <A  60   LYS    > matches  <A  19   LYS    > 
         E  <A 124   GLU    > matches  <A 115   GLU    > 
 
KERBm  3*FOUND in 3n75  size =    3  ^    LYSINE DECARBOXYLASE, INDUCIBLE;                        #    2                            
  RMSD =     1.03 A
  TRANSFORM    0.0299 -0.8028 -0.5955 -0.7176 -0.4319  0.5464  0.6958 -0.4110  0.5890    92.107    10.109   -94.927              
         T  <A  34   THR    > matches  <A 156   THR    >                        ( 32.2 A from    OP1 LLP A 367  )
         K  <A  60   LYS    > matches  <A 160   LYS    >                        ( 37.9 A from    OP1 LLP A 367  )
         E  <A 124   GLU    > matches  <A 186   GLU    >                        ( 23.8 A from    O2DBG4P A 716  )
 
KERBm  3*FOUND in 1uxt  size =    3  ^    GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (NADP+);       #    1                            
  RMSD =     1.03 A
  TRANSFORM   -0.4101  0.6012  0.6858  0.9121  0.2699  0.3087 -0.0005 -0.7521  0.6590   -72.941     4.473    48.052              
         T  <A  34   THR    > matches  <A 149   THR    >                        ( 20.8 A from    O6  G1P A1502  )
         K  <A  60   LYS    > matches  <A 493   LYS    >                        ( 25.8 A from    O6  G1P A1502  )
         E  <A 124   GLU    > matches  <A 156   GLU    >                        ( -4.3 A from    O2P G1P A1502s )
 
KERBm  3*FOUND in 1l5j  size =    3  ^    ACONITATE HYDRATASE 2;                                  #    2                            
  RMSD =     1.03 A
  TRANSFORM    0.8284 -0.4600  0.3197 -0.5495 -0.7780  0.3046 -0.1086  0.4281  0.8972   -35.064    -3.542    27.353              
         T  <A  34   THR    > matches  <A 491   THR    >                        ( 20.2 A from    S4  F3S A 868  )
         K  <A  60   LYS    > matches  <A 407   LYS    >                        ( 25.4 A from    OB2 TRA A 866  )
         E  <A 124   GLU    > matches  <A 590   GLU    >                        ( 13.8 A from   FE4  F3S A 868  )
 
KERBm  3*FOUND in 5hb3  size =    3  ^    NUCLEOPORIN NIC96;                                      #    1                            
  RMSD =     1.03 A
  TRANSFORM    0.8083 -0.5557 -0.1945  0.5392  0.5662  0.6234  0.2363  0.6088 -0.7573     0.640   -43.290    46.728              
         T  <A  34   THR    > matches  <B  69   THR    >                        (  9.6 A from   CL    CL A1201  )
         K  <A  60   LYS    > matches  <B  67+  LYS    >                        ( 12.9 A from   CL    CL A1201  )
         E  <A 124   GLU    > matches  <A 496   GLU    >                        ( 15.9 A from   CL    CL A1201  )
 
KERBm  3*FOUND in 3t1o  size =    3  ^    GLIDING PROTEIN MGLA;                                   #    1                            
  RMSD =     1.03 A
  TRANSFORM    0.2800 -0.5117 -0.8122 -0.9254 -0.3690 -0.0865  0.2554 -0.7759  0.5769    36.823     2.068    12.898              
         T  <A  34   THR    > matches  <A  26   THR    >                        ( -3.6 A from    O3B GDP A 274s )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        (  7.8 A from    O1A GDP A 274  )
         E  <A 124   GLU    > matches  <A 115   GLU    >                        ( 11.0 A from   MG    MG A 197  )
 
KERBm  3*FOUND in 1v2z  size =    3  ^    CIRCADIAN CLOCK PROTEIN KAIA HOMOLOG;                   #    1                            
  RMSD =     1.04 A
  TRANSFORM   -0.3028 -0.8600  0.4109  0.7840 -0.4699 -0.4057 -0.5420 -0.1993 -0.8164    24.941     8.411    36.251              
         T  <A  34   THR    > matches  <A 242   THR    > 
         K  <A  60   LYS    > matches  <A 245   LYS    > 
         E  <A 124   GLU    > matches  <A 217   GLU    > 
 
KERBm  3*FOUND in 1wdu  size =    3  ^    TRAS1 ORF2P;                                            #    1                            
  RMSD =     1.04 A
  TRANSFORM   -0.3730 -0.3441  0.8617 -0.7555  0.6517 -0.0667  0.5386  0.6759  0.5031    19.480   -38.015    19.429              
         T  <A  34   THR    > matches  <A 180   THR    >                        ( 18.9 A from    O3  PO4 A 249  )
         K  <A  60   LYS    > matches  <A 141   LYS    >                        ( 23.1 A from    O3  PO4 A 249  )
         E  <A 124   GLU    > matches  <A 169   GLU    >                        (  7.8 A from   CL    CL A 250  )
 
KERBm  3*FOUND in 4cjm  size =    3  ^    FIBROBLAST GROWTH FACTOR 18;                            #    1                            
  RMSD =     1.04 A
  TRANSFORM   -0.6490  0.4556  0.6093 -0.3926  0.4854 -0.7812  0.6517  0.7462  0.1361    26.882     6.974    20.305              
         T  <A  34   THR    > matches  <A  90   THR    >                        (  8.4 A from    O3  SO4 A1183  )
         K  <A  60   LYS    > matches  <A  51+  LYS    >                        (  8.1 A from    O3  SO4 A1183  )
         E  <A 124   GLU    > matches  <A 135   GLU    >                        ( 25.0 A from    O3  SO4 A1183  )
 
KERBm  3*FOUND in 1wdi  size =    3  ^    HYPOTHETICAL PROTEIN TT0907;                            #    1                            
  RMSD =     1.05 A
  TRANSFORM   -0.7710 -0.5642  0.2953  0.0790  0.3754  0.9235  0.6319 -0.7353  0.2448    73.416   -57.291   -10.343              
         T  <A  34   THR    > matches  <A 290   THR    >                        ( 20.0 A from    O6  CIT A1322  )
         K  <A  60   LYS    > matches  <A 292   LYS    >                        ( 22.5 A from    O6  CIT A1322  )
         E  <A 124   GLU    > matches  <A   2   GLU    >                        ( 24.0 A from    C4  CIT A1322  )
 
KERBm  3*FOUND in 4po4  size =    3  ^    LAMPETRA PLANERI VLRC;                                  #    1                            
  RMSD =     1.05 A
  TRANSFORM    0.4915  0.8405 -0.2281 -0.1960  0.3620  0.9113 -0.8486  0.4031 -0.3427    41.065    14.440    -1.878              
         T  <A  34   THR    > matches  <A  67   THR    > 
         K  <A  60   LYS    > matches  <A  65   LYS    > 
         E  <A 124   GLU    > matches  <A 163   GLU    > 
 
KERBm  3*FOUND in 4nad  size =    3  ^    REGULATION OF NUCLEAR PRE-MRNA DOMAIN-CONTAINING PR     #    2                            
  RMSD =     1.05 A
  TRANSFORM    0.2342  0.9205 -0.3127  0.8521 -0.0394  0.5220 -0.4681  0.3887  0.7936    63.428   -61.838   -68.687              
         T  <A  34   THR    > matches  <A 262   THR    > 
         K  <A  60   LYS    > matches  <A 266   LYS    > 
         E  <A 124   GLU    > matches  <A 249   GLU    > 
 
KERBm  3*FOUND in 2vcc  size =    3  ^    ALPHA-N-ACETYLGLUCOSAMINIDASE;                          #    2                            
  RMSD =     1.05 A
  TRANSFORM    0.5955 -0.3955 -0.6992 -0.4981 -0.8647  0.0649  0.6303 -0.3096  0.7120     9.690     1.493    -2.780              
         T  <A  34   THR    > matches  <A 787   THR    >                        ( 25.3 A from    O3  GOL A1915  )
         K  <A  60   LYS    > matches  <A 790   LYS    >                        ( 29.5 A from    O3  GOL A1915  )
         E  <A 124   GLU    > matches  <A 775   GLU    >                        ( 23.4 A from    O3  GOL A1915  )
 
KERBm  3*FOUND in 3mgg  size =    3  ^    METHYLTRANSFERASE;                                      #    1                            
  RMSD =     1.05 A
  TRANSFORM    0.2954 -0.6854 -0.6656  0.9458  0.1113  0.3051  0.1350  0.7196 -0.6811    82.159   -18.020    24.345              
         T  <A  34   THR    > matches  <A 265   THR    > 
         K  <A  60   LYS    > matches  <A 190   LYS    > 
         E  <A 124   GLU    > matches  <A  61   GLU    > 
 
KERBm  3*FOUND in 6eop  size =    3  ^    DIPEPTIDYL PEPTIDASE 8;                                 #    2                            
  RMSD =     1.05 A
  TRANSFORM   -0.7891 -0.4991 -0.3583  0.6032 -0.7397 -0.2982  0.1162  0.4514 -0.8847   189.603    72.023   261.711              
         T  <A  34   THR    > matches  <A 483   THR    >                        ( 23.8 A from    OA2 FLC A 901  )
         K  <A  60   LYS    > matches  <A 481   LYS    >                        ( 23.5 A from    OA2 FLC A 901  )
         E  <A 124   GLU    > matches  <A 488   GLU    >                        ( 28.9 A from    OG2 FLC A 901  )
 
KERBm  3*FOUND in 5kym  size =    3  ^    1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE;         #    1                            
  RMSD =     1.05 A
  TRANSFORM    0.4263 -0.6534  0.6256  0.7650 -0.1087 -0.6348 -0.4828 -0.7492 -0.4535    24.212    14.366   146.282              
         T  <A  34   THR    > matches  <A 179   THR    >                        ( 22.6 A from    C9  DD9 A 304  )
         K  <A  60   LYS    > matches  <A 146   LYS    >                        ( 26.1 A from    C8  DD9 A 304  )
         E  <A 124   GLU    > matches  <A 231   GLU    >                        ( 26.3 A from    C9  DD9 A 304  )
 
KERBm  3*FOUND in 2r8q  size =    3  ^    CLASS I PHOSPHODIESTERASE PDEB1;                        #    1                            
  RMSD =     1.05 A
  TRANSFORM   -0.3764 -0.6577 -0.6525  0.6869 -0.6707  0.2797  0.6216  0.3430 -0.7042    52.260   -17.912    17.539              
         T  <A  34   THR    > matches  <A 699   THR    >                        ( 20.9 A from   ZN    ZN A   1  )
         K  <A  60   LYS    > matches  <A 701   LYS    >                        ( 25.4 A from   ZN    ZN A   1  )
         E  <A 124   GLU    > matches  <A 628   GLU    >                        ( 21.0 A from    C10 IBM A   3  )
 
KERBm  3*FOUND in 4gt8  size =    3  ^    SENSOR PROTEIN VRAS;                                    #    1                            
  RMSD =     1.05 A
  TRANSFORM   -0.1408  0.4112 -0.9006  0.9756  0.2125 -0.0555 -0.1686  0.8864  0.4311    58.501   -21.938   -23.538              
         T  <A  34   THR    > matches  <A 274   THR    >                        ( 12.9 A from    N6  ADP A 401  )
         K  <A  60   LYS    > matches  <A 272   LYS    >                        ( 15.9 A from    N6  ADP A 401  )
         E  <A 124   GLU    > matches  <A 250   GLU    >                        ( 23.4 A from   MG    MG A 402  )
 
KERBm  3*FOUND in 2dc0  size =    3  ^    PROBABLE AMIDASE;                                       #    2                            
  RMSD =     1.05 A
  TRANSFORM   -0.1409 -0.1901 -0.9716 -0.9590  0.2700  0.0862 -0.2460 -0.9439  0.2203    85.243   -23.444    67.137              
         T  <A  34   THR    > matches  <A  83   THR    > 
         K  <A  60   LYS    > matches  <A 114   LYS    > 
         E  <A 124   GLU    > matches  <A 303   GLU    > 
 
KERBm  3*FOUND in 2bs2  size =    3  ^    QUINOL-FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT A;       #    1                            
  RMSD =     1.05 A
  TRANSFORM    0.2633 -0.1030 -0.9592  0.2913  0.9564 -0.0227 -0.9197  0.2734 -0.2819    36.084     6.152    56.097              
         T  <A  34   THR    > matches  <A  92   THR    >                        ( 15.5 A from    O2  FAD A1656  )
         K  <A  60   LYS    > matches  <A  95   LYS    >                        ( 19.3 A from    O2  FAD A1656  )
         E  <A 124   GLU    > matches  <A 382   GLU    >                        ( 18.6 A from   NA    NA A1658  )
 
KERBm  3*FOUND in 4rei  size =    3  ^    MAJOR LATEX-LIKE PROTEIN;                               #    1                            
  RMSD =     1.05 A
  TRANSFORM    0.3731  0.7395 -0.5603  0.8232  0.0147  0.5676 -0.4280  0.6730  0.6033    12.581   -18.439     1.575              
         T  <A  34   THR    > matches  <A   4   THR    >                        ( 18.1 A from    CAB 3MV A 201  )
         K  <A  60   LYS    > matches  <A   2+  LYS    >                        ( 21.2 A from    CAA 3MV A 201  )
         E  <A 124   GLU    > matches  <A  72   GLU    >                        ( 12.8 A from    CAB 3MV A 201  )
 
KERBm  3*FOUND in 3ecm  size =    3  ^    HIGH AFFINITY CAMP-SPECIFIC AND IBMX-INSENSITIVE        #    2                            
  RMSD =     1.05 A
  TRANSFORM    0.6359 -0.7714  0.0241  0.5896  0.5057  0.6298  0.4980  0.3863 -0.7764    28.828   -12.124    -6.342              
         T  <A  34   THR    > matches  <A 752   THR    >                        ( 18.8 A from   MG    MG A   2  )
         K  <A  60   LYS    > matches  <A 756   LYS    >                        ( 24.3 A from   MG    MG A   2  )
         E  <A 124   GLU    > matches  <A 739   GLU    >                        ( 16.4 A from   ZN    ZN A   1  )
 
KERBm  3*FOUND in 3gf3  size =    3  ^    GLUTACONYL-COA DECARBOXYLASE SUBUNIT A;                 #    3                            
  RMSD =     1.05 A
  TRANSFORM    0.9966  0.0023  0.0825  0.0065  0.9943 -0.1066  0.0822 -0.1068 -0.9909    50.970   -17.565    -3.507              
         T  <A  34   THR    > matches  <A 418   THR    >                        (  9.1 A from   CL    CL A 590  )
         K  <A  60   LYS    > matches  <A 388   LYS    >                        (  7.8 A from   CL    CL A 590  )
         E  <A 124   GLU    > matches  <A  30   GLU    >                        ( 27.7 A from   CL    CL A 590  )
 
KERBm  3*FOUND in 1kqf  size =    3  ^    FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUB     #    1                            
  RMSD =     1.05 A
  TRANSFORM    0.0451  0.9423 -0.3318  0.6634  0.2201  0.7152 -0.7469  0.2524  0.6152    30.070  -107.393   -81.750              
         T  <A  34   THR    > matches  <A 550   THR    >                        ( 22.2 A from    N2  MGD A1018  )
         K  <A  60   LYS    > matches  <A 577   LYS    >                        ( 24.4 A from    O2A MGD A1018  )
         E  <A 124   GLU    > matches  <A 147   GLU    >                        ( 33.3 A from    N2  MGD A1018  )
 
KERBm  3*FOUND in 3s83  size =    3  ^    GGDEF FAMILY PROTEIN;                                   #    1                            
  RMSD =     1.05 A
  TRANSFORM   -0.8055 -0.5925  0.0020  0.3437 -0.4700 -0.8130 -0.4826  0.6542 -0.5823    48.269    -4.565    47.755              
         T  <A  34   THR    > matches  <A 380   THR    >                        (  6.0 A from    K     K A 548  )
         K  <A  60   LYS    > matches  <A 414   LYS    >                        (  7.7 A from    K     K A 548  )
         E  <A 124   GLU    > matches  <A 542   GLU    >                        ( 20.7 A from    K     K A 548  )
 
KERBm  3*FOUND in 2oze  size =    3  ^    ORF DELTA';                                             #    1                            
  RMSD =     1.05 A
  TRANSFORM   -0.3627 -0.1235 -0.9237 -0.0139  0.9918 -0.1271 -0.9318  0.0332  0.3614    47.844   -34.286    45.877              
         T  <A  34   THR    > matches  <A  78   THR    >                        (  4.7 A from    O1A AGS A 300  )
         K  <A  60   LYS    > matches  <A  81   LYS    >                        (  9.8 A from    O1A AGS A 300  )
         E  <A 124   GLU    > matches  <A 188   GLU    >                        ( 13.1 A from    O1B AGS A 300  )
 
KERBm  3*FOUND in 4igb  size =    3  ^    LPXTG CELL WALL SURFACE PROTEIN;                        #    1                            
  RMSD =     1.05 A
  TRANSFORM   -0.6859  0.3793 -0.6210 -0.6787 -0.0256  0.7340 -0.2625 -0.9249 -0.2750    74.998   -41.962    41.280              
         T  <A  34   THR    > matches  <A 138   THR    >                        ( 17.4 A from    O   ACT A 504  )
         K  <A  60   LYS    > matches  <A 136   LYS    >                        ( 14.1 A from    O   ACT A 504  )
         E  <A 124   GLU    > matches  <A 148   GLU    >                        ( 28.1 A from    O3  SO4 A 502  )
 
KERBm  3*FOUND in 4a2l  size =    3  ^    TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPON     #    1                            
  RMSD =     1.06 A
  TRANSFORM    0.2042 -0.9749 -0.0886 -0.4054 -0.1665  0.8988  0.8910  0.1476  0.4292    64.888     2.465   -67.058              
         T  <A  34   THR    > matches  <A 666   THR    >                        (  9.9 A from    O4  PEG A1788  )
         K  <A  60   LYS    > matches  <A 768   LYS    >                        ( 11.0 A from    C6  PGE A1785  )
         E  <A 124   GLU    > matches  <A 696   GLU    >                        ( 22.2 A from    O2  EDO A1787  )
 
KERBm  3*FOUND in 3lpm  size =    3  ^    PUTATIVE METHYLTRANSFERASE;                             #    2                            
  RMSD =     1.06 A
  TRANSFORM    0.1536  0.8956 -0.4175  0.2118  0.3828  0.8992 -0.9652  0.2265  0.1309    15.579  -116.863    44.938              
         T  <A  34   THR    > matches  <A 154   THR    > 
         K  <A  60   LYS    > matches  <A 152+  LYS    > 
         E  <A 124   GLU    > matches  <A 105   GLU    > 
 
KERBm  3*FOUND in 4lcq  size =    3  ^    DIHYDROPYRIMIDINASE;                                    #    1                            
  RMSD =     1.06 A
  TRANSFORM    0.4975  0.6149  0.6118  0.6545 -0.7290  0.2004 -0.5692 -0.3007  0.7652   -13.583     2.032    25.193              
         T  <A  34   THR    > matches  <A 116   THR    >                        ( 16.0 A from    C7  URQ A 603  )
         K  <A  60   LYS    > matches  <A 120   LYS    >                        ( 18.1 A from    C7  URQ A 603  )
         E  <A 124   GLU    > matches  <A 141   GLU    >                        ( 13.3 A from    O   KCX A 155  )
 
KERBm  3*FOUND in 1lkx  size =    3  ^    MYOSIN IE HEAVY CHAIN;                                  #    5                            
  RMSD =     1.06 A
  TRANSFORM    0.6154  0.4856  0.6208 -0.7551  0.5891  0.2877  0.2260  0.6458 -0.7293  -119.930    54.180   -40.225              
         T  <A  34   THR    > matches  <A 656   THR    >                        ( 42.5 A from    N6  ADP A 791  )
         K  <A  60   LYS    > matches  <A 653   LYS    >                        ( 44.9 A from    O3B ADP A 791  )
         E  <A 124   GLU    > matches  <A 690   GLU    >                        ( 30.0 A from    N6  ADP A 791  )
 
KERBm  3*FOUND in 1rrm  size =    3  ^    LACTALDEHYDE REDUCTASE;                                 #    1                            
  RMSD =     1.06 A
  TRANSFORM   -0.0124  0.9253  0.3789  0.7472 -0.2433  0.6185 -0.6645 -0.2908  0.6884     9.770   -59.518    29.231              
         T  <A  34   THR    > matches  <A  23   THR    >                        ( 20.3 A from    N6  APR A 389  )
         K  <A  60   LYS    > matches  <A  27   LYS    >                        ( 26.0 A from    N6  APR A 389  )
         E  <A 124   GLU    > matches  <A 241   GLU    >                        ( 15.8 A from    N6  APR A 389  )
 
KERBm  3*FOUND in 2h3h  size =    3  ^    SUGAR ABC TRANSPORTER, PERIPLASMIC SUGAR-BINDING        #    1                            
  RMSD =     1.07 A
  TRANSFORM   -0.1603  0.3515  0.9224  0.4130  0.8726 -0.2608  0.8965 -0.3391  0.2850   -33.012    21.506     7.543              
         T  <A  34   THR    > matches  <A  74   THR    >                        ( 19.0 A from    O3  BGC A1500  )
         K  <A  60   LYS    > matches  <A  77   LYS    >                        ( 24.8 A from    O3  BGC A1500  )
         E  <A 124   GLU    > matches  <A 164   GLU    >                        ( -2.8 A from    O4  BGC A1500s )
 
KERBm  3*FOUND in 2cxn  size =    3  ^    GLUCOSE-6-PHOSPHATE ISOMERASE;                          #    2                            
  RMSD =     1.07 A
  TRANSFORM    0.9723  0.0150 -0.2334 -0.0232 -0.9868 -0.1603  0.2327 -0.1613  0.9591     0.581     2.779    16.457              
         T  <A  34   THR    > matches  <A 168   THR    >                        ( 16.7 A from    O2  PO4 A1601  )
         K  <A  60   LYS    > matches  <A 172   LYS    >                        ( 21.3 A from    O2  PO4 A1601  )
         E  <A 124   GLU    > matches  <A 358   GLU    >                        (  7.8 A from    O4  PO4 A1601  )
 
KERBm  3*FOUND in 4xmr  size =    3  ^    PUTATIVE METHYL-ACCEPTING CHEMOTAXIS SIGNAL TRANSDU     #    1                            
  RMSD =     1.07 A
  TRANSFORM   -0.2085  0.9335  0.2917 -0.5270 -0.3585  0.7705 -0.8239 -0.0069 -0.5667    60.218     2.524   -17.376              
         T  <A  34   THR    > matches  <A 170   THR    >                        ( -3.8 A from    O   ILE A 301s )
         K  <A  60   LYS    > matches  <A 173   LYS    >                        (  8.1 A from    O   ILE A 301  )
         E  <A 124   GLU    > matches  <A  94   GLU    >                        ( 15.5 A from    CD1 ILE A 301  )
 
KERBm  3*FOUND in 1fzc  size =    3  ^    FIBRIN;                                                 #    1                            
  RMSD =     1.07 A
  TRANSFORM    0.7192  0.3189  0.6173  0.4419 -0.8955 -0.0523 -0.5361 -0.3104  0.7850    -9.388     8.329   -42.363              
         T  <A  34   THR    > matches  <B 280   THR    >                        ( 37.3 A from   CA    CA C   1  )
         K  <A  60   LYS    > matches  <B 283   LYS    >                        ( 34.4 A from   CA    CA C   1  )
         E  <A 124   GLU    > matches  <B 313   GLU    >                        ( 32.6 A from   CA    CA B   2  )
 
KERBm  3*FOUND in 4f92  size =    3  ^    U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASE     #    5                            
  RMSD =     1.07 A
  TRANSFORM   -0.1889 -0.9667  0.1727  0.9803 -0.1754  0.0903  0.0570 -0.1864 -0.9808    10.786    79.519   -17.985              
         T  <A  34   THR    > matches  <B1414   THR    >                        ( 50.9 A from    O1 ASAN B2201  )
         K  <A  60   LYS    > matches  <B1417   LYS    >                        ( 55.7 A from    O1 ASAN B2201  )
         E  <A 124   GLU    > matches  <B1913   GLU    >                        ( 36.9 A from    O1 ASAN B2201  )
 
KERBm  3*FOUND in 2xvl  size =    3  ^    ALPHA-XYLOSIDASE, PUTATIVE, XYL31A;                     #    3                            
  RMSD =     1.07 A
  TRANSFORM   -0.2351 -0.3982  0.8867 -0.9344 -0.1585 -0.3189 -0.2675  0.9035  0.3349    56.804    42.504   -68.850              
         T  <A  34   THR    > matches  <A 809   THR    >                        ( 17.0 A from    O3  SO4 A1992  )
         K  <A  60   LYS    > matches  <A 668   LYS    >                        ( 21.1 A from    O3  SO4 A1992  )
         E  <A 124   GLU    > matches  <A 847   GLU    >                        ( -3.7 A from    O2  SO4 A1992s )
 
KERBm  3*FOUND in 2ihb  size =    3  ^    GUANINE NUCLEOTIDE-BINDING PROTEIN G(K) SUBUNIT ALP     #    2                            
  RMSD =     1.07 A
  TRANSFORM    0.9374 -0.3469  0.0306 -0.3384 -0.8868  0.3146  0.0820  0.3053  0.9487    19.587    -8.501    31.014              
         T  <A  34   THR    > matches  <B  27   THR    > 
         K  <A  60   LYS    > matches  <B  24+  LYS    > 
         E  <A 124   GLU    > matches  <B  57   GLU    > 
 
KERBm  3*FOUND in 1yvu  size =    3  ^    HYPOTHETICAL PROTEIN AQ_1447;                           #    1                            
  RMSD =     1.08 A
  TRANSFORM   -0.8210 -0.5410 -0.1825 -0.5378  0.8401 -0.0711 -0.1917 -0.0398  0.9806    78.750   -54.934    -9.111              
         T  <A  34   THR    > matches  <A  71   THR    >                        ( 32.8 A from   CA    CA A 901  )
         K  <A  60   LYS    > matches  <A  81   LYS    >                        ( 34.7 A from   CA    CA A 901  )
         E  <A 124   GLU    > matches  <A 227   GLU    >                        ( 39.1 A from   CA    CA A 901  )
 
KERBm  3*FOUND in 2dq0  size =    3  ^    SERYL-TRNA SYNTHETASE;                                  #    1                            
  RMSD =     1.08 A
  TRANSFORM    0.5515  0.4825  0.6804 -0.2236  0.8714 -0.4367  0.8036 -0.0887 -0.5885   -16.604     5.042     9.479              
         T  <A  34   THR    > matches  <A 288   THR    >                        (  6.4 A from    O4  SO4 A2001  )
         K  <A  60   LYS    > matches  <A 291   LYS    >                        ( -4.8 A from    O3  SO4 A2003s )
         E  <A 124   GLU    > matches  <A 226   GLU    >                        ( 10.1 A from    N10 SSA A1001  )
 
KERBm  3*FOUND in 3zdb  size =    3  ^    PROTEIN XNI;                                            #    2                            
  RMSD =     1.08 A
  TRANSFORM   -0.5635  0.5447  0.6211  0.8132  0.2332  0.5332 -0.1456 -0.8055  0.5744    20.676   -26.603    44.431              
         T  <A  34   THR    > matches  <A 126   THR    >                        (  9.7 A from   MG    MG A1253  )
         K  <A  60   LYS    > matches  <A 128   LYS    >                        ( 12.6 A from   MG    MG A1253  )
         E  <A 124   GLU    > matches  <A  80   GLU    >                        ( 17.4 A from   MG    MG A1255  )
 
KERBm  3*FOUND in 2xxp  size =    3  ^    CPS2A;                                                  #    1                            
  RMSD =     1.08 A
  TRANSFORM    0.1753  0.9569 -0.2315  0.9384 -0.2335 -0.2546  0.2976  0.1726  0.9389    -2.046     4.196    49.776              
         T  <A  34   THR    > matches  <A 316   THR    >                        (  9.2 A from    C48 DSL A1485  )
         K  <A  60   LYS    > matches  <A 320   LYS    >                        ( 12.8 A from    C08 DSL A1485  )
         E  <A 124   GLU    > matches  <A 193   GLU    >                        ( 10.8 A from    H21 PEG A1486  )
 
KERBm  3*FOUND in 1bs0  size =    3  ^    PROTEIN (8-AMINO-7-OXONANOATE SYNTHASE);                #    1                            
  RMSD =     1.08 A
  TRANSFORM    0.0704 -0.9712  0.2277 -0.5844  0.1448  0.7985  0.8084  0.1893  0.5573     7.647   -46.512    -3.853              
         T  <A  34   THR    > matches  <A 233   THR    >                        (  4.1 A from    O2  SO4 A 400  )
         K  <A  60   LYS    > matches  <A 236   LYS    >                        (  3.0 A from    O3  SO4 A 400s )
         E  <A 124   GLU    > matches  <A 228   GLU    >                        ( 21.2 A from    O4  SO4 A 401  )
 
KERBm  3*FOUND in 4a8x  size =    3  ^    RNA-BINDING PROTEIN WITH SERINE-RICH DOMAIN 1;          #    1                            
  RMSD =     1.08 A
  TRANSFORM    0.8182  0.5672  0.0939  0.2865 -0.5439  0.7888 -0.4985  0.6185  0.6075    10.316    10.907    12.434              
         T  <A  34   THR    > matches  <C  70   THR    > 
         K  <A  60   LYS    > matches  <C  74   LYS    > 
         E  <A 124   GLU    > matches  <C  17   GLU    > 
 
KERBm  3*FOUND in 3qsj  size =    3  ^    NUDIX HYDROLASE;                                        #    1                            
  RMSD =     1.08 A
  TRANSFORM    0.2296 -0.5601 -0.7960  0.9664  0.0342  0.2547  0.1155  0.8277 -0.5491    21.470   -59.620     7.658              
         T  <A  34   THR    > matches  <A   2   THR    >                        (  9.7 A from    O2  GOL A 231  )
         K  <A  60   LYS    > matches  <A   0+  LYS    >                        ( 14.4 A from    O2  GOL A 231  )
         E  <A 124   GLU    > matches  <A  79   GLU    >                        ( -3.3 A from   CA    CA A 230s )
 
KERBm  3*FOUND in 1u7o  size =    3  ^    MAGNESIUM-DEPENDENT PHOSPHATASE-1;                      #    1                            
  RMSD =     1.08 A
  TRANSFORM    0.2309 -0.2507  0.9401 -0.2775  0.9091  0.3106  0.9326  0.3326 -0.1404   -27.610   -26.604   -33.644              
         T  <A  34   THR    > matches  <A 156   THR    >                        ( 24.7 A from    OXT ACT A 166  )
         K  <A  60   LYS    > matches  <A 159   LYS    >                        ( 30.5 A from    OXT ACT A 166  )
         E  <A 124   GLU    > matches  <A 124   GLU    >                        ( 10.5 A from    OXT ACT A 166  )
 
KERBm  3*FOUND in 4rd8  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.09 A
  TRANSFORM    0.3861 -0.9178 -0.0930  0.4289  0.2679 -0.8627 -0.8167 -0.2932 -0.4971    24.672    37.456    78.511              
         T  <A  34   THR    > matches  <A  30   THR    > 
         K  <A  60   LYS    > matches  <A   9+  LYS    > 
         E  <A 124   GLU    > matches  <A  44   GLU    > 
 
KERBm  3*FOUND in 4fxy  size =    3  ^    NEUROLYSIN, MITOCHONDRIAL;                              #    1                            
  RMSD =     1.09 A
  TRANSFORM   -0.6551  0.2752 -0.7037  0.4928 -0.5503 -0.6740  0.5727  0.7883 -0.2248   120.280   -11.850   -10.894              
         T  <A  34   THR    > matches  <P 247   THR    >                        ( 30.7 A from   ZN    ZN P 702  )
         K  <A  60   LYS    > matches  <P 250   LYS    >                        ( 33.9 A from   ZN    ZN P 702  )
         E  <A 124   GLU    > matches  <P 196   GLU    >                        ( 39.6 A from   ZN    ZN P 702  )
 
KERBm  3*FOUND in 5ig0  size =    3  ^    CAMK/CAMK2 PROTEIN KINASE;                              #    1                            
  RMSD =     1.09 A
  TRANSFORM   -0.9145 -0.1824  0.3612  0.1618  0.6532  0.7397  0.3708 -0.7349  0.5678    -5.950    19.306    20.250              
         T  <A  34   THR    > matches  <A 373   THR    >                        ( 13.3 A from    O2  SO4 A 501  )
         K  <A  60   LYS    > matches  <A 461   LYS    >                        (-13.4 A from    H12 GOL A 504s )
         E  <A 124   GLU    > matches  <A 385   GLU    >                        ( -2.5 A from    O1  GOL A 502s )
 
KERBm  3*FOUND in 4kx7  size =    3  ^    GLUTAMYL AMINOPEPTIDASE;                                #    1                            
  RMSD =     1.09 A
  TRANSFORM    0.0934 -0.9696 -0.2262 -0.2544 -0.2429  0.9361  0.9626  0.0299  0.2694    86.522   -10.054    31.971              
         T  <A  34   THR    > matches  <A 945   THR    >                        (  8.6 A from    O6  NAG A1007  )
         K  <A  60   LYS    > matches  <A 674   LYS    >                        ( -5.9 A from    C6  NAG A1007s )
         E  <A 124   GLU    > matches  <A 902   GLU    >                        ( 29.1 A from    O6  NAG A1007  )
 
KERBm  3*FOUND in 3wwn  size =    3  ^    PUTATIVE ACETYLGLUTAMATE KINASE-LIKE PROTEIN;           #    2                            
  RMSD =     1.09 A
  TRANSFORM   -0.2461  0.3413 -0.9072 -0.8788 -0.4734  0.0603  0.4089 -0.8120 -0.4165    -6.006   -37.058    43.394              
         T  <A  34   THR    > matches  <A 132   THR    >                        ( 10.6 A from    O2  SO4 A 301  )
         K  <A  60   LYS    > matches  <A 113   LYS    >                        ( 12.3 A from    O2  SO4 A 301  )
         E  <A 124   GLU    > matches  <A  46   GLU    >                        ( 14.4 A from    O4  SO4 A 301  )
 
KERBm  3*FOUND in 4bl0  size =    3  ^    CELL CYCLE ARREST PROTEIN BUB3;                         #    1                            
  RMSD =     1.09 A
  TRANSFORM    0.7871 -0.3539 -0.5052  0.6119  0.3453  0.7115  0.0774  0.8692 -0.4884    -7.464    38.242    10.596              
         T  <A  34   THR    > matches  <B 311   THR    > 
         K  <A  60   LYS    > matches  <B 314+  LYS    > 
         E  <A 124   GLU    > matches  <B 333   GLU    > 
 
KERBm  3*FOUND in 5m42  size =    3  ^    PROLINE DEHYDROGENASE;                                  #    1                            
  RMSD =     1.09 A
  TRANSFORM    0.8092  0.2637 -0.5250  0.2261 -0.9646 -0.1360  0.5423  0.0086  0.8402   -14.144    21.736    -5.425              
         T  <A  34   THR    > matches  <A 226   THR    >                        ( -3.5 A from    O2P FMN A2001s )
         K  <A  60   LYS    > matches  <A 187   LYS    >                        ( -3.0 A from    O3P FMN A2001s )
         E  <A 124   GLU    > matches  <A  54   GLU    >                        ( 17.8 A from    C7M FMN A2001  )
 
KERBm  3*FOUND in 3haz  size =    3  ^    PROLINE DEHYDROGENASE;                                  #    2                            
  RMSD =     1.09 A
  TRANSFORM    0.7649  0.0919  0.6376  0.5330  0.4656 -0.7065  0.3618 -0.8802 -0.3071    30.662   -11.299   -24.134              
         T  <A  34   THR    > matches  <A 218   THR    >                        ( 18.9 A from    C7M FAD A2001  )
         K  <A  60   LYS    > matches  <A 221   LYS    >                        ( 24.8 A from    C7M FAD A2001  )
         E  <A 124   GLU    > matches  <A  80   GLU    >                        ( 17.5 A from    O3  SO4 A1006  )
 
KERBm  3*FOUND in 3few  size =    3  ^    COLICIN S4;                                             #    1                            
  RMSD =     1.10 A
  TRANSFORM   -0.7752  0.0337  0.6308 -0.0569 -0.9982 -0.0166 -0.6292  0.0488 -0.7757    96.618    87.020    81.859              
         T  <A  34   THR    > matches  <X  82   THR    >                        ( 10.4 A from   NA    NA X 506  )
         K  <A  60   LYS    > matches  <X  87   LYS    >                        ( 13.4 A from   NA    NA X 506  )
         E  <A 124   GLU    > matches  <X 249   GLU    >                        ( 14.9 A from   NA    NA X 506  )
 
KERBm  3*FOUND in 4cvh  size =    3  ^    ISOPRENOID SYNTHASE DOMAIN-CONTAINING PROTEIN;          #    2                            
  RMSD =     1.10 A
  TRANSFORM   -0.0246 -0.3333  0.9425  0.4622  0.8322  0.3063  0.8864 -0.4432 -0.1336    34.129   -88.027     0.820              
         T  <A  34   THR    > matches  <A 316   THR    >                        ( 20.3 A from    O1  EDO A1453  )
         K  <A  60   LYS    > matches  <A 314   LYS    >                        ( 18.6 A from    O1  EDO A1453  )
         E  <A 124   GLU    > matches  <A 293   GLU    >                        (-37.1 A from    O1  EDO A1453s )
 
KERBm  3*FOUND in 1u0l  size =    3  ^    PROBABLE GTPASE ENGC;                                   #    1                            
  RMSD =     1.10 A
  TRANSFORM   -0.9415 -0.1364  0.3081 -0.1703  0.9816 -0.0859  0.2908  0.1334  0.9475    65.576   -67.610   -38.786              
         T  <A  34   THR    > matches  <A  87   THR    >                        (  8.3 A from    N7  GDP A 299  )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        ( -2.9 A from    O4' GDP A 299s )
         E  <A 124   GLU    > matches  <A 280   GLU    >                        ( 17.7 A from   ZN    ZN A 298  )
 
KERBm  3*FOUND in 1vkn  size =    3  ^    N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE;            #    1                            
  RMSD =     1.10 A
  TRANSFORM    0.8255 -0.5165 -0.2276  0.4105  0.2725  0.8702  0.3874  0.8118 -0.4370    27.594   -55.052    14.801              
         T  <A  34   THR    > matches  <A 240   THR    > 
         K  <A  60   LYS    > matches  <A 173   LYS    > 
         E  <A 124   GLU    > matches  <A 250   GLU    > 
 
KERBm  3*FOUND in 2yln  size =    3  ^    PUTATIVE ABC TRANSPORTER, PERIPLASMIC BINDING PROTE     #    1                            
  RMSD =     1.10 A
  TRANSFORM    0.1176 -0.7495 -0.6515  0.7689  0.4839 -0.4180 -0.6285  0.4518 -0.6332    34.189   -11.668    35.063              
         T  <A  34   THR    > matches  <A  52   THR    >                        ( -2.7 A from    O2  GOL A1281s )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        ( -5.2 A from    O2  GOL A1281s )
         E  <A 124   GLU    > matches  <A 242   GLU    >                        ( 16.7 A from    C1  GOL A1281  )
 
KERBm  3*FOUND in 4k36  size =    3  ^    ANAEROBIC SULFATASE-MATURATING ENZYME;                  #    2                            
  RMSD =     1.10 A
  TRANSFORM   -0.9304  0.3212  0.1767  0.3614  0.8840  0.2965  0.0610 -0.3397  0.9386    38.840   -34.016   -23.599              
         T  <A  34   THR    > matches  <A 215   THR    >                        ( 11.0 A from    S1  SF4 A 502  )
         K  <A  60   LYS    > matches  <A 219   LYS    >                        ( 13.6 A from    S1  SF4 A 502  )
         E  <A 124   GLU    > matches  <A 201   GLU    >                        ( 17.6 A from    N6  SAM A 504  )
 
KERBm  3*FOUND in 2w8m  size =    3  ^    ORF D212;                                               #    1                            
  RMSD =     1.10 A
  TRANSFORM   -0.2021 -0.5431 -0.8150  0.5041  0.6558 -0.5620 -0.8397  0.5244 -0.1412    87.951   -26.880    37.090              
         T  <A  34   THR    > matches  <A 126   THR    > 
         K  <A  60   LYS    > matches  <A 129   LYS    > 
         E  <A 124   GLU    > matches  <A  28   GLU    > 
 
KERBm  3*FOUND in 3k0b  size =    3  ^    PREDICTED N6-ADENINE-SPECIFIC DNA METHYLASE;            #    1                            
  RMSD =     1.10 A
  TRANSFORM    0.7460 -0.3679 -0.5552  0.6620  0.3186  0.6784  0.0727  0.8736 -0.4812    34.196   -34.568     6.611              
         T  <A  34   THR    > matches  <A 177   THR    >                        (  8.5 A from    O2  EDO A 601  )
         K  <A  60   LYS    > matches  <A 175   LYS    >                        (  5.1 A from    O2  EDO A 601  )
         E  <A 124   GLU    > matches  <A 242   GLU    >                        ( 23.1 A from    O3  GOL A 701  )
 
KERBm  3*FOUND in 2gnx  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.11 A
  TRANSFORM   -0.6014 -0.1762 -0.7792  0.5593  0.6036 -0.5682 -0.5705  0.7776  0.2645    90.342   -42.818   -19.184              
         T  <A  34   THR    > matches  <A 215   THR    > 
         K  <A  60   LYS    > matches  <A 199   LYS    > 
         E  <A 124   GLU    > matches  <A 285   GLU    > 
 
KERBm  3*FOUND in 5yjg  size =    3  ^    PERIOSTIN;                                              #    1                            
  RMSD =     1.11 A
  TRANSFORM   -0.6971 -0.5678  0.4378  0.3301  0.2879  0.8990  0.6364 -0.7712  0.0133   -19.970  -165.385    20.560              
         T  <A  34   THR    > matches  <A  59   THR    >                        (  4.0 A from   CL    CL A 708  )
         K  <A  60   LYS    > matches  <A  61   LYS    >                        (  6.4 A from   CL    CL A 708  )
         E  <A 124   GLU    > matches  <A 140   GLU    >                        (  7.0 A from   CA    CA A 724  )
 
KERBm  3*FOUND in 3tg7  size =    3  ^    HEXON PROTEIN;                                          #    1                            
  RMSD =     1.11 A
  TRANSFORM    0.3324 -0.0544  0.9416  0.2222 -0.9657 -0.1342 -0.9166 -0.2538  0.3089   127.030    -4.101    38.637              
         T  <A  34   THR    > matches  <A 165   THR    > 
         K  <A  60   LYS    > matches  <A 225   LYS    > 
         E  <A 124   GLU    > matches  <A 270   GLU    > 
 
KERBm  3*FOUND in 5il2  size =    3  ^    METTL3;                                                 #    1                            
  RMSD =     1.11 A
  TRANSFORM   -0.3032 -0.5493  0.7787 -0.5034 -0.6015 -0.6203 -0.8091  0.5801  0.0942    11.203    17.583     1.441              
         T  <A  34   THR    > matches  <B 264   THR    >                        ( 16.9 A from    O1  EDO B 502  )
         K  <A  60   LYS    > matches  <B 266   LYS    >                        ( 20.0 A from    O1  EDO B 502  )
         E  <A 124   GLU    > matches  <B 192   GLU    >                        ( -3.2 A from    O2  EDO B 502s )
 
KERBm  3*FOUND in 1hci  size =    3  ^    ALPHA-ACTININ 2;                                        #    1                            
  RMSD =     1.11 A
  TRANSFORM   -0.7541  0.5162  0.4061 -0.0535  0.5681 -0.8212  0.6546  0.6410  0.4008   146.698   -50.584    11.780              
         T  <A  34   THR    > matches  <A 513   THR    > 
         K  <A  60   LYS    > matches  <A 509   LYS    > 
         E  <A 124   GLU    > matches  <A 571   GLU    > 
 
KERBm  3*FOUND in 4l9o  size =    3  ^    SEC16,PROTEIN TRANSPORT PROTEIN SEC13;                  #    1                            
  RMSD =     1.11 A
  TRANSFORM   -0.0839  0.8893  0.4495 -0.9331 -0.2284  0.2777 -0.3496  0.3961 -0.8490    12.541    14.164    18.225              
         T  <A  34   THR    > matches  <A2233   THR    >                        ( 15.0 A from    H22 EDO A2408  )
         K  <A  60   LYS    > matches  <A2255   LYS    >                        ( 18.6 A from    H11 EDO A2408  )
         E  <A 124   GLU    > matches  <A2201   GLU    >                        ( 19.3 A from    H21 EDO A2405  )
 
KERBm  3*FOUND in 2o3e  size =    3  ^    NEUROLYSIN;                                             #    3                            
  RMSD =     1.11 A
  TRANSFORM    0.9997 -0.0158  0.0172  0.0183  0.0684 -0.9975 -0.0146 -0.9975 -0.0687    -3.225    18.143    59.696              
         T  <A  34   THR    > matches  <A 345   THR    >                        ( 26.9 A from   ZN    ZN A 679  )
         K  <A  60   LYS    > matches  <A 349   LYS    >                        ( 29.1 A from   ZN    ZN A 679  )
         E  <A 124   GLU    > matches  <A 242   GLU    >                        ( 28.1 A from   ZN    ZN A 679  )
 
KERBm  3*FOUND in 3h92  size =    3  ^    UNCHARACTERIZED ATP-BINDING PROTEIN MJECL15;            #    1                            
  RMSD =     1.11 A
  TRANSFORM    0.3904 -0.5422 -0.7441 -0.9206 -0.2388 -0.3090  0.0101 -0.8056  0.5923    40.957    18.505    -1.402              
         T  <A  34   THR    > matches  <A  76   THR    >                        ( 10.7 A from    C6  PG6 A  93  )
         K  <A  60   LYS    > matches  <A  74   LYS    >                        ( 13.1 A from    C8  PG6 A  93  )
         E  <A 124   GLU    > matches  <A  38   GLU    >                        ( 27.1 A from    C6  PG6 A  93  )
 
KERBm  3*FOUND in 2a1r  size =    3  ^    5'-R(*AP*AP*A)-3';                                      #    1                            
  RMSD =     1.11 A
  TRANSFORM    0.1829 -0.5123  0.8391 -0.6610 -0.6959 -0.2808 -0.7278  0.5033  0.4659    11.796    72.536    22.384              
         T  <A  34   THR    > matches  <A 315   THR    > 
         K  <A  60   LYS    > matches  <A 312   LYS    > 
         E  <A 124   GLU    > matches  <A  30   GLU    > 
 
KERBm  3*FOUND in 2o3e  size =    3  ^    NEUROLYSIN;                                             #    1                            
  RMSD =     1.11 A
  TRANSFORM    0.2288 -0.6266 -0.7450  0.7776  0.5780 -0.2473 -0.5856  0.5227 -0.6195    52.771   -41.829    12.665              
         T  <A  34   THR    > matches  <A 247   THR    >                        ( 30.6 A from   ZN    ZN A 679  )
         K  <A  60   LYS    > matches  <A 250   LYS    >                        ( 33.5 A from   ZN    ZN A 679  )
         E  <A 124   GLU    > matches  <A 196   GLU    >                        ( 39.2 A from   ZN    ZN A 679  )
 
KERBm  3*FOUND in 4p7o  size =    3  ^    POLY-BETA-1,6-N-ACETYL-D-GLUCOSAMINE N-DEACETYLASE;     #    1                            
  RMSD =     1.11 A
  TRANSFORM    0.5849  0.7963  0.1541 -0.5986  0.5521 -0.5804  0.5473 -0.2472 -0.7996    30.243    26.401    50.976              
         T  <A  34   THR    > matches  <A 591   THR    > 
         K  <A  60   LYS    > matches  <A 595   LYS    > 
         E  <A 124   GLU    > matches  <A 580   GLU    > 
 
KERBm  3*FOUND in 3elq  size =    3  ^    ARYLSULFATE SULFOTRANSFERASE;                           #    2                            
  RMSD =     1.12 A
  TRANSFORM    0.3101  0.8756 -0.3703 -0.8942  0.1364 -0.4264  0.3228 -0.4634 -0.8253     5.647     7.696    37.232              
         T  <A  34   THR    > matches  <A  82   THR    >                        ( 11.1 A from   CL    CL A5002  )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        ( 12.4 A from   CL    CL A5002  )
         E  <A 124   GLU    > matches  <A 183   GLU    >                        ( 12.5 A from   CL    CL A5004  )
 
KERBm  3*FOUND in 3rpx  size =    3  ^    COMPLEMENT COMPONENT 1 Q SUBCOMPONENT-BINDING PROTE     #    1                            
  RMSD =     1.12 A
  TRANSFORM    0.4563 -0.6775 -0.5769  0.4450 -0.3876  0.8073  0.7705  0.6251 -0.1246    19.207   -31.691   -29.035              
         T  <A  34   THR    > matches  <A 130   THR    >                        ( 14.0 A from   UNK  UNX A  55  )
         K  <A  60   LYS    > matches  <A 128   LYS    >                        ( 12.4 A from   UNK  UNX A  55  )
         E  <A 124   GLU    > matches  <A 264   GLU    >                        ( 24.2 A from   UNK  UNX A  60  )
 
KERBm  3*FOUND in 4tsh  size =    3  ^    SURFACE PROTEIN ADHESIN;                                #    2                            
  RMSD =     1.12 A
  TRANSFORM    0.6688 -0.1694  0.7239  0.5450  0.7740 -0.3224  0.5057 -0.6101 -0.6099    52.353   -45.948    39.964              
         T  <A  34   THR    > matches  <B1478   THR    >                        ( 24.2 A from   MG    MG B1503  )
         K  <A  60   LYS    > matches  <B1382   LYS    >                        ( 24.9 A from   MG    MG B1503  )
         E  <A 124   GLU    > matches  <B1472   GLU    >                        ( 38.9 A from   MG    MG B1503  )
 
KERBm  3*FOUND in 3b55  size =    3  ^    SUCCINOGLYCAN BIOSYNTHESIS PROTEIN;                     #    1                            
  RMSD =     1.12 A
  TRANSFORM   -0.2724  0.7163 -0.6425 -0.6017 -0.6478 -0.4672  0.7508 -0.2594 -0.6074    51.028    58.859    35.184              
         T  <A  34   THR    > matches  <A 267   THR    >                        ( 21.1 A from   CA    CA A 501  )
         K  <A  60   LYS    > matches  <A 282   LYS    >                        ( 19.7 A from   CA    CA A 501  )
         E  <A 124   GLU    > matches  <A 240   GLU    >                        ( 35.5 A from   CA    CA A 501  )
 
KERBm  3*FOUND in 5xyr  size =    3  ^    CHEMOKINE PROTEASE C;                                   #    1                            
  RMSD =     1.12 A
  TRANSFORM    0.9461  0.2053  0.2503 -0.1364  0.9540 -0.2670  0.2936 -0.2185 -0.9306    61.531    -5.924    37.665              
         T  <A  34   THR    > matches  <A1539   THR    >                        ( 18.2 A from    O1B MLA A1706  )
         K  <A  60   LYS    > matches  <A1557   LYS    >                        ( 20.3 A from    C2  MLA A1706  )
         E  <A 124   GLU    > matches  <A1465   GLU    >                        ( 27.7 A from    O1B MLA A1706  )
 
KERBm  3*FOUND in 2vea  size =    3  ^    PHYTOCHROME-LIKE PROTEIN CPH1;                          #    1                            
  RMSD =     1.12 A
  TRANSFORM    0.0783  0.9864  0.1444  0.9913 -0.0924  0.0938 -0.1058 -0.1358  0.9851    40.022    33.980    34.218              
         T  <A  34   THR    > matches  <A 447   THR    >                        ( 19.5 A from    CAB CYC A1521  )
         K  <A  60   LYS    > matches  <A 479   LYS    >                        ( 18.6 A from    CAB CYC A1521  )
         E  <A 124   GLU    > matches  <A 493   GLU    >                        ( 28.5 A from    CMB CYC A1521  )
 
KERBm  3*FOUND in 4qkw  size =    3  ^    MUSCLE-RELATED COILED-COIL PROTEIN;                     #    1                            
  RMSD =     1.12 A
  TRANSFORM    0.7319 -0.6130  0.2975 -0.2686  0.1417  0.9528  0.6262  0.7772  0.0609   -12.438   -56.886   -11.576              
         T  <A  34   THR    > matches  <A  75   THR    >                        ( 56.0 A from   CL    CL A 201  )
         K  <A  60   LYS    > matches  <A  79   LYS    >                        ( 52.0 A from   CL    CL A 201  )
         E  <A 124   GLU    > matches  <A  62   GLU    >                        ( 73.2 A from   CL    CL A 201  )
 
KERBm  3*FOUND in 2jke  size =    3  ^    ALPHA-GLUCOSIDASE (ALPHA-GLUCOSIDASE SUSB);             #    2                            
  RMSD =     1.12 A
  TRANSFORM   -0.2949  0.2140  0.9313  0.3434  0.9332 -0.1057  0.8917 -0.2886  0.3487   -34.281   -43.034   -26.963              
         T  <A  34   THR    > matches  <A 370   THR    >                        ( 13.2 A from    O1  EDO A1731  )
         K  <A  60   LYS    > matches  <A 374   LYS    >                        ( 15.8 A from    O1  EDO A1731  )
         E  <A 124   GLU    > matches  <A 346   GLU    >                        ( 22.5 A from    O1  EDO A1731  )
 
KERBm  3*FOUND in 6bs6  size =    3  ^    ALPHA-AMYLASE SUSG;                                     #    1                            
  RMSD =     1.12 A
  TRANSFORM    0.4920 -0.8390  0.2323  0.3364 -0.0629 -0.9396 -0.8030 -0.5404 -0.2513    92.364     3.096    84.575              
         T  <A  34   THR    > matches  <A 466   THR    >                        (  3.5 A from    O6  GLC A 718s )
         K  <A  60   LYS    > matches  <A 624   LYS    >                        (  4.2 A from    O6  GLC A 718  )
         E  <A 124   GLU    > matches  <A 499   GLU    >                        (  6.6 A from    O6  GLC A 705  )
 
KERBm  3*FOUND in 3gmx  size =    3  ^    BLP;                                                    #    1                            
  RMSD =     1.12 A
  TRANSFORM    0.6794 -0.4730  0.5610  0.2989  0.8766  0.3770  0.6702  0.0884 -0.7369     3.777     5.786    42.720              
         T  <A  34   THR    > matches  <A  81   THR    >                        ( 23.4 A from    OXT ACT A 156  )
         K  <A  60   LYS    > matches  <A  84   LYS    >                        ( 27.1 A from    OXT ACT A 156  )
         E  <A 124   GLU    > matches  <A  68   GLU    >                        ( 15.1 A from    OXT ACT A 156  )
 
KERBm  3*FOUND in 5luz  size =    3  ^    NEUROLYSIN, MITOCHONDRIAL;                              #    5                            
  RMSD =     1.13 A
  TRANSFORM    0.0077 -0.0311  0.9995  0.1530 -0.9877 -0.0319 -0.9882 -0.1532  0.0028     0.321    -7.181    37.585              
         T  <A  34   THR    > matches  <A 345   THR    >                        ( 26.4 A from   ZN    ZN A1001  )
         K  <A  60   LYS    > matches  <A 349   LYS    >                        ( 29.4 A from   ZN    ZN A1001  )
         E  <A 124   GLU    > matches  <A 242   GLU    >                        ( 25.4 A from   ZN    ZN A1001  )
 
KERBm  3*FOUND in 3pz6  size =    3  ^    LEUCYL-TRNA SYNTHETASE;                                 #    3                            
  RMSD =     1.13 A
  TRANSFORM    0.5517 -0.7868 -0.2768 -0.8292 -0.4816 -0.2837 -0.0899 -0.3861  0.9181    -0.155    65.849    -5.926              
         T  <A  34   THR    > matches  <A 424   THR    > 
         K  <A  60   LYS    > matches  <A 426   LYS    > 
         E  <A 124   GLU    > matches  <A 494   GLU    > 
 
KERBm  3*FOUND in 5yqi  size =    3  ^    MEMBRANE-ANCHORED LIPID-BINDING PROTEIN YSP2;           #    1                            
  RMSD =     1.13 A
  TRANSFORM    0.2660  0.7356  0.6230 -0.3068  0.6773 -0.6687  0.9139  0.0133 -0.4058    26.982    -3.265     2.344              
         T  <A  34   THR    > matches  <A 974   THR    > 
         K  <A  60   LYS    > matches  <A 972   LYS    > 
         E  <A 124   GLU    > matches  <A 992   GLU    > 
 
KERBm  3*FOUND in 2g3m  size =    3  ^    ALPHA-GLUCOSIDASE;                                      #    2                            
  RMSD =     1.13 A
  TRANSFORM   -0.2490  0.8735  0.4184 -0.4302  0.2872 -0.8558  0.8677  0.3931 -0.3043   -81.097    79.532   -29.939              
         T  <A  34   THR    > matches  <A 632   THR    > 
         K  <A  60   LYS    > matches  <A 639   LYS    > 
         E  <A 124   GLU    > matches  <A 160   GLU    > 
 
KERBm  3*FOUND in 4m3h  size =    3  ^    COPPER OXIDASE;                                         #    1                            
  RMSD =     1.13 A
  TRANSFORM   -0.2618  0.3770 -0.8884 -0.1342 -0.9258 -0.3534  0.9557 -0.0267 -0.2930    49.636    30.471    22.031              
         T  <A  34   THR    > matches  <A  91   THR    >                        ( 21.8 A from   CU  A CU A 404  )
         K  <A  60   LYS    > matches  <A  66   LYS    >                        ( 25.4 A from   CU  A CU A 404  )
         E  <A 124   GLU    > matches  <A 160   GLU    >                        ( 11.5 A from   CU  A CU A 404  )
 
KERBm  3*FOUND in 4cp6  size =    3  ^    CHOLINE BINDING PROTEIN PCPA;                           #    1                            
  RMSD =     1.13 A
  TRANSFORM   -0.7650  0.6432 -0.0319 -0.0386 -0.0952 -0.9947  0.6429  0.7597 -0.0977    44.787     0.227     3.926              
         T  <A  34   THR    > matches  <A 262   THR    > 
         K  <A  60   LYS    > matches  <A 283   LYS    > 
         E  <A 124   GLU    > matches  <A 201   GLU    > 
 
KERBm  3*FOUND in 2v03  size =    3  ^    CYSTEINE SYNTHASE B;                                    #    1                            
  RMSD =     1.13 A
  TRANSFORM    0.9832  0.1050 -0.1495 -0.1121 -0.2994 -0.9475  0.1442 -0.9483  0.2826    -3.237     1.978    27.963              
         T  <A  34   THR    > matches  <A  72   THR    >                        ( -3.8 A from    O2 ACIT A1297s )
         K  <A  60   LYS    > matches  <A  41   LYS    >                        (  1.3 A from    C4A PLP A1041s )
         E  <A 124   GLU    > matches  <A 128   GLU    >                        ( 19.0 A from    O2 ACIT A1297  )
 
KERBm  3*FOUND in 5luz  size =    3  ^    NEUROLYSIN, MITOCHONDRIAL;                              #    1                            
  RMSD =     1.13 A
  TRANSFORM   -0.5267 -0.8067  0.2679  0.6558 -0.1851  0.7319  0.5408 -0.5612 -0.6265    19.479   -34.245     4.998              
         T  <A  34   THR    > matches  <A 247   THR    >                        ( 26.6 A from   ZN    ZN A1001  )
         K  <A  60   LYS    > matches  <A 250   LYS    >                        ( 29.8 A from   ZN    ZN A1001  )
         E  <A 124   GLU    > matches  <A 196   GLU    >                        ( 36.9 A from   ZN    ZN A1001  )
 
KERBm  3*FOUND in 5fod  size =    3  ^    LEUCYL-TRNA SYNTHETASE;                                 #    1                            
  RMSD =     1.13 A
  TRANSFORM   -0.5046 -0.5950  0.6256 -0.5807 -0.3023 -0.7559 -0.6389  0.7447  0.1929     6.860     4.050    23.507              
         T  <A  34   THR    > matches  <A 543   THR    > 
         K  <A  60   LYS    > matches  <A 549   LYS    > 
         E  <A 124   GLU    > matches  <A 275   GLU    > 
 
KERBm  3*FOUND in 1gl2  size =    3  ^    ENDOBREVIN;                                             #    1                            
  RMSD =     1.14 A
  TRANSFORM    0.5286 -0.5664 -0.6323  0.7737  0.0150  0.6333  0.3492  0.8240 -0.4462    35.008    -9.844     2.169              
         T  <A  34   THR    > matches  <A  59   THR    > 
         K  <A  60   LYS    > matches  <A  63   LYS    > 
         E  <A 124   GLU    > matches  <A  48   GLU    > 
 
KERBm  3*FOUND in 1ka2  size =    3  ^    M32 CARBOXYPEPTIDASE;                                   #    1                            
  RMSD =     1.14 A
  TRANSFORM    0.4031 -0.0535  0.9136 -0.8687  0.2918  0.4003  0.2880  0.9550 -0.0712   -79.102   -12.983   107.649              
         T  <A  34   THR    > matches  <A 111   THR    >                        ( 27.2 A from   MG    MG A 501  )
         K  <A  60   LYS    > matches  <A 137   LYS    >                        ( 31.5 A from   MG    MG A 501  )
         E  <A 124   GLU    > matches  <A  52   GLU    >                        ( 30.9 A from   MG    MG A 501  )
 
KERBm  3*FOUND in 4ecg  size =    3  ^    PUTATIVE IRON-REGULATED PROTEIN A;                      #    1                            
  RMSD =     1.14 A
  TRANSFORM    0.0399 -0.9972  0.0636  0.5722  0.0750  0.8167  0.8191 -0.0038 -0.5736     9.658   -55.452   -57.067              
         T  <A  34   THR    > matches  <A 392   THR    >                        ( 16.3 A from   CA    CA A 506  )
         K  <A  60   LYS    > matches  <A  39   LYS    >                        ( 17.4 A from   CA    CA A 506  )
         E  <A 124   GLU    > matches  <A 114   GLU    >                        ( -3.2 A from   CA    CA A 504s )
 
KERBm  3*FOUND in 2x5p  size =    3  ^    FIBRONECTIN BINDING PROTEIN;                            #    4                            
  RMSD =     1.14 A
  TRANSFORM   -0.5995 -0.7941  0.1000  0.7933 -0.6061 -0.0573 -0.1062 -0.0450 -0.9933    81.107   -39.472    34.410              
         T  <A  34   THR    > matches  <A  74   THR    > 
         K  <A  60   LYS    > matches  <A  72   LYS    > 
         E  <A 124   GLU    > matches  <A  85   GLU    > 
 
KERBm  3*FOUND in 2o3i  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.14 A
  TRANSFORM    0.2672  0.9228 -0.2777 -0.8675  0.3558  0.3476 -0.4196 -0.1480 -0.8956   -15.521    13.920    29.558              
         T  <A  34   THR    > matches  <A  46   THR    > 
         K  <A  60   LYS    > matches  <A  40   LYS    > 
         E  <A 124   GLU    > matches  <A  56   GLU    > 
 
KERBm  3*FOUND in 2xmx  size =    3  ^    COLICIN-M;                                              #    1                            
  RMSD =     1.14 A
  TRANSFORM    0.1074  0.3888  0.9151 -0.1896  0.9115 -0.3650  0.9760  0.1343 -0.1716    15.974    28.414     7.140              
         T  <A  34   THR    > matches  <A 200   THR    >                        (  7.2 A from    O1  GOL A1275  )
         K  <A  60   LYS    > matches  <A 180   LYS    >                        ( -7.1 A from    O1  GOL A1275s )
         E  <A 124   GLU    > matches  <A 254   GLU    >                        ( 17.9 A from    O3  CO3 A1274  )
 
KERBm  3*FOUND in 2h2w  size =    3  ^    HOMOSERINE O-SUCCINYLTRANSFERASE;                       #    1                            
  RMSD =     1.14 A
  TRANSFORM   -0.6667 -0.5345 -0.5195 -0.5308 -0.1487  0.8343  0.5232 -0.8320  0.1846    44.636     6.552    -3.583              
         T  <A  34   THR    > matches  <A  74   THR    > 
         K  <A  60   LYS    > matches  <A  76   LYS    > 
         E  <A 124   GLU    > matches  <A 129   GLU    > 
 
KERBm  3*FOUND in 4j34  size =    3  ^    KYNURENINE 3-MONOOXYGENASE;                             #    2                            
  RMSD =     1.14 A
  TRANSFORM    0.6528 -0.7572  0.0225 -0.3077 -0.2379  0.9213  0.6922  0.6083  0.3883    79.410    -0.896   -47.858              
         T  <A  34   THR    > matches  <A 358   THR    >                        ( 19.9 A from    O2P FAD A 401  )
         K  <A  60   LYS    > matches  <A 361   LYS    >                        ( 22.9 A from    O2  FAD A 401  )
         E  <A 124   GLU    > matches  <A  24   GLU    >                        ( 20.8 A from    O1P FAD A 401  )
 
KERBm  3*FOUND in 5fbk  size =    3  ^    EXTRACELLULAR CALCIUM-SENSING RECEPTOR;                 #    1                            
  RMSD =     1.14 A
  TRANSFORM    0.7864  0.5551  0.2708  0.0960 -0.5430  0.8343 -0.6102  0.6301  0.4803    56.771   -37.400   -15.327              
         T  <A  34   THR    > matches  <A 195   THR    >                        ( 15.0 A from    N   CSO A 236  )
         K  <A  60   LYS    > matches  <A 225   LYS    >                        ( 13.0 A from    OD  CSO A 482  )
         E  <A 124   GLU    > matches  <A 525   GLU    >                        ( 19.8 A from    O6  NAG A 602  )
 
KERBm  3*FOUND in 1qcx  size =    3  ^    PECTIN LYASE B;                                         #    1                            
  RMSD =     1.14 A
  TRANSFORM    0.8903 -0.3141 -0.3296 -0.4547 -0.5754 -0.6798 -0.0239 -0.7552  0.6551    11.692    40.979    41.186              
         T  <A  34   THR    > matches  <A  61   THR    > 
         K  <A  60   LYS    > matches  <A  91   LYS    > 
         E  <A 124   GLU    > matches  <A  55   GLU    > 
 
KERBm  3*FOUND in 5bo8  size =    3  ^    SIA-ALPHA-2,3-GAL-BETA-1,4-GLCNAC-R:ALPHA 2,8-          #    1                            
  RMSD =     1.14 A
  TRANSFORM   -0.4144  0.8849  0.2126  0.8911  0.4420 -0.1031  0.1852 -0.1467  0.9717    15.699   -97.475   -94.895              
         T  <A  34   THR    > matches  <A 375   THR    >                        ( 14.5 A from    C6  NAG A 403  )
         K  <A  60   LYS    > matches  <A 373   LYS    >                        ( 10.0 A from    C6  NAG A 403  )
         E  <A 124   GLU    > matches  <A 332   GLU    >                        ( 34.1 A from    C8  NAG A 402  )
 
KERBm  3*FOUND in 3wdh  size =    3  ^    TYPE I PULLULANASE;                                     #    1                            
  RMSD =     1.14 A
  TRANSFORM    0.5010 -0.3900  0.7726  0.3199 -0.7460 -0.5841 -0.8041 -0.5398  0.2490    -1.393   -36.368     7.189              
         T  <A  34   THR    > matches  <A 171   THR    >                        ( 16.2 A from   CA    CA A 801  )
         K  <A  60   LYS    > matches  <A 135   LYS    >                        ( 19.4 A from   CA    CA A 801  )
         E  <A 124   GLU    > matches  <A 308   GLU    >                        ( -2.9 A from   CA    CA A 801s )
 
KERBm  3*FOUND in 1ydx  size =    3  ^    TYPE I RESTRICTION ENZYME SPECIFICITY PROTEIN MG438     #    2                            
  RMSD =     1.14 A
  TRANSFORM   -0.1052  0.9289  0.3550  0.5010 -0.2589  0.8258 -0.8590 -0.2647  0.4382   -31.221     4.828    41.700              
         T  <A  34   THR    > matches  <A  90   THR    >                        ( 25.4 A from   CL    CL A 384  )
         K  <A  60   LYS    > matches  <A  25   LYS    >                        ( 27.6 A from   CL    CL A 384  )
         E  <A 124   GLU    > matches  <A 161   GLU    >                        ( 28.7 A from   CL    CL A 385  )
 
KERBm  3*FOUND in 2d3a  size =    3  ^    GLUTAMINE SYNTHETASE;                                   #    2                            
  RMSD =     1.14 A
  TRANSFORM   -0.5601  0.8275  0.0396  0.3011  0.1588  0.9403 -0.7718 -0.5386  0.3381    41.145   -65.787     3.165              
         T  <A  34   THR    > matches  <A  39   THR    >                        ( 35.6 A from    O3' ADP A6001  )
         K  <A  60   LYS    > matches  <A  18   LYS    >                        ( 40.4 A from    O3' ADP A6001  )
         E  <A 124   GLU    > matches  <A  69   GLU    >                        ( 39.8 A from    O3' ADP A6001  )
 
KERBm  3*FOUND in 3shg  size =    3  ^    VBHT;                                                   #    1                            
  RMSD =     1.14 A
  TRANSFORM   -0.1725  0.4563 -0.8729  0.4089 -0.7731 -0.4849  0.8961  0.4406  0.0532    33.348   -34.559    22.697              
         T  <A  34   THR    > matches  <A  78   THR    >                        ( 12.6 A from    O11 TLA A 400  )
         K  <A  60   LYS    > matches  <A  61   LYS    >                        ( 16.2 A from    O11 TLA A 400  )
         E  <A 124   GLU    > matches  <A   5   GLU    >                        ( -3.4 A from    O2  TLA A 401s )
 
KERBm  3*FOUND in 4c2m  size =    3  ^    DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190;           #    2                            
  RMSD =     1.14 A
  TRANSFORM    0.7406  0.6396 -0.2059  0.4338 -0.6891 -0.5804  0.5131 -0.3406  0.7879   -44.914   137.737  -110.249              
         T  <A  34   THR    > matches  <B 515   THR    >                        ( 23.2 A from    O4  SO4 B2204  )
         K  <A  60   LYS    > matches  <B 519   LYS    >                        ( 22.4 A from    O4  SO4 B2204  )
         E  <A 124   GLU    > matches  <A1393   GLU    >                        ( 36.5 A from    O4  SO4 B2204  )
 
KERBm  3*FOUND in 5ere  size =    3  ^    EXTRACELLULAR LIGAND-BINDING RECEPTOR;                  #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.8158  0.5402 -0.2067 -0.5414 -0.8389 -0.0555  0.2034 -0.0666 -0.9768    33.148    20.530    58.993              
         T  <A  34   THR    > matches  <A 591   THR    >                        ( 16.4 A from    O   ACY A 603  )
         K  <A  60   LYS    > matches  <A 572   LYS    >                        ( 19.6 A from    O1  EDO A 607  )
         E  <A 124   GLU    > matches  <A 366   GLU    >                        ( 13.2 A from    O   ACY A 603  )
 
KERBm  3*FOUND in 2v0o  size =    3  ^    FCH DOMAIN ONLY PROTEIN 2;                              #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.2742 -0.2842 -0.9187  0.9418  0.1141 -0.3163 -0.1947  0.9520 -0.2363    63.216   -55.729    27.957              
         T  <A  34   THR    > matches  <A  54   THR    >                        ( 11.8 A from    OXT ACT A1275  )
         K  <A  60   LYS    > matches  <A  58   LYS    >                        ( 14.9 A from    OXT ACT A1275  )
         E  <A 124   GLU    > matches  <A  41   GLU    >                        ( 24.5 A from    OXT ACT A1275  )
 
KERBm  3*FOUND in 1nuw  size =    3  ^    FRUCTOSE-1,6-BISPHOSPHATASE;                            #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.2253 -0.6760  0.7016  0.8888  0.1523  0.4322  0.3990 -0.7210 -0.5665    29.832   -22.142    32.205              
         T  <A  34   THR    > matches  <A1039   THR    >                        ( 19.9 A from   MG    MG A2497  )
         K  <A  60   LYS    > matches  <A1042   LYS    >                        ( 22.1 A from   MG    MG A2497  )
         E  <A 124   GLU    > matches  <A1106   GLU    >                        ( 23.9 A from   MG    MG A2499  )
 
KERBm  3*FOUND in 2anr  size =    3  ^    5'-R(*CP*(5BU)                                          #    1                            
  RMSD =     1.15 A
  TRANSFORM    0.9326  0.2120 -0.2920  0.2073  0.3477  0.9144 -0.2954  0.9133 -0.2803   -34.564   -26.420    28.993              
         T  <A  34   THR    > matches  <A  61   THR    > 
         K  <A  60   LYS    > matches  <A   3+  LYS    > 
         E  <A 124   GLU    > matches  <A  74   GLU    > 
 
KERBm  3*FOUND in 2oqe  size =    3  ^    PEROXISOMAL COPPER AMINE OXIDASE;                       #    5                            
  RMSD =     1.15 A
  TRANSFORM    0.3725  0.1219 -0.9200  0.2413 -0.9700 -0.0308  0.8961  0.2106  0.3907    -8.348    -7.906   -56.277              
         T  <A  34   THR    > matches  <A 665   THR    >                        ( 36.6 A from    O2  GOL A4019  )
         K  <A  60   LYS    > matches  <A 669   LYS    >                        ( 42.9 A from    O2  GOL A4019  )
         E  <A 124   GLU    > matches  <A 651   GLU    >                        ( 24.8 A from   XE    XE A 903  )
 
KERBm  3*FOUND in 4l1d  size =    3  ^    SODIUM CHANNEL SUBUNIT BETA-3;                          #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.1486 -0.4557  0.8776 -0.4472  0.8225  0.3513  0.8820  0.3403  0.3261   -73.005   -45.187   -69.296              
         T  <A  34   THR    > matches  <A 114   THR    > 
         K  <A  60   LYS    > matches  <A 112   LYS    > 
         E  <A 124   GLU    > matches  <A  10   GLU    > 
 
KERBm  3*FOUND in 5hqa  size =    3  ^    ALPHA-GLUCOSIDASE;                                      #    2                            
  RMSD =     1.15 A
  TRANSFORM   -0.5711  0.0765 -0.8173 -0.7768  0.2714  0.5682 -0.2652 -0.9594  0.0956   131.207   141.617    71.470              
         T  <A  34   THR    > matches  <A 664   THR    >                        ( 10.5 A from    C   FMT A 710  )
         K  <A  60   LYS    > matches  <A 662   LYS    >                        ( 15.9 A from    C   FMT A 710  )
         E  <A 124   GLU    > matches  <A 612   GLU    >                        (  3.8 A from   MG    MG A 704  )
 
KERBm  3*FOUND in 1bhe  size =    3  ^    POLYGALACTURONASE;                                      #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.9001 -0.4301 -0.0698 -0.3362  0.7874 -0.5167 -0.2771  0.4416  0.8533    82.655    31.841   -36.183              
         T  <A  34   THR    > matches  <A 237   THR    > 
         K  <A  60   LYS    > matches  <A 210   LYS    > 
         E  <A 124   GLU    > matches  <A 315   GLU    > 
 
KERBm  3*FOUND in 4fxy  size =    3  ^    NEUROLYSIN, MITOCHONDRIAL;                              #    4                            
  RMSD =     1.15 A
  TRANSFORM   -0.1532 -0.7805 -0.6061  0.0382  0.6082 -0.7929 -0.9875  0.1447  0.0633    56.096    57.694    95.052              
         T  <A  34   THR    > matches  <P 345   THR    >                        ( 26.7 A from   ZN    ZN P 702  )
         K  <A  60   LYS    > matches  <P 349   LYS    >                        ( 30.2 A from   ZN    ZN P 702  )
         E  <A 124   GLU    > matches  <P 242   GLU    >                        ( 27.8 A from   ZN    ZN P 702  )
 
KERBm  3*FOUND in 4rgz  size =    3  ^    XAA-PRO AMINOPEPTIDASE;                                 #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.6084 -0.7182 -0.3378 -0.7228  0.3256  0.6096  0.3278 -0.6150  0.7172   143.602   -26.602    61.550              
         T  <A  34   THR    > matches  <1  95   THR    >                        ( 42.7 A from    O3  PO4 1 402  )
         K  <A  60   LYS    > matches  <1  98   LYS    >                        ( 44.8 A from    O3  PO4 1 402  )
         E  <A 124   GLU    > matches  <1  70   GLU    >                        ( 40.3 A from   ZN    ZN 1 401  )
 
KERBm  3*FOUND in 3lyy  size =    3  ^    ADHESION EXOPROTEIN;                                    #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.7100 -0.3865  0.5887 -0.5125 -0.2898 -0.8083 -0.4830  0.8756 -0.0077    52.731    13.910    29.479              
         T  <A  34   THR    > matches  <A  88   THR    > 
         K  <A  60   LYS    > matches  <A  90   LYS    > 
         E  <A 124   GLU    > matches  <A  41   GLU    > 
 
KERBm  3*FOUND in 4ogg  size =    3  ^    PROTEIN DJ-1 HOMOLOG D;                                 #    1                            
  RMSD =     1.15 A
  TRANSFORM    0.1611  0.9015  0.4016 -0.8308  0.3435 -0.4378  0.5327  0.2631 -0.8044    16.253    50.615    23.397              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 13.7 A from    O   CGV A 120  )
         K  <A  60   LYS    > matches  <A 107   LYS    >                        ( 19.4 A from    O   CGV A 120  )
         E  <A 124   GLU    > matches  <A 156   GLU    >                        ( 11.2 A from    O   CGV A 120  )
 
KERBm  3*FOUND in 1hm2  size =    3  ^    CHONDROITINASE AC;                                      #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.3435  0.8291 -0.4413  0.6533 -0.1266 -0.7464  0.6747  0.5446  0.4981    17.888    19.627   -32.440              
         T  <A  34   THR    > matches  <A 240   THR    >                        (  7.3 A from    O2  IDR A 710  )
         K  <A  60   LYS    > matches  <A 244   LYS    >                        (  9.5 A from    O4  IDR A 710  )
         E  <A 124   GLU    > matches  <A 371   GLU    >                        (  6.3 A from    C6  ASG A 712  )
 
KERBm  3*FOUND in 5z79  size =    3  ^    HYDROXYMETHYLDIHYDROPTERIN PYROPHOSPHOKINASE-           #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.6072  0.2958 -0.7374  0.7805  0.0483 -0.6233  0.1488  0.9540  0.2602     4.154    12.549    56.056              
         T  <A  34   THR    > matches  <A 509   THR    >                        ( 12.7 A from    C5  PAB A1103  )
         K  <A  60   LYS    > matches  <A 512   LYS    >                        ( 17.1 A from    O2' PAB A1103  )
         E  <A 124   GLU    > matches  <A 394   GLU    >                        (  9.9 A from   MG    MG A1104  )
 
KERBm  3*FOUND in 3dpi  size =    3  ^    NAD+ SYNTHETASE;                                        #    1                            
  RMSD =     1.15 A
  TRANSFORM    0.6788  0.5257  0.5127 -0.6481  0.1006  0.7549 -0.3453  0.8447 -0.4090    11.169   -35.700    55.768              
         T  <A  34   THR    > matches  <A 266   THR    >                        ( 36.7 A from    OXT ACT A 285  )
         K  <A  60   LYS    > matches  <A 269   LYS    >                        ( 35.4 A from    OXT ACT A 285  )
         E  <A 124   GLU    > matches  <A 247   GLU    >                        ( 35.9 A from    O   ACT A 285  )
 
KERBm  3*FOUND in 4rya  size =    3  ^    ABC TRANSPORTER SUBSTRATE BINDING PROTEIN (SORBITOL     #    2                            
  RMSD =     1.15 A
  TRANSFORM   -0.6980 -0.3619  0.6179  0.0279 -0.8759 -0.4816 -0.7155  0.3190 -0.6215    52.855    20.923    64.185              
         T  <A  34   THR    > matches  <A 378   THR    >                        (  8.9 A from    O   ACT A 502  )
         K  <A  60   LYS    > matches  <A 294   LYS    >                        ( -4.6 A from    CH3 ACT A 502s )
         E  <A 124   GLU    > matches  <A 394   GLU    >                        ( 18.5 A from    O5  MTL A 501  )
 
KERBm  3*FOUND in 2xfg  size =    3  ^    ENDOGLUCANASE 1;                                        #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.9213  0.2193 -0.3211  0.3208 -0.0381 -0.9464  0.2198  0.9749  0.0352    59.670    -3.662    30.229              
         T  <A  34   THR    > matches  <A  51   THR    >                        ( 26.5 A from   CL    CL A1450  )
         K  <A  60   LYS    > matches  <A 107   LYS    >                        ( 25.1 A from   CL    CL A1449  )
         E  <A 124   GLU    > matches  <B 496   GLU    >                        ( 35.3 A from   CA    CA B1619  )
 
KERBm  3*FOUND in 2om6  size =    3  ^    PROBABLE PHOSPHOSERINE PHOSPHATASE;                     #    1                            
  RMSD =     1.15 A
  TRANSFORM   -0.3574 -0.5152  0.7790  0.7771  0.2986  0.5540  0.5181 -0.8034 -0.2937    -9.429   -65.463    57.798              
         T  <A  34   THR    > matches  <A 118   THR    >                        ( 19.0 A from    O1  SO4 A1300  )
         K  <A  60   LYS    > matches  <A 112   LYS    >                        ( 23.3 A from    O1  SO4 A1300  )
         E  <A 124   GLU    > matches  <A 187   GLU    >                        ( -3.8 A from    O2  SO4 A1300s )
 
KERBm  3*FOUND in 4ind  size =    3  ^    C381 TURRET PROTEIN;                                    #    1                            
  RMSD =     1.15 A
  TRANSFORM    0.5457 -0.8242 -0.1514  0.6270  0.2817  0.7263  0.5560  0.4913 -0.6705    87.246  -142.430     2.541              
         T  <A  34   THR    > matches  <A 204   THR    >                        (  6.5 A from    O1  2HP A 402  )
         K  <A  60   LYS    > matches  <A 207+  LYS    >                        ( 10.7 A from    O1  2HP A 402  )
         E  <A 124   GLU    > matches  <A  77   GLU    >                        ( 10.0 A from    O2  2HP A 401  )
 
KERBm  3*FOUND in 5b66  size =    3  ^    PHOTOSYSTEM II PROTEIN D1;                              #    2                            
  RMSD =     1.15 A
  TRANSFORM    0.3925 -0.3671  0.8433 -0.1860 -0.9296 -0.3181 -0.9007  0.0320  0.4332   -49.163    25.156    20.510              
         T  <A  34   THR    > matches  <O 121   THR    >                        ( 10.3 A from    O   DMS O 304  )
         K  <A  60   LYS    > matches  <O 123   LYS    >                        ( 11.2 A from    C1  DMS U 902  )
         E  <A 124   GLU    > matches  <O  55   GLU    >                        ( 10.7 A from    C2  DMS O 305  )
 
KERBm  3*FOUND in 2y8n  size =    3  ^    4-HYDROXYPHENYLACETATE DECARBOXYLASE LARGE SUBUNIT;     #    1                            
  RMSD =     1.16 A
  TRANSFORM    0.7169  0.0173 -0.6970 -0.6739 -0.2391 -0.6991  0.1787 -0.9709  0.1597    58.966    72.313    77.462              
         T  <A  34   THR    > matches  <A 549   THR    >                        ( 56.2 A from    S4  SF4 B  88  )
         K  <A  60   LYS    > matches  <A 554   LYS    >                        ( 58.0 A from    S4  SF4 B  88  )
         E  <A 124   GLU    > matches  <A 572   GLU    >                        ( 68.3 A from    S4  SF4 B  88  )
 
KERBm  3*FOUND in 5cww  size =    3  ^    NUCLEOPORIN NUP145N;                                    #    1                            
  RMSD =     1.16 A
  TRANSFORM   -0.8125 -0.4677  0.3481 -0.5680  0.7696 -0.2917  0.1314  0.4347  0.8909    77.725   -41.528   -25.523              
         T  <A  34   THR    > matches  <B 472   THR    > 
         K  <A  60   LYS    > matches  <B 438   LYS    > 
         E  <A 124   GLU    > matches  <B 535   GLU    > 
 
KERBm  3*FOUND in 1dqa  size =    3  ^    PROTEIN (HMG-COA REDUCTASE);                            #    2                            
  RMSD =     1.16 A
  TRANSFORM   -0.9073 -0.4026 -0.1212  0.1225 -0.5290  0.8397  0.4022 -0.7470 -0.5293    33.375   -33.028    47.291              
         T  <A  34   THR    > matches  <A 689   THR    >                        ( 11.6 A from    C4N NAP A   1  )
         K  <A  60   LYS    > matches  <A 692   LYS    >                        ( -8.6 A from    C4N NAP A   1s )
         E  <A 124   GLU    > matches  <A 610   GLU    >                        ( 25.3 A from    O7N NAP A   1  )
 
KERBm  3*FOUND in 2o27  size =    3  ^    KIT LIGAND;                                             #    1                            
  RMSD =     1.16 A
  TRANSFORM   -0.0600 -0.9510 -0.3032  0.9007 -0.1825  0.3943  0.4303  0.2494 -0.8675    41.015    -8.353    31.240              
         T  <A  34   THR    > matches  <A  58   THR    > 
         K  <A  60   LYS    > matches  <A  62   LYS    > 
         E  <A 124   GLU    > matches  <A  91   GLU    > 
 
KERBm  3*FOUND in 5isw  size =    3  ^    GRAMICIDIN S SYNTHASE 1;                                #    1                            
  RMSD =     1.16 A
  TRANSFORM   -0.4530 -0.3796 -0.8066  0.8770 -0.3525 -0.3267  0.1603  0.8554 -0.4926    89.420   -10.294   -54.293              
         T  <A  34   THR    > matches  <A 864   THR    >                        ( -5.3 A from    H12 GOL A1200s )
         K  <A  60   LYS    > matches  <A 936   LYS    >                        (  6.0 A from    HO2 GOL A1200  )
         E  <A 124   GLU    > matches  <A 849   GLU    >                        ( 19.6 A from    HO1 GOL A1200  )
 
KERBm  3*FOUND in 3cdx  size =    3  ^    SUCCINYLGLUTAMATEDESUCCINYLASE/ASPARTOACYLASE;          #    1                            
  RMSD =     1.16 A
  TRANSFORM   -0.7740  0.0035 -0.6332 -0.4903  0.6294  0.6028 -0.4007 -0.7771  0.4855    25.038   -57.883    19.630              
         T  <A  34   THR    > matches  <A 197   THR    >                        (  8.9 A from   CA    CA A 401  )
         K  <A  60   LYS    > matches  <A 195+  LYS    >                        ( 13.7 A from   CA    CA A 401  )
         E  <A 124   GLU    > matches  <A  67   GLU    >                        ( 10.8 A from   CA    CA A 401  )
 
KERBm  3*FOUND in 3wyf  size =    3  ^    GSP1P;                                                  #    1                            
  RMSD =     1.16 A
  TRANSFORM    0.3290  0.8600  0.3900 -0.5050  0.5092 -0.6969  0.7979 -0.0323 -0.6019   -25.455     6.415     8.613              
         T  <A  34   THR    > matches  <B 308   THR    > 
         K  <A  60   LYS    > matches  <B 310+  LYS    > 
         E  <A 124   GLU    > matches  <B 210   GLU    > 
 
KERBm  3*FOUND in 2r4f  size =    3  ^    3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE;        #    2                            
  RMSD =     1.16 A
  TRANSFORM    0.6905 -0.4160  0.5918 -0.7150 -0.5167  0.4710 -0.1098  0.7483  0.6542   -31.065    37.183    24.433              
         T  <A  34   THR    > matches  <A 689   THR    >                        (  6.8 A from    O7  RIE A 876  )
         K  <A  60   LYS    > matches  <A 692   LYS    >                        ( -3.1 A from    O7  RIE A 876s )
         E  <A 124   GLU    > matches  <A 610   GLU    >                        ( 23.4 A from    O7  RIE A 876  )
 
KERBm  3*FOUND in 4jeh  size =    3  ^    SYNTAXIN-BINDING PROTEIN 1;                             #    3                            
  RMSD =     1.16 A
  TRANSFORM    0.9373  0.0606  0.3432  0.2558 -0.7884 -0.5595 -0.2366 -0.6122  0.7545     3.130    23.331     3.378              
         T  <A  34   THR    > matches  <A 479   THR    > 
         K  <A  60   LYS    > matches  <A 483   LYS    > 
         E  <A 124   GLU    > matches  <A 381   GLU    > 
 
KERBm  3*FOUND in 5hns  size =    3  ^    NIEMANN-PICK C1 PROTEIN;                                #    1                            
  RMSD =     1.16 A
  TRANSFORM   -0.6900  0.6428 -0.3327  0.5045  0.7568  0.4156 -0.5189 -0.1189  0.8465    86.383  -101.181     1.523              
         T  <A  34   THR    > matches  <A 604   THR    >                        ( 13.9 A from    S   SCN A 713  )
         K  <A  60   LYS    > matches  <A 392   LYS    >                        (  9.2 A from    S   SCN A 713  )
         E  <A 124   GLU    > matches  <A 586   GLU    >                        ( 21.0 A from    C8  NAG A 708  )
 
KERBm  3*FOUND in 3ghg  size =    3  ^    FIBRINOGEN ALPHA CHAIN;                                 #    2                            
  RMSD =     1.16 A
  TRANSFORM   -0.5556  0.7356  0.3876  0.7036  0.1675  0.6906 -0.4431 -0.6564  0.6106   -36.113    73.525   -29.535              
         T  <A  34   THR    > matches  <B 280   THR    >                        ( 43.8 A from   CA    CA B 501  )
         K  <A  60   LYS    > matches  <B 283   LYS    >                        ( 49.7 A from   CA    CA B 501  )
         E  <A 124   GLU    > matches  <B 315   GLU    >                        ( 30.7 A from    O8  SIA B 479  )
 
KERBm  3*FOUND in 4l7g  size =    3  ^    BETA-SECRETASE 1;                                       #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.7357  0.6350 -0.2356 -0.6628  0.7465 -0.0576 -0.1393 -0.1986 -0.9701     9.953     2.463    46.707              
         T  <A  34   THR    > matches  <A 329   THR    >                        (  9.3 A from    C11 1W0 A 501  )
         K  <A  60   LYS    > matches  <A 224   LYS    >                        (  9.5 A from    O10 1W0 A 501  )
         E  <A 124   GLU    > matches  <A 265   GLU    >                        ( 14.2 A from    N21 1W0 A 501  )
 
KERBm  3*FOUND in 1xmx  size =    3  ^    HYPOTHETICAL PROTEIN VC1899;                            #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.9049  0.3836 -0.1844 -0.4253  0.8305 -0.3597 -0.0152 -0.4039 -0.9147   -32.304   -24.384   -14.501              
         T  <A  34   THR    > matches  <A 194   THR    >                        ( 16.2 A from    O1  FMT A 407  )
         K  <A  60   LYS    > matches  <A 198   LYS    >                        ( 19.9 A from    O1  FMT A 407  )
         E  <A 124   GLU    > matches  <A 215   GLU    >                        ( -4.2 A from    O2  FMT A 407s )
 
KERBm  3*FOUND in 1tmo  size =    3  ^    TRIMETHYLAMINE N-OXIDE REDUCTASE;                       #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.3364 -0.1353  0.9319  0.6120 -0.7207 -0.3256 -0.7157 -0.6799  0.1597     5.600    13.303    91.310              
         T  <A  34   THR    > matches  <A  11   THR    >                        ( 19.1 A from    O6  2MD A 799  )
         K  <A  60   LYS    > matches  <A  20   LYS    >                        ( 22.8 A from    O6  2MD A 799  )
         E  <A 124   GLU    > matches  <A 553   GLU    >                        ( 20.5 A from    O6  2MD A 799  )
 
KERBm  3*FOUND in 5gj7  size =    3  ^    ACYL-COA DEHYDROGENASE TYPE 2 DOMAIN PROTEIN;           #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.4774 -0.1947  0.8569 -0.6252 -0.7604  0.1756 -0.6174  0.6195  0.4847   -63.560   184.108   115.668              
         T  <A  34   THR    > matches  <A 334   THR    > 
         K  <A  60   LYS    > matches  <A 330   LYS    > 
         E  <A 124   GLU    > matches  <A 360   GLU    > 
 
KERBm  3*FOUND in 2czr  size =    3  ^    TBP-INTERACTING PROTEIN;                                #    1                            
  RMSD =     1.17 A
  TRANSFORM   -0.8074 -0.2690  0.5251 -0.5889  0.4232 -0.6886  0.0370  0.8652  0.5000    63.805   -74.063    -0.972              
         T  <A  34   THR    > matches  <A  32   THR    >                        ( 14.0 A from    O1  GOL A1002  )
         K  <A  60   LYS    > matches  <A  41   LYS    >                        ( 10.9 A from    C1  GOL A1002  )
         E  <A 124   GLU    > matches  <A   4   GLU    >                        ( 33.6 A from    O3  GOL A1001  )
 
KERBm  3*FOUND in 3dsm  size =    3  ^    UNCHARACTERIZED PROTEIN BACUNI_02894;                   #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.4634 -0.4524  0.7619 -0.6966 -0.7174 -0.0022 -0.5476  0.5298  0.6476    10.771    30.181    -8.152              
         T  <A  34   THR    > matches  <A  32   THR    >                        ( -4.5 A from   CL    CL A 345s )
         K  <A  60   LYS    > matches  <A  55   LYS    >                        (  8.0 A from   CL    CL A 345  )
         E  <A 124   GLU    > matches  <A 321   GLU    >                        ( 22.3 A from   CL    CL A 345  )
 
KERBm  3*FOUND in 2v7b  size =    3  ^    BENZOATE-COENZYME A LIGASE;                             #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.0654  0.9727  0.2226 -0.9012 -0.0382  0.4317 -0.4284  0.2289 -0.8741   -35.213    40.093    44.610              
         T  <A  34   THR    > matches  <A 253   THR    >                        ( 21.6 A from    C4  BEZ A1529  )
         K  <A  60   LYS    > matches  <A  39   LYS    >                        ( 23.8 A from    C4  BEZ A1529  )
         E  <A 124   GLU    > matches  <A 259   GLU    >                        ( 23.0 A from    C6  BEZ A1529  )
 
KERBm  3*FOUND in 5d6j  size =    3  ^    ACYL-COA SYNTHASE;                                      #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.5360 -0.7938  0.2873  0.0168  0.3502  0.9365  0.8440  0.4972 -0.2011    47.400   -17.788    37.132              
         T  <A  34   THR    > matches  <A 354   THR    >                        (  9.4 A from    N6  ATP A 702  )
         K  <A  60   LYS    > matches  <A 340   LYS    >                        ( 12.9 A from    N6  ATP A 702  )
         E  <A 124   GLU    > matches  <A 411   GLU    >                        ( 19.2 A from    O3' ATP A 702  )
 
KERBm  3*FOUND in 6er1  size =    3  ^    CENTROSOME-ASSOCIATED ZINC FINGER PROTEIN CP190;        #    1                            
  RMSD =     1.17 A
  TRANSFORM   -0.5693  0.1627  0.8058  0.6323 -0.5398  0.5557 -0.5254 -0.8260 -0.2044     0.530    30.697    10.009              
         T  <A  34   THR    > matches  <A 113   THR    >                        ( 18.9 A from    O1  PO4 A 201  )
         K  <A  60   LYS    > matches  <A 117   LYS    >                        ( 15.4 A from    O1  PO4 A 201  )
         E  <A 124   GLU    > matches  <A  60   GLU    >                        ( 38.0 A from    O4  PO4 A 201  )
 
KERBm  3*FOUND in 3i2k  size =    3  ^    COCAINE ESTERASE;                                       #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.3105  0.9481 -0.0683  0.9410 -0.3168 -0.1194  0.1348  0.0272  0.9905   -50.134   -11.673    19.236              
         T  <A  34   THR    > matches  <A 405   THR    >                        ( 11.1 A from    S4  DBC A 591  )
         K  <A  60   LYS    > matches  <A 531   LYS    >                        (  8.4 A from    S4  DBC A 591  )
         E  <A 124   GLU    > matches  <A 440   GLU    >                        ( 13.3 A from   CL    CL A 590  )
 
KERBm  3*FOUND in 5u47  size =    3  ^    PENICILLIN BINDING PROTEIN 2X;                          #    2                            
  RMSD =     1.17 A
  TRANSFORM   -0.8885  0.2949 -0.3516 -0.1739  0.4925  0.8527 -0.4246 -0.8188  0.3863    30.523    -4.360    25.647              
         T  <A  34   THR    > matches  <A 713   THR    >                        ( 16.8 A from   CL    CL A 801  )
         K  <A  60   LYS    > matches  <A 716   LYS    >                        ( 21.4 A from   CL    CL A 801  )
         E  <A 124   GLU    > matches  <A 482   GLU    >                        (  5.7 A from   CL    CL A 801  )
 
KERBm  3*FOUND in 5d0o  size =    3  ^    OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA;            #    1                            
  RMSD =     1.17 A
  TRANSFORM   -0.4446  0.7022  0.5560  0.5274  0.7070 -0.4712  0.7240 -0.0838  0.6847    18.282   -29.888   -24.524              
         T  <A  34   THR    > matches  <A 452   THR    > 
         K  <A  60   LYS    > matches  <A 361   LYS    > 
         E  <A 124   GLU    > matches  <A 470   GLU    > 
 
KERBm  3*FOUND in 2ns6  size =    3  ^    MOBILIZATION PROTEIN A;                                 #    1                            
  RMSD =     1.17 A
  TRANSFORM    0.7770  0.2133  0.5922  0.4748  0.4192 -0.7739  0.4133 -0.8825 -0.2245    12.500     5.352    44.019              
         T  <A  34   THR    > matches  <A   7   THR    >                        ( 11.5 A from   MN    MN A1001  )
         K  <A  60   LYS    > matches  <A   9   LYS    >                        ( 11.9 A from   MN    MN A1001  )
         E  <A 124   GLU    > matches  <A  82   GLU    >                        ( 19.2 A from   MN    MN A1001  )
 
KERBm  3*FOUND in 1pvg  size =    3  ^    DNA TOPOISOMERASE II;                                   #    1                            
  RMSD =     1.17 A
  TRANSFORM   -0.5929  0.2147 -0.7761  0.7611 -0.1654 -0.6272  0.2630  0.9626  0.0654    73.474     4.950   -35.343              
         T  <A  34   THR    > matches  <A 198   THR    >                        ( 12.4 A from    N6  ANP A 901  )
         K  <A  60   LYS    > matches  <A 196   LYS    >                        ( 13.2 A from    N6  ANP A 901  )
         E  <A 124   GLU    > matches  <A 210   GLU    >                        ( 28.3 A from    N6  ANP A 901  )
 
KERBm  3*FOUND in 1mty  size =    3  ^    METHANE MONOOXYGENASE HYDROXYLASE;                      #    1                            
  RMSD =     1.18 A
  TRANSFORM   -0.7779 -0.6247 -0.0680 -0.5882  0.7619 -0.2712 -0.2212  0.1710  0.9601    64.149    34.664   -27.723              
         T  <A  34   THR    > matches  <G  94   THR    >                        ( 37.0 A from   FE    FE D   3  )
         K  <A  60   LYS    > matches  <G  97   LYS    >                        ( 39.5 A from   FE    FE D   3  )
         E  <A 124   GLU    > matches  <B 169   GLU    >                        ( 20.1 A from   FE    FE D   3  )
 
KERBm  3*FOUND in 3gmi  size =    3  ^    UPF0348 PROTEIN MJ0951;                                 #    2                            
  RMSD =     1.18 A
  TRANSFORM   -0.5376  0.5289  0.6567  0.1405  0.8241 -0.5487  0.8314  0.2027  0.5173    43.191   -12.227   -18.379              
         T  <A  34   THR    > matches  <A 336   THR    >                        ( 19.3 A from    O9  MLI A 401  )
         K  <A  60   LYS    > matches  <A 339   LYS    >                        ( 22.6 A from    O9  MLI A 401  )
         E  <A 124   GLU    > matches  <A 277   GLU    >                        ( 23.9 A from    O9  MLI A 401  )
 
KERBm  3*FOUND in 2c2u  size =    3  ^    DNA-BINDING STRESS RESPONSE PROTEIN;                    #    1                            
  RMSD =     1.18 A
  TRANSFORM   -0.6701  0.2444 -0.7009  0.6381 -0.2927 -0.7121  0.3792  0.9244 -0.0402    49.300    -1.609   -26.941              
         T  <A  34   THR    > matches  <A 189   THR    >                        ( 23.1 A from   FE    FE A1210  )
         K  <A  60   LYS    > matches  <A 192   LYS    >                        ( 18.2 A from   FE    FE A1210  )
         E  <A 124   GLU    > matches  <A 114   GLU    >                        ( 20.0 A from   ZN    ZN A1209  )
 
KERBm  3*FOUND in 5foc  size =    3  ^    LEUCYL-TRNA SYNTHETASE;                                 #    2                            
  RMSD =     1.18 A
  TRANSFORM   -0.5336 -0.5830  0.6127 -0.5749 -0.2814 -0.7684 -0.6203  0.7622  0.1850   -22.135    95.438     3.816              
         T  <A  34   THR    > matches  <A 543   THR    > 
         K  <A  60   LYS    > matches  <A 549   LYS    > 
         E  <A 124   GLU    > matches  <A 275   GLU    > 
 
KERBm  3*FOUND in 5ciy  size =    3  ^    MODIFICATION METHYLASE HHAI;                            #    1                            
  RMSD =     1.18 A
  TRANSFORM    0.2362 -0.7681 -0.5951  0.8105  0.4936 -0.3154 -0.5360  0.4078 -0.7392   210.421    84.441   293.639              
         T  <A  34   THR    > matches  <A 250   THR    >                        ( 12.9 A from    SD  SAH A 401  )
         K  <A  60   LYS    > matches  <A 162   LYS    >                        ( 18.6 A from    SD  SAH A 401  )
         E  <A 124   GLU    > matches  <A  40   GLU    >                        ( -2.8 A from    O3' SAH A 401s )
 
KERBm  3*FOUND in 3pei  size =    3  ^    CYTOSOL AMINOPEPTIDASE;                                 #    1                            
  RMSD =     1.18 A
  TRANSFORM   -0.7028  0.0889 -0.7058 -0.3789 -0.8865  0.2657  0.6020 -0.4541 -0.6567    72.783    34.994     4.357              
         T  <A  34   THR    > matches  <A 359   THR    >                        (  8.1 A from    C1  EDO A 503  )
         K  <A  60   LYS    > matches  <A 250   LYS    >                        (  6.2 A from   CL    CL A 496  )
         E  <A 124   GLU    > matches  <A  76   GLU    >                        ( -7.3 A from    O1  EDO A 504s )
 
KERBm  3*FOUND in 5i8j  size =    3  ^    DMD DISCRIMINATOR OF MRNA DEGRADATION;                  #    1                            
  RMSD =     1.18 A
  TRANSFORM   -0.7098 -0.0130  0.7043  0.4697  0.7364  0.4869  0.5250 -0.6764  0.5166    22.107   -17.161    13.237              
         T  <A  34   THR    > matches  <A   8   THR    > 
         K  <A  60   LYS    > matches  <A   6   LYS    > 
         E  <A 124   GLU    > matches  <A  17   GLU    > 
 
KERBm  3*FOUND in 3ieg  size =    3  ^    DNAJ HOMOLOG SUBFAMILY C MEMBER 3;                      #    1                            
  RMSD =     1.18 A
  TRANSFORM    0.1714  0.9721  0.1600 -0.2132  0.1952 -0.9573  0.9618 -0.1300 -0.2408     3.028    29.477    16.961              
         T  <A  34   THR    > matches  <A 297   THR    > 
         K  <A  60   LYS    > matches  <A 267   LYS    > 
         E  <A 124   GLU    > matches  <A 331   GLU    > 
 
KERBm  3*FOUND in 3oba  size =    3  ^    BETA-GALACTOSIDASE;                                     #    2                            
  RMSD =     1.18 A
  TRANSFORM    0.1460  0.9487 -0.2805  0.2620 -0.3105 -0.9137  0.9540 -0.0599  0.2939    26.436   -20.137    14.460              
         T  <A  34   THR    > matches  <A 596   THR    >                        (  6.3 A from   MN   MN3 A2001  )
         K  <A  60   LYS    > matches  <A 980   LYS    >                        ( 11.7 A from   MN   MN3 A2001  )
         E  <A 124   GLU    > matches  <A 613   GLU    >                        ( 13.7 A from   MN   MN3 A2001  )
 
KERBm  3*FOUND in 3l4j  size =    3  ^    DNA TOPOISOMERASE 2;                                    #    2                            
  RMSD =     1.18 A
  TRANSFORM   -0.0445 -0.9976 -0.0531 -0.3549 -0.0339  0.9343  0.9339 -0.0604  0.3525    35.578    34.324    -9.974              
         T  <A  34   THR    > matches  <A1157   THR    >                        ( 38.1 A from    O  APTR A 782  )
         K  <A  60   LYS    > matches  <A1160   LYS    >                        ( 38.9 A from    O  APTR A 782  )
         E  <A 124   GLU    > matches  <A1019   GLU    >                        ( 40.2 A from    C  APTR A 782  )
 
KERBm  3*FOUND in 3kt7  size =    3  ^    PKHD-TYPE HYDROXYLASE TPA1;                             #    2                            
  RMSD =     1.18 A
  TRANSFORM   -0.2358 -0.4820 -0.8439  0.7082 -0.6799  0.1905  0.6655  0.5527 -0.5016   -24.172    -0.516    39.088              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 11.6 A from    O1  AKG A 702  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        ( 12.4 A from    O1  AKG A 702  )
         E  <A 124   GLU    > matches  <A 535   GLU    >                        ( 24.1 A from    O4  SO4 A 703  )
 
KERBm  3*FOUND in 4n0h  size =    3  ^    GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A,          #    1                            
  RMSD =     1.18 A
  TRANSFORM    0.0857 -0.5769  0.8123 -0.9620  0.1643  0.2182  0.2593  0.8001  0.5409    29.757    19.622    29.215              
         T  <A  34   THR    > matches  <A  79   THR    >                        ( 37.7 A from    O1  NO3 A 501  )
         K  <A  60   LYS    > matches  <A  82   LYS    >                        ( 38.4 A from    O1  NO3 A 501  )
         E  <A 124   GLU    > matches  <A 292   GLU    >                        ( 42.5 A from    O1  NO3 A 501  )
 
KERBm  3*FOUND in 3uk7  size =    3  ^    CLASS I GLUTAMINE AMIDOTRANSFERASE-LIKE DOMAIN-CONT     #    1                            
  RMSD =     1.19 A
  TRANSFORM   -0.1748 -0.9845  0.0156  0.8469 -0.1584 -0.5077 -0.5022  0.0756 -0.8614    70.948     5.312    94.729              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 14.1 A from    O   CSX A 120  )
         K  <A  60   LYS    > matches  <A 107   LYS    >                        ( 18.6 A from    O   CSX A 120  )
         E  <A 124   GLU    > matches  <A 156   GLU    >                        ( 11.4 A from    O   CSX A 120  )
 
KERBm  3*FOUND in 4g68  size =    3  ^    ABC TRANSPORTER;                                        #    1                            
  RMSD =     1.19 A
  TRANSFORM   -0.3030  0.9389  0.1633 -0.2626 -0.2470  0.9328 -0.9161 -0.2397 -0.3214    16.825    -7.464    45.715              
         T  <A  34   THR    > matches  <A 170   THR    >                        ( 30.3 A from    O4B XYP A 802  )
         K  <A  60   LYS    > matches  <A 174   LYS    >                        ( 33.4 A from    O5B XYP A 801  )
         E  <A 124   GLU    > matches  <A 292   GLU    >                        ( 29.9 A from    O4B XYP A 802  )
 
KERBm  3*FOUND in 5iz5  size =    3  ^    CYTOSOLIC PHOSPHOLIPASE A2 DELTA;                       #    1                            
  RMSD =     1.19 A
  TRANSFORM   -0.1868  0.9783  0.0894 -0.8205 -0.2054  0.5334 -0.5402 -0.0263 -0.8411    -0.032   -46.425   -64.386              
         T  <A  34   THR    > matches  <A 802   THR    >                        ( 19.2 A from    O1  SO4 A 902  )
         K  <A  60   LYS    > matches  <A 805   LYS    >                        ( 23.3 A from    O1  SO4 A 902  )
         E  <A 124   GLU    > matches  <A 701   GLU    >                        ( 23.9 A from    O1  SO4 A 902  )
 
KERBm  3*FOUND in 1fnn  size =    3  ^    CELL DIVISION CONTROL PROTEIN 6;                        #    2                            
  RMSD =     1.19 A
  TRANSFORM    0.1203  0.9851 -0.1228 -0.8402  0.0352 -0.5411  0.5287 -0.1683 -0.8319    19.734    24.662    24.098              
         T  <A  34   THR    > matches  <A  54   THR    >                        ( -4.5 A from    O2B ADP A 398s )
         K  <A  60   LYS    > matches  <A  56   LYS    >                        ( -3.0 A from    O2B ADP A 398s )
         E  <A 124   GLU    > matches  <A 348   GLU    >                        ( 20.3 A from    O4' ADP A 398  )
 
KERBm  3*FOUND in 4n7b  size =    3  ^    LYTB;                                                   #    1                            
  RMSD =     1.19 A
  TRANSFORM    0.3767  0.8293  0.4128 -0.9001  0.2222  0.3748 -0.2191  0.5128 -0.8301   -13.865    38.653    14.817              
         T  <A  34   THR    > matches  <A 204   THR    >                        (  7.1 A from    O3  SO4 A 403  )
         K  <A  60   LYS    > matches  <A 208   LYS    >                        (  8.9 A from    O1  SO4 A 403  )
         E  <A 124   GLU    > matches  <A 128   GLU    >                        (  5.7 A from    O1  SO4 A 402  )
 
KERBm  3*FOUND in 4fas  size =    3  ^    HYDROXYLAMINE OXIDOREDUCTASE;                           #    1                            
  RMSD =     1.19 A
  TRANSFORM    0.6512  0.6349 -0.4158 -0.5466  0.7725  0.3233 -0.5264 -0.0167 -0.8500   -31.151   -31.371    71.065              
         T  <A  34   THR    > matches  <A 234   THR    >                        (  5.1 A from    CBC HEC A 605  )
         K  <A  60   LYS    > matches  <A 238   LYS    >                        (  4.5 A from    O2D HEC A 602s )
         E  <A 124   GLU    > matches  <A 447   GLU    >                        (  3.6 A from    C2  PEG A 614  )
 
KERBm  3*FOUND in 5zqy  size =    3  ^    POLY(ADP-RIBOSE) GLYCOHYDROLASE ARH3;                   #    1                            
  RMSD =     1.19 A
  TRANSFORM    0.9677 -0.1175  0.2232  0.2323  0.0695 -0.9702 -0.0984 -0.9906 -0.0946    14.961    -8.584    30.138              
         T  <A  34   THR    > matches  <A 122   THR    >                        (  8.5 A from    O2A AR6 A 403  )
         K  <A  60   LYS    > matches  <A 126   LYS    >                        ( 12.2 A from    O1A AR6 A 403  )
         E  <A 124   GLU    > matches  <A  41   GLU    >                        (  3.9 A from   MG    MG A 401  )
 
KERBm  3*FOUND in 5x2b  size =    3  ^    SULFOTRANSFERASE;                                       #    1                            
  RMSD =     1.19 A
  TRANSFORM    0.0921  0.8043 -0.5871 -0.3127  0.5831  0.7498 -0.9454 -0.1145 -0.3052    72.008   -47.596    29.546              
         T  <A  34   THR    > matches  <A 103   THR    >                        ( 11.7 A from   CA    CA A 302  )
         K  <A  60   LYS    > matches  <A 107   LYS    >                        ( 16.5 A from   CA    CA A 302  )
         E  <A 124   GLU    > matches  <A  25   GLU    >                        ( 17.1 A from   CA    CA A 302  )
 
KERBm  3*FOUND in 5u3f  size =    3  ^    BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE;             #    3                            
  RMSD =     1.19 A
  TRANSFORM    0.7170  0.4716  0.5134 -0.3744 -0.3607  0.8542 -0.5880  0.8047  0.0820    31.198    18.466    33.894              
         T  <A  34   THR    > matches  <A 319   THR    >                        ( 11.4 A from    C5A 7TS A 400  )
         K  <A  60   LYS    > matches  <A 182+  LYS    >                        ( 16.9 A from    C5A 7TS A 400  )
         E  <A 124   GLU    > matches  <A  78   GLU    >                        (  6.0 A from    O3P 7TS A 400  )
 
KERBm  3*FOUND in 1w2y  size =    3  ^    DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDE                 #    1                            
  RMSD =     1.19 A
  TRANSFORM    0.8396  0.4030 -0.3642  0.4262 -0.0731  0.9017 -0.3367  0.9123  0.2331   -42.453   -27.967   -10.191              
         T  <A  34   THR    > matches  <A 156   THR    >                        ( 20.6 A from   MG    MG A1232  )
         K  <A  60   LYS    > matches  <A 160   LYS    >                        ( 21.0 A from   MG    MG A1232  )
         E  <A 124   GLU    > matches  <A  89   GLU    >                        ( 15.7 A from    O4  DUN A1230  )
 
KERBm  3*FOUND in 3bja  size =    3  ^    TRANSCRIPTIONAL REGULATOR, MARR FAMILY, PUTATIVE;       #    1                            
  RMSD =     1.19 A
  TRANSFORM    0.4354 -0.3165 -0.8427 -0.3993 -0.9069  0.1343  0.8068 -0.2780  0.5213     4.667    11.163    -5.989              
         T  <A  34   THR    > matches  <A  99   THR    > 
         K  <A  60   LYS    > matches  <A  95   LYS    > 
         E  <A 124   GLU    > matches  <A 113   GLU    > 
 
KERBm  3*FOUND in 1o50  size =    3  ^    CBS DOMAIN-CONTAINING PREDICTED PROTEIN TM0935;         #    1                            
  RMSD =     1.19 A
  TRANSFORM    0.5298 -0.4700 -0.7060 -0.0502 -0.8483  0.5271  0.8467  0.2438  0.4730    80.631   -51.969   -47.448              
         T  <A  34   THR    > matches  <A  15   THR    > 
         K  <A  60   LYS    > matches  <A  13   LYS    > 
         E  <A 124   GLU    > matches  <A  88   GLU    > 
 
KERBm  3*FOUND in 5ux5  size =    3  ^    BIFUNCTIONAL PROTEIN PROLINE UTILIZATION A (PUTA);      #    1                            
  RMSD =     1.19 A
  TRANSFORM   -0.7456  0.6200 -0.2442  0.2116  0.5678  0.7955 -0.6319 -0.5415  0.5545     2.520   -77.472   142.127              
         T  <A  34   THR    > matches  <A 189   THR    >                        ( 11.1 A from    O4  FAD A2001  )
         K  <A  60   LYS    > matches  <A 187   LYS    >                        (  7.2 A from    N3  FAD A2001  )
         E  <A 124   GLU    > matches  <A 550   GLU    >                        (  7.3 A from    O1  SO4 A2003  )
 
KERBm  3*FOUND in 5u4h  size =    3  ^    UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE;      #    1                            
  RMSD =     1.19 A
  TRANSFORM    0.9125  0.3334 -0.2372 -0.2420 -0.0279 -0.9699  0.3300 -0.9424 -0.0552    21.405    38.134    36.032              
         T  <A  34   THR    > matches  <A  70   THR    >                        ( 17.1 A from   NA    NA A 506  )
         K  <A  60   LYS    > matches  <A  72   LYS    >                        ( 15.3 A from   NA    NA A 506  )
         E  <A 124   GLU    > matches  <A 405   GLU    >                        ( 21.4 A from    O2  FMT A 507  )
 
KERBm  3*FOUND in 3rw6  size =    3  ^    NUCLEAR RNA EXPORT FACTOR 1;                            #    1                            
  RMSD =     1.19 A
  TRANSFORM   -0.9457 -0.1366  0.2950 -0.2827 -0.1026 -0.9537 -0.1605  0.9853 -0.0584    14.338   -20.886    44.012              
         T  <A  34   THR    > matches  <A 123   THR    > 
         K  <A  60   LYS    > matches  <A 121   LYS    > 
         E  <A 124   GLU    > matches  <A 183   GLU    > 
 
KERBm  3*FOUND in 2p22  size =    3  ^    SUPPRESSOR PROTEIN STP22 OF TEMPERATURE-SENSITIVE A     #    2                            
  RMSD =     1.20 A
  TRANSFORM   -0.2635  0.6876  0.6766  0.0084  0.7030 -0.7112  0.9646  0.1817  0.1910    81.633    11.202    43.437              
         T  <A  34   THR    > matches  <B 113   THR    >                        ( 23.8 A from    O3  SO4 C 215  )
         K  <A  60   LYS    > matches  <B 109+  LYS    >                        ( 28.4 A from    O3  SO4 C 215  )
         E  <A 124   GLU    > matches  <D   7   GLU    >                        ( 13.7 A from    O3  SO4 C 215  )
 
KERBm  3*FOUND in 2et6  size =    3  ^    (3R)-HYDROXYACYL-COA DEHYDROGENASE;                     #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.5982  0.1444 -0.7882  0.7981  0.0187 -0.6023  0.0722  0.9893  0.1264    50.333   -12.392   -29.247              
         T  <A  34   THR    > matches  <A 536   THR    > 
         K  <A  60   LYS    > matches  <A 491   LYS    > 
         E  <A 124   GLU    > matches  <A 237   GLU    > 
 
KERBm  3*FOUND in 3ogh  size =    3  ^    PROTEIN YCIE;                                           #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.6518 -0.5453 -0.5270 -0.7466  0.5835  0.3195 -0.1333 -0.6018  0.7875    36.468     7.336     3.274              
         T  <A  34   THR    > matches  <A 151   THR    >                        ( 17.1 A from   FE    FE A 401  )
         K  <A  60   LYS    > matches  <A 154   LYS    >                        ( 21.5 A from   FE    FE A 401  )
         E  <A 124   GLU    > matches  <A 107   GLU    >                        (  2.4 A from   MG    MG A 501s )
 
KERBm  3*FOUND in 3olj  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2;        #    2                            
  RMSD =     1.20 A
  TRANSFORM   -0.7718 -0.0086 -0.6358  0.1719 -0.9655 -0.1956  0.6122  0.2602 -0.7466    27.961     4.285    21.988              
         T  <A  34   THR    > matches  <A 182   THR    >                        ( 42.0 A from   NA    NA A   1  )
         K  <A  60   LYS    > matches  <A 185   LYS    >                        ( 45.7 A from   NA    NA A   1  )
         E  <A 124   GLU    > matches  <A 260   GLU    >                        ( 36.5 A from   NA    NA A   1  )
 
KERBm  3*FOUND in 5vol  size =    3  ^    PUTATIVE ESTERASE;                                      #    1                            
  RMSD =     1.20 A
  TRANSFORM    0.9272  0.2081 -0.3115  0.1048  0.6543  0.7489 -0.3596  0.7271 -0.5848     4.990   -24.340    28.973              
         T  <A  34   THR    > matches  <A  29   THR    >                        ( 22.6 A from    H12 IPA A 304  )
         K  <A  60   LYS    > matches  <A  38   LYS    >                        ( 25.8 A from    H12 IPA A 304  )
         E  <A 124   GLU    > matches  <A  50   GLU    >                        ( 27.7 A from    H13 IPA A 304  )
 
KERBm  3*FOUND in 5m4a  size =    3  ^    NEUTRAL TREHALASE;                                      #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.0795 -0.6479 -0.7575  0.7740  0.4388 -0.4565 -0.6282  0.6226 -0.4666     2.116    -0.173    58.757              
         T  <A  34   THR    > matches  <A 409   THR    >                        ( 25.3 A from    O3P TRE A 801  )
         K  <A  60   LYS    > matches  <A 542   LYS    >                        ( 30.2 A from    O3P TRE A 801  )
         E  <A 124   GLU    > matches  <A 464   GLU    >                        ( 19.6 A from    O4  TRE A 801  )
 
KERBm  3*FOUND in 6b8f  size =    3  ^    FERRITIN HEAVY CHAIN;                                   #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.7149  0.6484 -0.2618 -0.6948 -0.6166  0.3703 -0.0787 -0.4467 -0.8912     1.579    21.675    55.251              
         T  <A  34   THR    > matches  <A 153   THR    >                        ( 18.4 A from   FE  A FE A 202  )
         K  <A  60   LYS    > matches  <A 157   LYS    >                        ( 18.6 A from   CA    CA A 208  )
         E  <A 124   GLU    > matches  <A  61   GLU    >                        (  4.5 A from   FE  A FE A 202  )
 
KERBm  3*FOUND in 5c2i  size =    3  ^    ALR1585 PROTEIN;                                        #    2                            
  RMSD =     1.20 A
  TRANSFORM    0.9463  0.0592 -0.3179  0.0310  0.9619  0.2716 -0.3219  0.2669 -0.9084    49.340    34.083   -19.402              
         T  <A  34   THR    > matches  <A 416   THR    >                        ( 15.4 A from    CBD HEM A 501  )
         K  <A  60   LYS    > matches  <A 430   LYS    >                        ( 22.2 A from    CBD HEM A 501  )
         E  <A 124   GLU    > matches  <A 357   GLU    >                        ( 10.1 A from    C2  EDO A 503  )
 
KERBm  3*FOUND in 2woy  size =    3  ^    AGGLUTININ RECEPTOR;                                    #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.3492 -0.0762  0.9339 -0.4766  0.8726 -0.1070  0.8068  0.4825  0.3411     9.767   -35.537    20.722              
         T  <A  34   THR    > matches  <A1256   THR    >                        ( 13.8 A from   CA    CA A2417  )
         K  <A  60   LYS    > matches  <A1254   LYS    >                        ( 17.1 A from   CA    CA A2417  )
         E  <A 124   GLU    > matches  <A1392   GLU    >                        ( 12.8 A from   CA    CA A2415  )
 
KERBm  3*FOUND in 3vti  size =    3  ^    HYDROGENASE MATURATION FACTOR;                          #    1                            
  RMSD =     1.20 A
  TRANSFORM    0.4922 -0.6219 -0.6091 -0.8687 -0.3059 -0.3896 -0.0560 -0.7209  0.6908    46.296    19.435   -41.456              
         T  <A  34   THR    > matches  <C 189   THR    >                        ( 18.5 A from   MG    MG C 401  )
         K  <A  60   LYS    > matches  <C 267   LYS    >                        ( 20.5 A from   MG    MG C 401  )
         E  <A 124   GLU    > matches  <C 248   GLU    >                        (  7.6 A from   MG    MG C 401  )
 
KERBm  3*FOUND in 5y3e  size =    3  ^    REPLICASE POLYPROTEIN 1A;                               #    2                            
  RMSD =     1.20 A
  TRANSFORM    0.7947  0.1965  0.5743  0.4906  0.3492 -0.7984  0.3574 -0.9162 -0.1811    -9.913   107.936    43.457              
         T  <A  34   THR    > matches  <A 198   THR    >                        ( 13.1 A from   ZN    ZN A 401  )
         K  <A  60   LYS    > matches  <A 196   LYS    >                        (  8.2 A from   ZN    ZN A 401  )
         E  <A 124   GLU    > matches  <A 180   GLU    >                        ( 17.2 A from   NA    NA A 406  )
 
KERBm  3*FOUND in 5ab0  size =    3  ^    ENDOPLASMATIC RETICULUM AMINOPEPTIDASE 2;               #    2                            
  RMSD =     1.20 A
  TRANSFORM    0.5603  0.7070  0.4316 -0.7851  0.6193  0.0048  0.2639  0.3415 -0.9020    26.569    34.659    13.038              
         T  <A  34   THR    > matches  <A 676   THR    >                        ( 24.6 A from    C8  NAG A1070  )
         K  <A  60   LYS    > matches  <A 679   LYS    >                        ( 25.5 A from    C1  NAG A1079  )
         E  <A 124   GLU    > matches  <A 576   GLU    >                        (  6.3 A from    C8  NAG A1070  )
 
KERBm  3*FOUND in 6eon  size =    3  ^    BETA-GALACTOSIDASE;                                     #    2                            
  RMSD =     1.20 A
  TRANSFORM    0.8094 -0.5007 -0.3068  0.4105  0.8560 -0.3142 -0.4199 -0.1284 -0.8984     2.845    54.226    21.731              
         T  <A  34   THR    > matches  <A 762   THR    >                        ( 16.6 A from   CA    CA A 802  )
         K  <A  60   LYS    > matches  <A 671   LYS    >                        ( 23.0 A from   CA    CA A 802  )
         E  <A 124   GLU    > matches  <A 273   GLU    >                        (  9.9 A from   CA    CA A 802  )
 
KERBm  3*FOUND in 5h5m  size =    3  ^    ALPHA-CATENIN-LIKE PROTEIN HMP-1;                       #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.8157 -0.5169  0.2597 -0.1219 -0.2853 -0.9506 -0.5655  0.8071 -0.1697   114.898    59.942   -10.046              
         T  <A  34   THR    > matches  <A 343   THR    > 
         K  <A  60   LYS    > matches  <A 347   LYS    > 
         E  <A 124   GLU    > matches  <A 330   GLU    > 
 
KERBm  3*FOUND in 2p5i  size =    3  ^    BH3822 PROTEIN;                                         #    1                            
  RMSD =     1.20 A
  TRANSFORM    0.5350  0.2918 -0.7929 -0.6985 -0.3752 -0.6094  0.4753 -0.8798 -0.0031    11.805    50.513    11.689              
         T  <A  34   THR    > matches  <A 196   THR    > 
         K  <A  60   LYS    > matches  <A 200   LYS    > 
         E  <A 124   GLU    > matches  <A 224   GLU    > 
 
KERBm  3*FOUND in 4pw2  size =    3  ^    D-GLUCURONYL C5 EPIMERASE B;                            #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.5463  0.8370 -0.0311 -0.8086 -0.5174  0.2800 -0.2183 -0.1781 -0.9595    22.049   -10.533   162.868              
         T  <A  34   THR    > matches  <A 170   THR    >                        ( 11.9 A from    O3  CIT A 601  )
         K  <A  60   LYS    > matches  <A 158   LYS    >                        ( 16.9 A from    O3  CIT A 601  )
         E  <A 124   GLU    > matches  <A 406   GLU    >                        ( 17.4 A from    O2  CIT A 601  )
 
KERBm  3*FOUND in 6bni  size =    3  ^    LYSINE--TRNA LIGASE;                                    #    1                            
  RMSD =     1.20 A
  TRANSFORM    0.7637 -0.5551  0.3296 -0.0998  0.4029  0.9098  0.6379  0.7276 -0.2523    60.094    25.694   -10.749              
         T  <A  34   THR    > matches  <A 470   THR    >                        (  9.5 A from    CE  LYS A 601  )
         K  <A  60   LYS    > matches  <A 444   LYS    >                        ( 10.1 A from    O2  EDO A 611  )
         E  <A 124   GLU    > matches  <A 328   GLU    >                        ( 10.6 A from   NA    NA A 612  )
 
KERBm  3*FOUND in 3ryp  size =    3  ^    CATABOLITE GENE ACTIVATOR;                              #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.7231  0.0417 -0.6895 -0.2650 -0.9386  0.2211  0.6379 -0.3426 -0.6897    72.181    28.762    44.851              
         T  <A  34   THR    > matches  <A 127   THR    >                        ( -3.2 A from    N6  CMP A 301s )
         K  <A  60   LYS    > matches  <A 130   LYS    >                        (  2.4 A from    O3  GOL A 210s )
         E  <A 124   GLU    > matches  <A  77   GLU    >                        ( 12.5 A from    O1P CMP A 301  )
 
KERBm  3*FOUND in 3d1l  size =    3  ^    PUTATIVE NADP OXIDOREDUCTASE BF3122;                    #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.2396 -0.4254  0.8727 -0.2552 -0.8397 -0.4793 -0.9367  0.3375 -0.0927     5.886    22.329    18.480              
         T  <A  34   THR    > matches  <A 210   THR    >                        ( 15.9 A from    S3  MPR A 301  )
         K  <A  60   LYS    > matches  <A 213   LYS    >                        ( 21.4 A from    S3  MPR A 301  )
         E  <A 124   GLU    > matches  <A 191   GLU    >                        ( 19.0 A from    O   MPR A 301  )
 
KERBm  3*FOUND in 2ogg  size =    3  ^    TREHALOSE OPERON TRANSCRIPTIONAL REPRESSOR;             #    1                            
  RMSD =     1.20 A
  TRANSFORM   -0.0024 -0.9179 -0.3969 -0.9994 -0.0118  0.0334  0.0353 -0.3967  0.9173    44.351     2.911     5.193              
         T  <A  34   THR    > matches  <A  98   THR    >                        ( 12.8 A from    O4  SO4 A 302  )
         K  <A  60   LYS    > matches  <A  96   LYS    >                        ( 16.0 A from    O4  SO4 A 302  )
         E  <A 124   GLU    > matches  <A 105   GLU    >                        ( -4.2 A from    O2  GOL A 304s )
 
KERBm  3*FOUND in 4zoh  size =    3  ^    PUTATIVE OXIDOREDUCTASE MOLYBDOPTERIN-BINDING SUBUN     #    1                            
  RMSD =     1.20 A
  TRANSFORM    0.7717  0.5080 -0.3826 -0.4654  0.0412 -0.8841  0.4333 -0.8604 -0.2682   -87.217    63.454    49.465              
         T  <A  34   THR    > matches  <A 180   THR    >                        ( 22.3 A from    C16 1PE A 803  )
         K  <A  60   LYS    > matches  <A 178   LYS    >                        ( 24.1 A from    C16 1PE A 803  )
         E  <A 124   GLU    > matches  <A 166   GLU    >                        ( 10.4 A from    O4' MCN A 801  )
 
KERBm  3*FOUND in 2nyv  size =    3  ^    PHOSPHOGLYCOLATE PHOSPHATASE;                           #    1                            
  RMSD =     1.21 A
  TRANSFORM   -0.2431 -0.5323  0.8109 -0.1783  0.8462  0.5021  0.9535  0.0225  0.3006    34.941   -15.975    24.534              
         T  <A  34   THR    > matches  <A 179   THR    > 
         K  <A  60   LYS    > matches  <A 173   LYS    > 
         E  <A 124   GLU    > matches  <A  87   GLU    > 
 
KERBm  3*FOUND in 3o5c  size =    3  ^    CYTOCHROME C551 PEROXIDASE;                             #    1                            
  RMSD =     1.21 A
  TRANSFORM   -0.4562 -0.8560  0.2432 -0.8442  0.3299 -0.4225 -0.2814  0.3980  0.8731     5.222    -2.629    29.058              
         T  <A  34   THR    > matches  <A 240   THR    >                        ( 13.7 A from    O1D HEM A 401  )
         K  <A  60   LYS    > matches  <A 242   LYS    >                        ( 17.0 A from    CMD HEM A 501  )
         E  <A 124   GLU    > matches  <A 123   GLU    >                        ( -4.0 A from    C4C HEM A 401s )
 
KERBm  3*FOUND in 3lpm  size =    3  ^    PUTATIVE METHYLTRANSFERASE;                             #    1                            
  RMSD =     1.21 A
  TRANSFORM    0.1492  0.9458 -0.2885 -0.1317  0.3082  0.9422 -0.9800  0.1026 -0.1705     3.072  -102.769    76.520              
         T  <A  34   THR    > matches  <A 154   THR    > 
         K  <A  60   LYS    > matches  <A 152+  LYS    > 
         E  <A 124   GLU    > matches  <A  82   GLU    > 
 
KERBm  3*FOUND in 2gmh  size =    3  ^    ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE               #    1                            
  RMSD =     1.21 A
  TRANSFORM    0.3955  0.7814 -0.4827  0.2037 -0.5871 -0.7835  0.8956 -0.2115  0.3914    14.929    61.794   -46.818              
         T  <A  34   THR    > matches  <A 319   THR    >                        ( 16.1 A from    C3M UQ5 A 612  )
         K  <A  60   LYS    > matches  <A 252   LYS    >                        ( 20.2 A from    O1  EDO A 627  )
         E  <A 124   GLU    > matches  <A 306   GLU    >                        ( 11.9 A from    C2  EDO A 625  )
 
KERBm  3*FOUND in 5ksz  size =    3  ^    MITOCHONDRIAL RHO GTPASE 1;                             #    3                            
  RMSD =     1.21 A
  TRANSFORM   -0.9215 -0.3812  0.0742  0.3873 -0.9162  0.1027 -0.0289 -0.1234 -0.9919   -18.269   -18.309   -27.227              
         T  <A  34   THR    > matches  <A 267   THR    >                        ( 14.6 A from   CL    CL A 704  )
         K  <A  60   LYS    > matches  <A 264+  LYS    >                        ( 19.4 A from   CL    CL A 704  )
         E  <A 124   GLU    > matches  <A 208   GLU    >                        ( -2.4 A from   MG    MG A 701s )
 
KERBm  3*FOUND in 3ecq  size =    3  ^    ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE;                   #    1                            
  RMSD =     1.21 A
  TRANSFORM    0.9681  0.1442 -0.2047 -0.1506  0.9885 -0.0157 -0.2000 -0.0460 -0.9787   -26.060   -13.550    51.420              
         T  <A  34   THR    > matches  <A 679   THR    >                        ( 26.8 A from    O3  GOL A2003  )
         K  <A  60   LYS    > matches  <A 683   LYS    >                        ( 28.8 A from    O3  GOL A2003  )
         E  <A 124   GLU    > matches  <A 655   GLU    >                        (  7.3 A from   NA    NA A2002  )
 
KERBm  3*FOUND in 3w6w  size =    3  ^    TYROSINASE;                                             #    1                            
  RMSD =     1.21 A
  TRANSFORM   -0.5138  0.8540 -0.0815 -0.7675 -0.5000 -0.4012  0.3834  0.1436 -0.9123    20.905   -42.033    18.298              
         T  <A  34   THR    > matches  <A 233   THR    >                        ( 14.5 A from   CU    CU A 702  )
         K  <A  60   LYS    > matches  <A 235   LYS    >                        ( 13.9 A from   CU    CU A 702  )
         E  <A 124   GLU    > matches  <A 206   GLU    >                        ( 25.6 A from   CU    CU A 701  )
 
KERBm  3*FOUND in 1nba  size =    3  ^    N-CARBAMOYLSARCOSINE AMIDOHYDROLASE;                    #    2                            
  RMSD =     1.21 A
  TRANSFORM    0.1736  0.9200  0.3513  0.2971 -0.3890  0.8720 -0.9389  0.0470  0.3408   -80.452   -46.188    22.349              
         T  <A  34   THR    > matches  <A  92   THR    >                        ( 10.1 A from    O3  SO4 A 400  )
         K  <A  60   LYS    > matches  <A 144   LYS    >                        (  6.1 A from    O4  SO4 A 400  )
         E  <A 124   GLU    > matches  <A  80   GLU    >                        ( 25.2 A from    O2  SO4 A 400  )
 
KERBm  3*FOUND in 4lun  size =    3  ^    NONSENSE-MEDIATED MRNA DECAY PROTEIN 2;                 #    2                            
  RMSD =     1.21 A
  TRANSFORM    0.3779  0.8363  0.3972 -0.8581  0.1554  0.4893 -0.3475  0.5258 -0.7764    22.936   -12.755    21.003              
         T  <A  34   THR    > matches  <U  75   THR    >                        ( 28.4 A from   CL    CL U 401  )
         K  <A  60   LYS    > matches  <U  45   LYS    >                        ( 33.2 A from   CL    CL U 401  )
         E  <A 124   GLU    > matches  <U 163   GLU    >                        ( 18.7 A from   CL    CL U 401  )
 
KERBm  3*FOUND in 1mxs  size =    3  ^    KDPG ALDOLASE;                                          #    1                            
  RMSD =     1.21 A
  TRANSFORM   -0.4126 -0.9076  0.0778 -0.8613  0.4165  0.2911  0.2966 -0.0531  0.9535   131.139    -0.567   -26.600              
         T  <A  34   THR    > matches  <A 173   THR    >                        (  5.6 A from    O4  SO4 A 299  )
         K  <A  60   LYS    > matches  <A 145   LYS    >                        ( -2.7 A from    O2  SO4 A 300s )
         E  <A 124   GLU    > matches  <A 218   GLU    >                        ( 16.4 A from    O3  SO4 A 299  )
 
KERBm  3*FOUND in 5e62  size =    3  ^    HEMAGGLUTININ-ESTERASE;                                 #    1                            
  RMSD =     1.21 A
  TRANSFORM   -0.9024  0.4270  0.0570  0.1505  0.4365 -0.8870  0.4037  0.7919  0.4582     2.998   -51.394    25.893              
         T  <A  34   THR    > matches  <A 332   THR    >                        (  8.9 A from    C8  NAG A 702  )
         K  <A  60   LYS    > matches  <A 135   LYS    >                        (  8.4 A from    C8  NAG A 702  )
         E  <A 124   GLU    > matches  <A 109   GLU    >                        ( 22.5 A from    O6  MAN A 705  )
 
KERBm  3*FOUND in 2im5  size =    3  ^    NICOTINATE PHOSPHORIBOSYLTRANSFERASE;                   #    1                            
  RMSD =     1.21 A
  TRANSFORM   -0.9965 -0.0032 -0.0836 -0.0800 -0.2576  0.9629  0.0246 -0.9662 -0.2564    27.059    37.741   -17.282              
         T  <A  34   THR    > matches  <A 270   THR    > 
         K  <A  60   LYS    > matches  <A 300   LYS    > 
         E  <A 124   GLU    > matches  <A  73   GLU    > 
 
KERBm  3*FOUND in 4i3g  size =    3  ^    BETA-GLUCOSIDASE;                                       #    3                            
  RMSD =     1.21 A
  TRANSFORM    0.7460  0.3812 -0.5461  0.2977  0.5426  0.7855 -0.5958  0.7485 -0.2913    59.871    39.695     5.687              
         T  <A  34   THR    > matches  <A 590   THR    >                        ( -4.5 A from    O4  SO4 A 904s )
         K  <A  60   LYS    > matches  <A 593   LYS    >                        ( -3.8 A from    O4  SO4 A 904s )
         E  <A 124   GLU    > matches  <A 542   GLU    >                        ( 24.9 A from    O4  SO4 A 904  )
 
KERBm  3*FOUND in 2oyh  size =    3  ^    FIBRINOGEN ALPHA CHAIN;                                 #    1                            
  RMSD =     1.21 A
  TRANSFORM   -0.9518 -0.2421  0.1885 -0.3026  0.8427 -0.4453  0.0510  0.4809  0.8753    43.722     4.726   -14.637              
         T  <A  34   THR    > matches  <B 280   THR    >                        ( 43.1 A from   CA    CA B   2  )
         K  <A  60   LYS    > matches  <B 283   LYS    >                        ( 49.7 A from   CA    CA B   2  )
         E  <A 124   GLU    > matches  <B 313   GLU    >                        ( 31.0 A from    C6  FUC B   5  )
 
KERBm  3*FOUND in 3ozq  size =    3  ^    SERPIN48;                                               #    1                            
  RMSD =     1.21 A
  TRANSFORM    0.3931  0.6181 -0.6808  0.0167 -0.7450 -0.6668  0.9193 -0.2508  0.3032   324.563  -349.567  -128.619              
         T  <A  34   THR    > matches  <A 387   THR    > 
         K  <A  60   LYS    > matches  <A 204   LYS    > 
         E  <A 124   GLU    > matches  <A 340   GLU    > 
 
KERBm  3*FOUND in 4eco  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    2                            
  RMSD =     1.21 A
  TRANSFORM    0.1658  0.6900 -0.7046  0.9020 -0.3949 -0.1744  0.3986  0.6067  0.6878     2.052  -112.828   -98.297              
         T  <A  34   THR    > matches  <A 587   THR    >                        ( 34.5 A from   NA    NA A1001  )
         K  <A  60   LYS    > matches  <A 560   LYS    >                        ( 34.3 A from   NA    NA A1001  )
         E  <A 124   GLU    > matches  <A 681   GLU    >                        ( 40.6 A from   NA    NA A1001  )
 
KERBm  3*FOUND in 1twf  size =    3  ^    DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT;         #    2                            
  RMSD =     1.21 A
  TRANSFORM    0.8242  0.4392 -0.3576  0.3720 -0.8959 -0.2429  0.4270 -0.0672  0.9017    -0.960    37.524   -20.331              
         T  <A  34   THR    > matches  <A  69   THR    >                        (  9.8 A from   ZN    ZN A3008  )
         K  <A  60   LYS    > matches  <B1174   LYS    >                        ( 11.1 A from   ZN    ZN A3008  )
         E  <A 124   GLU    > matches  <A  43   GLU    >                        ( 18.8 A from   ZN    ZN A3008  )
 
KERBm  3*FOUND in 2vhh  size =    3  ^    CG3027-PA;                                              #    1                            
  RMSD =     1.21 A
  TRANSFORM    0.1078  0.4043 -0.9082  0.1338  0.8993  0.4163 -0.9851  0.1664 -0.0429    57.027   -35.145   -67.781              
         T  <A  34   THR    > matches  <A 181   THR    > 
         K  <A  60   LYS    > matches  <A 194   LYS    > 
         E  <A 124   GLU    > matches  <A 293   GLU    > 
 
KERBm  3*FOUND in 5vg3  size =    3  ^    OXALATE DECARBOXYLASE;                                  #    2                            
  RMSD =     1.21 A
  TRANSFORM   -0.4960  0.8298  0.2558 -0.6929 -0.5558  0.4593 -0.5233 -0.0506 -0.8506    35.782   -15.660   106.443              
         T  <A  34   THR    > matches  <A 249   THR    >                        ( 11.2 A from    H1  ACT A 402  )
         K  <A  60   LYS    > matches  <A 252   LYS    >                        (  8.1 A from    H3  ACT A 403  )
         E  <A 124   GLU    > matches  <A 271   GLU    >                        (  8.2 A from    O   ACT A 402  )
 
KERBm  3*FOUND in 3f2b  size =    3  ^    DNA-DIRECTED DNA POLYMERASE III ALPHA CHAIN;            #    1                            
  RMSD =     1.22 A
  TRANSFORM    0.5986  0.2570 -0.7587 -0.6638 -0.3709 -0.6494  0.4483 -0.8924  0.0515   -27.514   -12.934     8.192              
         T  <A  34   THR    > matches  <A 358   THR    >                        ( 14.7 A from   MG    MG A   7  )
         K  <A  60   LYS    > matches  <A 362   LYS    >                        ( 21.4 A from   MG    MG A   7  )
         E  <A 124   GLU    > matches  <A 772   GLU    >                        (  5.9 A from    O3  PO4 A   2  )
 
KERBm  3*FOUND in 5yfc  size =    3  ^    DIPEPTIDYL PEPTIDASE 3;                                 #    1                            
  RMSD =     1.22 A
  TRANSFORM   -0.4578 -0.0472 -0.8878 -0.8690  0.2343  0.4357 -0.1875 -0.9710  0.1483    53.610    24.505     6.571              
         T  <A  34   THR    > matches  <A 264   THR    >                        ( 15.9 A from   CL    CL A 808  )
         K  <A  60   LYS    > matches  <A  34   LYS    >                        ( 10.5 A from   CL    CL A 808  )
         E  <A 124   GLU    > matches  <A 287   GLU    >                        ( 15.4 A from    N   TRS A 811  )
 
KERBm  3*FOUND in 4b9s  size =    3  ^    DNA POLYMERASE;                                         #    3                            
  RMSD =     1.22 A
  TRANSFORM   -0.7693  0.6346  0.0734  0.3500  0.5148 -0.7826  0.5344  0.5764  0.6182    48.130     4.841   -15.939              
         T  <A  34   THR    > matches  <A 497   THR    >                        ( 22.0 A from    O6  SUC A1883  )
         K  <A  60   LYS    > matches  <A 600   LYS    >                        ( 24.4 A from    O6  SUC A1883  )
         E  <A 124   GLU    > matches  <A 509   GLU    >                        ( 34.3 A from    O1  SO4 A1879  )
 
KERBm  3*FOUND in 3hg7  size =    3  ^    D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMIL     #    1                            
  RMSD =     1.22 A
  TRANSFORM    0.7578  0.6419  0.1170 -0.6423  0.7654 -0.0392  0.1147  0.0455 -0.9924    39.712    31.636    30.334              
         T  <A  34   THR    > matches  <A   7   THR    >                        ( 28.9 A from    C1  GOL A 501  )
         K  <A  60   LYS    > matches  <A   4+  LYS    >                        ( 33.0 A from    O2  GOL A 501  )
         E  <A 124   GLU    > matches  <A  54   GLU    >                        ( 12.8 A from    C1  GOL A 501  )
 
KERBm  3*FOUND in 5vha  size =    3  ^    DEAH (ASP-GLU-ALA-HIS) BOX POLYPEPTIDE 36;              #    1                            
  RMSD =     1.22 A
  TRANSFORM    0.5609 -0.2813  0.7786 -0.3168 -0.9419 -0.1120 -0.7649  0.1838  0.6174   -46.201     1.598    -9.415              
         T  <A  34   THR    > matches  <A 350   THR    > 
         K  <A  60   LYS    > matches  <A 353   LYS    > 
         E  <A 124   GLU    > matches  <A 639   GLU    > 
 
KERBm  3*FOUND in 3ffn  size =    3  ^    GELSOLIN;                                               #    1                            
  RMSD =     1.22 A
  TRANSFORM   -0.6766 -0.5586 -0.4798 -0.4910 -0.1434  0.8593  0.5488 -0.8170  0.1772    32.853    21.238    60.358              
         T  <A  34   THR    > matches  <A 715   THR    > 
         K  <A  60   LYS    > matches  <A 503   LYS    > 
         E  <A 124   GLU    > matches  <A 692   GLU    > 
 
KERBm  3*FOUND in 3fxb  size =    3  ^    TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT;           #    1                            
  RMSD =     1.22 A
  TRANSFORM    0.6341 -0.7226 -0.2753 -0.3982 -0.6104  0.6848  0.6629  0.3246  0.6747     2.253   -11.174    18.576              
         T  <A  34   THR    > matches  <A 198   THR    >                        ( 13.0 A from    OXT 4CS A 401  )
         K  <A  60   LYS    > matches  <A 129   LYS    >                        ( 16.6 A from    OXT 4CS A 401  )
         E  <A 124   GLU    > matches  <A 121   GLU    >                        (  4.5 A from    NAG 4CS A 401  )
 
KERBm  3*FOUND in 3dcp  size =    3  ^    HISTIDINOL-PHOSPHATASE;                                 #    1                            
  RMSD =     1.22 A
  TRANSFORM    0.3658 -0.3877  0.8461  0.1347 -0.8775 -0.4603 -0.9209 -0.2823  0.2688    29.799    75.229    -8.828              
         T  <A  34   THR    > matches  <A 271   THR    >                        ( 17.8 A from   FE    FE A 311  )
         K  <A  60   LYS    > matches  <A 275   LYS    >                        ( 17.4 A from   FE    FE A 310  )
         E  <A 124   GLU    > matches  <A  29   GLU    >                        ( 22.4 A from   FE    FE A 311  )
 
KERBm  3*FOUND in 3f8p  size =    3  ^    THIOREDOXIN REDUCTASE (TRXB-3);                         #    2                            
  RMSD =     1.22 A
  TRANSFORM   -0.6893 -0.6620 -0.2943 -0.7237  0.6478  0.2379 -0.0331 -0.3770  0.9256    91.940   -24.318    39.543              
         T  <A  34   THR    > matches  <A 253   THR    >                        ( 12.9 A from    N7A NAD A4001  )
         K  <A  60   LYS    > matches  <A 257   LYS    >                        ( 15.8 A from    N6A NAD A4001  )
         E  <A 124   GLU    > matches  <A  54   GLU    >                        (  9.3 A from    O2A NAD A4001  )
 
KERBm  3*FOUND in 5o1v  size =    3  ^    SERINE/THREONINE-PROTEIN KINASE WNK3;                   #    2                            
  RMSD =     1.22 A
  TRANSFORM   -0.9339 -0.3391  0.1129  0.0268  0.2485  0.9683  0.3564 -0.9073  0.2229    72.672   -11.438    24.962              
         T  <A  34   THR    > matches  <A 237   THR    >                        (  9.9 A from    O1  EDO A 504  )
         K  <A  60   LYS    > matches  <A 240   LYS    >                        ( 12.9 A from    O1  EDO A 504  )
         E  <A 124   GLU    > matches  <A 172   GLU    >                        ( 11.9 A from    O1  EDO A 501  )
 
KERBm  3*FOUND in 3hrg  size =    3  ^    UNCHARACTERIZED PROTEIN BT_3980 WITH ACTIN-LIKE ATP     #    1                            
  RMSD =     1.22 A
  TRANSFORM   -0.6579  0.7481 -0.0871 -0.3165 -0.3796 -0.8693  0.6834  0.5444 -0.4865    45.656    30.242   -36.907              
         T  <A  34   THR    > matches  <A  48   THR    >                        ( 10.4 A from    O8  UNL A 257  )
         K  <A  60   LYS    > matches  <A  52   LYS    >                        ( 15.8 A from    O8  UNL A 257  )
         E  <A 124   GLU    > matches  <A 188   GLU    >                        (  6.3 A from    O10 UNL A 257  )
 
KERBm  3*FOUND in 5odq  size =    3  ^    HETERODISULFIDE REDUCTASE, SUBUNIT A;                   #    5                            
  RMSD =     1.22 A
  TRANSFORM    0.9254 -0.3399 -0.1677 -0.1221 -0.6863  0.7170  0.3588  0.6430  0.6766     1.712   -64.414   -62.747              
         T  <A  34   THR    > matches  <A 622   THR    >                        (  4.7 A from    S1  SF4 A 708  )
         K  <A  60   LYS    > matches  <D  80   LYS    >                        (  7.0 A from    S1  SF4 A 708  )
         E  <A 124   GLU    > matches  <A 133   GLU    >                        ( 15.1 A from    S3  SF4 A 708  )
 
KERBm  3*FOUND in 4up7  size =    3  ^    LYSINE--TRNA LIGASE;                                    #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.4270  0.3126  0.8485 -0.9033 -0.1041 -0.4162  0.0418  0.9442 -0.3268   136.410   156.660    46.742              
         T  <A  34   THR    > matches  <A 486   THR    >                        (  9.1 A from    NZ  LAD A1584  )
         K  <A  60   LYS    > matches  <A 460   LYS    >                        ( 13.0 A from    NZ  LAD A1584  )
         E  <A 124   GLU    > matches  <A 284   GLU    >                        ( 19.2 A from    CE  LAD A1584  )
 
KERBm  3*FOUND in 1uar  size =    3  ^    RHODANESE;                                              #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.6320  0.4391  0.6385  0.1717 -0.7242  0.6679 -0.7557 -0.5317 -0.3823    29.995   -13.126    52.598              
         T  <A  34   THR    > matches  <A 214   THR    >                        ( 10.3 A from    O3  GOL A1901  )
         K  <A  60   LYS    > matches  <A 117   LYS    >                        (  5.9 A from    O3  GOL A1902  )
         E  <A 124   GLU    > matches  <A 226   GLU    >                        ( 30.5 A from    O3  GOL A1901  )
 
KERBm  3*FOUND in 6fea  size =    3  ^    NITROGENASE PROTEIN ALPHA CHAIN;                        #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.4800 -0.8757  0.0521  0.3993 -0.1652  0.9018  0.7811 -0.4537 -0.4290    87.586  -139.097    17.758              
         T  <A  34   THR    > matches  <B 261   THR    >                        ( 20.3 A from    S3B CLF A 506  )
         K  <A  60   LYS    > matches  <B 167   LYS    >                        ( 19.6 A from    S3B CLF A 506  )
         E  <A 124   GLU    > matches  <B 373   GLU    >                        ( 16.8 A from   ZN    ZN B 503  )
 
KERBm  3*FOUND in 3gwj  size =    3  ^    ARYLPHORIN;                                             #    2                            
  RMSD =     1.23 A
  TRANSFORM    0.7151 -0.4780 -0.5100 -0.3410  0.3983 -0.8515 -0.6102 -0.7828 -0.1218    -8.447   -12.106    20.657              
         T  <A  34   THR    > matches  <A 570   THR    >                        ( 23.1 A from    C8  NAG A 801  )
         K  <A  60   LYS    > matches  <A 574   LYS    >                        ( 25.7 A from    C8  NAG A 801  )
         E  <A 124   GLU    > matches  <A 153   GLU    >                        ( 20.0 A from    C8  NAG A 801  )
 
KERBm  3*FOUND in 1xyg  size =    3  ^    PUTATIVE N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTAS     #    1                            
  RMSD =     1.23 A
  TRANSFORM    0.1816  0.4272  0.8857  0.7820 -0.6089  0.1333 -0.5962 -0.6684  0.4447    18.715   -18.815    47.647              
         T  <A  34   THR    > matches  <A 258   THR    > 
         K  <A  60   LYS    > matches  <A 191   LYS    > 
         E  <A 124   GLU    > matches  <A 270   GLU    > 
 
KERBm  3*FOUND in 5fky  size =    3  ^    O-GLCNACASE BT_4395;                                    #    2                            
  RMSD =     1.23 A
  TRANSFORM    0.5954 -0.4152 -0.6879 -0.1726  0.7700 -0.6142 -0.7847 -0.4844 -0.3868    12.165    -8.550   -18.570              
         T  <A  34   THR    > matches  <A 571   THR    >                        ( 34.7 A from    O1  GOL A1716  )
         K  <A  60   LYS    > matches  <A 574   LYS    >                        ( 38.2 A from    O1  GOL A1716  )
         E  <A 124   GLU    > matches  <A 466   GLU    >                        ( 43.3 A from    O1  GOL A1716  )
 
KERBm  3*FOUND in 5xne  size =    3  ^    ALPHA-ACETOLACTATE DECARBOXYLASE;                       #    3                            
  RMSD =     1.23 A
  TRANSFORM    0.7728  0.6195 -0.1376 -0.4707  0.7049  0.5306 -0.4257  0.3453 -0.8364    -2.424    18.438    -5.863              
         T  <A  34   THR    > matches  <A 109   THR    >                        ( 20.9 A from   ZN    ZN A 301  )
         K  <A  60   LYS    > matches  <A 107   LYS    >                        ( 24.5 A from   ZN    ZN A 301  )
         E  <A 124   GLU    > matches  <A 248   GLU    >                        ( 15.5 A from   ZN    ZN A 301  )
 
KERBm  3*FOUND in 4oqp  size =    3  ^    DEOXYRIBONUCLEOSIDE REGULATOR;                          #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.0067  0.3957  0.9183  0.4836 -0.8026  0.3493 -0.8753 -0.4464  0.1860    -0.573   -31.776    34.981              
         T  <A  34   THR    > matches  <A 211   THR    >                        (  6.1 A from    O1P PED A 401  )
         K  <A  60   LYS    > matches  <A 283   LYS    >                        ( -2.7 A from    O1P PED A 401s )
         E  <A 124   GLU    > matches  <A 226   GLU    >                        ( -2.1 A from   CO  B CO A 406s )
 
KERBm  3*FOUND in 1f5n  size =    3  ^    INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 1;         #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.3561 -0.4985  0.7903 -0.8633 -0.1482 -0.4825 -0.3576  0.8541  0.3776    21.629    37.423    26.911              
         T  <A  34   THR    > matches  <A 549   THR    >                        ( 32.3 A from    O3G GNP A 593  )
         K  <A  60   LYS    > matches  <A 553   LYS    >                        ( 31.0 A from    O3G GNP A 593  )
         E  <A 124   GLU    > matches  <A 536   GLU    >                        ( 48.0 A from   MG    MG A 595  )
 
KERBm  3*FOUND in 3zds  size =    3  ^    HOMOGENTISATE 1,2-DIOXYGENASE;                          #    1                            
  RMSD =     1.23 A
  TRANSFORM    0.8470  0.5315 -0.0013 -0.4408  0.7011 -0.5605  0.2970 -0.4753 -0.8282   -22.357   -26.905    33.960              
         T  <A  34   THR    > matches  <A 373   THR    >                        (  9.1 A from    O3  M8O A2001  )
         K  <A  60   LYS    > matches  <A 376   LYS    >                        ( 13.3 A from    O3  M8O A2001  )
         E  <A 124   GLU    > matches  <A 396   GLU    >                        (  7.0 A from   FE    FE A2000  )
 
KERBm  3*FOUND in 1h8g  size =    3  ^    MAJOR AUTOLYSIN;                                        #    1                            
  RMSD =     1.23 A
  TRANSFORM    0.1298 -0.1655  0.9776  0.8055 -0.5574 -0.2013 -0.5782 -0.8136 -0.0609    14.230   -15.410   113.751              
         T  <A  34   THR    > matches  <A 300   THR    >                        (  6.8 A from    C7  CHT A 402  )
         K  <A  60   LYS    > matches  <A 296   LYS    >                        ( 10.5 A from    C8  CHT A 402  )
         E  <A 124   GLU    > matches  <A 253   GLU    >                        ( 12.8 A from    C7  CHT A 403  )
 
KERBm  3*FOUND in 3lqc  size =    3  ^    DNA REPAIR PROTEIN XRCC1;                               #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.0672 -0.9083 -0.4128 -0.5041  0.3880 -0.7716 -0.8610 -0.1563  0.4840    91.975    14.571    29.585              
         T  <A  34   THR    > matches  <A  29   THR    >                        ( 17.7 A from    O1  CO3 A 190  )
         K  <A  60   LYS    > matches  <A  32   LYS    >                        ( 22.4 A from    O1  CO3 A 190  )
         E  <A 124   GLU    > matches  <A  50   GLU    >                        ( 18.6 A from   NA    NA A 278  )
 
KERBm  3*FOUND in 5cw4  size =    3  ^    BRCA1/BRCA2-CONTAINING COMPLEX SUBUNIT 3;               #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.1717  0.2196  0.9604 -0.8488 -0.5278 -0.0310 -0.5001  0.8205 -0.2770    28.579   111.813   -49.248              
         T  <A  34   THR    > matches  <A 174   THR    >                        ( 12.7 A from    H11 GOL A 302  )
         K  <A  60   LYS    > matches  <A 178   LYS    >                        ( 13.9 A from    H2  GOL A 302  )
         E  <A 124   GLU    > matches  <B  21   GLU    >                        ( 13.4 A from    O2  GOL B 301  )
 
KERBm  3*FOUND in 5dik  size =    3  ^    ALKYL HYDROPEROXIDE REDUCTASE AHPD;                     #    2                            
  RMSD =     1.23 A
  TRANSFORM   -0.1583  0.7781 -0.6079 -0.8476 -0.4229 -0.3206  0.5065 -0.4644 -0.7264    26.071    51.295    51.540              
         T  <A  34   THR    > matches  <A  14   THR    > 
         K  <A  60   LYS    > matches  <A  18   LYS    > 
         E  <A 124   GLU    > matches  <A 106   GLU    > 
 
KERBm  3*FOUND in 1px5  size =    3  ^    2'-5'-OLIGOADENYLATE SYNTHETASE 1;                      #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.1573 -0.9783  0.1349 -0.8615  0.2027  0.4655  0.4827  0.0430  0.8747   103.294    -5.851   -11.369              
         T  <A  34   THR    > matches  <A 251   THR    >                        ( 10.8 A from    O4  SO4 A 801  )
         K  <A  60   LYS    > matches  <A 203   LYS    >                        ( 10.3 A from    O4  SO4 A 801  )
         E  <A 124   GLU    > matches  <A 322   GLU    >                        ( 22.8 A from    O4  SO4 A 803  )
 
KERBm  3*FOUND in 3ceu  size =    3  ^    THIAMINE PHOSPHATE PYROPHOSPHORYLASE;                   #    1                            
  RMSD =     1.23 A
  TRANSFORM   -0.2371 -0.9674  0.0893  0.9041 -0.2533 -0.3443 -0.3556  0.0009 -0.9346    60.701   -36.195    72.807              
         T  <A  34   THR    > matches  <A   8   THR    > 
         K  <A  60   LYS    > matches  <A  34   LYS    > 
         E  <A 124   GLU    > matches  <A 155   GLU    > 
 
KERBm  3*FOUND in 4zqe  size =    3  ^    1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE;        #    1                            
  RMSD =     1.23 A
  TRANSFORM    0.4391  0.6289 -0.6416 -0.8470  0.0516 -0.5290  0.2996 -0.7757 -0.5554    -2.153    42.836   -20.955              
         T  <A  34   THR    > matches  <A 402   THR    >                        ( 25.0 A from    O2  SO4 A 503  )
         K  <A  60   LYS    > matches  <A 406   LYS    >                        ( 29.2 A from    O2  SO4 A 503  )
         E  <A 124   GLU    > matches  <A 388   GLU    >                        (-13.8 A from    O1  GOL A 506s )
 
KERBm  3*FOUND in 5aee  size =    3  ^    ALPHA-GLUCOSIDASE YIHQ;                                 #    2                            
  RMSD =     1.23 A
  TRANSFORM   -0.3386  0.7317 -0.5916  0.0287 -0.6204 -0.7838  0.9405  0.2824 -0.1891    58.015    39.715    32.672              
         T  <A  34   THR    > matches  <A 444   THR    >                        ( 23.6 A from    C9  NSQ A1681  )
         K  <A  60   LYS    > matches  <A 446   LYS    >                        ( 24.8 A from    O15 NSQ A1681  )
         E  <A 124   GLU    > matches  <A 347   GLU    >                        ( 21.0 A from    O13 NSQ A1681  )
 
KERBm  3*FOUND in 2az4  size =    3  ^    HYPOTHETICAL PROTEIN EF2904;                            #    1                            
  RMSD =     1.23 A
  TRANSFORM    0.5281  0.6206 -0.5797 -0.7692  0.6388 -0.0168 -0.3599 -0.4547 -0.8147     2.011    -7.944    14.879              
         T  <A  34   THR    > matches  <A 320   THR    >                        ( 36.3 A from   ZN    ZN A 601  )
         K  <A  60   LYS    > matches  <A 323   LYS    >                        ( 40.3 A from   ZN    ZN A 601  )
         E  <A 124   GLU    > matches  <A 296   GLU    >                        ( 29.6 A from   ZN    ZN A 601  )
 
KERBm  3*FOUND in 3mmy  size =    3  ^    MRNA EXPORT FACTOR;                                     #    1                            
  RMSD =     1.23 A
  TRANSFORM    0.6755  0.3662  0.6401 -0.5723 -0.2871  0.7682 -0.4650  0.8852 -0.0156     7.106   -24.147    19.900              
         T  <A  34   THR    > matches  <A 310   THR    >                        ( 36.2 A from    O1S MES A1001  )
         K  <A  60   LYS    > matches  <A 307   LYS    >                        ( 38.2 A from    O1S MES A1001  )
         E  <A 124   GLU    > matches  <A  33   GLU    >                        ( 33.9 A from    O1S MES A1001  )
 
KERBm  3*FOUND in 2ix5  size =    3  ^    ACYL-COENZYME A OXIDASE 4, PEROXISOMAL;                 #    3                            
  RMSD =     1.23 A
  TRANSFORM    0.7698 -0.0591  0.6356  0.5253 -0.5071 -0.6833 -0.3627 -0.8599  0.3593    14.566   -26.228    13.087              
         T  <A  34   THR    > matches  <A 116   THR    >                        ( 22.3 A from    O5P CAA A1432  )
         K  <A  60   LYS    > matches  <A 349   LYS    >                        ( 24.8 A from    O5P CAA A1432  )
         E  <A 124   GLU    > matches  <A  68   GLU    >                        ( 29.9 A from    C7M FAD A1433  )
 
KERBm  3*FOUND in 3b9w  size =    3  ^    AMMONIUM TRANSPORTER FAMILY;                            #    1                            
  RMSD =     1.24 A
  TRANSFORM   -0.1095 -0.3838  0.9169 -0.9933  0.0760 -0.0868  0.0363  0.9203  0.3895   -47.817    20.887     4.074              
         T  <A  34   THR    > matches  <A 349   THR    >                        (  7.7 A from    O1  GOL A 409  )
         K  <A  60   LYS    > matches  <A 345   LYS    >                        ( 13.7 A from    O1  GOL A 409  )
         E  <A 124   GLU    > matches  <A 367   GLU    >                        ( 13.9 A from    O1  GOL A 409  )
 
KERBm  3*FOUND in 4q34  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.1270  0.6730 -0.7287  0.5715  0.5508  0.6083 -0.8107  0.4937  0.3146    73.258   -78.052    -3.488              
         T  <A  34   THR    > matches  <A 203   THR    >                        (  8.5 A from    O3  GOL A 406  )
         K  <A  60   LYS    > matches  <A 206   LYS    >                        ( 12.7 A from    O3  GOL A 406  )
         E  <A 124   GLU    > matches  <A  81   GLU    >                        ( -3.6 A from    O3  GOL A 404s )
 
KERBm  3*FOUND in 5dgk  size =    3  ^    ACTIVE HELICASE;                                        #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.6930  0.6964  0.1866 -0.3434  0.5464 -0.7639  0.6339 -0.4653 -0.6178   -57.665   126.084   128.295              
         T  <A  34   THR    > matches  <A 405   THR    >                        ( 28.5 A from    O2A ANP A 701  )
         K  <A  60   LYS    > matches  <A 408   LYS    >                        ( 31.0 A from   HN61 ANP A 701  )
         E  <A 124   GLU    > matches  <A 120   GLU    >                        ( 34.0 A from   MG    MG A 702  )
 
KERBm  3*FOUND in 3l9w  size =    3  ^    GLUTATHIONE-REGULATED POTASSIUM-EFFLUX SYSTEM PROTE     #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.5580 -0.8201  0.1271  0.1066 -0.0811 -0.9910 -0.8230 -0.5665 -0.0421    43.676    -8.186    10.706              
         T  <A  34   THR    > matches  <A 437   THR    >                        ( 10.2 A from    O3' AMP A2401  )
         K  <A  60   LYS    > matches  <A 440   LYS    >                        ( 16.4 A from    O3' AMP A2401  )
         E  <A 124   GLU    > matches  <A 517   GLU    >                        (  5.6 A from    O3P AMP A2401  )
 
KERBm  3*FOUND in 5xgu  size =    3  ^    RIBONUCLEASE R;                                         #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.2431  0.0062 -0.9700 -0.9091  0.3503 -0.2256 -0.3384 -0.9366 -0.0908   -47.225   -35.709    57.955              
         T  <A  34   THR    > matches  <A 272   THR    >                        ( 22.8 A from   MG    MG A 701  )
         K  <A  60   LYS    > matches  <A 202   LYS    >                        ( 27.0 A from   MG    MG A 701  )
         E  <A 124   GLU    > matches  <A 389   GLU    >                        ( 25.8 A from   MG    MG A 701  )
 
KERBm  3*FOUND in 2zsj  size =    3  ^    THREONINE SYNTHASE;                                     #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.1571  0.8271 -0.5397 -0.8644 -0.1492 -0.4802  0.4776 -0.5419 -0.6915    36.645   -22.718    20.860              
         T  <A  34   THR    > matches  <A  90   THR    >                        (  6.5 A from    C4A PLP A1101  )
         K  <A  60   LYS    > matches  <A  63   LYS    >                        ( -1.3 A from    C4A PLP A1101s )
         E  <A 124   GLU    > matches  <A 148   GLU    >                        ( 24.9 A from    O1P PLP A1101  )
 
KERBm  3*FOUND in 3ip4  size =    3  ^    GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A;          #    2                            
  RMSD =     1.24 A
  TRANSFORM    0.0162 -0.8324 -0.5540  0.9948  0.0693 -0.0751 -0.1009  0.5499 -0.8291    -1.420     9.545   -10.765              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( 30.8 A from   MG    MG B 802  )
         K  <A  60   LYS    > matches  <A 110   LYS    >                        ( 35.9 A from   MG    MG B 802  )
         E  <A 124   GLU    > matches  <A 316   GLU    >                        ( 23.0 A from   MG    MG B 802  )
 
KERBm  3*FOUND in 4uci  size =    3  ^    RNA-DIRECTED RNA POLYMERASE L;                          #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.0121 -0.8474  0.5308  0.9285 -0.1875 -0.3205 -0.3711 -0.4968 -0.7846    48.193    17.585    -6.251              
         T  <A  34   THR    > matches  <A1648   THR    >                        ( 20.3 A from    O1G GTP A2410  )
         K  <A  60   LYS    > matches  <A1646   LYS    >                        ( 18.5 A from   HO2' ADN A2414  )
         E  <A 124   GLU    > matches  <A1972   GLU    >                        ( 10.6 A from    O1G GTP A2410  )
 
KERBm  3*FOUND in 5afo  size =    3  ^    FIMBRIAE;                                               #    1                            
  RMSD =     1.24 A
  TRANSFORM   -0.8771 -0.2498 -0.4102 -0.4649  0.6564  0.5942 -0.1208 -0.7119  0.6918    93.999   -77.780    42.120              
         T  <A  34   THR    > matches  <A 299   THR    >                        ( 76.2 A from    O2  GOL A1001  )
         K  <A  60   LYS    > matches  <A 217   LYS    >                        ( 82.0 A from    O2  GOL A1001  )
         E  <A 124   GLU    > matches  <A 324   GLU    >                        ( 60.1 A from    O1  GOL A1001  )
 
KERBm  3*FOUND in 4hsc  size =    3  ^    STREPTOLYSIN O;                                         #    2                            
  RMSD =     1.24 A
  TRANSFORM    0.5633  0.2864 -0.7750  0.5859  0.5229  0.6191 -0.5826  0.8028 -0.1268    64.817   -46.262     9.634              
         T  <A  34   THR    > matches  <X 569   THR    > 
         K  <A  60   LYS    > matches  <X 571   LYS    > 
         E  <A 124   GLU    > matches  <X 529   GLU    > 
 
KERBm  3*FOUND in 3zq6  size =    3  ^    PUTATIVE ARSENICAL PUMP-DRIVING ATPASE;                 #    2                            
  RMSD =     1.24 A
  TRANSFORM    0.0539  0.6332 -0.7721 -0.9982  0.0544 -0.0251 -0.0261 -0.7721 -0.6350    82.426    28.803    48.320              
         T  <A  34   THR    > matches  <A 146   THR    >                        (  8.0 A from    F2  ALF A 402  )
         K  <A  60   LYS    > matches  <A  27   LYS    >                        (  2.5 A from    O3B ADP A 401s )
         E  <A 124   GLU    > matches  <A 160   GLU    >                        ( 25.5 A from    F3  ALF A 402  )
 
KERBm  3*FOUND in 3elf  size =    3  ^    FRUCTOSE-BISPHOSPHATE ALDOLASE;                         #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.2557 -0.1794  0.9500 -0.7958  0.5189  0.3122  0.5490  0.8358  0.0101     0.495   -36.263   -29.902              
         T  <A  34   THR    > matches  <A  54   THR    >                        (  6.3 A from    O61 2FP A 350  )
         K  <A  60   LYS    > matches  <A 101   LYS    >                        (  7.9 A from    O61 2FP A 350  )
         E  <A 124   GLU    > matches  <A  32   GLU    >                        ( 16.1 A from    O63 2FP A 350  )
 
KERBm  3*FOUND in 4jhy  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.3237  0.4830  0.8136 -0.9438  0.2262  0.2412  0.0675  0.8459 -0.5291   -22.261    -7.333    12.437              
         T  <A  34   THR    > matches  <A  81   THR    > 
         K  <A  60   LYS    > matches  <A  79   LYS    > 
         E  <A 124   GLU    > matches  <A 168   GLU    > 
 
KERBm  3*FOUND in 5xkt  size =    3  ^    UREASE ACCESSORY PROTEIN UREG;                          #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.1338  0.8668 -0.4804 -0.3072  0.4972  0.8114 -0.9422 -0.0390 -0.3328     3.384     6.354    21.344              
         T  <A  34   THR    > matches  <A  58   THR    >                        ( 11.0 A from    O1A GNP A 301  )
         K  <A  60   LYS    > matches  <A  29   LYS    >                        ( 11.9 A from    O1A GNP A 301  )
         E  <A 124   GLU    > matches  <A  68   GLU    >                        ( 13.6 A from    O3G GNP A 301  )
 
KERBm  3*FOUND in 1xki  size =    3  ^    VON EBNER'S GLAND PROTEIN;                              #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.4799  0.8709  0.1062  0.4734 -0.3589  0.8044 -0.7386  0.3358  0.5845   -15.399    -5.940    20.747              
         T  <A  34   THR    > matches  <A  40   THR    >                        ( 16.7 A from   CL    CL A1005  )
         K  <A  60   LYS    > matches  <A  52   LYS    >                        ( 21.5 A from   CL    CL A1005  )
         E  <A 124   GLU    > matches  <A 125   GLU    >                        ( -2.5 A from   ZN    ZN A1002s )
 
KERBm  3*FOUND in 4kt6  size =    3  ^    NICOTINE ADENINE DINUCLEOTIDE GLYCOHYDROLASE;           #    1                            
  RMSD =     1.24 A
  TRANSFORM    0.5905 -0.3317  0.7357  0.2421 -0.7968 -0.5536 -0.7699 -0.5051  0.3902    15.542    -7.078    11.481              
         T  <A  34   THR    > matches  <A 292   THR    > 
         K  <A  60   LYS    > matches  <A 400   LYS    > 
         E  <A 124   GLU    > matches  <A 391   GLU    > 
 
KERBm  3*FOUND in 2zxd  size =    3  ^    ALPHA-L-FUCOSIDASE, PUTATIVE;                           #    3                            
  RMSD =     1.24 A
  TRANSFORM    0.3335 -0.9184 -0.2128  0.8684  0.2115  0.4485  0.3669  0.3344 -0.8681    54.730   -29.572    11.170              
         T  <A  34   THR    > matches  <A 332   THR    >                        ( 21.2 A from    OAE ZXD A 901  )
         K  <A  60   LYS    > matches  <A 104   LYS    >                        ( 25.7 A from    OAD ZXD A 901  )
         E  <A 124   GLU    > matches  <A 346   GLU    >                        ( 27.4 A from    CAA ZXD A 901  )
 
KERBm  3*FOUND in 2b39  size =    3  ^    C3;                                                     #    1                            
  RMSD =     1.25 A
  TRANSFORM   -0.9808  0.0528  0.1876 -0.1626  0.3097 -0.9368  0.1075  0.9494  0.2951    84.635    57.417   -54.156              
         T  <A  34   THR    > matches  <A1330   THR    >                        ( 22.3 A from    C6  NAG A2001  )
         K  <A  60   LYS    > matches  <A1332   LYS    >                        ( 27.1 A from    C8  NAG A2002  )
         E  <A 124   GLU    > matches  <A1612   GLU    >                        ( 21.3 A from    C1  NAG A2001  )
 
KERBm  3*FOUND in 3hol  size =    3  ^    TBPB;                                                   #    1                            
  RMSD =     1.25 A
  TRANSFORM   -0.2050 -0.9786 -0.0152  0.9437 -0.1935 -0.2683 -0.2596  0.0694 -0.9632    83.435   -30.405    13.308              
         T  <A  34   THR    > matches  <A 451   THR    > 
         K  <A  60   LYS    > matches  <A 466   LYS    > 
         E  <A 124   GLU    > matches  <A  25   GLU    > 
 
KERBm  3*FOUND in 4hsc  size =    3  ^    STREPTOLYSIN O;                                         #    1                            
  RMSD =     1.25 A
  TRANSFORM   -0.1994  0.2410  0.9498  0.8860 -0.3697  0.2798 -0.4185 -0.8974  0.1398   -21.377   -13.538    32.461              
         T  <A  34   THR    > matches  <X 461   THR    > 
         K  <A  60   LYS    > matches  <X 551   LYS    > 
         E  <A 124   GLU    > matches  <X 150   GLU    > 
 
KERBm  3*FOUND in 4nuy  size =    3  ^    ENDO-BETA-N-ACETYLGLUCOSAMINIDASE F2;                   #    3                            
  RMSD =     1.25 A
  TRANSFORM   -0.7129 -0.6814 -0.1657  0.6914 -0.6434 -0.3286 -0.1173  0.3488 -0.9298    41.620     9.656    82.598              
         T  <A  34   THR    > matches  <A 442   THR    >                        ( 70.7 A from   CA    CA A1001  )
         K  <A  60   LYS    > matches  <A 446   LYS    >                        ( 70.5 A from   CA    CA A1001  )
         E  <A 124   GLU    > matches  <A 139   GLU    >                        ( 76.0 A from   CA    CA A1001  )
 
KERBm  3*FOUND in 3o0q  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE;                   #    2                            
  RMSD =     1.25 A
  TRANSFORM    0.5404 -0.6762  0.5008  0.6857  0.6988  0.2037  0.4877 -0.2333 -0.8413    53.790    97.547    62.198              
         T  <A  34   THR    > matches  <A 288   THR    >                        (  7.1 A from   CL    CL A1005  )
         K  <A  60   LYS    > matches  <A 292   LYS    >                        (  9.5 A from   CL    CL A1005  )
         E  <A 124   GLU    > matches  <A 263   GLU    >                        ( 24.4 A from   CL    CL A1005  )
 
KERBm  3*FOUND in 4uwh  size =    3  ^    PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT TYP     #    1                            
  RMSD =     1.25 A
  TRANSFORM    0.5940 -0.5284  0.6066 -0.4623 -0.8413 -0.2801 -0.6584  0.1140  0.7440    14.387   -25.224    24.365              
         T  <A  34   THR    > matches  <A 804   THR    >                        ( 16.7 A from   NA    NA A1874  )
         K  <A  60   LYS    > matches  <A 800   LYS    >                        ( 17.1 A from   NA    NA A1874  )
         E  <A 124   GLU    > matches  <A 361   GLU    >                        ( 22.5 A from   NA    NA A1874  )
 
KERBm  3*FOUND in 2vqe  size =    3  ^    16S RRNA;                                               #    1                            
  RMSD =     1.25 A
  TRANSFORM   -0.7777  0.3636  0.5129  0.4952 -0.1484  0.8560 -0.3873 -0.9197  0.0646   172.488  -120.151   236.963              
         T  <A  34   THR    > matches  <U   8   THR    >                        (-16.7 A from   MG    MG M 201s )
         K  <A  60   LYS    > matches  <U   2+  LYS    >                        ( 19.7 A from   MG    MG M 201  )
         E  <A 124   GLU    > matches  <M  32   GLU    >                        ( 14.4 A from   MG    MG M 201  )
 
KERBm  3*FOUND in 5swb  size =    3  ^    EXTRACELLULAR SOLUTE-BINDING PROTEIN;                   #    1                            
  RMSD =     1.25 A
  TRANSFORM   -0.8567 -0.4983  0.1331 -0.4907  0.8669  0.0874  0.1590 -0.0096  0.9872     9.556   -19.631    72.605              
         T  <A  34   THR    > matches  <A 446   THR    >                        ( 10.9 A from    O6  MAN A 506  )
         K  <A  60   LYS    > matches  <A 206   LYS    >                        (  8.8 A from   CD    CD A 510  )
         E  <A 124   GLU    > matches  <A 464   GLU    >                        ( 19.0 A from   CD    CD A 507  )
 
KERBm  3*FOUND in 5my8  size =    3  ^    SRSF PROTEIN KINASE 1,SRSF PROTEIN KINASE 1;            #    1                            
  RMSD =     1.25 A
  TRANSFORM   -0.1788  0.7276 -0.6623  0.9325  0.3400  0.1218 -0.3138  0.5958  0.7393    12.759   -43.341   -32.676              
         T  <A  34   THR    > matches  <A  93   THR    >                        (  6.9 A from    C8  RXZ A 724  )
         K  <A  60   LYS    > matches  <A  85   LYS    >                        (  9.3 A from    C1  EDO A 704  )
         E  <A 124   GLU    > matches  <A 115   GLU    >                        ( 18.8 A from    O1  EDO A 707  )
 
KERBm  3*FOUND in 4xnh  size =    3  ^    N-TERMINAL ACETYLTRANSFERASE A COMPLEX SUBUNIT NAT1     #    2                            
  RMSD =     1.25 A
  TRANSFORM    0.1381  0.8948 -0.4245 -0.9671  0.0294 -0.2526  0.2136 -0.4454 -0.8695   -14.713    -3.037    -7.660              
         T  <A  34   THR    > matches  <A 249   THR    >                        ( 30.3 A from    O23 I6P A 901  )
         K  <A  60   LYS    > matches  <A 253   LYS    >                        ( 33.4 A from    O23 I6P A 901  )
         E  <A 124   GLU    > matches  <B 143   GLU    >                        ( 21.6 A from    O2A CMC B 301  )
 
KERBm  3*FOUND in 3cuq  size =    3  ^    VACUOLAR-SORTING PROTEIN SNF8;                          #    1                            
  RMSD =     1.25 A
  TRANSFORM    0.7045  0.6765 -0.2146  0.4058 -0.6321 -0.6601  0.5822 -0.3780  0.7198    17.399    13.335    57.677              
         T  <A  34   THR    > matches  <C  25   THR    > 
         K  <A  60   LYS    > matches  <C  28   LYS    > 
         E  <A 124   GLU    > matches  <A 231   GLU    > 
 
KERBm  3*FOUND in 3wfa  size =    3  ^    ALPHA-GLUCOSIDASE;                                      #    1                            
  RMSD =     1.26 A
  TRANSFORM   -0.3023  0.5496  0.7788  0.4148 -0.6598  0.6266 -0.8583 -0.5124  0.0285    -1.598   -12.871    19.337              
         T  <A  34   THR    > matches  <A 130   THR    >                        ( 23.8 A from    O13 EDT A 802  )
         K  <A  60   LYS    > matches  <A  99   LYS    >                        ( 27.2 A from    O13 EDT A 802  )
         E  <A 124   GLU    > matches  <A 311   GLU    >                        ( 11.8 A from    O13 EDT A 802  )
 
KERBm  3*FOUND in 3o0q  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE;                   #    1                            
  RMSD =     1.26 A
  TRANSFORM   -0.4139  0.2632  0.8715 -0.4963  0.7373 -0.4584  0.7631  0.6222  0.1745     4.917   -11.688   107.019              
         T  <A  34   THR    > matches  <A 380   THR    >                        ( 18.4 A from    O2' GDP A1003  )
         K  <A  60   LYS    > matches  <A 384   LYS    >                        ( 22.2 A from    O2' GDP A1003  )
         E  <A 124   GLU    > matches  <A 144   GLU    >                        (  9.2 A from    O2A TTP A1001  )
 
KERBm  3*FOUND in 4nyz  size =    3  ^    GENOME POLYPROTEIN;                                     #    2                            
  RMSD =     1.26 A
  TRANSFORM    0.3913  0.5090 -0.7667  0.5088 -0.8139 -0.2806  0.7668  0.2803  0.5775    39.910   -22.744    50.442              
         T  <A  34   THR    > matches  <A 350   THR    >                        ( 16.8 A from    OXT GLN A 501  )
         K  <A  60   LYS    > matches  <A 354   LYS    >                        ( 18.6 A from    OXT GLN A 501  )
         E  <A 124   GLU    > matches  <A 371   GLU    >                        ( 27.5 A from    N   GLN A 501  )
 
KERBm  3*FOUND in 1xvi  size =    3  ^    PUTATIVE MANNOSYL-3-PHOSPHOGLYCERATE PHOSPHATASE;       #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.6452 -0.2124 -0.7339  0.2136 -0.8721  0.4402  0.7335  0.4408  0.5174    12.742    13.194     8.664              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( 23.9 A from    O4  SO4 A 501  )
         K  <A  60   LYS    > matches  <A 110   LYS    >                        ( 28.4 A from    O4  SO4 A 501  )
         E  <A 124   GLU    > matches  <A  71   GLU    >                        ( 11.8 A from    O2  SO4 A 501  )
 
KERBm  3*FOUND in 1oe4  size =    3  ^    SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA       #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.3537  0.8977 -0.2627  0.8616 -0.2034  0.4650 -0.3640  0.3908  0.8455    12.488   -12.086   -26.848              
         T  <A  34   THR    > matches  <A  82   THR    >                        ( 15.2 A from    O2  GOL A1282  )
         K  <A  60   LYS    > matches  <A  85   LYS    >                        ( 20.0 A from    O1  GOL A1282  )
         E  <A 124   GLU    > matches  <A 111   GLU    >                        (  5.1 A from    O3  GOL A1281  )
 
KERBm  3*FOUND in 2ogj  size =    3  ^    DIHYDROOROTASE;                                         #    1                            
  RMSD =     1.26 A
  TRANSFORM   -0.7723  0.6071 -0.1870  0.6257  0.7778 -0.0588 -0.1098  0.1624  0.9806    27.079   -68.481    -8.043              
         T  <A  34   THR    > matches  <A 102   THR    >                        ( 16.1 A from    CD  KCX A 175  )
         K  <A  60   LYS    > matches  <A 130   LYS    >                        ( 15.7 A from    N   KCX A 175  )
         E  <A 124   GLU    > matches  <A 319   GLU    >                        ( 28.2 A from    OQ2 KCX A 175  )
 
KERBm  3*FOUND in 2zf8  size =    3  ^    COMPONENT OF SODIUM-DRIVEN POLAR FLAGELLAR MOTOR;       #    1                            
  RMSD =     1.26 A
  TRANSFORM   -0.5954 -0.3631 -0.7167  0.5843 -0.8080 -0.0761  0.5515  0.4641 -0.6932    56.817   -16.904    18.476              
         T  <A  34   THR    > matches  <A 100   THR    > 
         K  <A  60   LYS    > matches  <A  87   LYS    > 
         E  <A 124   GLU    > matches  <A  24   GLU    > 
 
KERBm  3*FOUND in 2zj8  size =    3  ^    PUTATIVE SKI2-TYPE HELICASE;                            #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.5110  0.6469 -0.5660 -0.7897  0.0932 -0.6064  0.3395 -0.7568 -0.5585    51.945     7.370    19.686              
         T  <A  34   THR    > matches  <A 424   THR    > 
         K  <A  60   LYS    > matches  <A 488   LYS    > 
         E  <A 124   GLU    > matches  <A 431   GLU    > 
 
KERBm  3*FOUND in 1srq  size =    3  ^    GTPASE-ACTIVATING PROTEIN 1;                            #    1                            
  RMSD =     1.26 A
  TRANSFORM   -0.6614 -0.1148 -0.7412  0.5426  0.6090 -0.5785 -0.5178  0.7848  0.3405   227.477  -161.684   -76.743              
         T  <A  34   THR    > matches  <A 252   THR    >                        ( 29.3 A from    C1  MPD A9003  )
         K  <A  60   LYS    > matches  <A 232   LYS    >                        ( 30.4 A from    C1  MPD A9003  )
         E  <A 124   GLU    > matches  <A 276   GLU    >                        ( 39.4 A from    C5  MPD A9003  )
 
KERBm  3*FOUND in 1xyz  size =    3  ^    1,4-BETA-D-XYLAN-XYLANOHYDROLASE;                       #    1                            
  RMSD =     1.26 A
  TRANSFORM   -0.6732 -0.2745 -0.6866  0.6406  0.2474 -0.7270 -0.3695  0.9292 -0.0093    68.330    18.241    20.528              
         T  <A  34   THR    > matches  <A 627   THR    > 
         K  <A  60   LYS    > matches  <A 623   LYS    > 
         E  <A 124   GLU    > matches  <A 587   GLU    > 
 
KERBm  3*FOUND in 5urj  size =    3  ^    U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASE     #    3                            
  RMSD =     1.26 A
  TRANSFORM   -0.1886 -0.9789  0.0787  0.9814 -0.1908 -0.0202 -0.0348 -0.0735 -0.9967   -14.603   112.635   155.366              
         T  <A  34   THR    > matches  <A1414   THR    >                        ( 35.0 A from    O2  GOL A2201  )
         K  <A  60   LYS    > matches  <A1417   LYS    >                        ( 39.0 A from    O2  GOL A2201  )
         E  <A 124   GLU    > matches  <A1913   GLU    >                        ( 27.5 A from    O25 8LS A2202  )
 
KERBm  3*FOUND in 2xij  size =    3  ^    METHYLMALONYL-COA MUTASE, MITOCHONDRIAL;                #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.6597  0.0997 -0.7449  0.0678  0.9792  0.1911 -0.7484  0.1766 -0.6393    -7.192   -33.184    -5.467              
         T  <A  34   THR    > matches  <A 566   THR    >                        (  8.8 A from    O1  SO4 A1748  )
         K  <A  60   LYS    > matches  <A 570   LYS    >                        (  4.6 A from    O1  SO4 A1748  )
         E  <A 124   GLU    > matches  <A 205   GLU    >                        ( 18.2 A from    O1  EDO A1753  )
 
KERBm  3*FOUND in 6avz  size =    3  ^    HOPQ;                                                   #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.4867  0.5941 -0.6404  0.8574 -0.4654  0.2198  0.1675  0.6561  0.7359    38.523    -0.774    39.014              
         T  <A  34   THR    > matches  <B 257   THR    >                        ( 15.2 A from   CA    CA B 501  )
         K  <A  60   LYS    > matches  <B 244   LYS    >                        ( 19.0 A from   CA    CA B 501  )
         E  <A 124   GLU    > matches  <B 389   GLU    >                        ( 17.1 A from   CA    CA B 501  )
 
KERBm  3*FOUND in 2aml  size =    3  ^    SIS DOMAIN PROTEIN;                                     #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.5825 -0.8090 -0.0792 -0.7568 -0.5042 -0.4159 -0.2966 -0.3022  0.9059    32.803    58.742    48.729              
         T  <A  34   THR    > matches  <A 216   THR    >                        ( 23.9 A from    O3  PO4 A 362  )
         K  <A  60   LYS    > matches  <A 214   LYS    >                        ( 23.3 A from    O3  PO4 A 362  )
         E  <A 124   GLU    > matches  <A 313   GLU    >                        ( 26.0 A from    O1  PO4 A 362  )
 
KERBm  3*FOUND in 5lte  size =    3  ^    HEME DEPENDENT OXIDATIVE N-DEMETHYLASE;                 #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.4410  0.8940 -0.0786  0.4003 -0.2743 -0.8743  0.8033 -0.3542  0.4789   -21.012    27.598   -26.738              
         T  <A  34   THR    > matches  <A 228   THR    >                        (  5.1 A from    O2D HEM A 501  )
         K  <A  60   LYS    > matches  <A 318   LYS    >                        ( -2.7 A from    O2D HEM A 501s )
         E  <A 124   GLU    > matches  <A   9   GLU    >                        ( 23.6 A from    O2D HEM A 501  )
 
KERBm  3*FOUND in 5uao  size =    3  ^    TRYPTOPHANE-5-HALOGENASE;                               #    2                            
  RMSD =     1.26 A
  TRANSFORM   -0.4302 -0.1345  0.8926  0.5223 -0.8436  0.1246 -0.7363 -0.5199 -0.4332   -16.123   -12.722    76.615              
         T  <A  34   THR    > matches  <A 274   THR    >                        (  6.6 A from    O4  FAD A 601  )
         K  <A  60   LYS    > matches  <A 102   LYS    >                        (  6.9 A from    O4  FAD A 601  )
         E  <A 124   GLU    > matches  <A 312   GLU    >                        ( 16.1 A from    C7M FAD A 601  )
 
KERBm  3*FOUND in 4m7s  size =    3  ^    BTRN;                                                   #    1                            
  RMSD =     1.26 A
  TRANSFORM   -0.8260 -0.5631 -0.0243  0.3856 -0.5961  0.7043  0.4110 -0.5724 -0.7095   112.650   -55.824   -33.665              
         T  <A  34   THR    > matches  <A 215   THR    >                        (  7.7 A from    O3  GOL A 503  )
         K  <A  60   LYS    > matches  <A 219   LYS    >                        (  7.9 A from    O3  GOL A 503  )
         E  <A 124   GLU    > matches  <A 202   GLU    >                        ( 14.4 A from    C5  IMD A 505  )
 
KERBm  3*FOUND in 4gpv  size =    3  ^    PUTATIVE CELL ADHESION PROTEIN;                         #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.7620 -0.4499  0.4658  0.6266  0.6938 -0.3549  0.1635 -0.5623 -0.8106    17.605  -107.647    34.483              
         T  <A  34   THR    > matches  <A 321   THR    >                        ( 15.7 A from    O2  TRS A 401  )
         K  <A  60   LYS    > matches  <A 184   LYS    >                        ( 18.5 A from    O2  TRS A 401  )
         E  <A 124   GLU    > matches  <A 313   GLU    >                        ( 21.1 A from    O1  TRS A 401  )
 
KERBm  3*FOUND in 3vm7  size =    3  ^    ALPHA-AMYLASE;                                          #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.0524 -0.9975 -0.0475  0.3337 -0.0273  0.9423  0.9412  0.0652 -0.3315    72.863   -42.867    12.578              
         T  <A  34   THR    > matches  <A 105   THR    >                        ( 14.2 A from    C1  NAG A 502  )
         K  <A  60   LYS    > matches  <A  88   LYS    >                        ( 16.2 A from    O5  NAG A 502  )
         E  <A 124   GLU    > matches  <A 171   GLU    >                        ( 10.4 A from    O4  GLC A 503  )
 
KERBm  3*FOUND in 2rb9  size =    3  ^    HYPE PROTEIN;                                           #    1                            
  RMSD =     1.26 A
  TRANSFORM    0.8487  0.4425  0.2896 -0.3375  0.0316  0.9408 -0.4071  0.8962 -0.1762  -104.738    20.005    76.059              
         T  <A  34   THR    > matches  <A 175   THR    > 
         K  <A  60   LYS    > matches  <A 252   LYS    > 
         E  <A 124   GLU    > matches  <A 233   GLU    > 
 
KERBm  3*FOUND in 4pf1  size =    3  ^    PEPTIDASE S15/COCE/NOND;                                #    1                            
  RMSD =     1.26 A
  TRANSFORM   -0.8431  0.1642  0.5120  0.4884  0.6321  0.6015  0.2249 -0.7572  0.6132     5.726  -124.622     8.213              
         T  <A  34   THR    > matches  <A  57   THR    >                        ( 23.6 A from    O3  PGE A 701  )
         K  <A  60   LYS    > matches  <A 362   LYS    >                        ( 18.2 A from    O4  PGE A 701  )
         E  <A 124   GLU    > matches  <A  33   GLU    >                        ( 25.3 A from    C1  GOL A 705  )
 
KERBm  3*FOUND in 5j1s  size =    3  ^    TORSIN-1A;                                              #    2                            
  RMSD =     1.27 A
  TRANSFORM   -0.7063  0.6723 -0.2219  0.5115  0.2679 -0.8165  0.4895  0.6901  0.5330     8.601    -4.285    40.196              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( -4.9 A from    O1B ATP A 401s )
         K  <A  60   LYS    > matches  <A 108   LYS    >                        ( -2.7 A from    O3G ATP A 401s )
         E  <A 124   GLU    > matches  <A 302   GLU    >                        ( 20.0 A from    O4' ATP A 401  )
 
KERBm  3*FOUND in 3jwg  size =    3  ^    METHYLTRANSFERASE TYPE 12;                              #    1                            
  RMSD =     1.27 A
  TRANSFORM   -0.4947 -0.6771 -0.5448 -0.7758  0.6266 -0.0742 -0.3916 -0.3860  0.8353    44.165    28.637    47.017              
         T  <A  34   THR    > matches  <A 173   THR    >                        ( 22.8 A from   MG    MG A 220  )
         K  <A  60   LYS    > matches  <A 177   LYS    >                        ( 24.6 A from   MG    MG A 220  )
         E  <A 124   GLU    > matches  <A 197   GLU    >                        ( 29.9 A from   MG    MG A 220  )
 
KERBm  3*FOUND in 1ysp  size =    3  ^    TRANSCRIPTIONAL REGULATOR KDGR;                         #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.7241 -0.0058  0.6897 -0.2086 -0.9550  0.2110 -0.6574  0.2967  0.6927   -20.181    20.929    61.905              
         T  <A  34   THR    > matches  <A  21   THR    >                        ( 18.6 A from    O2  SO4 A 180  )
         K  <A  60   LYS    > matches  <A  37   LYS    >                        ( 21.1 A from    O2  SO4 A 180  )
         E  <A 124   GLU    > matches  <A 149   GLU    >                        ( 24.9 A from    O2  SO4 A 180  )
 
KERBm  3*FOUND in 4y04  size =    3  ^    PEPTIDASE S46;                                          #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.4099  0.2744 -0.8699 -0.4638 -0.7584 -0.4578  0.7854 -0.5912  0.1836    16.881    15.627    -4.820              
         T  <A  34   THR    > matches  <A 132   THR    >                        ( 24.1 A from    K     K A 802  )
         K  <A  60   LYS    > matches  <A 136   LYS    >                        ( 25.1 A from    K     K A 802  )
         E  <A 124   GLU    > matches  <A  47   GLU    >                        ( 20.1 A from    O1  GOL A 803  )
 
KERBm  3*FOUND in 4nsx  size =    3  ^    U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 21;           #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.9812 -0.1740  0.0838  0.1871  0.9641 -0.1882  0.0480 -0.2003 -0.9786    13.347   -21.579    59.982              
         T  <A  34   THR    > matches  <A 158   THR    >                        ( 30.9 A from    OG1 FLC A 701  )
         K  <A  60   LYS    > matches  <A 156   LYS    >                        ( 29.1 A from    OG1 FLC A 701  )
         E  <A 124   GLU    > matches  <A 204   GLU    >                        ( 40.3 A from    OG1 FLC A 701  )
 
KERBm  3*FOUND in 5t13  size =    3  ^    CYANURIC ACID AMIDOHYDROLASE;                           #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.6704 -0.7390  0.0673  0.7387  0.6732  0.0342  0.0705 -0.0268 -0.9972    17.616   -48.299    26.627              
         T  <A  34   THR    > matches  <A  55   THR    >                        (  5.2 A from    O2  CO2 A 402  )
         K  <A  60   LYS    > matches  <A  59   LYS    >                        (  8.4 A from    O2  CO2 A 402  )
         E  <A 124   GLU    > matches  <A  86   GLU    >                        (  6.5 A from    O2  CO2 A 401  )
 
KERBm  3*FOUND in 5uw3  size =    3  ^    PEPTIDE CYCLASE 1;                                      #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.0477  0.5484 -0.8348 -0.9989  0.0256 -0.0402  0.0007 -0.8358 -0.5490   148.889    67.474   113.791              
         T  <A  34   THR    > matches  <A 407   THR    >                        ( 20.7 A from    O2  CAC A 801  )
         K  <A  60   LYS    > matches  <A 405   LYS    >                        ( 21.0 A from    O2  CAC A 801  )
         E  <A 124   GLU    > matches  <A 442   GLU    >                        ( 35.4 A from    O2  CAC A 801  )
 
KERBm  3*FOUND in 2yjz  size =    3  ^    METALLOREDUCTASE STEAP4;                                #    1                            
  RMSD =     1.27 A
  TRANSFORM   -0.9200  0.2906  0.2629 -0.2634  0.0379 -0.9639  0.2901  0.9561 -0.0417    42.524    45.540   -24.552              
         T  <A  34   THR    > matches  <A  27   THR    >                        ( -2.6 A from    O2X NAP A1200s )
         K  <A  60   LYS    > matches  <A  32   LYS    >                        (  6.0 A from    O3B NAP A1200  )
         E  <A 124   GLU    > matches  <A  91   GLU    >                        ( 11.4 A from    N6A NAP A1200  )
 
KERBm  3*FOUND in 5ke1  size =    3  ^    OUTER MEMBRANE PROTEIN ICSA AUTOTRANSPORTER;            #    1                            
  RMSD =     1.27 A
  TRANSFORM   -0.3531 -0.2914  0.8891 -0.3883 -0.8189 -0.4226 -0.8512  0.4944 -0.1760    13.639    15.811    33.873              
         T  <A  34   THR    > matches  <A 615   THR    > 
         K  <A  60   LYS    > matches  <A 644   LYS    > 
         E  <A 124   GLU    > matches  <A 560   GLU    > 
 
KERBm  3*FOUND in 2je6  size =    3  ^    EXOSOME COMPLEX EXONUCLEASE 2;                          #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.8675 -0.1248 -0.4815  0.0600 -0.9346  0.3505  0.4937  0.3330  0.8033    26.137    -4.198   -25.053              
         T  <A  34   THR    > matches  <A 261   THR    >                        ( 16.2 A from    O4  PEG A1277  )
         K  <A  60   LYS    > matches  <A 264   LYS    >                        ( 16.6 A from    C3  PEG A1277  )
         E  <A 124   GLU    > matches  <A 109   GLU    >                        ( 15.1 A from   CL    CL B1242  )
 
KERBm  3*FOUND in 2bkm  size =    3  ^    TRUNCATED HEMOGLOBIN FROM GEOBACILLUS STEAROTHERMOP     #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.9868 -0.1105 -0.1184  0.1614  0.7307  0.6633 -0.0132  0.6737 -0.7389    25.989    -9.569    25.904              
         T  <A  34   THR    > matches  <A  17   THR    >                        ( 15.1 A from    CBC HEM A 202  )
         K  <A  60   LYS    > matches  <A  20   LYS    >                        ( 19.8 A from    O   ACT A 203  )
         E  <A 124   GLU    > matches  <A   3   GLU    >                        ( 24.1 A from    CBC HEM A 202  )
 
KERBm  3*FOUND in 5zxd  size =    3  ^    ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1;             #    2                            
  RMSD =     1.27 A
  TRANSFORM    0.3511 -0.5642  0.7472 -0.0797 -0.8131 -0.5766 -0.9329 -0.1429  0.3305    71.136    80.697    -0.488              
         T  <A  34   THR    > matches  <A  45   THR    >                        ( -2.9 A from    O2G ATP A 601s )
         K  <A  60   LYS    > matches  <A  49   LYS    >                        (  6.3 A from    N7  ATP A 601  )
         E  <A 124   GLU    > matches  <A 434   GLU    >                        ( 12.5 A from    O3' ATP A 601  )
 
KERBm  3*FOUND in 2be3  size =    3  ^    GTP PYROPHOSPHOKINASE;                                  #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.1986 -0.9056 -0.3748  0.6884  0.4011 -0.6044 -0.6976  0.1380 -0.7030    85.779   -40.206    22.356              
         T  <A  34   THR    > matches  <A  43   THR    >                        (  7.4 A from   CL    CL A 301  )
         K  <A  60   LYS    > matches  <A  20   LYS    >                        (  9.0 A from   CL    CL A 301  )
         E  <A 124   GLU    > matches  <A 154   GLU    >                        ( 15.4 A from    O2  GOL A 302  )
 
KERBm  3*FOUND in 5j7o  size =    3  ^    MAJOR CAPSID PROTEIN;                                   #    1                            
  RMSD =     1.27 A
  TRANSFORM    0.3319 -0.9317 -0.1472 -0.4075 -0.2824  0.8684  0.8507  0.2283  0.4734    49.058   -24.666   -33.410              
         T  <A  34   THR    > matches  <A 284   THR    > 
         K  <A  60   LYS    > matches  <A 286   LYS    > 
         E  <A 124   GLU    > matches  <A 519   GLU    > 
 
KERBm  3*FOUND in 1gvn  size =    3  ^    EPSILON;                                                #    2                            
  RMSD =     1.27 A
  TRANSFORM    0.9029 -0.1230  0.4118 -0.4239 -0.4134  0.8059 -0.0711  0.9022  0.4254    18.177    18.021   -11.927              
         T  <A  34   THR    > matches  <B 225   THR    >                        ( 18.5 A from    O1  SO4 B 602  )
         K  <A  60   LYS    > matches  <B 228   LYS    >                        ( 23.0 A from    O1  SO4 B 602  )
         E  <A 124   GLU    > matches  <B  56   GLU    >                        ( 18.3 A from    O1  SO4 B 602  )
 
KERBm  3*FOUND in 3ecq  size =    3  ^    ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE;                   #    2                            
  RMSD =     1.28 A
  TRANSFORM    0.5637  0.8189  0.1078  0.5345 -0.2621 -0.8035  0.6297 -0.5106  0.5855    -8.953     5.578    11.252              
         T  <A  34   THR    > matches  <A1317   THR    >                        ( 14.3 A from   CA    CA A2001  )
         K  <A  60   LYS    > matches  <A1366   LYS    >                        ( 14.7 A from   CA    CA A2001  )
         E  <A 124   GLU    > matches  <A1309   GLU    >                        ( 26.7 A from   CA    CA A2001  )
 
KERBm  3*FOUND in 1orj  size =    3  ^    FLAGELLAR PROTEIN FLIS;                                 #    1                            
  RMSD =     1.28 A
  TRANSFORM   -0.5085 -0.8516  0.1272 -0.8601  0.5092 -0.0293  0.0399  0.1243  0.9914    28.481   -22.333    29.517              
         T  <A  34   THR    > matches  <A1084   THR    > 
         K  <A  60   LYS    > matches  <A1080   LYS    > 
         E  <A 124   GLU    > matches  <A1101   GLU    > 
 
KERBm  3*FOUND in 1cjx  size =    3  ^    4-HYDROXYPHENYLPYRUVATE DIOXYGENASE;                    #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.7177 -0.2763 -0.6391  0.4449  0.8881  0.1157 -0.5356  0.3674 -0.7604    83.158   -16.920    37.037              
         T  <A  34   THR    > matches  <A 197   THR    >                        ( 15.8 A from    CH3 ACT A 631  )
         K  <A  60   LYS    > matches  <A 221   LYS    >                        ( 18.6 A from    CH3 ACT A 631  )
         E  <A 124   GLU    > matches  <A 313   GLU    >                        ( 17.4 A from   FE   FE2 A 629  )
 
KERBm  3*FOUND in 2fuk  size =    3  ^    XC6422 PROTEIN;                                         #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.0168 -0.9552  0.2954 -0.9108  0.1073  0.3986  0.4124  0.2758  0.8682    57.754     4.238    -3.297              
         T  <A  34   THR    > matches  <A 193   THR    > 
         K  <A  60   LYS    > matches  <A 200   LYS    > 
         E  <A 124   GLU    > matches  <A 179   GLU    > 
 
KERBm  3*FOUND in 1vem  size =    3  ^    BETA-AMYLASE;                                           #    2                            
  RMSD =     1.28 A
  TRANSFORM   -0.8404  0.0394 -0.5405  0.3098 -0.7834 -0.5388  0.4446  0.6203 -0.6462    60.871    19.298     4.303              
         T  <A  34   THR    > matches  <A 335   THR    >                        ( 11.8 A from    O2  GLC A 903  )
         K  <A  60   LYS    > matches  <A 337   LYS    >                        (  9.4 A from    O2  GLC A 903  )
         E  <A 124   GLU    > matches  <A 445   GLU    >                        ( 15.8 A from    C4  GLC A 906  )
 
KERBm  3*FOUND in 1ecl  size =    3  ^    ESCHERICHIA COLI TOPOISOMERASE I;                       #    2                            
  RMSD =     1.28 A
  TRANSFORM   -0.2802  0.8639 -0.4186  0.8443  0.4293  0.3207 -0.4568  0.2636  0.8496     9.255   -53.629    38.909              
         T  <A  34   THR    > matches  <A 239   THR    > 
         K  <A  60   LYS    > matches  <A 423   LYS    > 
         E  <A 124   GLU    > matches  <A 217   GLU    > 
 
KERBm  3*FOUND in 4esj  size =    3  ^    TYPE-2 RESTRICTION ENZYME DPNI;                         #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.4723  0.7204  0.5078 -0.8738  0.4585  0.1621  0.1161  0.5203 -0.8461     0.398    11.889    -1.486              
         T  <A  34   THR    > matches  <A  83   THR    >                        ( 26.6 A from   ZN    ZN A 301  )
         K  <A  60   LYS    > matches  <A  86   LYS    >                        ( 30.1 A from   ZN    ZN A 301  )
         E  <A 124   GLU    > matches  <A  25   GLU    >                        ( 11.4 A from    N3  AZI A 303  )
 
KERBm  3*FOUND in 3r4z  size =    3  ^    GLYCOSYL HYDROLASE FAMILY 32, N TERMINAL;               #    2                            
  RMSD =     1.28 A
  TRANSFORM    0.8851 -0.0844 -0.4576 -0.4077 -0.6147 -0.6752  0.2243 -0.7842  0.5785    16.450    48.909    -9.919              
         T  <A  34   THR    > matches  <A  98   THR    >                        ( 26.9 A from    O2  GLA A 375  )
         K  <A  60   LYS    > matches  <A 100   LYS    >                        ( 33.0 A from    O2  GLA A 375  )
         E  <A 124   GLU    > matches  <A  71   GLU    >                        ( 20.8 A from    O1  GLA A 375  )
 
KERBm  3*FOUND in 2po4  size =    3  ^    VIRION RNA POLYMERASE;                                  #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.9622  0.2724 -0.0040 -0.2661  0.9429  0.2004 -0.0584  0.1917 -0.9797   -48.290   -95.909    57.461              
         T  <A  34   THR    > matches  <A  72   THR    > 
         K  <A  60   LYS    > matches  <A  74   LYS    > 
         E  <A 124   GLU    > matches  <A  97   GLU    > 
 
KERBm  3*FOUND in 3vr4  size =    3  ^    V-TYPE SODIUM ATPASE CATALYTIC SUBUNIT A;               #    2                            
  RMSD =     1.28 A
  TRANSFORM    0.7947  0.1233  0.5944 -0.6065  0.2010  0.7693  0.0246  0.9718 -0.2345   -74.532   -47.004    27.693              
         T  <A  34   THR    > matches  <D 323   THR    >                        ( 24.8 A from    O3  GOL A 601  )
         K  <A  60   LYS    > matches  <D 146   LYS    >                        ( 21.8 A from    O3  GOL A 601  )
         E  <A 124   GLU    > matches  <D 308   GLU    >                        ( 33.9 A from    O1  GOL D 502  )
 
KERBm  3*FOUND in 2dx1  size =    3  ^    RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4;               #    2                            
  RMSD =     1.28 A
  TRANSFORM    0.3441 -0.0319  0.9384 -0.8283  0.4603  0.3193  0.4422  0.8872 -0.1320   -16.055   -72.068   -54.544              
         T  <A  34   THR    > matches  <A 136   THR    > 
         K  <A  60   LYS    > matches  <A 406   LYS    > 
         E  <A 124   GLU    > matches  <A 521   GLU    > 
 
KERBm  3*FOUND in 4rl9  size =    3  ^    CARBAPENEM-ASSOCIATED RESISTANCE PROTEIN;               #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.8008 -0.3700  0.4710  0.4521 -0.1425 -0.8805 -0.3929 -0.9181 -0.0532    -3.431    -3.522    34.165              
         T  <A  34   THR    > matches  <A  28   THR    > 
         K  <A  60   LYS    > matches  <A 221   LYS    > 
         E  <A 124   GLU    > matches  <A 181   GLU    > 
 
KERBm  3*FOUND in 4ge6  size =    3  ^    TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 9;       #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.8684 -0.2200  0.4443  0.4957  0.4005 -0.7706  0.0084 -0.8895 -0.4569    27.535    -4.416    35.240              
         T  <A  34   THR    > matches  <A 446   THR    >                        ( 25.0 A from    O2  B26 A 601  )
         K  <A  60   LYS    > matches  <A 444   LYS    >                        ( 24.4 A from    O1  B26 A 601  )
         E  <A 124   GLU    > matches  <A 454   GLU    >                        ( 30.7 A from    O3  B26 A 601  )
 
KERBm  3*FOUND in 4c5k  size =    3  ^    PHOSPHOMETHYLPYRIMIDINE KINASE;                         #    1                            
  RMSD =     1.28 A
  TRANSFORM   -0.0584 -0.8163  0.5747  0.8585 -0.3349 -0.3885 -0.5096 -0.4707 -0.7203    24.666   -52.548    -3.991              
         T  <A  34   THR    > matches  <A 137   THR    >                        (  8.1 A from    O2A ADP A1277  )
         K  <A  60   LYS    > matches  <A 176   LYS    >                        ( -2.7 A from    O2A ADP A1277s )
         E  <A 124   GLU    > matches  <A  95   GLU    >                        ( 15.1 A from    O3  SO4 A1278  )
 
KERBm  3*FOUND in 3tr9  size =    3  ^    DIHYDROPTEROATE SYNTHASE;                               #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.6414 -0.0121  0.7671  0.4449  0.8205 -0.3590  0.6250 -0.5715 -0.5317    17.389     2.481    30.636              
         T  <A  34   THR    > matches  <A  54   THR    >                        ( 11.7 A from   CL    CL A 315  )
         K  <A  60   LYS    > matches  <A  57   LYS    >                        ( 13.0 A from   CL    CL A 315  )
         E  <A 124   GLU    > matches  <A  71   GLU    >                        (  5.6 A from   NA    NA A 316  )
 
KERBm  3*FOUND in 2zj8  size =    3  ^    PUTATIVE SKI2-TYPE HELICASE;                            #    2                            
  RMSD =     1.28 A
  TRANSFORM    0.5444  0.7999  0.2525 -0.1200 -0.2236  0.9673 -0.8302  0.5569  0.0258     2.561   -16.838    37.439              
         T  <A  34   THR    > matches  <A 285   THR    > 
         K  <A  60   LYS    > matches  <A 288   LYS    > 
         E  <A 124   GLU    > matches  <A 605   GLU    > 
 
KERBm  3*FOUND in 5znm  size =    3  ^    COLICIN-D;                                              #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.0138  0.9293  0.3692 -0.9729  0.0978 -0.2097  0.2310  0.3562 -0.9054    24.920    22.447    12.868              
         T  <A  34   THR    > matches  <A 518   THR    >                        (  4.9 A from    O1  GOL A 711  )
         K  <A  60   LYS    > matches  <A 505   LYS    >                        (  3.3 A from    O1  GOL A 711s )
         E  <A 124   GLU    > matches  <A 635   GLU    >                        ( 11.6 A from    O1  GOL A 704  )
 
KERBm  3*FOUND in 4g68  size =    3  ^    ABC TRANSPORTER;                                        #    2                            
  RMSD =     1.28 A
  TRANSFORM    0.3587  0.1429  0.9225  0.2916  0.9216 -0.2561  0.8867 -0.3609 -0.2889   -16.360    33.448    29.985              
         T  <A  34   THR    > matches  <B 170   THR    >                        ( 30.3 A from    O4B XYP B 802  )
         K  <A  60   LYS    > matches  <B 174   LYS    >                        ( 33.7 A from    O5B XYP B 801  )
         E  <A 124   GLU    > matches  <B 292   GLU    >                        ( 29.8 A from    O4B XYP B 802  )
 
KERBm  3*FOUND in 5d0o  size =    3  ^    OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA;            #    2                            
  RMSD =     1.28 A
  TRANSFORM    0.6202 -0.7761  0.1142  0.7685  0.6303  0.1102  0.1575 -0.0195 -0.9873   -14.261   -76.495    20.455              
         T  <A  34   THR    > matches  <A 612   THR    > 
         K  <A  60   LYS    > matches  <A 610   LYS    > 
         E  <A 124   GLU    > matches  <A 717   GLU    > 
 
KERBm  3*FOUND in 6f9t  size =    3  ^    ANGIOTENSIN-CONVERTING ENZYME;                          #    1                            
  RMSD =     1.28 A
  TRANSFORM   -0.2066  0.6617  0.7207 -0.9409 -0.3364  0.0391 -0.2683  0.6700 -0.6921    11.939    -7.642    12.174              
         T  <A  34   THR    > matches  <A  97   THR    >                        (  9.4 A from    H21 EDO A 719  )
         K  <A  60   LYS    > matches  <A 101   LYS    >                        ( 11.9 A from    H21 EDO A 719  )
         E  <A 124   GLU    > matches  <A  61   GLU    >                        ( 13.7 A from    H11 EDO A 720  )
 
KERBm  3*FOUND in 2nxo  size =    3  ^    HYPOTHETICAL PROTEIN SCO4506;                           #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.3862 -0.4171 -0.8227  0.3183 -0.7769  0.5433  0.8658  0.4717  0.1673     9.727   -16.523   -54.903              
         T  <A  34   THR    > matches  <A 244   THR    > 
         K  <A  60   LYS    > matches  <A 240   LYS    > 
         E  <A 124   GLU    > matches  <A 255   GLU    > 
 
KERBm  3*FOUND in 3b8o  size =    3  ^    LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN WZZE;           #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.4826 -0.3707  0.7935 -0.6613  0.4397  0.6077  0.5742  0.8180  0.0329   -37.389    -3.850   -35.726              
         T  <A  34   THR    > matches  <A 122   THR    > 
         K  <A  60   LYS    > matches  <A 126   LYS    > 
         E  <A 124   GLU    > matches  <A 313   GLU    > 
 
KERBm  3*FOUND in 2ip6  size =    3  ^    PAPB;                                                   #    1                            
  RMSD =     1.28 A
  TRANSFORM   -0.4466  0.8629  0.2368  0.0216  0.2749 -0.9612  0.8945  0.4241  0.1414    79.507   -16.400   -19.346              
         T  <A  34   THR    > matches  <A  42   THR    >                        ( 17.3 A from    O1  SO4 A 113  )
         K  <A  60   LYS    > matches  <A  46   LYS    >                        ( 15.7 A from    O1  SO4 A 113  )
         E  <A 124   GLU    > matches  <A  31   GLU    >                        ( 35.1 A from    O3  SO4 A 113  )
 
KERBm  3*FOUND in 1f1s  size =    3  ^    HYALURONATE LYASE;                                      #    3                            
  RMSD =     1.28 A
  TRANSFORM    0.3034 -0.2562  0.9178  0.8658  0.4764 -0.1532  0.3980 -0.8410 -0.3664     7.983    -8.780    20.412              
         T  <A  34   THR    > matches  <A 586   THR    > 
         K  <A  60   LYS    > matches  <A 589   LYS    > 
         E  <A 124   GLU    > matches  <A 572   GLU    > 
 
KERBm  3*FOUND in 1yqg  size =    3  ^    PYRROLINE-5-CARBOXYLATE REDUCTASE;                      #    2                            
  RMSD =     1.28 A
  TRANSFORM    0.1000 -0.8011  0.5902 -0.7606 -0.4439 -0.4737 -0.6414  0.4015  0.6537    37.129    38.022    12.540              
         T  <A  34   THR    > matches  <A 148   THR    >                        ( 26.8 A from    O1  SO4 A 301  )
         K  <A  60   LYS    > matches  <A 143   LYS    >                        ( 29.8 A from    O1  SO4 A 301  )
         E  <A 124   GLU    > matches  <A 259   GLU    >                        ( 23.3 A from    O1  SO4 A 301  )
 
KERBm  3*FOUND in 5hvn  size =    3  ^    3-DEHYDROQUINATE SYNTHASE;                              #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.0606  0.7019  0.7097  0.5543  0.5676 -0.6087  0.8301 -0.4303  0.3547    77.044    49.701    51.784              
         T  <A  34   THR    > matches  <A  44   THR    >                        ( -3.7 A from    O2B NAD A 401s )
         K  <A  60   LYS    > matches  <A  47   LYS    >                        (  8.3 A from    C2A NAD A 401  )
         E  <A 124   GLU    > matches  <A 254   GLU    >                        (  7.0 A from    C3D NAD A 401  )
 
KERBm  3*FOUND in 5the  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.1202  0.2520 -0.9602  0.9448 -0.3259  0.0327  0.3047  0.9112  0.2773   287.516    74.875  -106.854              
         T  <A  34   THR    > matches  <A1090   THR    > 
         K  <A  60   LYS    > matches  <A1092   LYS    > 
         E  <A 124   GLU    > matches  <A1162   GLU    > 
 
KERBm  3*FOUND in 1qwd  size =    3  ^    OUTER MEMBRANE LIPOPROTEIN BLC;                         #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.1618 -0.2958 -0.9414 -0.9637 -0.2527 -0.0862  0.2124 -0.9212  0.3260    69.460     6.992    33.612              
         T  <A  34   THR    > matches  <A  63   THR    > 
         K  <A  60   LYS    > matches  <A  77   LYS    > 
         E  <A 124   GLU    > matches  <A 124   GLU    > 
 
KERBm  3*FOUND in 1gax  size =    3  ^    TRNA(VAL);                                              #    1                            
  RMSD =     1.28 A
  TRANSFORM    0.9191 -0.2616  0.2945  0.3695  0.3134 -0.8748 -0.1366 -0.9129 -0.3847   -69.610    -2.127    86.360              
         T  <A  34   THR    > matches  <A 214   THR    >                        ( 24.2 A from   ZN    ZN A 998  )
         K  <A  60   LYS    > matches  <A 270   LYS    >                        ( 26.4 A from   ZN    ZN A 998  )
         E  <A 124   GLU    > matches  <A 191   GLU    >                        ( 12.2 A from   ZN    ZN A 998  )
 
KERBm  3*FOUND in 2van  size =    3  ^    DNA POLYMERSE BETA;                                     #    1                            
  RMSD =     1.29 A
  TRANSFORM    0.6427  0.3292 -0.6918 -0.5506  0.8263 -0.1183 -0.5328 -0.4570 -0.7123     7.994     9.133    61.056              
         T  <A  34   THR    > matches  <A 227   THR    > 
         K  <A  60   LYS    > matches  <A 230   LYS    > 
         E  <A 124   GLU    > matches  <A 144   GLU    > 
 
KERBm  3*FOUND in 6epg  size =    3  ^    EPSILON_1 ANTITOXIN;                                    #    2                            
  RMSD =     1.29 A
  TRANSFORM   -0.8016 -0.5692  0.1830  0.2221 -0.5677 -0.7927 -0.5551  0.5948 -0.5815    94.530    16.949     4.275              
         T  <A  34   THR    > matches  <B 295   THR    >                        ( 23.5 A from    O4  SO4 B 504  )
         K  <A  60   LYS    > matches  <B 307   LYS    >                        ( 28.2 A from    O4  SO4 B 504  )
         E  <A 124   GLU    > matches  <B 392   GLU    >                        ( -5.2 A from    O2  SO4 B 504s )
 
KERBm  3*FOUND in 2zzr  size =    3  ^    UNSATURATED GLUCURONYL HYDROLASE;                       #    1                            
  RMSD =     1.29 A
  TRANSFORM   -0.5068  0.4834  0.7138 -0.8300 -0.0499 -0.5555  0.2329  0.8740 -0.4265    95.473    19.354   -27.574              
         T  <A  34   THR    > matches  <A 338   THR    >                        (  8.4 A from    O2  SO4 A 403  )
         K  <A  60   LYS    > matches  <A 287   LYS    >                        ( -2.9 A from    O2  SO4 A 403s )
         E  <A 124   GLU    > matches  <A 324   GLU    >                        ( 11.4 A from    O1  GOL A 406  )
 
KERBm  3*FOUND in 2j69  size =    3  ^    BACTERIAL DYNAMIN-LIKE PROTEIN;                         #    1                            
  RMSD =     1.29 A
  TRANSFORM   -0.6015 -0.7935 -0.0921 -0.0677 -0.0642  0.9956  0.7960 -0.6051  0.0151    78.968    26.919    -5.153              
         T  <A  34   THR    > matches  <A 497   THR    > 
         K  <A  60   LYS    > matches  <A 499   LYS    > 
         E  <A 124   GLU    > matches  <A  39   GLU    > 
 
KERBm  3*FOUND in 3ucp  size =    3  ^    UNDA;                                                   #    1                            
  RMSD =     1.29 A
  TRANSFORM   -0.6867 -0.7039  0.1816 -0.7113  0.5990 -0.3678 -0.1501  0.3817  0.9120    55.456    10.418   -42.279              
         T  <A  34   THR    > matches  <A 101   THR    >                        ( 12.0 A from    O2A HEC A 903  )
         K  <A  60   LYS    > matches  <A  99   LYS    >                        ( 17.2 A from    O2A HEC A 903  )
         E  <A 124   GLU    > matches  <A 450   GLU    >                        (  9.8 A from    O1A HEC A 905  )
 
KERBm  3*FOUND in 2owl  size =    3  ^    RECOMBINATION-ASSOCIATED PROTEIN RDGC;                  #    1                            
  RMSD =     1.29 A
  TRANSFORM    0.5237  0.1876 -0.8310  0.4666 -0.8793  0.0955  0.7128  0.4378  0.5480    51.453   -36.670    21.312              
         T  <A  34   THR    > matches  <A 150   THR    >                        ( 39.6 A from   CA    CA A 304  )
         K  <A  60   LYS    > matches  <A 146   LYS    >                        ( 39.5 A from   CA    CA A 304  )
         E  <A 124   GLU    > matches  <A  22   GLU    >                        ( 55.9 A from   CA    CA A 304  )
 
KERBm  3*FOUND in 6a5k  size =    3  ^    HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPE     #    2                            
  RMSD =     1.29 A
  TRANSFORM   -0.0970  0.6670 -0.7388  0.8368 -0.3472 -0.4233  0.5388  0.6593  0.5245    43.213    -3.277   -66.533              
         T  <A  34   THR    > matches  <A 536   THR    >                        ( 15.5 A from    CE  SAM A 805  )
         K  <A  60   LYS    > matches  <A 514   LYS    >                        ( 17.2 A from    O   SAM A 805  )
         E  <A 124   GLU    > matches  <A 651   GLU    >                        ( 22.8 A from    CE  SAM A 805  )
 
KERBm  3*FOUND in 3bg1  size =    3  ^    PROTEIN SEC13 HOMOLOG;                                  #    2                            
  RMSD =     1.29 A
  TRANSFORM    0.1471 -0.8012 -0.5800 -0.8634  0.1821 -0.4705 -0.4826 -0.5700  0.6650   185.427   100.490    40.949              
         T  <A  34   THR    > matches  <B 469   THR    > 
         K  <A  60   LYS    > matches  <B 436   LYS    > 
         E  <A 124   GLU    > matches  <B 212   GLU    > 
 
KERBm  3*FOUND in 3nzj  size =    3  ^    PROTEASOME COMPONENT Y7;                                #    2                            
  RMSD =     1.29 A
  TRANSFORM    0.0912  0.3911 -0.9158  0.8548 -0.5026 -0.1295  0.5109  0.7710  0.3802   119.736  -115.202    73.070              
         T  <A  34   THR    > matches  <H 119   THR    >                        ( 58.1 A from    C2  MES K 212  )
         K  <A  60   LYS    > matches  <H  84   LYS    >                        ( 57.0 A from    C2  MES K 212  )
         E  <A 124   GLU    > matches  <H 139   GLU    >                        ( 67.5 A from    C2  MES K 212  )
 
KERBm  3*FOUND in 4dlq  size =    3  ^    LATROPHILIN-1;                                          #    1                            
  RMSD =     1.29 A
  TRANSFORM    0.6972  0.6266 -0.3481 -0.6901  0.4555 -0.5624  0.1939 -0.6324 -0.7500   -29.276    22.832    13.323              
         T  <A  34   THR    > matches  <A 743   THR    >                        ( -2.9 A from    O1  SO4 A 913s )
         K  <A  60   LYS    > matches  <A 745   LYS    >                        ( -5.3 A from    O1  SO4 A 913s )
         E  <A 124   GLU    > matches  <A 808   GLU    >                        ( -5.5 A from    O2  SO4 A 909s )
 
KERBm  3*FOUND in 4pvk  size =    3  ^    POLLEN ALLERGEN PHL P 4.0202;                           #    1                            
  RMSD =     1.29 A
  TRANSFORM   -0.5511 -0.6798  0.4839  0.6706 -0.7059 -0.2279 -0.4965 -0.1989 -0.8449    10.403   -66.373     5.346              
         T  <A  34   THR    > matches  <A 272   THR    >                        ( 16.4 A from    O4  FAD A 601  )
         K  <A  60   LYS    > matches  <A 270   LYS    >                        ( 19.1 A from   HM71 FAD A 601  )
         E  <A 124   GLU    > matches  <A 304   GLU    >                        ( 24.6 A from    O4  FAD A 601  )
 
KERBm  3*FOUND in 5mtv  size =    3  ^    EH DOMAIN-CONTAINING PROTEIN 4;                         #    1                            
  RMSD =     1.29 A
  TRANSFORM    0.4086 -0.4507 -0.7937 -0.6795  0.4303 -0.5942 -0.6093 -0.7821  0.1304   113.628    -8.455   171.018              
         T  <A  34   THR    > matches  <A  72   THR    >                        ( -5.2 A from    O1B AGS A1000s )
         K  <A  60   LYS    > matches  <A 223   LYS    >                        ( -3.3 A from    O4' AGS A1000s )
         E  <A 124   GLU    > matches  <A 205   GLU    >                        ( 19.0 A from    H21 AGS A1000  )
 
KERBm  3*FOUND in 4bby  size =    3  ^    ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMA     #    1                            
  RMSD =     1.29 A
  TRANSFORM    0.3036 -0.6619  0.6853 -0.7599  0.2657  0.5933  0.5748  0.7009  0.4223    13.104   -10.704   -68.371              
         T  <A  34   THR    > matches  <A 370   THR    >                        (  7.4 A from    O3B FAD A 999  )
         K  <A  60   LYS    > matches  <A 643   LYS    >                        ( 10.7 A from    O2B FAD A 999  )
         E  <A 124   GLU    > matches  <A 529   GLU    >                        (  7.4 A from    N1  FAD A 999  )
 
KERBm  3*FOUND in 4q2t  size =    3  ^    ARGININE--TRNA LIGASE, CYTOPLASMIC;                     #    2                            
  RMSD =     1.29 A
  TRANSFORM   -0.6878  0.3229  0.6501  0.0442 -0.8753  0.4816 -0.7245 -0.3600 -0.5878   -99.162   -61.733   251.954              
         T  <A  34   THR    > matches  <A 387   THR    >                        (  9.6 A from    HO3 GOL A 602  )
         K  <A  60   LYS    > matches  <A 381   LYS    >                        ( 11.7 A from    HO3 GOL A 602  )
         E  <A 124   GLU    > matches  <A 260   GLU    >                        ( 11.9 A from    N   ARG A 601  )
 
KERBm  3*FOUND in 4wbd  size =    3  ^    BSHC;                                                   #    1                            
  RMSD =     1.29 A
  TRANSFORM    0.6796 -0.0130 -0.7335  0.5319 -0.6798  0.5049  0.5052  0.7333  0.4551    53.536   -14.586    -3.415              
         T  <A  34   THR    > matches  <A 242   THR    >                        ( 21.2 A from    C3  GOL A 603  )
         K  <A  60   LYS    > matches  <A 239   LYS    >                        ( 24.9 A from    C3  GOL A 603  )
         E  <A 124   GLU    > matches  <A 254   GLU    >                        ( 24.8 A from    O3  GOL A 603  )
 
KERBm  3*FOUND in 1rld  size =    3  ^    RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (LA     #    2                            
  RMSD =     1.29 A
  TRANSFORM    0.2427 -0.9470 -0.2105 -0.9698 -0.2418 -0.0304  0.0221 -0.2116  0.9771   -19.227     8.089    34.075              
         T  <A  34   THR    > matches  <A 330   THR    > 
         K  <A  60   LYS    > matches  <A 334   LYS    > 
         E  <A 124   GLU    > matches  <A 158   GLU    > 
 
KERBm  3*FOUND in 5xm3  size =    3  ^    GLUCOSE DEHYDROGENASE;                                  #    1                            
  RMSD =     1.29 A
  TRANSFORM    0.7111 -0.4147 -0.5678  0.1708  0.8852 -0.4327 -0.6821 -0.2107 -0.7003    25.274    -4.309    30.904              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( 18.4 A from    O9A PQQ A 701  )
         K  <A  60   LYS    > matches  <A 157   LYS    >                        ( 17.2 A from    O9B PQQ A 701  )
         E  <A 124   GLU    > matches  <A 113   GLU    >                        ( 34.6 A from    O2B PQQ A 701  )
 
KERBm  3*FOUND in 3iox  size =    3  ^    AGI/II;                                                 #    1                            
  RMSD =     1.29 A
  TRANSFORM   -0.9321 -0.2463 -0.2654  0.0200  0.6970 -0.7168 -0.3615  0.6735  0.6447    48.563   -13.206    -9.101              
         T  <A  34   THR    > matches  <A 631   THR    >                        ( 20.6 A from   CA    CA A 903  )
         K  <A  60   LYS    > matches  <A 629   LYS    >                        ( 24.7 A from   CA    CA A 903  )
         E  <A 124   GLU    > matches  <A 665   GLU    >                        ( 18.8 A from   CA    CA A 903  )
 
KERBm  3*FOUND in 5u7n  size =    3  ^    CYTOCHROME C OXIDASE SUBUNIT 2;                         #    1                            
  RMSD =     1.29 A
  TRANSFORM   -0.2213  0.7206 -0.6571  0.8662  0.4548  0.2070 -0.4480  0.5234  0.7248    53.825  -116.160    36.645              
         T  <A  34   THR    > matches  <A 138   THR    >                        ( 25.8 A from   CU    CU A1000  )
         K  <A  60   LYS    > matches  <A 140   LYS    >                        ( 29.1 A from   CU    CU A1000  )
         E  <A 124   GLU    > matches  <A  51   GLU    >                        ( 20.6 A from   CU    CU A1000  )
 
KERBm  3*FOUND in 4lxr  size =    3  ^    PROTEIN TOLL;                                           #    1                            
  RMSD =     1.29 A
  TRANSFORM   -0.5099 -0.6564 -0.5560  0.1603 -0.7075  0.6883  0.8452 -0.2618 -0.4660    -9.340   -12.395    83.659              
         T  <A  34   THR    > matches  <A 128   THR    >                        ( 25.4 A from    C8  NAG A2013  )
         K  <A  60   LYS    > matches  <A 153   LYS    >                        ( 23.4 A from    C8  NAG A2013  )
         E  <A 124   GLU    > matches  <A  51   GLU    >                        ( 17.4 A from    O7  NAG A2006  )
 
KERBm  3*FOUND in 3eag  size =    3  ^    UDP-N-ACETYLMURAMATE:L-ALANYL-GAMMA-D-GLUTAMYL-MESO     #    1                            
  RMSD =     1.29 A
  TRANSFORM    0.8909 -0.4388  0.1174  0.3636  0.8438  0.3948  0.2723  0.3090 -0.9112    34.302   -66.646    65.835              
         T  <A  34   THR    > matches  <A 240   THR    >                        ( 27.8 A from    O3  GOL A 401  )
         K  <A  60   LYS    > matches  <A 243   LYS    >                        ( 28.3 A from    O3  GOL A 401  )
         E  <A 124   GLU    > matches  <A 169   GLU    >                        ( 24.1 A from    O3  GOL A 401  )
 
KERBm  3*FOUND in 1g8k  size =    3  ^    ARSENITE OXIDASE;                                       #    2                            
  RMSD =     1.29 A
  TRANSFORM    0.0921  0.8592 -0.5033  0.4431 -0.4880 -0.7520  0.8917  0.1538  0.4256    20.499   -38.686   -31.695              
         T  <A  34   THR    > matches  <A 113   THR    >                        ( 19.9 A from    O2' MGD A5001  )
         K  <A  60   LYS    > matches  <A 117   LYS    >                        ( 18.1 A from    O2' MGD A5001  )
         E  <A 124   GLU    > matches  <A  40   GLU    >                        ( 26.2 A from    S2  FES B5006  )
 
KERBm  3*FOUND in 5ukl  size =    3  ^    BETA-ADRENERGIC RECEPTOR KINASE 1;                      #    1                            
  RMSD =     1.30 A
  TRANSFORM    0.9249 -0.3800 -0.0094  0.1622  0.4169 -0.8944 -0.3438 -0.8257 -0.4473    20.615    17.461    69.101              
         T  <A  34   THR    > matches  <A 524   THR    >                        ( 18.8 A from    C23 SIX A 702  )
         K  <A  60   LYS    > matches  <A 215   LYS    >                        ( 12.8 A from    C23 SIX A 702  )
         E  <A 124   GLU    > matches  <A 537   GLU    >                        ( 37.0 A from    C23 SIX A 702  )
 
KERBm  3*FOUND in 3iab  size =    3  ^    RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP6;               #    2                            
  RMSD =     1.30 A
  TRANSFORM    0.9100  0.1455 -0.3882  0.1167 -0.9884 -0.0968  0.3978 -0.0428  0.9165    33.082    42.989   -42.087              
         T  <A  34   THR    > matches  <A 116   THR    >                        ( 35.4 A from   ZN    ZN B 143  )
         K  <A  60   LYS    > matches  <A 114   LYS    >                        ( 34.2 A from   ZN    ZN B 143  )
         E  <A 124   GLU    > matches  <A 130   GLU    >                        ( 39.7 A from   ZN    ZN B 142  )
 
KERBm  3*FOUND in 1h0h  size =    3  ^    FORMATE DEHYDROGENASE SUBUNIT ALPHA;                    #    1                            
  RMSD =     1.30 A
  TRANSFORM   -0.7661 -0.0744  0.6384  0.5076 -0.6794  0.5299 -0.3943 -0.7300 -0.5583     1.208   -41.027    43.148              
         T  <A  34   THR    > matches  <B  12   THR    >                        ( -4.3 A from    S2  SF4 B1011s )
         K  <A  60   LYS    > matches  <A 229   LYS    >                        (  7.9 A from    S2  SF4 B1011  )
         E  <A 124   GLU    > matches  <A  41   GLU    >                        ( 10.1 A from    S4  SF4 B1012  )
 
KERBm  3*FOUND in 2a74  size =    3  ^    COMPLEMENT COMPONENT C3C;                               #    2                            
  RMSD =     1.30 A
  TRANSFORM    0.1955 -0.8682 -0.4560 -0.4639  0.3278 -0.8230 -0.8640 -0.3724  0.3387    62.052    77.769    30.031              
         T  <A  34   THR    > matches  <A 115   THR    >                        ( 18.8 A from    C1  GOL A 703  )
         K  <A  60   LYS    > matches  <A 588   LYS    >                        ( 14.1 A from    O2  GOL A 713  )
         E  <A 124   GLU    > matches  <C1464   GLU    >                        (  9.9 A from    C3  GOL A 703  )
 
KERBm  3*FOUND in 2e2r  size =    3  ^    ESTROGEN-RELATED RECEPTOR GAMMA;                        #    3                            
  RMSD =     1.30 A
  TRANSFORM   -0.3310  0.5847  0.7407  0.1003 -0.7586  0.6437 -0.9383 -0.2874 -0.1924    45.621     9.595     7.249              
         T  <A  34   THR    > matches  <A 427   THR    >                        (  7.6 A from    O1  2OH A1401  )
         K  <A  60   LYS    > matches  <A 430   LYS    >                        (  9.8 A from    O1  2OH A1401  )
         E  <A 124   GLU    > matches  <A 365   GLU    >                        ( 20.9 A from    O2  2OH A1401  )
 
KERBm  3*FOUND in 5xb6  size =    3  ^    UNCHARACTERIZED PROTEIN YCJY;                           #    2                            
  RMSD =     1.30 A
  TRANSFORM   -0.0382 -0.9733  0.2264  0.4912  0.1790  0.8524  0.8702 -0.1437 -0.4713    16.511    -4.447    47.964              
         T  <A  34   THR    > matches  <A  53   THR    > 
         K  <A  60   LYS    > matches  <A  56   LYS    > 
         E  <A 124   GLU    > matches  <A 198   GLU    > 
 
KERBm  3*FOUND in 4nl4  size =    3  ^    PRIMOSOME ASSEMBLY PROTEIN PRIA;                        #    1                            
  RMSD =     1.30 A
  TRANSFORM    0.6179  0.2191 -0.7551 -0.0004 -0.9603 -0.2790  0.7862 -0.1727  0.5933    31.619   -16.471    14.399              
         T  <A  34   THR    > matches  <H 607   THR    >                        ( 23.4 A from    O2B ADP H 801  )
         K  <A  60   LYS    > matches  <H 611   LYS    >                        ( 24.8 A from    O2B ADP H 801  )
         E  <A 124   GLU    > matches  <H 443   GLU    >                        ( 10.4 A from   ZN    ZN H 802  )
 
KERBm  3*FOUND in 5p9v  size =    3  ^    CATECHOL O-METHYLTRANSFERASE;                           #    1                            
  RMSD =     1.30 A
  TRANSFORM   -0.3989 -0.5363 -0.7438  0.6113  0.4491 -0.6516 -0.6835  0.7146 -0.1488    52.886    19.212    32.031              
         T  <A  34   THR    > matches  <A 134   THR    >                        ( 13.9 A from    C6  CXS A 307  )
         K  <A  60   LYS    > matches  <A 127   LYS    >                        ( 13.2 A from    O1  CXS A 307  )
         E  <A 124   GLU    > matches  <A  56   GLU    >                        ( 20.6 A from    OXT SAH A 304  )
 
KERBm  3*FOUND in 5ean  size =    3  ^    DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA     #    1                            
  RMSD =     1.30 A
  TRANSFORM   -0.0717  0.2683 -0.9607  0.8694  0.4888  0.0716 -0.4888  0.8301  0.2683    32.617   -51.422   -17.222              
         T  <A  34   THR    > matches  <A 656   THR    >                        ( -3.6 A from    O1A ADP A1103s )
         K  <A  60   LYS    > matches  <A 689   LYS    >                        ( -3.2 A from    O3A ADP A1103s )
         E  <A 124   GLU    > matches  <A 815   GLU    >                        ( 19.8 A from    O2A ADP A1103  )
 
KERBm  3*FOUND in 5y72  size =    3  ^    AMBP3;                                                  #    1                            
  RMSD =     1.30 A
  TRANSFORM   -0.4197  0.0322  0.9071 -0.4979  0.8274 -0.2598  0.7589  0.5607  0.3312   -15.742   -18.813    -4.079              
         T  <A  34   THR    > matches  <A 157   THR    >                        (  3.9 A from    S9  DST A 401  )
         K  <A  60   LYS    > matches  <A 115   LYS    >                        ( -2.7 A from    O6  DST A 401s )
         E  <A 124   GLU    > matches  <A 126   GLU    >                        ( 19.4 A from    C14 DST A 401  )
 
KERBm  3*FOUND in 3l8d  size =    3  ^    METHYLTRANSFERASE;                                      #    1                            
  RMSD =     1.30 A
  TRANSFORM   -0.8002 -0.5997 -0.0026 -0.5967  0.7967 -0.0963 -0.0598  0.0755  0.9954    76.965     2.130   -20.038              
         T  <A  34   THR    > matches  <A  74   THR    >                        ( 35.3 A from    K     K A 243  )
         K  <A  60   LYS    > matches  <A  53   LYS    >                        ( 37.8 A from    K     K A 243  )
         E  <A 124   GLU    > matches  <A  33   GLU    >                        ( 28.9 A from    K     K A 243  )
 
KERBm  3*FOUND in 5xf7  size =    3  ^    PROTEIN DISULFIDE-ISOMERASE-LIKE PROTEIN OF THE TES     #    2                            
  RMSD =     1.30 A
  TRANSFORM   -0.3499  0.2134  0.9122  0.7981  0.5778  0.1709  0.4906 -0.7878  0.3724    27.239   -44.012    22.799              
         T  <A  34   THR    > matches  <A 263   THR    > 
         K  <A  60   LYS    > matches  <A 266   LYS    > 
         E  <A 124   GLU    > matches  <A  80   GLU    > 
 
KERBm  3*FOUND in 2wzk  size =    3  ^    CULLIN-5;                                               #    1                            
  RMSD =     1.30 A
  TRANSFORM   -0.7448  0.4730  0.4707 -0.1759  0.5412 -0.8223  0.6437  0.6952  0.3198   -74.341   117.686   -44.570              
         T  <A  34   THR    > matches  <A 271   THR    >                        ( 22.7 A from    O2  EDO A1391  )
         K  <A  60   LYS    > matches  <A 274   LYS    >                        ( 20.6 A from    O1  EDO A1392  )
         E  <A 124   GLU    > matches  <A 203   GLU    >                        (  5.3 A from    O2  EDO A1391  )
 
KERBm  3*FOUND in 2yi9  size =    3  ^    RNA-DIRECTED RNA POLYMERASE;                            #    1                            
  RMSD =     1.30 A
  TRANSFORM    0.2844  0.8741 -0.3937 -0.3298  0.4748  0.8160 -0.9002  0.1022 -0.4234    27.307    14.738    53.893              
         T  <A  34   THR    > matches  <A 527   THR    >                        ( 18.3 A from   MG    MG A1793  )
         K  <A  60   LYS    > matches  <A 554   LYS    >                        ( 19.1 A from   MG    MG A1793  )
         E  <A 124   GLU    > matches  <A 380   GLU    >                        ( 23.9 A from   MG    MG A1793  )
 
KERBm  3*FOUND in 5crk  size =    3  ^    TRANSCRIPTION TERMINATION FACTOR 1, MITOCHONDRIAL;      #    1                            
  RMSD =     1.30 A
  TRANSFORM   -0.1724  0.8574 -0.4848  0.8125  0.4020  0.4222 -0.5569  0.3212  0.7660    23.361    34.430    20.072              
         T  <A  34   THR    > matches  <O 249   THR    > 
         K  <A  60   LYS    > matches  <O 253   LYS    > 
         E  <A 124   GLU    > matches  <O 165   GLU    > 
 
KERBm  3*FOUND in 3v5w  size =    3  ^    G-PROTEIN COUPLED RECEPTOR KINASE 2;                    #    1                            
  RMSD =     1.30 A
  TRANSFORM    0.9412 -0.3368  0.0251  0.1847  0.4512 -0.8731 -0.2828 -0.8264 -0.4869    12.586    21.242    58.930              
         T  <A  34   THR    > matches  <A 524   THR    >                        ( 18.7 A from    CAL 8PR A 701  )
         K  <A  60   LYS    > matches  <A 215   LYS    >                        ( 12.2 A from    CAL 8PR A 701  )
         E  <A 124   GLU    > matches  <A 537   GLU    >                        ( 36.8 A from    CAL 8PR A 701  )
 
KERBm  3*FOUND in 4a6q  size =    3  ^    HISTONE DEACETYLASE COMPLEX SUBUNIT SAP18;              #    1                            
  RMSD =     1.30 A
  TRANSFORM   -0.7656 -0.6014 -0.2285 -0.3328  0.0664  0.9406  0.5506 -0.7962  0.2510   101.519   -20.616    82.129              
         T  <A  34   THR    > matches  <A  70   THR    >                        ( 12.1 A from    C1  IPA A1144  )
         K  <A  60   LYS    > matches  <A  67   LYS    >                        ( 16.2 A from    C1  IPA A1144  )
         E  <A 124   GLU    > matches  <A  45   GLU    >                        ( 10.2 A from    O2  IPA A1144  )
 
KERBm  3*FOUND in 5m45  size =    3  ^    ACETONE CARBOXYLASE ALPHA SUBUNIT;                      #    2                            
  RMSD =     1.30 A
  TRANSFORM   -0.7605 -0.6440  0.0834 -0.6466  0.7628 -0.0060  0.0598  0.0585  0.9965   -49.546    42.817   -30.424              
         T  <A  34   THR    > matches  <A  38   THR    >                        (  9.7 A from    C6  AE4 A 804  )
         K  <A  60   LYS    > matches  <A  45   LYS    >                        ( 14.9 A from    C6  AE4 A 804  )
         E  <A 124   GLU    > matches  <A 124   GLU    >                        ( 10.3 A from    C9  AE4 A 804  )
 
KERBm  3*FOUND in 1nuw  size =    3  ^    FRUCTOSE-1,6-BISPHOSPHATASE;                            #    2                            
  RMSD =     1.30 A
  TRANSFORM    0.0041 -0.6423  0.7664  0.9172  0.3078  0.2531  0.3985 -0.7019 -0.5903    28.400   -23.561    32.064              
         T  <A  34   THR    > matches  <A1039   THR    >                        ( 19.9 A from   MG    MG A2497  )
         K  <A  60   LYS    > matches  <A1042   LYS    >                        ( 22.1 A from   MG    MG A2497  )
         E  <A 124   GLU    > matches  <A1108   GLU    >                        ( 28.4 A from   MG    MG A2499  )
 
KERBm  3*FOUND in 5htx  size =    3  ^    PUTATIVE XYLULOSE KINASE;                               #    2                            
  RMSD =     1.31 A
  TRANSFORM   -0.9333  0.3454  0.0987 -0.0395  0.1744 -0.9839  0.3570  0.9221  0.1491   -23.172   159.933     9.823              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 18.0 A from    O1B ADP A 501  )
         K  <A  60   LYS    > matches  <A 136   LYS    >                        ( 19.5 A from    O3B ADP A 501  )
         E  <A 124   GLU    > matches  <A 333   GLU    >                        ( 14.7 A from    O1B ADP A 501  )
 
KERBm  3*FOUND in 1p4p  size =    3  ^    OUTER SURFACE PROTEIN B;                                #    3                            
  RMSD =     1.31 A
  TRANSFORM   -0.3232 -0.3628  0.8740 -0.7596 -0.4514 -0.4682 -0.5644  0.8152  0.1296   -34.040    31.446     9.845              
         T  <A  34   THR    > matches  <A 247   THR    > 
         K  <A  60   LYS    > matches  <A 254   LYS    > 
         E  <A 124   GLU    > matches  <A 184   GLU    > 
 
KERBm  3*FOUND in 2og9  size =    3  ^    MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME;         #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.7542 -0.0431  0.6553 -0.6552  0.0176  0.7552  0.0441  0.9989  0.0149   -12.289     2.737   -30.821              
         T  <A  34   THR    > matches  <A 296   THR    >                        ( 31.5 A from   CA    CA A 401  )
         K  <A  60   LYS    > matches  <A 300   LYS    >                        ( 30.0 A from   CA    CA A 401  )
         E  <A 124   GLU    > matches  <A  53   GLU    >                        ( 45.3 A from   CA    CA A 401  )
 
KERBm  3*FOUND in 4knh  size =    3  ^    NUP192P;                                                #    2                            
  RMSD =     1.31 A
  TRANSFORM    0.2738 -0.4027 -0.8734  0.7455  0.6627 -0.0718 -0.6077  0.6314 -0.4816    71.628  -146.688    35.512              
         T  <A  34   THR    > matches  <A  39   THR    >                        ( 15.2 A from    HO2 EDO A1009  )
         K  <A  60   LYS    > matches  <A 163   LYS    >                        ( 18.0 A from    HO2 EDO A1009  )
         E  <A 124   GLU    > matches  <A  70   GLU    >                        (  7.0 A from    O2  EDO A1009  )
 
KERBm  3*FOUND in 3ce2  size =    3  ^    PUTATIVE PEPTIDASE;                                     #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.3423  0.0058  0.9396  0.8613  0.4015  0.3113  0.3754 -0.9159  0.1424    10.211   -28.970    52.889              
         T  <A  34   THR    > matches  <A 391   THR    >                        ( 17.7 A from   ZN    ZN A 703  )
         K  <A  60   LYS    > matches  <A 325   LYS    >                        ( 19.6 A from   ZN    ZN A 702  )
         E  <A 124   GLU    > matches  <A 428   GLU    >                        ( -2.9 A from   ZN    ZN A 703s )
 
KERBm  3*FOUND in 4wma  size =    3  ^    XYLOSIDE XYLOSYLTRANSFERASE 1;                          #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.8351 -0.3998 -0.3779 -0.5371  0.7410  0.4030 -0.1189 -0.5395  0.8335     8.296     3.557    11.118              
         T  <A  34   THR    > matches  <A 350   THR    >                        ( 17.1 A from   MN    MN A 401  )
         K  <A  60   LYS    > matches  <A 379   LYS    >                        ( 19.8 A from   MN    MN A 401  )
         E  <A 124   GLU    > matches  <A 282   GLU    >                        ( 20.9 A from    O4  GCX D 101  )
 
KERBm  3*FOUND in 5l7v  size =    3  ^    GLYCOSIDE HYDROLASE;                                    #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.0571  0.2057 -0.9769  0.8069  0.5668  0.1665 -0.5879  0.7978  0.1337    27.714   -43.225   -16.823              
         T  <A  34   THR    > matches  <A 504   THR    >                        ( 20.5 A from    C8  GNL A 601  )
         K  <A  60   LYS    > matches  <A  61   LYS    >                        ( 24.7 A from    S1  GNL A 601  )
         E  <A 124   GLU    > matches  <A 432   GLU    >                        (  7.3 A from    S1  GNL A 601  )
 
KERBm  3*FOUND in 4mea  size =    3  ^    PREDICTED PROTEIN;                                      #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.8690 -0.4507  0.2042 -0.3829  0.8739  0.2995  0.3134 -0.1821  0.9320    16.621    -4.394    52.265              
         T  <A  34   THR    > matches  <A 327   THR    > 
         K  <A  60   LYS    > matches  <A 238   LYS    > 
         E  <A 124   GLU    > matches  <A 307   GLU    > 
 
KERBm  3*FOUND in 1kor  size =    3  ^    ARGININOSUCCINATE SYNTHETASE;                           #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.3679  0.4018 -0.8386 -0.6886  0.7238  0.0447 -0.6249 -0.5610 -0.5430    51.011   -47.160    89.090              
         T  <A  34   THR    > matches  <A 116   THR    >                        ( -2.8 A from    O2  SIN A 530s )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        (  8.3 A from    O2  SIN A 530  )
         E  <A 124   GLU    > matches  <A  39   GLU    >                        (  7.2 A from    O3G ANP A 510  )
 
KERBm  3*FOUND in 4f4o  size =    3  ^    HEMOGLOBIN SUBUNIT ALPHA;                               #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.5574 -0.8285  0.0532 -0.5984 -0.3565  0.7176  0.5756  0.4318  0.6944    26.922   -82.930    15.299              
         T  <A  34   THR    > matches  <C 291   THR    >                        ( 17.2 A from    O4  FUC C1006  )
         K  <A  60   LYS    > matches  <C 103+  LYS    >                        ( 13.0 A from    O5  FUC C1006  )
         E  <A 124   GLU    > matches  <C 255   GLU    >                        ( 18.2 A from    O5  NAG C1004  )
 
KERBm  3*FOUND in 2or0  size =    3  ^    HYDROXYLASE;                                            #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.4478 -0.7475  0.4907  0.8336 -0.1504  0.5316  0.3236 -0.6470 -0.6904    82.351   -33.893    60.670              
         T  <A  34   THR    > matches  <A 137   THR    >                        ( 26.4 A from    OXT ACT A 610  )
         K  <A  60   LYS    > matches  <A 189   LYS    >                        ( 28.0 A from    O   ACT A 611  )
         E  <A 124   GLU    > matches  <A  98   GLU    >                        ( 22.9 A from    CH3 ACT A 601  )
 
KERBm  3*FOUND in 2qga  size =    3  ^    ADENYLOSUCCINATE LYASE;                                 #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.1449  0.3342 -0.9313  0.9559 -0.1956 -0.2189  0.2553  0.9220  0.2912    39.125   -10.719   -15.263              
         T  <A  34   THR    > matches  <B 238   THR    >                        ( 22.5 A from    C2  AMP B 908  )
         K  <A  60   LYS    > matches  <B 199   LYS    >                        ( 27.3 A from    C2  AMP B 908  )
         E  <A 124   GLU    > matches  <B  46   GLU    >                        ( 25.1 A from    C2  AMP B 908  )
 
KERBm  3*FOUND in 5jld  size =    3  ^    ARGINYL-TRNA SYNTHETASE, PUTATIVE;                      #    2                            
  RMSD =     1.31 A
  TRANSFORM   -0.0354 -0.9862  0.1620 -0.9728  0.0711  0.2203  0.2288  0.1498  0.9619    19.657   -12.575   -27.968              
         T  <A  34   THR    > matches  <A 406   THR    > 
         K  <A  60   LYS    > matches  <A 410   LYS    > 
         E  <A 124   GLU    > matches  <A 143   GLU    > 
 
KERBm  3*FOUND in 3e70  size =    3  ^    SIGNAL RECOGNITION PARTICLE RECEPTOR;                   #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.1814 -0.9749  0.1289  0.8375  0.2219  0.4993  0.5154 -0.0174 -0.8568    43.415    -4.069    42.718              
         T  <A  34   THR    > matches  <C 138   THR    >                        ( -3.6 A from    O2A GDP C1001s )
         K  <A  60   LYS    > matches  <C 142   LYS    >                        ( -3.5 A from    O6  GDP C1001s )
         E  <A 124   GLU    > matches  <C 218   GLU    >                        ( 12.5 A from    O2B GDP C1001  )
 
KERBm  3*FOUND in 1ock  size =    3  ^    MALONAMIDASE E2;                                        #    3                            
  RMSD =     1.31 A
  TRANSFORM    0.2823  0.0424 -0.9584  0.1399  0.9865  0.0849 -0.9491  0.1581 -0.2725    31.602   -36.548    29.670              
         T  <A  34   THR    > matches  <A 189   THR    > 
         K  <A  60   LYS    > matches  <A 169   LYS    > 
         E  <A 124   GLU    > matches  <A 288   GLU    > 
 
KERBm  3*FOUND in 5luz  size =    3  ^    NEUROLYSIN, MITOCHONDRIAL;                              #    4                            
  RMSD =     1.31 A
  TRANSFORM    0.7111 -0.1358 -0.6898 -0.6488 -0.5047 -0.5695  0.2708 -0.8525  0.4470    25.326    11.938     5.666              
         T  <A  34   THR    > matches  <A 343   THR    >                        ( 23.1 A from   ZN    ZN A1001  )
         K  <A  60   LYS    > matches  <A 231   LYS    >                        ( 26.3 A from   ZN    ZN A1001  )
         E  <A 124   GLU    > matches  <A 617   GLU    >                        ( 11.6 A from   ZN    ZN A1001  )
 
KERBm  3*FOUND in 3cjj  size =    3  ^    ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTO     #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.1488 -0.2455  0.9579  0.9326  0.3569 -0.0534  0.3288 -0.9013 -0.2821    28.708   -51.740    37.778              
         T  <A  34   THR    > matches  <A 222   THR    >                        ( 10.1 A from    OXT ACT A   1  )
         K  <A  60   LYS    > matches  <A 123   LYS    >                        ( 12.8 A from   ZN    ZN A   3  )
         E  <A 124   GLU    > matches  <A 168   GLU    >                        (  9.2 A from    CH3 ACT A   1  )
 
KERBm  3*FOUND in 2bbh  size =    3  ^    DIVALENT CATION TRANSPORT-RELATED PROTEIN;              #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.3428 -0.0002 -0.9394  0.0533  0.9984  0.0192 -0.9379  0.0567 -0.3423    31.632   -23.447    28.926              
         T  <A  34   THR    > matches  <A  16   THR    >                        ( 15.6 A from   MG    MG A 302  )
         K  <A  60   LYS    > matches  <A  13+  LYS    >                        ( 16.3 A from   MG    MG A 302  )
         E  <A 124   GLU    > matches  <A  48   GLU    >                        ( 23.1 A from    O3  DMU A 401  )
 
KERBm  3*FOUND in 5epw  size =    3  ^    NUCLEOPROTEIN;                                          #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.8458  0.1385 -0.5153 -0.4913 -0.1745 -0.8533  0.2081 -0.9749  0.0795    41.506   -22.096    39.974              
         T  <A  34   THR    > matches  <A 307   THR    > 
         K  <A  60   LYS    > matches  <A 309   LYS    > 
         E  <A 124   GLU    > matches  <A 297   GLU    > 
 
KERBm  3*FOUND in 4fch  size =    3  ^    OUTER MEMBRANE PROTEIN SUSE;                            #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.8072  0.4175  0.4173  0.5380 -0.8113 -0.2289 -0.2429 -0.4093  0.8795    15.438   -20.937    52.279              
         T  <A  34   THR    > matches  <A 279   THR    >                        ( 13.8 A from    O1  EDO A 412  )
         K  <A  60   LYS    > matches  <A 242   LYS    >                        ( 13.3 A from    O1  EDO A 412  )
         E  <A 124   GLU    > matches  <A 228   GLU    >                        (  6.8 A from    C1  EDO A 410  )
 
KERBm  3*FOUND in 4xjq  size =    3  ^    HEMAGGLUTININ-NEURAMINIDASE;                            #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.4541 -0.6016 -0.6572  0.4174 -0.7953  0.4396  0.7871  0.0748 -0.6122   270.033   -22.355   -68.996              
         T  <A  34   THR    > matches  <A 450   THR    >                        (  7.6 A from    O6  MAN A 605  )
         K  <A  60   LYS    > matches  <A 448   LYS    >                        (  7.4 A from    C8  NAG A 602  )
         E  <A 124   GLU    > matches  <A 518   GLU    >                        (  7.8 A from    O1  EDO A 608  )
 
KERBm  3*FOUND in 5amb  size =    3  ^    ANGIOTENSIN-CONVERTING ENZYME;                          #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.3871  0.6733  0.6299 -0.9140  0.1902  0.3584 -0.1215  0.7145 -0.6890    46.573    -5.289    -0.776              
         T  <A  34   THR    > matches  <A 124   THR    >                        ( 13.9 A from    O6  NAG A1102  )
         K  <A  60   LYS    > matches  <A 126   LYS    >                        ( 15.4 A from    C1  NAG A1102  )
         E  <A 124   GLU    > matches  <A  56   GLU    >                        ( 12.0 A from    O6  NAG A1102  )
 
KERBm  3*FOUND in 3bcx  size =    3  ^    CDP-6-DEOXY-L-THREO-D-GLYCERO-4-HEXULOSE-3-DEHYDRAS     #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.7092  0.0751 -0.7010  0.4184  0.8451 -0.3328 -0.5674  0.5293  0.6308    74.782   -15.847    37.063              
         T  <A  34   THR    > matches  <A 207   THR    >                        ( 20.0 A from    N2 ABEN A 502  )
         K  <A  60   LYS    > matches  <A 203   LYS    >                        ( 19.6 A from    N2 ABEN A 502  )
         E  <A 124   GLU    > matches  <A 242   GLU    >                        ( 10.7 A from   FE    FE A 501  )
 
KERBm  3*FOUND in 3cu9  size =    3  ^    INTRACELLULAR ARABINANASE;                              #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.7077  0.4731 -0.5248  0.3058 -0.8747 -0.3761  0.6369 -0.1057  0.7637    26.079     2.246    26.771              
         T  <A  34   THR    > matches  <A 103   THR    >                        ( 10.0 A from    O1 BGOL A 450  )
         K  <A  60   LYS    > matches  <A  78   LYS    >                        (  9.7 A from    C1 AGOL A 450  )
         E  <A 124   GLU    > matches  <A 196   GLU    >                        ( 16.1 A from    O1 BGOL A 450  )
 
KERBm  3*FOUND in 2flh  size =    3  ^    CYTOKININ-SPECIFIC BINDING PROTEIN;                     #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.4586 -0.5447 -0.7021 -0.1389  0.8243 -0.5488 -0.8777  0.1542  0.4537    33.244    10.769    52.210              
         T  <A  34   THR    > matches  <A 101   THR    >                        ( 10.6 A from    C14 ZEA A 701  )
         K  <A  60   LYS    > matches  <A  99   LYS    >                        ( 12.5 A from    N9  ZEA A 701  )
         E  <A 124   GLU    > matches  <A  16   GLU    >                        ( 14.4 A from    O16 ZEA A 708  )
 
KERBm  3*FOUND in 4zdt  size =    3  ^    STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1;           #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.7560 -0.6510  0.0683 -0.3737 -0.3436  0.8616  0.5374  0.6768  0.5031    63.165   -11.643    17.664              
         T  <A  34   THR    > matches  <A 229   THR    >                        (  8.2 A from   ZN    ZN A 302  )
         K  <A  60   LYS    > matches  <A 232   LYS    >                        (  9.3 A from   ZN    ZN A 302  )
         E  <A 124   GLU    > matches  <A 191   GLU    >                        (  7.6 A from   ZN    ZN A 301  )
 
KERBm  3*FOUND in 5mst  size =    3  ^    THIOESTER REDUCTASE DOMAIN-CONTAINING PROTEIN;          #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.0585  0.9360  0.3470  0.4055  0.3399 -0.8485  0.9122 -0.0911  0.3994    20.469    11.053    57.674              
         T  <A  34   THR    > matches  <A 187   THR    >                        ( 24.2 A from   CA    CA A1201  )
         K  <A  60   LYS    > matches  <A 164   LYS    >                        ( 26.3 A from    O2P AMP A1204  )
         E  <A 124   GLU    > matches  <A 209   GLU    >                        ( 13.5 A from   CA    CA A1201  )
 
KERBm  3*FOUND in 6cn0  size =    3  ^    16S RRNA (GUANINE(1405)-N(7))-METHYLTRANSFERASE;        #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.6330  0.7404  0.2260 -0.3546 -0.0178 -0.9349  0.6882  0.6719 -0.2738    47.771    44.965   -25.593              
         T  <A  34   THR    > matches  <A 250   THR    >                        ( 20.5 A from    O1  SO4 A 301  )
         K  <A  60   LYS    > matches  <A 248+  LYS    >                        ( 17.5 A from    O1  SO4 A 301  )
         E  <A 124   GLU    > matches  <A 117   GLU    >                        ( 36.9 A from    O1  SO4 A 301  )
 
KERBm  3*FOUND in 4g3d  size =    3  ^    NF-KAPPA-BETA-INDUCING KINASE;                          #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.5547 -0.3423 -0.7584  0.6381  0.4100 -0.6517 -0.5340  0.8454  0.0090    70.162     2.335    -4.397              
         T  <A  34   THR    > matches  <A 354   THR    >                        ( 20.7 A from   MG    MG A 701  )
         K  <A  60   LYS    > matches  <A 358   LYS    >                        ( 23.2 A from   MG    MG A 701  )
         E  <A 124   GLU    > matches  <A 384   GLU    >                        ( 29.5 A from   MG    MG A 701  )
 
KERBm  3*FOUND in 2o8b  size =    3  ^    5'-D(*GP*AP*AP*CP*CP*GP*CP*GP*CP*GP*CP*TP*AP*GP*G)-     #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.2875 -0.9492  0.1278  0.2917  0.0403  0.9557  0.9123 -0.3120 -0.2653    46.576   -17.503   111.916              
         T  <A  34   THR    > matches  <B 848   THR    >                        ( 57.6 A from    O3' ADP B 202  )
         K  <A  60   LYS    > matches  <B 852   LYS    >                        ( 56.2 A from    O3' ADP B 202  )
         E  <A 124   GLU    > matches  <B 490   GLU    >                        ( 69.7 A from    O3' ADP B 202  )
 
KERBm  3*FOUND in 4fem  size =    3  ^    OUTER MEMBRANE PROTEIN SUSE;                            #    2                            
  RMSD =     1.31 A
  TRANSFORM    0.4293  0.8712 -0.2380  0.3966  0.0549  0.9163 -0.8114  0.4878  0.3220     1.734   -97.359   -16.347              
         T  <A  34   THR    > matches  <A 240   THR    >                        ( 17.7 A from    O1  EDO A 403  )
         K  <A  60   LYS    > matches  <A 242   LYS    >                        ( 16.3 A from    O1  EDO A 403  )
         E  <A 124   GLU    > matches  <A 228   GLU    >                        ( 10.7 A from    O2A ACX A 401  )
 
KERBm  3*FOUND in 5ulm  size =    3  ^    MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5;       #    1                            
  RMSD =     1.31 A
  TRANSFORM    0.8542 -0.2246 -0.4690 -0.3805 -0.8847 -0.2694  0.3544 -0.4086  0.8411    22.534    55.466   -42.534              
         T  <A  34   THR    > matches  <A 336   THR    > 
         K  <A  60   LYS    > matches  <A 339   LYS    > 
         E  <A 124   GLU    > matches  <A 295   GLU    > 
 
KERBm  3*FOUND in 4oe6  size =    3  ^    DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE,          #    2                            
  RMSD =     1.31 A
  TRANSFORM   -0.3118 -0.2649 -0.9125  0.6985  0.5871 -0.4091 -0.6440  0.7650 -0.0020   107.613    -7.617    -0.080              
         T  <A  34   THR    > matches  <A 147   THR    > 
         K  <A  60   LYS    > matches  <A 153   LYS    > 
         E  <A 124   GLU    > matches  <A 252   GLU    > 
 
KERBm  3*FOUND in 4ub9  size =    3  ^    MOLINATE HYDROLASE;                                     #    1                            
  RMSD =     1.31 A
  TRANSFORM   -0.1339  0.8280  0.5445  0.6142  0.5005 -0.6101  0.7777 -0.2527  0.5756    50.153   130.395  -117.903              
         T  <A  34   THR    > matches  <A 144   THR    >                        (  7.6 A from   ZN    ZN A 501  )
         K  <A  60   LYS    > matches  <A 240   LYS    >                        (  4.2 A from   ZN    ZN A 501  )
         E  <A 124   GLU    > matches  <A 128   GLU    >                        ( 23.6 A from   ZN    ZN A 501  )
 
KERBm  3*FOUND in 3p8c  size =    3  ^    CYTOPLASMIC FMR1-INTERACTING PROTEIN 1;                 #    8                            
  RMSD =     1.32 A
  TRANSFORM   -0.2253 -0.4851 -0.8449  0.2564 -0.8662  0.4289  0.9399  0.1200 -0.3196   244.571  -109.502    66.609              
         T  <A  34   THR    > matches  <E  26   THR    >                        ( 23.0 A from   CL    CL A1257  )
         K  <A  60   LYS    > matches  <E  30   LYS    >                        ( 19.9 A from   CL    CL A1256  )
         E  <A 124   GLU    > matches  <F  48   GLU    >                        ( 34.0 A from   CL    CL A1257  )
 
KERBm  3*FOUND in 3mwp  size =    3  ^    NUCLEOPROTEIN;                                          #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.3424  0.9328 -0.1123  0.4374 -0.0525  0.8977 -0.8315  0.3565  0.4260    41.839   -25.095    86.917              
         T  <A  34   THR    > matches  <A 116   THR    >                        ( 31.2 A from   ZN    ZN A 570  )
         K  <A  60   LYS    > matches  <A 112   LYS    >                        ( 34.9 A from   ZN    ZN A 570  )
         E  <A 124   GLU    > matches  <A  57   GLU    >                        ( 38.1 A from   ZN    ZN A 570  )
 
KERBm  3*FOUND in 5vit  size =    3  ^    MDCA;                                                   #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.4931  0.6216  0.6087  0.6917  0.1443 -0.7077  0.5277 -0.7699  0.3588   -95.773    35.332    73.435              
         T  <A  34   THR    > matches  <C  46   THR    >                        ( 35.9 A from    O9  MLI A 601  )
         K  <A  60   LYS    > matches  <C   1+  LYS    >                        ( 40.2 A from    O9  MLI A 601  )
         E  <A 124   GLU    > matches  <A 466   GLU    >                        ( 28.4 A from    O8  MLI A 601  )
 
KERBm  3*FOUND in 5nc9  size =    3  ^    PEPTIDOGLYCAN N-ACETYLGLUCOSAMINE DEACETYLASE;          #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.4057  0.6754  0.6159  0.9121 -0.3425 -0.2253 -0.0587 -0.6531  0.7550   -44.374     6.496   -54.063              
         T  <A  34   THR    > matches  <A 129   THR    >                        ( 11.5 A from   ZN    ZN A 302  )
         K  <A  60   LYS    > matches  <A 134   LYS    >                        ( 16.1 A from   ZN    ZN A 302  )
         E  <A 124   GLU    > matches  <A 116   GLU    >                        ( 13.2 A from    O02 8SZ A 301  )
 
KERBm  3*FOUND in 3agx  size =    3  ^    DNAJ HOMOLOG SUBFAMILY B MEMBER 1;                      #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.5359  0.4080 -0.7392  0.7151 -0.6848  0.1405  0.4489  0.6039  0.6587    74.145   -28.745   -28.830              
         T  <A  34   THR    > matches  <A 180   THR    > 
         K  <A  60   LYS    > matches  <A 182   LYS    > 
         E  <A 124   GLU    > matches  <A 309   GLU    > 
 
KERBm  3*FOUND in 4ll6  size =    3  ^    MYOSIN-4;                                               #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.0586  0.9690 -0.2400 -0.4480 -0.2404 -0.8611  0.8921 -0.0571 -0.4482    28.365    77.661    30.154              
         T  <A  34   THR    > matches  <A1119   THR    >                        ( 47.3 A from    OXT ACY A1501  )
         K  <A  60   LYS    > matches  <A1165   LYS    >                        ( 48.5 A from    OXT ACY A1501  )
         E  <A 124   GLU    > matches  <A1130   GLU    >                        ( 50.0 A from    OXT ACY A1501  )
 
KERBm  3*FOUND in 5ks7  size =    3  ^    CARNITINE TRANSPORT ATP-BINDING PROTEIN OPUCA;          #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.0175  0.6888 -0.7248 -0.7137  0.5162  0.4734 -0.7002 -0.5090 -0.5006    10.157    -5.501    11.297              
         T  <A  34   THR    > matches  <A 263   THR    > 
         K  <A  60   LYS    > matches  <A 266   LYS    > 
         E  <A 124   GLU    > matches  <A 324   GLU    > 
 
KERBm  3*FOUND in 4oqv  size =    3  ^    DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRI     #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.7319 -0.3137  0.6049  0.6748  0.2108 -0.7072 -0.0943 -0.9258 -0.3660    11.045    22.515    -4.483              
         T  <A  34   THR    > matches  <A 324   THR    >                        ( 16.1 A from    OXT ACY A 505  )
         K  <A  60   LYS    > matches  <A 273   LYS    >                        ( 20.4 A from    OXT ACY A 505  )
         E  <A 124   GLU    > matches  <A 344   GLU    >                        (  4.1 A from    CH3 ACY A 505  )
 
KERBm  3*FOUND in 4ar9  size =    3  ^    COLLAGENASE COLT;                                       #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.9971 -0.0263  0.0714  0.0703 -0.0407 -0.9967 -0.0292 -0.9988  0.0388    36.418   -23.009    20.989              
         T  <A  34   THR    > matches  <A 411   THR    >                        ( 16.9 A from   CA    CA A1732  )
         K  <A  60   LYS    > matches  <A 367   LYS    >                        ( 23.6 A from   ZN    ZN A1731  )
         E  <A 124   GLU    > matches  <A 402   GLU    >                        (  4.8 A from   CA    CA A1732  )
 
KERBm  3*FOUND in 4usk  size =    3  ^    PUTATIVE SUGAR KINASE;                                  #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.6272  0.6276 -0.4612  0.4987  0.7785  0.3811 -0.5982 -0.0090  0.8013    37.618   -10.461    -9.320              
         T  <A  34   THR    > matches  <A 339   THR    >                        ( 15.2 A from   CL    CL A 404  )
         K  <A  60   LYS    > matches  <A 128   LYS    >                        ( 19.2 A from   CL    CL A 404  )
         E  <A 124   GLU    > matches  <A 199   GLU    >                        ( 18.9 A from   CL    CL A 403  )
 
KERBm  3*FOUND in 4e40  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.1454 -0.8941 -0.4237  0.8018 -0.3574  0.4789  0.5796  0.2701 -0.7689     5.068   -32.261     4.171              
         T  <A  34   THR    > matches  <A 123   THR    > 
         K  <A  60   LYS    > matches  <A 127   LYS    > 
         E  <A 124   GLU    > matches  <A 218   GLU    > 
 
KERBm  3*FOUND in 4a01  size =    3  ^    PROTON PYROPHOSPHATASE;                                 #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.1348 -0.5035 -0.8534  0.9034 -0.4162  0.1029  0.4070  0.7571 -0.5110   107.759    24.101    -8.421              
         T  <A  34   THR    > matches  <A  91   THR    >                        (  6.1 A from    O4  DMU A1776  )
         K  <A  60   LYS    > matches  <A  94   LYS    >                        (  7.1 A from    O2  DMU A1776  )
         E  <A 124   GLU    > matches  <A 607   GLU    >                        ( 16.1 A from    O3  DMU A1776  )
 
KERBm  3*FOUND in 3w5f  size =    3  ^    BETA-GALACTOSIDASE;                                     #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.5281  0.3296 -0.7826 -0.1461 -0.8726 -0.4661  0.8365 -0.3605  0.4127    28.593    44.493     5.906              
         T  <A  34   THR    > matches  <A 197   THR    >                        ( 13.7 A from    O1S EPE A 804  )
         K  <A  60   LYS    > matches  <A 194   LYS    >                        ( 16.0 A from    O1S EPE A 804  )
         E  <A 124   GLU    > matches  <A  72   GLU    >                        ( -4.5 A from   CL    CL A 807s )
 
KERBm  3*FOUND in 4oua  size =    3  ^    PROTEOLYTICALLY ACTIVATED FORM OF PPO4 TYROSINASE;      #    2                            
  RMSD =     1.32 A
  TRANSFORM    0.8734  0.1706  0.4561 -0.4615 -0.0090  0.8871 -0.1554  0.9853 -0.0708   -15.938   -17.862   -18.526              
         T  <A  34   THR    > matches  <A 332   THR    >                        (  8.6 A from    CB  SAC A   2  )
         K  <A  60   LYS    > matches  <A 335   LYS    >                        ( 11.8 A from    C2A SAC A   2  )
         E  <A 124   GLU    > matches  <A 125   GLU    >                        ( 13.4 A from    O18 TEW A 405  )
 
KERBm  3*FOUND in 4eqb  size =    3  ^    SPERMIDINE/PUTRESCINE ABC SUPERFAMILY ATP BINDING C     #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.9236 -0.0065  0.3834 -0.0488  0.9937 -0.1008  0.3803  0.1118  0.9181    29.551    -1.303    19.454              
         T  <A  34   THR    > matches  <A 270   THR    >                        ( 16.6 A from   CA    CA A 403  )
         K  <A  60   LYS    > matches  <A 272   LYS    >                        ( 20.5 A from   CA    CA A 403  )
         E  <A 124   GLU    > matches  <A  71   GLU    >                        ( 10.1 A from    C3 AEPE A 406  )
 
KERBm  3*FOUND in 5t3e  size =    3  ^    BACILLAMIDE SYNTHETASE HETEROCYCLIZATION DOMAIN;        #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.6567 -0.3679  0.6583 -0.6586  0.7051 -0.2629  0.3674  0.6062  0.7053    54.553    -9.029   -62.456              
         T  <A  34   THR    > matches  <A1072   THR    >                        ( 27.7 A from    O3  SO4 A1301  )
         K  <A  60   LYS    > matches  <A1075   LYS    >                        ( 32.7 A from    O3  SO4 A1301  )
         E  <A 124   GLU    > matches  <A 881   GLU    >                        ( 18.6 A from    O3  SO4 A1301  )
 
KERBm  3*FOUND in 4mdy  size =    3  ^    PERIPLASMIC BINDING PROTEIN;                            #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.7320 -0.3858  0.5616 -0.1541  0.7092  0.6880  0.6637  0.5901 -0.4596    14.208   -11.091    -9.735              
         T  <A  34   THR    > matches  <A 185   THR    >                        ( 23.8 A from    O4  PEG A 401  )
         K  <A  60   LYS    > matches  <A 188   LYS    >                        ( 25.0 A from    O4  PEG A 401  )
         E  <A 124   GLU    > matches  <A 172   GLU    >                        ( 26.6 A from    C4  PEG A 401  )
 
KERBm  3*FOUND in 2esr  size =    3  ^    METHYLTRANSFERASE;                                      #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.2109  0.4093  0.8877 -0.6995  0.5711 -0.4295  0.6828  0.7116 -0.1658   -31.660    22.271     9.939              
         T  <A  34   THR    > matches  <A 148   THR    > 
         K  <A  60   LYS    > matches  <A 173   LYS    > 
         E  <A 124   GLU    > matches  <A  99   GLU    > 
 
KERBm  3*FOUND in 3qdk  size =    3  ^    RIBULOKINASE;                                           #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.8828  0.3526 -0.3104  0.1342  0.4440  0.8859 -0.4502  0.8237 -0.3446   -36.842   -61.570     6.667              
         T  <A  34   THR    > matches  <A  70   THR    >                        ( 22.9 A from    O3  QDK A 573  )
         K  <A  60   LYS    > matches  <A 259   LYS    >                        ( 26.7 A from    O3  QDK A 573  )
         E  <A 124   GLU    > matches  <A  15   GLU    >                        ( 12.1 A from    O5  QDK A 573  )
 
KERBm  3*FOUND in 4tko  size =    3  ^    EMRA;                                                   #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.4019 -0.4142  0.8166  0.1596 -0.9099 -0.3830 -0.9017  0.0236 -0.4317  -144.441   127.071   167.776              
         T  <A  34   THR    > matches  <B 244   THR    >                        ( 12.2 A from    H13 IPA B 403  )
         K  <A  60   LYS    > matches  <B  74   LYS    >                        ( 18.2 A from    H13 IPA B 403  )
         E  <A 124   GLU    > matches  <B 232   GLU    >                        ( 15.9 A from    H33 IPA B 403  )
 
KERBm  3*FOUND in 2b1x  size =    3  ^    NAPHTHALENE DIOXYGENASE LARGE SUBUNIT;                  #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.5235 -0.7484  0.4072 -0.5821 -0.0349 -0.8124 -0.6222  0.6623  0.4174    20.166    69.977   -34.104              
         T  <A  34   THR    > matches  <B 613   THR    >                        ( 43.8 A from    O4  MPD A1703  )
         K  <A  60   LYS    > matches  <B 513+  LYS    >                        ( 46.2 A from    O4  MPD A1703  )
         E  <A 124   GLU    > matches  <B 547   GLU    >                        ( 26.9 A from    O4  MPD A1702  )
 
KERBm  3*FOUND in 5cdd  size =    3  ^    STRUCTURAL POLYPROTEIN, VP1;                            #    1                            
  RMSD =     1.32 A
  TRANSFORM    0.7760  0.5405  0.3249  0.5232 -0.8395  0.1469 -0.3522 -0.0560  0.9343     4.582    55.897    18.161              
         T  <A  34   THR    > matches  <B  70   THR    > 
         K  <A  60   LYS    > matches  <B  72   LYS    > 
         E  <A 124   GLU    > matches  <B 124   GLU    > 
 
KERBm  3*FOUND in 3lmd  size =    3  ^    GERANYLGERANYL PYROPHOSPHATE SYNTHASE;                  #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.1529 -0.9881 -0.0141  0.2979 -0.0325 -0.9540 -0.9423  0.1501 -0.2993    71.557    10.960    18.302              
         T  <A  34   THR    > matches  <A 343   THR    > 
         K  <A  60   LYS    > matches  <A 347   LYS    > 
         E  <A 124   GLU    > matches  <A  85   GLU    > 
 
KERBm  3*FOUND in 3mi6  size =    3  ^    ALPHA-GALACTOSIDASE;                                    #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.5678  0.2156 -0.7944 -0.8184 -0.2508  0.5170  0.0878 -0.9437 -0.3189    72.992    52.938    61.545              
         T  <A  34   THR    > matches  <A 729   THR    > 
         K  <A  60   LYS    > matches  <A 591   LYS    > 
         E  <A 124   GLU    > matches  <A 243   GLU    > 
 
KERBm  3*FOUND in 1yzh  size =    3  ^    TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE;                 #    1                            
  RMSD =     1.32 A
  TRANSFORM   -0.3779  0.9258 -0.0110 -0.0716 -0.0410 -0.9966  0.9231  0.3758 -0.0818    22.626    20.949   -13.609              
         T  <A  34   THR    > matches  <A 134   THR    > 
         K  <A  60   LYS    > matches  <A 127   LYS    > 
         E  <A 124   GLU    > matches  <A 145   GLU    > 
 
KERBm  3*FOUND in 5xf7  size =    3  ^    PROTEIN DISULFIDE-ISOMERASE-LIKE PROTEIN OF THE TES     #    4                            
  RMSD =     1.32 A
  TRANSFORM   -0.7398  0.2851  0.6094  0.6573  0.4999  0.5640  0.1439 -0.8178  0.5573    36.031   -39.840    31.655              
         T  <A  34   THR    > matches  <A 263   THR    > 
         K  <A  60   LYS    > matches  <A 266   LYS    > 
         E  <A 124   GLU    > matches  <A 140   GLU    > 
 
KERBm  3*FOUND in 1tjl  size =    3  ^    DNAK SUPPRESSOR PROTEIN;                                #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.6396 -0.1584  0.7522  0.5471 -0.7812  0.3008 -0.5400 -0.6039 -0.5863    31.398   -19.151    24.323              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 15.8 A from   ZN    ZN A 200  )
         K  <A  60   LYS    > matches  <A  98   LYS    >                        ( 13.6 A from   ZN    ZN A 200  )
         E  <A 124   GLU    > matches  <A  25   GLU    >                        ( 19.7 A from   ZN    ZN A 200  )
 
KERBm  3*FOUND in 5l7r  size =    3  ^    GLYCOSIDE HYDROLASE;                                    #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.0624  0.1837 -0.9810  0.8122  0.5618  0.1569 -0.5800  0.8066  0.1142    29.686   -42.709   -16.853              
         T  <A  34   THR    > matches  <A 504   THR    >                        ( 21.4 A from    O2  EDO A 602  )
         K  <A  60   LYS    > matches  <A  61   LYS    >                        ( 25.1 A from    O2  EDO A 602  )
         E  <A 124   GLU    > matches  <A 432   GLU    >                        (  8.3 A from    O2  EDO A 602  )
 
KERBm  3*FOUND in 2fpn  size =    3  ^    YWMB;                                                   #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.9614 -0.2734 -0.0324  0.1841 -0.5513 -0.8138 -0.2046  0.7883 -0.5803    75.766    -2.563    32.058              
         T  <A  34   THR    > matches  <A  22   THR    > 
         K  <A  60   LYS    > matches  <A  20   LYS    > 
         E  <A 124   GLU    > matches  <A 123   GLU    > 
 
KERBm  3*FOUND in 4eco  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    3                            
  RMSD =     1.33 A
  TRANSFORM   -0.5285 -0.6929 -0.4906 -0.7617  0.6422 -0.0865 -0.3750 -0.3279  0.8671   149.711    80.314    41.139              
         T  <A  34   THR    > matches  <A 634   THR    >                        ( 40.0 A from   NA    NA A1001  )
         K  <A  60   LYS    > matches  <A 658   LYS    >                        ( 42.1 A from   NA    NA A1001  )
         E  <A 124   GLU    > matches  <A 557   GLU    >                        ( 33.6 A from   NA    NA A1001  )
 
KERBm  3*FOUND in 1bqu  size =    3  ^    PROTEIN (GP130);                                        #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.9764  0.0681  0.2049 -0.0797  0.9956  0.0489  0.2007  0.0640 -0.9776   -29.156   -25.807    20.448              
         T  <A  34   THR    > matches  <A 125   THR    >                        (  9.1 A from    O3  SO4 A 402  )
         K  <A  60   LYS    > matches  <A 123   LYS    >                        ( 11.0 A from    O3  SO4 A 402  )
         E  <A 124   GLU    > matches  <A  20   GLU    >                        (  4.3 A from    O3  GOL A 505  )
 
KERBm  3*FOUND in 2di4  size =    3  ^    CELL DIVISION PROTEIN FTSH HOMOLOG;                     #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.7292  0.1592 -0.6655  0.1692 -0.9004 -0.4008  0.6631  0.4048 -0.6297   101.741     3.419     1.698              
         T  <A  34   THR    > matches  <A 556   THR    >                        ( 19.0 A from   HG    HG A1001  )
         K  <A  60   LYS    > matches  <A 552   LYS    >                        ( 19.8 A from   HG    HG A1001  )
         E  <A 124   GLU    > matches  <A 568   GLU    >                        ( 23.4 A from   HG    HG A1001  )
 
KERBm  3*FOUND in 4kgd  size =    3  ^    PYRUVATE OXIDASE;                                       #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.6851 -0.1714 -0.7080  0.6951 -0.4445 -0.5650  0.2179  0.8792 -0.4237   103.689   -18.282   -48.747              
         T  <A  34   THR    > matches  <A  73   THR    >                        (  8.2 A from    O3  GOL A 705  )
         K  <A  60   LYS    > matches  <A  75   LYS    >                        ( -4.8 A from    O3  GOL A 705s )
         E  <A 124   GLU    > matches  <A 385   GLU    >                        (  5.9 A from    O2  GOL A 706  )
 
KERBm  3*FOUND in 3gf3  size =    3  ^    GLUTACONYL-COA DECARBOXYLASE SUBUNIT A;                 #    2                            
  RMSD =     1.33 A
  TRANSFORM   -0.0325  0.0740  0.9967  0.1546 -0.9849  0.0782 -0.9875 -0.1566 -0.0205    47.946    -4.735    -5.095              
         T  <A  34   THR    > matches  <A 418   THR    >                        (  9.1 A from   CL    CL A 590  )
         K  <A  60   LYS    > matches  <A 456   LYS    >                        ( 14.6 A from   CL    CL A 590  )
         E  <A 124   GLU    > matches  <A 425   GLU    >                        ( 17.4 A from   CL    CL A 590  )
 
KERBm  3*FOUND in 4qhw  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.9643  0.0650 -0.2569 -0.2344 -0.6612  0.7127  0.1235 -0.7474 -0.6528    60.398    16.398    73.826              
         T  <A  34   THR    > matches  <A 141   THR    >                        ( 14.8 A from    O1  SO4 A 516  )
         K  <A  60   LYS    > matches  <A  19+  LYS    >                        ( 19.8 A from    O4  SO4 A 517  )
         E  <A 124   GLU    > matches  <A 391   GLU    >                        ( -4.9 A from    O2  PEG A 512s )
 
KERBm  3*FOUND in 1rp4  size =    3  ^    HYPOTHETICAL 65.0 KDA PROTEIN IN COX14-COS3             #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.3798 -0.6104  0.6951  0.9245 -0.2246  0.3080  0.0319 -0.7596 -0.6497    51.468   -28.473    53.180              
         T  <A  34   THR    > matches  <A 368   THR    >                        ( 15.6 A from   CD    CD A 801  )
         K  <A  60   LYS    > matches  <A 371   LYS    >                        ( 11.3 A from   CD    CD A 801  )
         E  <A 124   GLU    > matches  <A 408   GLU    >                        ( -2.8 A from   CD    CD A 802s )
 
KERBm  3*FOUND in 3eki  size =    3  ^    HIGH AFFINITY TRANSPORT SYSTEM PROTEIN P37;             #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.0339  0.2718  0.9618 -0.5183  0.8180 -0.2494  0.8545  0.5069 -0.1132   -24.969    -5.015   -32.634              
         T  <A  34   THR    > matches  <A 264   THR    >                        ( 12.9 A from    O1B TPP A 551  )
         K  <A  60   LYS    > matches  <A 267   LYS    >                        ( 16.0 A from   BR    BR A 607  )
         E  <A 124   GLU    > matches  <A 146   GLU    >                        ( 11.8 A from    C6  TPP A 551  )
 
KERBm  3*FOUND in 3mgu  size =    3  ^    PKHD-TYPE HYDROXYLASE TPA1;                             #    2                            
  RMSD =     1.33 A
  TRANSFORM   -0.7185 -0.6808  0.1424  0.2501 -0.4440 -0.8604 -0.6490  0.5826 -0.4893    15.877   -28.012   -28.073              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 13.6 A from   FE   FE2 A1501  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        ( 16.9 A from   FE   FE2 A1501  )
         E  <A 124   GLU    > matches  <A 535   GLU    >                        ( 28.2 A from   FE   FE2 A1501  )
 
KERBm  3*FOUND in 3zgb  size =    3  ^    PHOSPHOENOLPYRUVATE CARBOXYLASE;                        #    3                            
  RMSD =     1.33 A
  TRANSFORM    0.5806 -0.3565 -0.7320  0.1476 -0.8381  0.5252  0.8007  0.4130  0.4339    30.277     4.204    -3.030              
         T  <A  34   THR    > matches  <A 965   THR    >                        ( -6.1 A from    O2  EDO A1968s )
         K  <A  60   LYS    > matches  <A 829   LYS    >                        ( -2.8 A from    OD2 ASP A1967s )
         E  <A 124   GLU    > matches  <A 560   GLU    >                        (  5.5 A from    O4  SO4 A1970  )
 
KERBm  3*FOUND in 2f6h  size =    3  ^    MYOSIN-2;                                               #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.9183 -0.0790  0.3879  0.3633 -0.2207 -0.9052 -0.1571 -0.9721  0.1740    -6.875    30.864    54.763              
         T  <A  34   THR    > matches  <X  45   THR    > 
         K  <A  60   LYS    > matches  <X  50   LYS    > 
         E  <A 124   GLU    > matches  <X  35   GLU    > 
 
KERBm  3*FOUND in 4ztk  size =    3  ^    CELL DIVISION PROTEIN FTSI/PENICILLIN BINDING PROTE     #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.7649  0.4228  0.4860 -0.4086 -0.2648  0.8734 -0.4980  0.8667  0.0298   -12.682    -7.816     0.236              
         T  <A  34   THR    > matches  <A 401   THR    >                        (  7.7 A from    O1  NHE A 901  )
         K  <A  60   LYS    > matches  <A 568   LYS    >                        ( -3.0 A from    O2  NHE A 901s )
         E  <A 124   GLU    > matches  <A 389   GLU    >                        ( 22.7 A from    O1  NHE A 901  )
 
KERBm  3*FOUND in 6fmd  size =    3  ^    DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRI     #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.6656 -0.4609 -0.5869  0.1590 -0.6808  0.7150  0.7292  0.5692  0.3799    10.297    22.283    -4.638              
         T  <A  34   THR    > matches  <A 324   THR    >                        (  8.9 A from    C3  PGE A 419  )
         K  <A  60   LYS    > matches  <A 273   LYS    >                        ( 10.2 A from    O2  GOL A 412  )
         E  <A 124   GLU    > matches  <A 344   GLU    >                        ( 10.6 A from    O   ACT A 408  )
 
KERBm  3*FOUND in 2zy4  size =    3  ^    L-ASPARTATE BETA-DECARBOXYLASE;                         #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.4134  0.7516  0.5140 -0.7074  0.6205 -0.3384  0.5733  0.2238 -0.7882  -118.164    36.995   -31.009              
         T  <A  34   THR    > matches  <A 205   THR    >                        ( 10.8 A from    C2A PLP A 900  )
         K  <A  60   LYS    > matches  <A   3   LYS    >                        ( 17.2 A from    O3  PLP A 900  )
         E  <A 124   GLU    > matches  <A 237   GLU    >                        ( 20.1 A from    C2A PLP A 900  )
 
KERBm  3*FOUND in 3n1f  size =    3  ^    INDIAN HEDGEHOG PROTEIN;                                #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.8969  0.4417 -0.0218  0.2170 -0.4825 -0.8486  0.3854 -0.7564  0.5286   -23.711     7.157    -6.414              
         T  <A  34   THR    > matches  <A 155   THR    >                        ( 15.9 A from   ZN    ZN A   2  )
         K  <A  60   LYS    > matches  <A 162   LYS    >                        ( 21.2 A from   ZN    ZN A   2  )
         E  <A 124   GLU    > matches  <C 912   GLU    >                        ( 19.2 A from   CA    CA A   8  )
 
KERBm  3*FOUND in 2gu2  size =    3  ^    ASPA PROTEIN;                                           #    2                            
  RMSD =     1.33 A
  TRANSFORM    0.0661 -0.4140 -0.9079  0.4753 -0.7869  0.3934  0.8773  0.4575 -0.1448    36.135    17.621   -21.768              
         T  <A  34   THR    > matches  <A  31   THR    >                        ( 16.8 A from   ZN    ZN A 601  )
         K  <A  60   LYS    > matches  <A  35   LYS    >                        ( 22.0 A from   ZN    ZN A 601  )
         E  <A 124   GLU    > matches  <A 177   GLU    >                        (  5.0 A from   ZN    ZN A 601  )
 
KERBm  3*FOUND in 4yus  size =    3  ^    FAMILY 3 ADENYLATE CYCLASE;                             #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.8777  0.4763  0.0523  0.3549  0.7195 -0.5969  0.3220  0.5054  0.8006    10.351   -15.809    16.110              
         T  <A  34   THR    > matches  <A   5   THR    >                        ( 12.1 A from    O4  FMN A 401  )
         K  <A  60   LYS    > matches  <A  77   LYS    >                        ( 17.5 A from    O4  FMN A 401  )
         E  <A 124   GLU    > matches  <A  20   GLU    >                        ( 11.8 A from    C7M FMN A 401  )
 
KERBm  3*FOUND in 5y6h  size =    3  ^    FLAGELLAR BRAKE PROTEIN YCGR;                           #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.7950 -0.6035 -0.0615  0.2617 -0.2497 -0.9323 -0.5473  0.7572 -0.3565    12.921   -10.018    32.244              
         T  <A  34   THR    > matches  <A  74   THR    > 
         K  <A  60   LYS    > matches  <A  81   LYS    > 
         E  <A 124   GLU    > matches  <A  60   GLU    > 
 
KERBm  3*FOUND in 1dw0  size =    3  ^    CYTOCHROME C;                                           #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.4915 -0.8708 -0.0160 -0.7606  0.4202  0.4948  0.4241 -0.2554  0.8688    50.066   -39.382   -78.662              
         T  <A  34   THR    > matches  <A  76   THR    >                        (  6.8 A from    O2ABHEM A 113  )
         K  <A  60   LYS    > matches  <A   1+  LYS    >                        ( 11.0 A from    O2AAHEM A 113  )
         E  <A 124   GLU    > matches  <A  62   GLU    >                        (  9.9 A from    O1D HEM A 113  )
 
KERBm  3*FOUND in 3ihg  size =    3  ^    RDME;                                                   #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.2391 -0.3089 -0.9206 -0.1009  0.9350 -0.3399 -0.9657 -0.1742 -0.1924    20.334   -51.482    28.513              
         T  <A  34   THR    > matches  <A 313   THR    >                        (  7.3 A from    O3' FAD A 536  )
         K  <A  60   LYS    > matches  <A 311   LYS    >                        (  6.7 A from    O3' FAD A 536  )
         E  <A 124   GLU    > matches  <A 380   GLU    >                        ( 13.6 A from    O2  SO4 A 539  )
 
KERBm  3*FOUND in 1sr8  size =    3  ^    COBALAMIN BIOSYNTHESIS PROTEIN (CBID);                  #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.7950  0.2422 -0.5562 -0.5022 -0.7771  0.3794  0.3403 -0.5809 -0.7394    13.198    21.995    63.002              
         T  <A  34   THR    > matches  <A  44   THR    > 
         K  <A  60   LYS    > matches  <A  91   LYS    > 
         E  <A 124   GLU    > matches  <A 128   GLU    > 
 
KERBm  3*FOUND in 4v3d  size =    3  ^    HB3VAR03 CIDRA DOMAIN;                                  #    1                            
  RMSD =     1.33 A
  TRANSFORM   -0.1886 -0.8164 -0.5458  0.3423  0.4662 -0.8158 -0.9205  0.3406 -0.1915   -35.468   -29.650    -7.180              
         T  <A  34   THR    > matches  <A 634   THR    > 
         K  <A  60   LYS    > matches  <A 499+  LYS    > 
         E  <A 124   GLU    > matches  <A 623   GLU    > 
 
KERBm  3*FOUND in 3wkx  size =    3  ^    NON-REDUCING END BETA-L-ARABINOFURANOSIDASE;            #    3                            
  RMSD =     1.33 A
  TRANSFORM    0.2030 -0.6643 -0.7194  0.6246 -0.4779  0.6176  0.7541  0.5747 -0.3179    25.749    -5.885   -22.707              
         T  <A  34   THR    > matches  <A 312   THR    >                        ( 15.8 A from   ZN    ZN A 702  )
         K  <A  60   LYS    > matches  <A 367   LYS    >                        ( 21.0 A from   ZN    ZN A 702  )
         E  <A 124   GLU    > matches  <A 651   GLU    >                        ( 26.9 A from   ZN    ZN A 702  )
 
KERBm  3*FOUND in 4gpv  size =    3  ^    PUTATIVE CELL ADHESION PROTEIN;                         #    2                            
  RMSD =     1.33 A
  TRANSFORM   -0.8112  0.2304 -0.5375  0.2601 -0.6811 -0.6845  0.5238  0.6950 -0.4926    40.745    37.475   -98.453              
         T  <A  34   THR    > matches  <A 121   THR    >                        ( 29.4 A from    O1  TRS A 401  )
         K  <A  60   LYS    > matches  <A 123   LYS    >                        ( 34.5 A from    O1  TRS A 401  )
         E  <A 124   GLU    > matches  <A 225   GLU    >                        ( 22.1 A from    O1  TRS A 401  )
 
KERBm  3*FOUND in 4q2c  size =    3  ^    CRISPR-ASSOCIATED HELICASE CAS3;                        #    1                            
  RMSD =     1.33 A
  TRANSFORM    0.3579 -0.9171 -0.1755  0.7087  0.1445  0.6906  0.6080  0.3715 -0.7017    77.112    10.051    14.082              
         T  <A  34   THR    > matches  <A 820   THR    >                        ( 21.7 A from   NI    NI A1002  )
         K  <A  60   LYS    > matches  <A 803   LYS    >                        ( 28.3 A from   NI    NI A1002  )
         E  <A 124   GLU    > matches  <A 147   GLU    >                        ( 17.7 A from   NI    NI A1002  )
 
KERBm  3*FOUND in 2ixd  size =    3  ^    LMBE-RELATED PROTEIN;                                   #    2                            
  RMSD =     1.33 A
  TRANSFORM    0.7404  0.4522 -0.4973 -0.3149 -0.4202 -0.8510  0.5938 -0.7867  0.1688    60.760   152.709    17.966              
         T  <A  34   THR    > matches  <A  23   THR    >                        ( 17.7 A from   ZN    ZN A1234  )
         K  <A  60   LYS    > matches  <A  26   LYS    >                        ( 23.9 A from   ZN    ZN A1234  )
         E  <A 124   GLU    > matches  <A 121   GLU    >                        ( 18.1 A from   ZN    ZN A1234  )
 
KERBm  3*FOUND in 4zla  size =    3  ^    CYTOSOL AMINOPEPTIDASE;                                 #    2                            
  RMSD =     1.33 A
  TRANSFORM   -0.1571 -0.9102 -0.3831  0.4793 -0.4095  0.7763  0.8635  0.0616 -0.5006    12.630    -1.598   -50.789              
         T  <A  34   THR    > matches  <A  95   THR    >                        ( 33.9 A from   NA    NA A 503  )
         K  <A  60   LYS    > matches  <A 146   LYS    >                        ( 36.0 A from   NA    NA A 503  )
         E  <A 124   GLU    > matches  <A 490   GLU    >                        ( 26.3 A from   NA    NA A 503  )
 
KERBm  3*FOUND in 5h2z  size =    3  ^    DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRI     #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.7311  0.3294  0.5975 -0.6728 -0.2021 -0.7117  0.1137  0.9223 -0.3693    10.623    22.498    -4.901              
         T  <A  34   THR    > matches  <A 324   THR    >                        ( 18.0 A from    CH3 ACT A 406  )
         K  <A  60   LYS    > matches  <A 273   LYS    >                        ( 17.7 A from    CH3 ACT A 406  )
         E  <A 124   GLU    > matches  <A 344   GLU    >                        ( 14.1 A from    O1P FMN A 401  )
 
KERBm  3*FOUND in 5xoz  size =    3  ^    TRYPSIN PROTEIN INHIBITOR 2;                            #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.9997  0.0124  0.0212  0.0219  0.0631  0.9978 -0.0110 -0.9979  0.0633    31.236   -28.697    53.748              
         T  <A  34   THR    > matches  <A  93   THR    > 
         K  <A  60   LYS    > matches  <A  28   LYS    > 
         E  <A 124   GLU    > matches  <A 123   GLU    > 
 
KERBm  3*FOUND in 4wka  size =    3  ^    CHITOTRIOSIDASE-1;                                      #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.1115  0.6570 -0.7456  0.0901  0.7538  0.6508 -0.9897 -0.0054  0.1433    13.792   -32.646    26.381              
         T  <A  34   THR    > matches  <A  92   THR    >                        ( 30.3 A from    O41 TLA A 401  )
         K  <A  60   LYS    > matches  <A  84   LYS    >                        ( 31.2 A from    O41 TLA A 401  )
         E  <A 124   GLU    > matches  <A 140   GLU    >                        ( 22.6 A from    O41 TLA A 401  )
 
KERBm  3*FOUND in 1zmt  size =    3  ^    HALOALCOHOL DEHALOGENASE HHEC;                          #    1                            
  RMSD =     1.34 A
  TRANSFORM    0.6178  0.0912  0.7810  0.0134 -0.9943  0.1055 -0.7862  0.0547  0.6155   -20.602   -14.798     4.385              
         T  <A  34   THR    > matches  <A 189   THR    >                        ( 16.0 A from    C8  RNO A1002  )
         K  <A  60   LYS    > matches  <A 193   LYS    >                        ( 16.5 A from    C8  RNO A1002  )
         E  <A 124   GLU    > matches  <A  40   GLU    >                        ( 22.4 A from    O1  RNO A1002  )
 
KERBm  3*FOUND in 1zkd  size =    3  ^    DUF185;                                                 #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.3089 -0.9381 -0.1568  0.9253 -0.3345  0.1785  0.2199  0.0899 -0.9714    89.940   -31.146   126.942              
         T  <A  34   THR    > matches  <A  53   THR    > 
         K  <A  60   LYS    > matches  <A  51+  LYS    > 
         E  <A 124   GLU    > matches  <A 223   GLU    > 
 
KERBm  3*FOUND in 3q23  size =    3  ^    VIRION RNA POLYMERASE;                                  #    2                            
  RMSD =     1.34 A
  TRANSFORM   -0.3211 -0.8603 -0.3959  0.9185 -0.3847  0.0910  0.2306  0.3344 -0.9138    23.266   -90.898   290.668              
         T  <A  34   THR    > matches  <A  72   THR    >                        ( 37.8 A from    O4' G2P A1111  )
         K  <A  60   LYS    > matches  <A  74   LYS    >                        ( 35.7 A from    O4' G2P A1111  )
         E  <A 124   GLU    > matches  <A  97   GLU    >                        ( 45.2 A from    O2A G2P A1111  )
 
KERBm  3*FOUND in 4ynu  size =    3  ^    GLUCOSE OXIDASE, PUTATIVE;                              #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.0501  0.4967 -0.8665  0.8579 -0.4228 -0.2920  0.5114  0.7580  0.4050    67.602    13.724   -54.271              
         T  <A  34   THR    > matches  <A   5   THR    >                        ( 18.9 A from    C2A FAD A 601  )
         K  <A  60   LYS    > matches  <A   3+  LYS    >                        ( 18.4 A from    C2A FAD A 601  )
         E  <A 124   GLU    > matches  <A 247   GLU    >                        ( 24.9 A from    N6A FAD A 601  )
 
KERBm  3*FOUND in 3kpt  size =    3  ^    COLLAGEN ADHESION PROTEIN;                              #    1                            
  RMSD =     1.34 A
  TRANSFORM    0.4408  0.6752 -0.5914 -0.0803  0.6859  0.7232 -0.8940  0.2713 -0.3566    59.444   -75.539    80.961              
         T  <A  34   THR    > matches  <A 505   THR    > 
         K  <A  60   LYS    > matches  <A 507   LYS    > 
         E  <A 124   GLU    > matches  <A 380   GLU    > 
 
KERBm  3*FOUND in 1wa5  size =    3  ^    GTP-BINDING NUCLEAR PROTEIN RAN;                        #    1                            
  RMSD =     1.34 A
  TRANSFORM    0.8845 -0.0454 -0.4644  0.3209 -0.6634  0.6759  0.3388  0.7469  0.5722    12.891   -27.475   -13.264              
         T  <A  34   THR    > matches  <B 507   THR    > 
         K  <A  60   LYS    > matches  <B 503   LYS    > 
         E  <A 124   GLU    > matches  <C 621   GLU    > 
 
KERBm  3*FOUND in 1bgv  size =    3  ^    GLUTAMATE DEHYDROGENASE;                                #    2                            
  RMSD =     1.34 A
  TRANSFORM   -0.8498 -0.5067 -0.1453 -0.5240  0.8420  0.1280 -0.0575 -0.1849  0.9811    16.235   -29.519     3.394              
         T  <A  34   THR    > matches  <A 193   THR    >                        (  5.0 A from    OE2 GLU A 501  )
         K  <A  60   LYS    > matches  <A 195   LYS    >                        ( 10.2 A from    OE2 GLU A 501  )
         E  <A 124   GLU    > matches  <A 109   GLU    >                        (  9.9 A from    O   GLU A 501  )
 
KERBm  3*FOUND in 1ep3  size =    3  ^    DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT);          #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.2722  0.7167  0.6421  0.7515  0.5751 -0.3233  0.6009 -0.3945  0.6951   -97.852   -62.079    64.477              
         T  <A  34   THR    > matches  <B 140   THR    >                        ( 21.6 A from    O4  FAD B 502  )
         K  <A  60   LYS    > matches  <B 166   LYS    >                        ( 24.8 A from    O4  FAD B 502  )
         E  <A 124   GLU    > matches  <B 214   GLU    >                        ( 21.4 A from    C7M FAD B 502  )
 
KERBm  3*FOUND in 3b34  size =    3  ^    AMINOPEPTIDASE N;                                       #    2                            
  RMSD =     1.34 A
  TRANSFORM    0.6694  0.1133  0.7342  0.5016  0.6601 -0.5591  0.5480 -0.7425 -0.3851    69.618    19.615    35.170              
         T  <A  34   THR    > matches  <A 449   THR    >                        ( 12.1 A from   NA    NA A 952  )
         K  <A  60   LYS    > matches  <A 451   LYS    >                        (  9.5 A from   NA    NA A 952  )
         E  <A 124   GLU    > matches  <A 477   GLU    >                        ( -4.7 A from    O2  GOL A 977s )
 
KERBm  3*FOUND in 2buf  size =    3  ^    ACETYLGLUTAMATE KINASE;                                 #    1                            
  RMSD =     1.34 A
  TRANSFORM    0.5846  0.8092  0.0582  0.6862 -0.4549 -0.5676  0.4328 -0.3718  0.8212   -36.730    74.575    66.735              
         T  <A  34   THR    > matches  <A 247   THR    >                        ( 25.0 A from    OE1 NLG A1302  )
         K  <A  60   LYS    > matches  <A 226   LYS    >                        ( 30.3 A from    OE1 NLG A1302  )
         E  <A 124   GLU    > matches  <A 261   GLU    >                        ( 16.0 A from    C8  NLG A1302  )
 
KERBm  3*FOUND in 4h8n  size =    3  ^    CONJUGATED POLYKETONE REDUCTASE C2;                     #    3                            
  RMSD =     1.34 A
  TRANSFORM   -0.2342  0.9648  0.1197  0.9027  0.1700  0.3953 -0.3611 -0.2006  0.9107   -37.894   -44.240    10.924              
         T  <A  34   THR    > matches  <A  65   THR    >                        (  8.0 A from    O2D NDP A3001  )
         K  <A  60   LYS    > matches  <A  67   LYS    >                        ( 13.8 A from    O3D NDP A3001  )
         E  <A 124   GLU    > matches  <A 188   GLU    >                        (  7.8 A from    C4N NDP A3001  )
 
KERBm  3*FOUND in 5fr8  size =    3  ^    TONB-DEPENDENT SIDEROPHORE RECEPTOR;                    #    3                            
  RMSD =     1.34 A
  TRANSFORM    0.0789 -0.5580  0.8261  0.5861  0.6962  0.4144  0.8064 -0.4515 -0.3820   -45.766    -1.133    34.335              
         T  <A  34   THR    > matches  <A 507   THR    >                        ( 31.5 A from    C2  C8E A1731  )
         K  <A  60   LYS    > matches  <A 464   LYS    >                        ( 33.2 A from    C2  C8E A1731  )
         E  <A 124   GLU    > matches  <A 651   GLU    >                        ( 33.6 A from    C4  C8E A1731  )
 
KERBm  3*FOUND in 3sb4  size =    3  ^    HYPOTHETICAL LEUCINE RICH REPEAT PROTEIN;               #    1                            
  RMSD =     1.34 A
  TRANSFORM    0.3578 -0.8732  0.3309 -0.4309  0.1599  0.8881  0.8284  0.4604  0.3191     4.215   -27.108   -11.107              
         T  <A  34   THR    > matches  <A 122   THR    >                        (  9.5 A from    O2  GOL A 358  )
         K  <A  60   LYS    > matches  <A 120   LYS    >                        ( 14.3 A from    O2  GOL A 358  )
         E  <A 124   GLU    > matches  <A 230   GLU    >                        ( 10.9 A from    C1  GOL A 358  )
 
KERBm  3*FOUND in 5ms2  size =    3  ^    LEGIONELLA PNEUMOPHILA EFFECTOR PROTEIN RAVZ;           #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.1500 -0.6190 -0.7709 -0.9587  0.2815 -0.0395 -0.2415 -0.7332  0.6357    -3.131    -0.043    -4.940              
         T  <A  34   THR    > matches  <A 243   THR    > 
         K  <A  60   LYS    > matches  <A 241   LYS    > 
         E  <A 124   GLU    > matches  <A 255   GLU    > 
 
KERBm  3*FOUND in 4rqa  size =    3  ^    HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE;                 #    1                            
  RMSD =     1.34 A
  TRANSFORM    0.0244  0.8461  0.5325  0.9857  0.0686 -0.1541  0.1669 -0.5286  0.8323   -19.607   -22.476    14.017              
         T  <A  34   THR    > matches  <A 177   THR    >                        (  9.1 A from   CL  A CL A 205  )
         K  <A  60   LYS    > matches  <A  12   LYS    >                        ( 14.1 A from   CL  A CL A 205  )
         E  <A 124   GLU    > matches  <A 104   GLU    >                        (  7.5 A from    OXT ACT A 204  )
 
KERBm  3*FOUND in 3zid  size =    3  ^    TUBULIN/FTSZ, GTPASE;                                   #    1                            
  RMSD =     1.34 A
  TRANSFORM    0.9214  0.2575 -0.2909 -0.1415  0.9198  0.3660 -0.3619  0.2961 -0.8840    14.627    11.757    14.262              
         T  <A  34   THR    > matches  <A  50   THR    >                        (  6.7 A from    O3B GDP A 999  )
         K  <A  60   LYS    > matches  <A  74+  LYS    >                        (  8.6 A from    O3B GDP A 999  )
         E  <A 124   GLU    > matches  <A  98   GLU    >                        ( 23.0 A from    O1B GDP A 999  )
 
KERBm  3*FOUND in 5ulm  size =    3  ^    MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5;       #    2                            
  RMSD =     1.34 A
  TRANSFORM    0.3964 -0.8542 -0.3365 -0.6222 -0.5195  0.5857  0.6751  0.0228  0.7374    58.433    -3.238   -36.860              
         T  <A  34   THR    > matches  <A 550   THR    > 
         K  <A  60   LYS    > matches  <A 512   LYS    > 
         E  <A 124   GLU    > matches  <A 648   GLU    > 
 
KERBm  3*FOUND in 3zdb  size =    3  ^    PROTEIN XNI;                                            #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.4122  0.6342  0.6541  0.8228 -0.0492  0.5663 -0.3913 -0.7716  0.5015    17.305   -20.429    45.951              
         T  <A  34   THR    > matches  <A 126   THR    >                        (  9.7 A from   MG    MG A1253  )
         K  <A  60   LYS    > matches  <A 128   LYS    >                        ( 12.6 A from   MG    MG A1253  )
         E  <A 124   GLU    > matches  <A  76   GLU    >                        ( 18.7 A from   MG    MG A1255  )
 
KERBm  3*FOUND in 3h6q  size =    3  ^    MACROCYPIN 1A;                                          #    1                            
  RMSD =     1.34 A
  TRANSFORM   -0.5117  0.2855  0.8103 -0.7658 -0.5792 -0.2795 -0.3895  0.7636 -0.5150     8.363   -29.979    19.707              
         T  <A  34   THR    > matches  <A  39   THR    > 
         K  <A  60   LYS    > matches  <A  31   LYS    > 
         E  <A 124   GLU    > matches  <A  85   GLU    > 
 
KERBm  3*FOUND in 3c5v  size =    3  ^    PROTEIN PHOSPHATASE METHYLESTERASE 1;                   #    1                            
  RMSD =     1.34 A
  TRANSFORM    0.2407 -0.3208  0.9160 -0.9687 -0.1379  0.2062 -0.0602  0.9370  0.3440    -3.901    42.172    30.160              
         T  <A  34   THR    > matches  <A 294   THR    > 
         K  <A  60   LYS    > matches  <A 296   LYS    > 
         E  <A 124   GLU    > matches  <A 353   GLU    > 
 
KERBm  3*FOUND in 1rf6  size =    3  ^    5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE SYNTHASE;            #    1                            
  RMSD =     1.35 A
  TRANSFORM    0.8220 -0.3284 -0.4652 -0.5499 -0.6699 -0.4989  0.1478 -0.6659  0.7312    10.962   116.737    90.072              
         T  <A  34   THR    > matches  <A 126   THR    >                        ( 13.7 A from    O8  S3P A1429  )
         K  <A  60   LYS    > matches  <A 130   LYS    >                        ( 18.2 A from    O8  S3P A1429  )
         E  <A 124   GLU    > matches  <A 340   GLU    >                        ( -2.8 A from    C2  GPJ A1428s )
 
KERBm  3*FOUND in 4qfl  size =    3  ^    ABC TRANSPORTER PERIPLASMIC PEPTIDE-BINDING PROTEIN     #    1                            
  RMSD =     1.35 A
  TRANSFORM    0.9372  0.0772 -0.3403 -0.0695 -0.9143 -0.3990  0.3419 -0.3976  0.8515     7.297    -4.405    24.177              
         T  <A  34   THR    > matches  <A 252   THR    >                        ( 20.0 A from    O   PHE A 602  )
         K  <A  60   LYS    > matches  <A 256   LYS    >                        ( 20.5 A from    OXT PHE A 602  )
         E  <A 124   GLU    > matches  <A 394   GLU    >                        ( 19.9 A from    O   PHE A 602  )
 
KERBm  3*FOUND in 1qha  size =    3  ^    PROTEIN (HEXOKINASE);                                   #    2                            
  RMSD =     1.35 A
  TRANSFORM    0.4900  0.5961 -0.6360 -0.5345  0.7819  0.3210 -0.6886 -0.1826 -0.7017    53.091    -8.290    45.285              
         T  <A  34   THR    > matches  <A 863   THR    >                        ( -3.6 A from    O1P G6P A 921s )
         K  <A  60   LYS    > matches  <A 785   LYS    >                        (  7.9 A from    O1P G6P A 921  )
         E  <A 124   GLU    > matches  <A 708   GLU    >                        ( -2.9 A from    O3  GLC A 920s )
 
KERBm  3*FOUND in 3dmn  size =    3  ^    PUTATIVE DNA HELICASE;                                  #    2                            
  RMSD =     1.35 A
  TRANSFORM    0.4253  0.1243 -0.8965  0.9044 -0.0954  0.4158  0.0339  0.9876  0.1530   -13.032   -45.275   -46.261              
         T  <A  34   THR    > matches  <A 682   THR    >                        ( -4.3 A from    O   ACT A   5s )
         K  <A  60   LYS    > matches  <A 690+  LYS    >                        (  7.2 A from    O   ACT A   5  )
         E  <A 124   GLU    > matches  <A 637   GLU    >                        (  4.8 A from    O1  FMT A 770  )
 
KERBm  3*FOUND in 3wiu  size =    3  ^    TK-SUBTILISIN;                                          #    1                            
  RMSD =     1.35 A
  TRANSFORM    0.6101 -0.3064 -0.7307 -0.1793 -0.9517  0.2493  0.7718  0.0211  0.6356    28.129    17.024   -24.013              
         T  <A  34   THR    > matches  <A 135   THR    >                        ( 15.5 A from   CA    CA A1002  )
         K  <A  60   LYS    > matches  <A 139   LYS    >                        ( 19.7 A from   CA    CA A1002  )
         E  <A 124   GLU    > matches  <A 229   GLU    >                        ( -2.3 A from   CA    CA A1005s )
 
KERBm  3*FOUND in 2oi2  size =    3  ^    MEVALONATE KINASE;                                      #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.7899 -0.1367 -0.5978 -0.6113  0.0980  0.7853  0.0488 -0.9858  0.1610    79.867   -14.674    37.274              
         T  <A  34   THR    > matches  <A  39   THR    >                        ( 17.3 A from    O1B DP6 A 300  )
         K  <A  60   LYS    > matches  <A  41   LYS    >                        ( 21.5 A from    O1B DP6 A 300  )
         E  <A 124   GLU    > matches  <A 290   GLU    >                        ( 15.0 A from    O2A DP6 A 300  )
 
KERBm  3*FOUND in 3nf2  size =    3  ^    PUTATIVE POLYPRENYL SYNTHETASE;                         #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.1116 -0.2168 -0.9698 -0.8466  0.5318 -0.0214 -0.5204 -0.8187  0.2429    49.857   -22.599    31.322              
         T  <A  34   THR    > matches  <A 306   THR    >                        ( 19.4 A from    O4  SO4 A   3  )
         K  <A  60   LYS    > matches  <A 310   LYS    >                        ( 21.0 A from    O3  SO4 A   3  )
         E  <A 124   GLU    > matches  <A 331   GLU    >                        ( 14.4 A from    O3  SO4 A   5  )
 
KERBm  3*FOUND in 3ajf  size =    3  ^    NON-STRUCTURAL PROTEIN 3;                               #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.1719 -0.2870  0.9424 -0.9450  0.3184 -0.0754  0.2784  0.9035  0.3260   -10.940    19.999   -11.387              
         T  <A  34   THR    > matches  <A 103   THR    >                        ( 19.4 A from    O2  SO4 A   3  )
         K  <A  60   LYS    > matches  <A  31   LYS    >                        ( 23.2 A from    O2  SO4 A   3  )
         E  <A 124   GLU    > matches  <A  70   GLU    >                        (  6.2 A from    O1  SO4 A   3  )
 
KERBm  3*FOUND in 2weu  size =    3  ^    TRYPTOPHAN 5-HALOGENASE;                                #    2                            
  RMSD =     1.35 A
  TRANSFORM   -0.2484 -0.3902  0.8866  0.4908  0.7384  0.4625  0.8351 -0.5500 -0.0081    19.071     1.901    16.861              
         T  <A  34   THR    > matches  <A 270   THR    >                        (  7.7 A from    CZ3 TRP A1512  )
         K  <A  60   LYS    > matches  <A  75   LYS    >                        (  3.7 A from    CZ3 TRP A1512  )
         E  <A 124   GLU    > matches  <A 308   GLU    >                        ( 23.2 A from    CZ3 TRP A1512  )
 
KERBm  3*FOUND in 1xx1  size =    3  ^    SPHINGOMYELINASE I;                                     #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.8138  0.5810  0.0112 -0.3007 -0.4375  0.8475 -0.4973 -0.6863 -0.5307    53.471     3.502    22.659              
         T  <A  34   THR    > matches  <A  43   THR    >                        (  9.7 A from    O2  SO4 A5001  )
         K  <A  60   LYS    > matches  <A  38   LYS    >                        ( 10.8 A from    O2  SO4 A5001  )
         E  <A 124   GLU    > matches  <A  72   GLU    >                        ( 10.7 A from    O8  EPE A2001  )
 
KERBm  3*FOUND in 6d3a  size =    3  ^    POLY(ADP-RIBOSE) GLYCOHYDROLASE ARH3;                   #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.3579  0.6936  0.6252 -0.7343 -0.6227  0.2704 -0.5768  0.3623 -0.7321    -4.185     7.823    69.135              
         T  <A  34   THR    > matches  <A 122   THR    >                        (  8.6 A from    O2A AR6 A 401  )
         K  <A  60   LYS    > matches  <A 126   LYS    >                        ( 12.0 A from    O1A AR6 A 401  )
         E  <A 124   GLU    > matches  <A  41   GLU    >                        (  4.4 A from    HD1 AR6 A 401  )
 
KERBm  3*FOUND in 1ydx  size =    3  ^    TYPE I RESTRICTION ENZYME SPECIFICITY PROTEIN MG438     #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.1060  0.8969  0.4293  0.7068 -0.2357  0.6670 -0.6994 -0.3741  0.6090   -28.675     2.120    49.216              
         T  <A  34   THR    > matches  <A  90   THR    >                        ( 25.4 A from   CL    CL A 384  )
         K  <A  60   LYS    > matches  <A  25   LYS    >                        ( 27.6 A from   CL    CL A 384  )
         E  <A 124   GLU    > matches  <A 158   GLU    >                        ( 32.3 A from   CL    CL A 385  )
 
KERBm  3*FOUND in 4zmh  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.0104  0.1639  0.9864 -0.2312  0.9593 -0.1618  0.9728  0.2298 -0.0280   -89.742   -74.053   -32.182              
         T  <A  34   THR    > matches  <A 444   THR    >                        ( 12.9 A from   NA    NA A1004  )
         K  <A  60   LYS    > matches  <A 448   LYS    >                        ( 13.8 A from    HO1 GOL A1005  )
         E  <A 124   GLU    > matches  <A 216   GLU    >                        (  8.3 A from    O2  PO4 A1001  )
 
KERBm  3*FOUND in 1jmm  size =    3  ^    PROTEIN I/II V-REGION;                                  #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.0745 -0.4502 -0.8898 -0.9443  0.3186 -0.0822 -0.3205 -0.8342  0.4489    38.954    29.636    48.789              
         T  <A  34   THR    > matches  <A 631   THR    >                        ( 20.5 A from   NA    NA A3001  )
         K  <A  60   LYS    > matches  <A 629   LYS    >                        ( 24.7 A from   NA    NA A3001  )
         E  <A 124   GLU    > matches  <A 665   GLU    >                        ( 18.4 A from   NA    NA A3001  )
 
KERBm  3*FOUND in 4wkz  size =    3  ^    PUTATIVE CELLULOSE-BINDING PROTEIN;                     #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.4419  0.7771  0.4480 -0.5232 -0.6290  0.5749 -0.7286 -0.0196 -0.6846   -22.556    27.108    37.462              
         T  <A  34   THR    > matches  <B  87   THR    >                        ( 21.6 A from   CA    CA A 303  )
         K  <A  60   LYS    > matches  <B  81   LYS    >                        ( 21.1 A from   CA    CA A 303  )
         E  <A 124   GLU    > matches  <A 165   GLU    >                        (  9.7 A from    OXT ACT A 302  )
 
KERBm  3*FOUND in 1qsa  size =    3  ^    PROTEIN (SOLUBLE LYTIC TRANSGLYCOSYLASE SLT70);         #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.2688  0.9629  0.0220  0.8023  0.2112  0.5583 -0.5330 -0.1678  0.8293   -16.065   -33.695   -11.332              
         T  <A  34   THR    > matches  <A 607   THR    >                        ( -4.4 A from    O2  GOL A 904s )
         K  <A  60   LYS    > matches  <A 605   LYS    >                        (  8.3 A from    O2  GOL A 904  )
         E  <A 124   GLU    > matches  <A 577   GLU    >                        ( 12.2 A from    O3  GOL A 903  )
 
KERBm  3*FOUND in 5e9w  size =    3  ^    MRNA CAP GUANINE-N7 METHYLTRANSFERASE;                  #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.6964  0.3354  0.6345 -0.2995  0.6676 -0.6816  0.6521  0.6648  0.3644     2.905    28.631   -61.544              
         T  <A  34   THR    > matches  <A 259   THR    >                        (  9.2 A from    C2  SAH A 500  )
         K  <A  60   LYS    > matches  <A 234   LYS    >                        ( 14.4 A from    O2' SAH A 500  )
         E  <A 124   GLU    > matches  <A 292   GLU    >                        (  8.3 A from    N6  SAH A 500  )
 
KERBm  3*FOUND in 3cx5  size =    3  ^    CYTOCHROME B-C1 COMPLEX SUBUNIT 1, MITOCHONDRIAL;       #    2                            
  RMSD =     1.35 A
  TRANSFORM    0.0103  0.8874  0.4609  0.7991 -0.2844  0.5297 -0.6012 -0.3628  0.7120   -38.897   -61.571    10.679              
         T  <A  34   THR    > matches  <A 255   THR    >                        ( 29.9 A from    O2' CN5 C4033  )
         K  <A  60   LYS    > matches  <D 309   LYS    >                        ( 29.9 A from    O2' CN5 C4033  )
         E  <A 124   GLU    > matches  <A 248   GLU    >                        ( 15.5 A from    O14 6PH A4013  )
 
KERBm  3*FOUND in 1lkx  size =    3  ^    MYOSIN IE HEAVY CHAIN;                                  #    4                            
  RMSD =     1.35 A
  TRANSFORM   -0.8232  0.4815  0.3009  0.3185  0.8303 -0.4574  0.4701  0.2807  0.8368    87.985  -140.281   -69.144              
         T  <A  34   THR    > matches  <A 180   THR    >                        ( 16.5 A from    O2  VO4 A 792  )
         K  <A  60   LYS    > matches  <A 178   LYS    >                        ( 17.8 A from   MG    MG A 790  )
         E  <A 124   GLU    > matches  <A 560   GLU    >                        ( 28.4 A from    O4  VO4 A 792  )
 
KERBm  3*FOUND in 3a1c  size =    3  ^    PROBABLE COPPER-EXPORTING P-TYPE ATPASE A;              #    5                            
  RMSD =     1.35 A
  TRANSFORM    0.2123  0.0640  0.9751  0.7484 -0.6523 -0.1201 -0.6283 -0.7553  0.1864   -27.885   -47.800    64.838              
         T  <A  34   THR    > matches  <A 549   THR    >                        ( 14.6 A from    O2G ACP A 997  )
         K  <A  60   LYS    > matches  <A 431   LYS    >                        ( 17.1 A from    O2G ACP A 997  )
         E  <A 124   GLU    > matches  <A 446   GLU    >                        ( 18.5 A from    C2  ACP A 997  )
 
KERBm  3*FOUND in 2nut  size =    3  ^    PROTEIN TRANSPORT PROTEIN SEC23A;                       #    3                            
  RMSD =     1.35 A
  TRANSFORM    0.1181 -0.4888 -0.8644  0.8234 -0.4383  0.3603  0.5550  0.7543 -0.3507    91.679    47.100   -25.498              
         T  <A  34   THR    > matches  <A 391   THR    >                        ( 39.2 A from   ZN    ZN A 800  )
         K  <A  60   LYS    > matches  <A 399   LYS    >                        ( 35.9 A from   ZN    ZN A 800  )
         E  <A 124   GLU    > matches  <A 149   GLU    >                        ( 57.3 A from   ZN    ZN A 800  )
 
KERBm  3*FOUND in 4k1p  size =    3  ^    NHEA;                                                   #    1                            
  RMSD =     1.35 A
  TRANSFORM    0.4947 -0.5375 -0.6829  0.7368 -0.1574  0.6576  0.4609  0.8285 -0.3181     3.809   -44.576   -13.046              
         T  <A  34   THR    > matches  <A 117   THR    >                        ( 35.4 A from    O2  EDO A 401  )
         K  <A  60   LYS    > matches  <A 113   LYS    >                        ( 39.3 A from    O2  EDO A 401  )
         E  <A 124   GLU    > matches  <A 132   GLU    >                        ( 30.2 A from    C2  EDO A 401  )
 
KERBm  3*FOUND in 1iqp  size =    3  ^    RFCS;                                                   #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.2632  0.9376  0.2274 -0.4858 -0.3324  0.8084 -0.8335 -0.1023 -0.5429   -46.060   -83.977   142.981              
         T  <A  34   THR    > matches  <A 223   THR    >                        ( 23.8 A from    N3  ADP A 401  )
         K  <A  60   LYS    > matches  <A 221   LYS    >                        ( 27.1 A from    C2  ADP A 401  )
         E  <A 124   GLU    > matches  <A 279   GLU    >                        ( 23.1 A from    O4' ADP A 401  )
 
KERBm  3*FOUND in 1wp9  size =    3  ^    ATP-DEPENDENT RNA HELICASE, PUTATIVE;                   #    2                            
  RMSD =     1.35 A
  TRANSFORM   -0.8088  0.5750  0.1236  0.5374  0.6373  0.5523 -0.2388 -0.5131  0.8244    26.835  -119.859    36.869              
         T  <A  34   THR    > matches  <A 163   THR    >                        (  8.9 A from    O2  PO4 A 495  )
         K  <A  60   LYS    > matches  <A  36   LYS    >                        ( -3.3 A from    O2  PO4 A 495s )
         E  <A 124   GLU    > matches  <A 171   GLU    >                        ( 26.3 A from    O2  PO4 A 495  )
 
KERBm  3*FOUND in 4cid  size =    3  ^    EH DOMAIN-CONTAINING PROTEIN 2;                         #    2                            
  RMSD =     1.35 A
  TRANSFORM    0.3349 -0.6062 -0.7213  0.1359  0.7886 -0.5997 -0.9324 -0.1028 -0.3466   -21.291    22.574    21.510              
         T  <A  34   THR    > matches  <A  69   THR    >                        ( -5.1 A from    O1B ANP A1540s )
         K  <A  60   LYS    > matches  <A 220   LYS    >                        ( -3.3 A from    O4' ANP A1540s )
         E  <A 124   GLU    > matches  <A 202   GLU    >                        ( 18.5 A from    O1G ANP A1540  )
 
KERBm  3*FOUND in 4jeh  size =    3  ^    SYNTAXIN-BINDING PROTEIN 1;                             #    2                            
  RMSD =     1.35 A
  TRANSFORM   -0.6119 -0.7499  0.2515  0.2762  0.0953  0.9564  0.7411 -0.6547 -0.1488    43.110   -37.504    43.364              
         T  <A  34   THR    > matches  <A 361   THR    > 
         K  <A  60   LYS    > matches  <A 364   LYS    > 
         E  <A 124   GLU    > matches  <A 260   GLU    > 
 
KERBm  3*FOUND in 1kzy  size =    3  ^    CELLULAR TUMOR ANTIGEN P53;                             #    1                            
  RMSD =     1.35 A
  TRANSFORM    0.1274 -0.8951 -0.4273  0.7432 -0.1991  0.6387  0.6568  0.3990 -0.6399    77.101   -55.479    20.001              
         T  <A  34   THR    > matches  <C1737   THR    > 
         K  <A  60   LYS    > matches  <C1773   LYS    > 
         E  <A 124   GLU    > matches  <C1945   GLU    > 
 
KERBm  3*FOUND in 4lax  size =    3  ^    PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP4;              #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.3436 -0.6863 -0.6410 -0.5291 -0.4224  0.7359  0.7758 -0.5921  0.2180    92.339   -25.276     3.946              
         T  <A  34   THR    > matches  <A  44   THR    >                        ( 24.0 A from    O1  GOL A 305  )
         K  <A  60   LYS    > matches  <A  98   LYS    >                        ( 21.0 A from    C4  FK5 A 301  )
         E  <A 124   GLU    > matches  <A 175   GLU    >                        (  9.2 A from    O   DMS A 303  )
 
KERBm  3*FOUND in 3qq2  size =    3  ^    BRKA AUTOTRANSPORTER;                                   #    2                            
  RMSD =     1.35 A
  TRANSFORM    0.0685 -0.9706  0.2309  0.9176  0.1522  0.3673  0.3916 -0.1867 -0.9010     0.926   -27.947    38.503              
         T  <A  34   THR    > matches  <A 943   THR    > 
         K  <A  60   LYS    > matches  <A 966+  LYS    > 
         E  <A 124   GLU    > matches  <A 776   GLU    > 
 
KERBm  3*FOUND in 4lxj  size =    3  ^    LANOSTEROL 14-ALPHA DEMETHYLASE;                        #    1                            
  RMSD =     1.35 A
  TRANSFORM   -0.5678  0.0550 -0.8213 -0.7773  0.2926  0.5569 -0.2709 -0.9546  0.1234    66.444     3.374    54.076              
         T  <A  34   THR    > matches  <A 356   THR    >                        ( 20.4 A from    CMC HEM A 601  )
         K  <A  60   LYS    > matches  <A 164   LYS    >                        ( 18.3 A from    CBC HEM A 601  )
         E  <A 124   GLU    > matches  <A 342   GLU    >                        ( 25.8 A from    CBB HEM A 601  )
 
KERBm  3*FOUND in 4o1k  size =    3  ^    CARBONIC ANHYDRASE;                                     #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.1031  0.0038  0.9947 -0.9138 -0.3946  0.0962 -0.3929  0.9188  0.0372    -6.180   100.787    58.722              
         T  <A  34   THR    > matches  <A 123   THR    >                        ( 13.4 A from   ZN    ZN A 301  )
         K  <A  60   LYS    > matches  <A 125   LYS    >                        ( 14.9 A from   ZN    ZN A 301  )
         E  <A 124   GLU    > matches  <A 163   GLU    >                        ( 14.4 A from   ZN    ZN A 301  )
 
KERBm  3*FOUND in 1kk3  size =    3  ^    EIF2GAMMA;                                              #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.3915 -0.9168  0.0787  0.3281  0.0592 -0.9428 -0.8597 -0.3949 -0.3240    14.129    11.887    12.337              
         T  <A  34   THR    > matches  <A  24   THR    >                        (  3.0 A from   MG    MG A 413s )
         K  <A  60   LYS    > matches  <A  28   LYS    >                        (  6.9 A from    O2A GDP A 412  )
         E  <A 124   GLU    > matches  <A 127   GLU    >                        ( 15.0 A from    O2B GDP A 412  )
 
KERBm  3*FOUND in 4jgh  size =    3  ^    SUPPRESSOR OF CYTOKINE SIGNALING 2;                     #    1                            
  RMSD =     1.36 A
  TRANSFORM   -0.3131  0.7805 -0.5411 -0.9362 -0.3494  0.0377  0.1596 -0.5183 -0.8401   -91.896    27.079     6.373              
         T  <A  34   THR    > matches  <D 271   THR    > 
         K  <A  60   LYS    > matches  <D 274   LYS    > 
         E  <A 124   GLU    > matches  <D 203   GLU    > 
 
KERBm  3*FOUND in 5u55  size =    3  ^    (S)-2-HYDROXYPROPYLPHOSPHONIC ACID EPOXIDASE;           #    1                            
  RMSD =     1.36 A
  TRANSFORM   -0.3612 -0.5377 -0.7618  0.4856  0.5890 -0.6460 -0.7961  0.6033 -0.0484    20.501   -33.228     3.792              
         T  <A  34   THR    > matches  <A 100   THR    >                        ( 14.9 A from    O15 S0H A 302  )
         K  <A  60   LYS    > matches  <A  73   LYS    >                        ( 20.3 A from    O15 S0H A 302  )
         E  <A 124   GLU    > matches  <A  85   GLU    >                        (  5.9 A from    O15 S0H A 302  )
 
KERBm  3*FOUND in 4pjw  size =    3  ^    COHESIN SUBUNIT SA-2;                                   #    2                            
  RMSD =     1.36 A
  TRANSFORM   -0.4767  0.7535 -0.4527 -0.4532 -0.6519 -0.6079  0.7533  0.0846 -0.6523   -30.611   -20.591    30.309              
         T  <A  34   THR    > matches  <A 626   THR    >                        ( 61.3 A from    H22 MES A1101  )
         K  <A  60   LYS    > matches  <A 692   LYS    >                        ( 64.7 A from    H22 MES A1101  )
         E  <A 124   GLU    > matches  <B 365   GLU    >                        ( 50.1 A from    H22 MES A1101  )
 
KERBm  3*FOUND in 4j0m  size =    3  ^    SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1;            #    1                            
  RMSD =     1.36 A
  TRANSFORM   -0.8358 -0.3481 -0.4245 -0.2114  0.9177 -0.3364 -0.5066  0.1914  0.8406    12.208   -72.643    68.954              
         T  <A  34   THR    > matches  <A 323   THR    >                        ( 20.9 A from    O4  MAN A 810  )
         K  <A  60   LYS    > matches  <A 349   LYS    >                        ( 22.9 A from    O4  MAN A 810  )
         E  <A 124   GLU    > matches  <A 271   GLU    >                        ( 22.0 A from    C8  NAG A 813  )
 
KERBm  3*FOUND in 3a24  size =    3  ^    ALPHA-GALACTOSIDASE;                                    #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.5710 -0.4552 -0.6832 -0.3163  0.6461 -0.6947 -0.7576 -0.6127 -0.2249    83.051    70.519    90.032              
         T  <A  34   THR    > matches  <A  37   THR    >                        ( 43.6 A from   CA    CA A1268  )
         K  <A  60   LYS    > matches  <A  22+  LYS    >                        ( 45.5 A from    C2  MES A1267  )
         E  <A 124   GLU    > matches  <A 224   GLU    >                        ( 31.3 A from   CA    CA A1268  )
 
KERBm  3*FOUND in 4rsi  size =    3  ^    STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2;        #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.5997  0.3423  0.7233  0.7006 -0.6614 -0.2678 -0.3868 -0.6674  0.6364   -66.408     7.752    -5.290              
         T  <A  34   THR    > matches  <B 595   THR    >                        (104.9 A from    O4  PO4 A 801  )
         K  <A  60   LYS    > matches  <B 591   LYS    >                        (107.9 A from    O4  PO4 A 801  )
         E  <A 124   GLU    > matches  <B 609   GLU    >                        ( 88.4 A from    O4  PO4 A 801  )
 
KERBm  3*FOUND in 6eqs  size =    3  ^    NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHON     #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.6774  0.0280  0.7351 -0.6618  0.4594  0.5924  0.3211  0.8878 -0.3298    17.353     8.736   -13.555              
         T  <A  34   THR    > matches  <A 126   THR    >                        ( -2.9 A from    O   DMS A 411s )
         K  <A  60   LYS    > matches  <A 130   LYS    >                        (  7.2 A from    O   DMS A 411  )
         E  <A 124   GLU    > matches  <A  64   GLU    >                        ( -3.8 A from    N11ABV8 A 402s )
 
KERBm  3*FOUND in 6epg  size =    3  ^    EPSILON_1 ANTITOXIN;                                    #    1                            
  RMSD =     1.36 A
  TRANSFORM   -0.9536 -0.0056 -0.3009 -0.1248  0.9172  0.3784 -0.2739 -0.3985  0.8753    44.490   -41.133    13.564              
         T  <A  34   THR    > matches  <B 128   THR    >                        ( 18.6 A from    O3  SO4 B 501  )
         K  <A  60   LYS    > matches  <B 101   LYS    >                        ( 24.6 A from    O3  SO4 B 501  )
         E  <A 124   GLU    > matches  <A  20   GLU    >                        ( 19.5 A from    O3  SO4 B 501  )
 
KERBm  3*FOUND in 4zl4  size =    3  ^    ASPARTIC PROTEASE PM5;                                  #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.4778 -0.8634  0.1623 -0.5419 -0.1443  0.8279  0.6914  0.4835  0.5368   100.252   -33.352   -59.980              
         T  <A  34   THR    > matches  <A 443   THR    >                        (  9.7 A from    O21 4PK A 501  )
         K  <A  60   LYS    > matches  <A 446   LYS    >                        ( 13.7 A from    C09 4PK A 501  )
         E  <A 124   GLU    > matches  <A 323   GLU    >                        ( -5.0 A from    O4  SO4 A 502s )
 
KERBm  3*FOUND in 5w0m  size =    3  ^    TERMINAL URIDYLYLTRANSFERASE 7;                         #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.4306 -0.8340  0.3450  0.3111  0.4960  0.8107  0.8473  0.2418 -0.4730   -16.969     1.958    48.273              
         T  <A  34   THR    > matches  <A1174   THR    >                        ( -3.7 A from    I   IOD A1404s )
         K  <A  60   LYS    > matches  <A1152   LYS    >                        (  2.7 A from    O4  SO4 A1401s )
         E  <A 124   GLU    > matches  <A1194   GLU    >                        ( 21.9 A from    I   IOD A1404  )
 
KERBm  3*FOUND in 3ekg  size =    3  ^    MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME;         #    1                            
  RMSD =     1.36 A
  TRANSFORM   -0.2298  0.7219  0.6527 -0.3233 -0.6892  0.6485 -0.9180  0.0620 -0.3918    84.933    11.631    18.907              
         T  <A  34   THR    > matches  <A 301   THR    >                        ( 23.3 A from    O1  TLA A 501  )
         K  <A  60   LYS    > matches  <A 305   LYS    >                        ( 24.5 A from    O1  TLA A 501  )
         E  <A 124   GLU    > matches  <A  64   GLU    >                        ( 26.8 A from    O41 TLA A 501  )
 
KERBm  3*FOUND in 5wv9  size =    3  ^    CHITINASE;                                              #    2                            
  RMSD =     1.36 A
  TRANSFORM   -0.7819 -0.2879 -0.5529  0.4161  0.4194 -0.8068 -0.4642  0.8609  0.2082    17.747    18.631   -11.767              
         T  <A  34   THR    > matches  <A 169   THR    >                        ( 15.3 A from    C8  NAG A 503  )
         K  <A  60   LYS    > matches  <A 161   LYS    >                        ( 18.9 A from    C8  NAG A 503  )
         E  <A 124   GLU    > matches  <A 217   GLU    >                        (  3.3 A from    O7  NAG A 503s )
 
KERBm  3*FOUND in 6frl  size =    3  ^    TRYPTOPHAN HALOGENASE SUPERFAMILY;                      #    1                            
  RMSD =     1.36 A
  TRANSFORM   -0.9017 -0.2899 -0.3208  0.2077 -0.9411  0.2667  0.3792 -0.1738 -0.9088   100.086    26.208    37.368              
         T  <A  34   THR    > matches  <A 266   THR    >                        ( 16.3 A from    O11 TLA A 601  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        ( 15.9 A from    O11 TLA A 601  )
         E  <A 124   GLU    > matches  <A 304   GLU    >                        ( 25.5 A from    O11 TLA A 601  )
 
KERBm  3*FOUND in 3uz0  size =    3  ^    STAGE III SPORULATION PROTEIN AH;                       #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.8552  0.3189  0.4087  0.1948  0.5328 -0.8235  0.4804 -0.7839 -0.3935   -23.855    -3.741    76.597              
         T  <A  34   THR    > matches  <A 108   THR    >                        ( 25.7 A from    O2  SO4 A   1  )
         K  <A  60   LYS    > matches  <A 104+  LYS    >                        ( 23.4 A from    O2  SO4 A   1  )
         E  <A 124   GLU    > matches  <A 122   GLU    >                        ( 41.9 A from    O2  SO4 A   1  )
 
KERBm  3*FOUND in 2wnk  size =    3  ^    SPOROZOITE-SPECIFIC SAG PROTEIN;                        #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.7318  0.0565 -0.6792 -0.6238 -0.3459 -0.7009  0.2745 -0.9366  0.2179    68.545   -22.418    41.179              
         T  <A  34   THR    > matches  <A  16   THR    > 
         K  <A  60   LYS    > matches  <A 128   LYS    > 
         E  <A 124   GLU    > matches  <A   7   GLU    > 
 
KERBm  3*FOUND in 2bba  size =    3  ^    EPHRIN TYPE-B RECEPTOR 4;                               #    1                            
  RMSD =     1.36 A
  TRANSFORM   -0.0856 -0.3069  0.9479  0.4790 -0.8469 -0.2309 -0.8737 -0.4342 -0.2195   -12.057     5.018    59.202              
         T  <A  34   THR    > matches  <A 140   THR    >                        ( 19.0 A from    O3  SO4 A   2  )
         K  <A  60   LYS    > matches  <A 137   LYS    >                        ( 22.6 A from    O3  SO4 A   1  )
         E  <A 124   GLU    > matches  <A  96   GLU    >                        (  9.6 A from    O1  SO4 A   2  )
 
KERBm  3*FOUND in 4dwe  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.36 A
  TRANSFORM   -0.7744 -0.6073  0.1776  0.2950 -0.0981  0.9505  0.5598 -0.7884 -0.2551    32.830    -7.313    16.984              
         T  <A  34   THR    > matches  <A 246   THR    >                        ( 10.6 A from    O1  GOL A 502  )
         K  <A  60   LYS    > matches  <A 268   LYS    >                        ( 14.8 A from    O1  GOL A 502  )
         E  <A 124   GLU    > matches  <A 456   GLU    >                        ( 12.1 A from    C1  GOL A 502  )
 
KERBm  3*FOUND in 2hxv  size =    3  ^    DIAMINOHYDROXYPHOSPHORIBOSYLAMINOPYRIMIDINE DEAMINA     #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.7273 -0.1167  0.6763 -0.4464  0.6680  0.5954  0.5213  0.7350 -0.4337   -15.878   -10.089    -0.207              
         T  <A  34   THR    > matches  <A 141   THR    >                        (  7.6 A from    C1  GOL A 504  )
         K  <A  60   LYS    > matches  <A 145   LYS    >                        (  5.0 A from    O1  GOL A 504  )
         E  <A 124   GLU    > matches  <A 182   GLU    >                        (  5.3 A from    O3  GOL A 508  )
 
KERBm  3*FOUND in 3qk7  size =    3  ^    TRANSCRIPTIONAL REGULATORS;                             #    1                            
  RMSD =     1.36 A
  TRANSFORM    0.4248  0.1730 -0.8886 -0.7178  0.6625 -0.2142 -0.5517 -0.7288 -0.4056   141.252    -0.426   108.567              
         T  <A  34   THR    > matches  <A 134   THR    > 
         K  <A  60   LYS    > matches  <A 166   LYS    > 
         E  <A 124   GLU    > matches  <A  27   GLU    > 
 
KERBm  3*FOUND in 2vdf  size =    3  ^    OUTER MEMBRANE PROTEIN;                                 #    1                            
  RMSD =     1.37 A
  TRANSFORM    0.3801  0.3659  0.8495  0.3715  0.7807 -0.5025  0.8471 -0.5066 -0.1608    37.766   -18.082    -2.353              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 17.5 A from    C3  OCT A1254  )
         K  <A  60   LYS    > matches  <A 239   LYS    >                        ( 20.8 A from    C3  OCT A1254  )
         E  <A 124   GLU    > matches  <A  53   GLU    >                        ( 16.1 A from    C5  OCT A1254  )
 
KERBm  3*FOUND in 5w0n  size =    3  ^    TERMINAL URIDYLYLTRANSFERASE 7;                         #    1                            
  RMSD =     1.37 A
  TRANSFORM   -0.4254 -0.8325 -0.3549 -0.3232  0.5060 -0.7997 -0.8453  0.2255  0.4843    52.112   -78.846   -36.390              
         T  <A  34   THR    > matches  <A1174   THR    >                        (  6.1 A from    O2B 2KH A1402  )
         K  <A  60   LYS    > matches  <A1152   LYS    >                        ( -3.1 A from    O1G 2KH A1402s )
         E  <A 124   GLU    > matches  <A1194   GLU    >                        ( 20.1 A from    O2  2KH A1402  )
 
KERBm  3*FOUND in 3h6g  size =    3  ^    GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 2;               #    1                            
  RMSD =     1.37 A
  TRANSFORM    0.5431  0.8364 -0.0740  0.8251 -0.5479 -0.1378  0.1559 -0.0138  0.9877    48.323    82.914     4.683              
         T  <A  34   THR    > matches  <A  44   THR    >                        (  6.8 A from   CA    CA A 402  )
         K  <A  60   LYS    > matches  <A   2+  LYS    >                        (  9.6 A from    O7  NAG A 397  )
         E  <A 124   GLU    > matches  <A 268   GLU    >                        ( 15.1 A from    O6  NAG A 396  )
 
KERBm  3*FOUND in 3pih  size =    3  ^    UVRABC SYSTEM PROTEIN A;                                #    2                            
  RMSD =     1.37 A
  TRANSFORM   -0.7762  0.4920  0.3942 -0.6097 -0.4266 -0.6681  0.1606  0.7589 -0.6311     6.554    24.373    -0.732              
         T  <A  34   THR    > matches  <A 508   THR    >                        ( 18.1 A from    O11 PPV A1001  )
         K  <A  60   LYS    > matches  <A 511   LYS    >                        ( 21.8 A from    O11 PPV A1001  )
         E  <A 124   GLU    > matches  <A 834   GLU    >                        (  8.1 A from    O11 PPV A1001  )
 
KERBm  3*FOUND in 4wgx  size =    3  ^    MOLINATE HYDROLASE;                                     #    1                            
  RMSD =     1.37 A
  TRANSFORM    0.3365  0.6651  0.6666 -0.9188  0.3870  0.0778  0.2063  0.6387 -0.7413    44.553   -25.077    81.136              
         T  <A  34   THR    > matches  <A 113   THR    >                        (  4.4 A from    HO4 MPD A 502  )
         K  <A  60   LYS    > matches  <A 209   LYS    >                        ( -2.7 A from    HO4 MPD A 502s )
         E  <A 124   GLU    > matches  <A  97   GLU    >                        ( 17.9 A from    H12 MPD A 502  )
 
KERBm  3*FOUND in 1eu1  size =    3  ^    DIMETHYL SULFOXIDE REDUCTASE;                           #    1                            
  RMSD =     1.37 A
  TRANSFORM    0.4789  0.8370  0.2647  0.8622 -0.3918 -0.3210  0.1650 -0.3820  0.9093   -25.423    -7.970   -19.418              
         T  <A  34   THR    > matches  <A 215   THR    >                        ( 20.5 A from    O3'AMGD A1002  )
         K  <A  60   LYS    > matches  <A 213   LYS    >                        ( 25.7 A from    O2ABMGD A1002  )
         E  <A 124   GLU    > matches  <A 306   GLU    >                        ( 19.9 A from    N2  MGD A1002  )
 
KERBm  3*FOUND in 2nnu  size =    3  ^    REGULATORY PROTEIN E2;                                  #    1                            
  RMSD =     1.37 A
  TRANSFORM   -0.7881  0.2111  0.5782  0.4625 -0.4168  0.7826 -0.4062 -0.8842 -0.2308    27.679   -23.159    36.967              
         T  <A  34   THR    > matches  <A  93   THR    > 
         K  <A  60   LYS    > matches  <A  91   LYS    > 
         E  <A 124   GLU    > matches  <A  39   GLU    > 
 
KERBm  3*FOUND in 1rld  size =    3  ^    RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (LA     #    1                            
  RMSD =     1.37 A
  TRANSFORM   -0.6498  0.7258 -0.2257  0.5925  0.2976 -0.7486  0.4762  0.6201  0.6235    47.806   -41.002    33.964              
         T  <A  34   THR    > matches  <A 173   THR    > 
         K  <A  60   LYS    > matches  <A 201   LYS    >                        (  0.0 A from   site CAT        )
         E  <A 124   GLU    > matches  <A 464   GLU    > 
 
KERBm  3*FOUND in 1xpp  size =    3  ^    DNA-DIRECTED RNA POLYMERASE SUBUNIT L;                  #    1                            
  RMSD =     1.37 A
  TRANSFORM   -0.4687  0.2139 -0.8570 -0.6962  0.5077  0.5075 -0.5437 -0.8346  0.0890    34.033    -6.189   104.530              
         T  <A  34   THR    > matches  <A  92   THR    >                        ( 42.5 A from    N   SCN A 603  )
         K  <A  60   LYS    > matches  <A  96   LYS    >                        ( 48.4 A from    N   SCN A 603  )
         E  <A 124   GLU    > matches  <A  39   GLU    >                        ( 29.6 A from    N   SCN A 603  )
 
KERBm  3*FOUND in 4k2m  size =    3  ^    NTD BIOSYNTHESIS OPERON PROTEIN NTDA;                   #    1                            
  RMSD =     1.37 A
  TRANSFORM    0.8516  0.2510  0.4603 -0.2661 -0.5494  0.7920 -0.4517  0.7969  0.4011    28.465    -7.390    15.983              
         T  <A  34   THR    > matches  <A 357   THR    >                        ( 11.3 A from    C1  EDO A 505  )
         K  <A  60   LYS    > matches  <A 405   LYS    >                        ( 12.4 A from    C2  EDO A 505  )
         E  <A 124   GLU    > matches  <A 369   GLU    >                        ( 18.6 A from    O2  EDO A 503  )
 
KERBm  3*FOUND in 2q1z  size =    3  ^    RPOE, ECF SIGE;                                         #    1                            
  RMSD =     1.37 A
  TRANSFORM   -0.3255 -0.9403 -0.0998 -0.4440  0.0588  0.8941  0.8348 -0.3354  0.4366    76.362  -131.504   -52.451              
         T  <A  34   THR    > matches  <B 121   THR    >                        ( 17.1 A from   ZN  A ZN B 197  )
         K  <A  60   LYS    > matches  <A  94   LYS    >                        ( 22.5 A from   ZN  A ZN B 197  )
         E  <A 124   GLU    > matches  <B 169   GLU    >                        (  5.6 A from   ZN  A ZN B 197  )
 
KERBm  3*FOUND in 3rgz  size =    3  ^    PROTEIN BRASSINOSTEROID INSENSITIVE 1;                  #    1                            
  RMSD =     1.37 A
  TRANSFORM   -0.5141  0.8498 -0.1163  0.8418  0.5259  0.1219 -0.1648  0.0352  0.9857    43.521    17.788    -7.685              
         T  <A  34   THR    > matches  <A 360   THR    >                        ( 18.0 A from    C6  NAG A3511  )
         K  <A  60   LYS    > matches  <A 363   LYS    >                        ( 23.2 A from    C6  NAG A3511  )
         E  <A 124   GLU    > matches  <A 376   GLU    >                        ( -3.5 A from    C1  NAG A3511s )
 
KERBm  3*FOUND in 6eop  size =    3  ^    DIPEPTIDYL PEPTIDASE 8;                                 #    1                            
  RMSD =     1.37 A
  TRANSFORM    0.1488  0.9803  0.1297 -0.9711  0.1201  0.2062 -0.1865  0.1566 -0.9699   -41.852   -11.914   301.962              
         T  <A  34   THR    > matches  <A 342   THR    >                        ( 23.4 A from   CA    CA A 902  )
         K  <A  60   LYS    > matches  <A 344   LYS    >                        ( 24.9 A from    OG2 FLC A 901  )
         E  <A 124   GLU    > matches  <A 793   GLU    >                        ( 17.9 A from   CA    CA A 902  )
 
KERBm  3*FOUND in 4i0w  size =    3  ^    PROTEASE CSPB;                                          #    2                            
  RMSD =     1.37 A
  TRANSFORM    0.5144 -0.1377  0.8464  0.5075  0.8445 -0.1711  0.6912 -0.5176 -0.5043   -46.651   -91.649    -2.612              
         T  <A  34   THR    > matches  <B 419   THR    >                        ( 13.5 A from   NA    NA B 603  )
         K  <A  60   LYS    > matches  <B 416+  LYS    >                        ( 11.4 A from   NA    NA B 603  )
         E  <A 124   GLU    > matches  <B 331   GLU    >                        ( 15.1 A from    C2  EDO B 606  )
 
KERBm  3*FOUND in 1cip  size =    3  ^    PROTEIN (GUANINE NUCLEOTIDE-BINDING PROTEIN             #    1                            
  RMSD =     1.37 A
  TRANSFORM   -0.9444  0.2873 -0.1598  0.2509  0.3162 -0.9149  0.2123  0.9042  0.3707    63.123    -7.624    32.775              
         T  <A  34   THR    > matches  <A  48   THR    >                        ( -3.7 A from    C8  GNP A 355s )
         K  <A  60   LYS    > matches  <A  51   LYS    >                        (  5.7 A from    O2A GNP A 355  )
         E  <A 124   GLU    > matches  <A 276   GLU    >                        ( 11.9 A from    N2  GNP A 355  )
 
KERBm  3*FOUND in 3txa  size =    3  ^    CELL WALL SURFACE ANCHOR FAMILY PROTEIN;                #    1                            
  RMSD =     1.37 A
  TRANSFORM    0.7901 -0.3740  0.4857 -0.4937 -0.8579  0.1425 -0.3634  0.3523  0.8625   -40.274     4.356    16.998              
         T  <A  34   THR    > matches  <A 582   THR    >                        ( 18.0 A from   CD    CD A 802  )
         K  <A  60   LYS    > matches  <A 216   LYS    >                        ( 14.7 A from   CD    CD A 802  )
         E  <A 124   GLU    > matches  <A 550   GLU    >                        ( 18.2 A from   MG    MG A 801  )
 
KERBm  3*FOUND in 1qqh  size =    3  ^    PAPILLOMAVIRUS TRANSCRIPTION FACTOR E2;                 #    1                            
  RMSD =     1.37 A
  TRANSFORM   -0.8845 -0.0544  0.4634  0.3288  0.6321  0.7017  0.3311 -0.7730  0.5412    49.128   -68.756     2.460              
         T  <A  34   THR    > matches  <A 167   THR    > 
         K  <A  60   LYS    > matches  <A 162   LYS    > 
         E  <A 124   GLU    > matches  <A 177   GLU    > 
 
KERBm  3*FOUND in 5j9u  size =    3  ^    HISTONE ACETYLTRANSFERASE ESA1;                         #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.2419  0.9699 -0.0267  0.9703 -0.2415  0.0168 -0.0099  0.0299  0.9995   -41.376    17.845   -33.088              
         T  <A  34   THR    > matches  <C 223   THR    > 
         K  <A  60   LYS    > matches  <C 226   LYS    > 
         E  <A 124   GLU    > matches  <C 281   GLU    > 
 
KERBm  3*FOUND in 3lpp  size =    3  ^    SUCRASE-ISOMALTASE;                                     #    1                            
  RMSD =     1.38 A
  TRANSFORM   -0.7184  0.2418 -0.6522 -0.6653 -0.5124  0.5430  0.2029 -0.8240 -0.5289    74.505     9.325    53.028              
         T  <A  34   THR    > matches  <A 668   THR    >                        (  0.8 A from    CB  THR A 668  )
         K  <A  60   LYS    > matches  <A 672   LYS    >                        (  0.0 A from    NZ  LYS A 672  )
         E  <A 124   GLU    > matches  <A 768   GLU    >                        (  0.5 A from    CD  GLU A 768  )
 
KERBm  3*FOUND in 3hlz  size =    3  ^    UNCHARACTERIZED PROTEIN BT_1490;                        #    2                            
  RMSD =     1.38 A
  TRANSFORM   -0.2974  0.6917  0.6582  0.0839 -0.6678  0.7396 -0.9511 -0.2751 -0.1406   -12.794    38.233    63.668              
         T  <A  34   THR    > matches  <A  76   THR    >                        ( 22.2 A from    O3  GOL A 270  )
         K  <A  60   LYS    > matches  <A  73   LYS    >                        ( 21.9 A from    O3  GOL A 270  )
         E  <A 124   GLU    > matches  <A 141   GLU    >                        ( 16.5 A from    O2  GOL A 269  )
 
KERBm  3*FOUND in 4wz9  size =    3  ^    AGAP004809-PA;                                          #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.1335 -0.9693 -0.2066 -0.8081  0.0142 -0.5889 -0.5737 -0.2455  0.7814     4.965    25.392    16.696              
         T  <A  34   THR    > matches  <A 712   THR    >                        ( 13.1 A from    C1  GOL A1002  )
         K  <A  60   LYS    > matches  <A 746   LYS    >                        ( 11.5 A from    O1  GOL A1002  )
         E  <A 124   GLU    > matches  <A 408   GLU    >                        ( 25.6 A from   ZN    ZN A1001  )
 
KERBm  3*FOUND in 3fvz  size =    3  ^    PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE;         #    1                            
  RMSD =     1.38 A
  TRANSFORM   -0.2645 -0.9473  0.1809 -0.1827 -0.1349 -0.9739 -0.9469  0.2907  0.1374    73.978    22.038    29.458              
         T  <A  34   THR    > matches  <A 716   THR    >                        ( 17.3 A from   CA    CA A 823  )
         K  <A  60   LYS    > matches  <A 719   LYS    >                        ( 19.2 A from    C1  GOL A 824  )
         E  <A 124   GLU    > matches  <A 792   GLU    >                        ( -3.6 A from    O3  GOL A   2s )
 
KERBm  3*FOUND in 4e9k  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.1898 -0.9818  0.0008  0.8554  0.1658  0.4906  0.4819  0.0925 -0.8714   109.314   -79.253    42.094              
         T  <A  34   THR    > matches  <A 194   THR    >                        (  8.7 A from    O3  SO4 A 301  )
         K  <A  60   LYS    > matches  <A 192   LYS    >                        (  9.8 A from    O3  SO4 A 301  )
         E  <A 124   GLU    > matches  <A 228   GLU    >                        (  9.5 A from    O3  SO4 A 303  )
 
KERBm  3*FOUND in 1vq0  size =    3  ^    33 KDA CHAPERONIN;                                      #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.1902 -0.6818 -0.7064  0.9464  0.3187 -0.0528 -0.2611  0.6585 -0.7058    59.823   -17.141    40.870              
         T  <A  34   THR    > matches  <A  82   THR    >                        (  8.3 A from    O13 UNL A 302  )
         K  <A  60   LYS    > matches  <A 230   LYS    >                        (  6.4 A from    O13 UNL A 302  )
         E  <A 124   GLU    > matches  <A 148   GLU    >                        ( -2.7 A from    O1  EDO A 303s )
 
KERBm  3*FOUND in 6cr0  size =    3  ^    (S)-6-HYDROXYNICOTINE OXIDASE;                          #    3                            
  RMSD =     1.38 A
  TRANSFORM    0.0755 -0.8933 -0.4430  0.0782  0.4482 -0.8905 -0.9941 -0.0326 -0.1037   115.178    21.941   123.751              
         T  <A  34   THR    > matches  <A 333   THR    >                        (  4.5 A from    C5  MPD A 505  )
         K  <A  60   LYS    > matches  <A 331   LYS    >                        (  5.1 A from    O   ACT A 506  )
         E  <A 124   GLU    > matches  <A 177   GLU    >                        ( 18.0 A from    C3  MPD A 505  )
 
KERBm  3*FOUND in 6elm  size =    3  ^    SERINE/THREONINE-PROTEIN KINASE WNK2;                   #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.8411  0.3372 -0.4228 -0.2244  0.9289  0.2944 -0.4920  0.1528 -0.8571     5.869    -2.849    -5.158              
         T  <A  34   THR    > matches  <A 473   THR    > 
         K  <A  60   LYS    > matches  <A 471   LYS    > 
         E  <A 124   GLU    > matches  <A 516   GLU    > 
 
KERBm  3*FOUND in 4d0g  size =    3  ^    RAS-RELATED PROTEIN RAB-14;                             #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.8203  0.5504 -0.1557  0.5707 -0.8058  0.1583  0.0384  0.2187  0.9750    85.217   -17.370    46.091              
         T  <A  34   THR    > matches  <C 606   THR    > 
         K  <A  60   LYS    > matches  <C 610   LYS    > 
         E  <A 124   GLU    > matches  <C 595   GLU    > 
 
KERBm  3*FOUND in 5ifp  size =    3  ^    BETA-GALACTOSIDASE A;                                   #    1                            
  RMSD =     1.38 A
  TRANSFORM   -0.4573 -0.2822 -0.8434  0.8360 -0.4597 -0.2995  0.3032  0.8420 -0.4462   -25.493   -45.351    21.275              
         T  <A  34   THR    > matches  <A 493   THR    >                        ( 14.0 A from    O6  NAG A1478  )
         K  <A  60   LYS    > matches  <A 495   LYS    >                        ( 11.0 A from    O6  NAG A1478  )
         E  <A 124   GLU    > matches  <A 377   GLU    >                        ( -2.7 A from    O2  MAN A1625s )
 
KERBm  3*FOUND in 3ryp  size =    3  ^    CATABOLITE GENE ACTIVATOR;                              #    3                            
  RMSD =     1.38 A
  TRANSFORM   -0.6970  0.6093 -0.3780 -0.2515 -0.7014 -0.6669  0.6715  0.3698 -0.6422    32.403    63.418   -10.319              
         T  <A  34   THR    > matches  <A 168   THR    >                        ( 12.9 A from    O2  GOL A 211  )
         K  <A  60   LYS    > matches  <A 201   LYS    >                        ( 17.4 A from    O2  GOL A 211  )
         E  <A 124   GLU    > matches  <A  55   GLU    >                        ( 17.6 A from    O3  GOL A 210  )
 
KERBm  3*FOUND in 1x82  size =    3  ^    GLUCOSE-6-PHOSPHATE ISOMERASE;                          #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.5981  0.4846  0.6383 -0.6328  0.7743  0.0051  0.4917  0.4070 -0.7698    -0.562    -7.253    24.842              
         T  <A  34   THR    > matches  <A 162   THR    >                        ( 12.6 A from    O2P PA5 A 301  )
         K  <A  60   LYS    > matches  <A 166   LYS    >                        ( 16.0 A from    O2P PA5 A 301  )
         E  <A 124   GLU    > matches  <A  58   GLU    >                        (  7.7 A from    O2  PA5 A 301  )
 
KERBm  3*FOUND in 2wb7  size =    3  ^    PT26-6P;                                                #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.6640  0.4008 -0.6312 -0.2333 -0.6910 -0.6842  0.7104 -0.6016  0.3653     6.159   144.694   -26.016              
         T  <A  34   THR    > matches  <A 236   THR    > 
         K  <A  60   LYS    > matches  <A 315   LYS    > 
         E  <A 124   GLU    > matches  <A 509   GLU    > 
 
KERBm  3*FOUND in 6g3e  size =    3  ^    ARGININOSUCCINATE LYASE;                                #    1                            
  RMSD =     1.38 A
  TRANSFORM   -0.8250  0.2457 -0.5090 -0.3701  0.4458  0.8150 -0.4272 -0.8607  0.2768    59.337    -9.077    71.639              
         T  <A  34   THR    > matches  <A 152   THR    >                        ( 26.8 A from   NA    NA A 604  )
         K  <A  60   LYS    > matches  <A 353   LYS    >                        ( 29.5 A from    O2  FMT A 602  )
         E  <A 124   GLU    > matches  <A 177   GLU    >                        (  9.5 A from   NA    NA A 604  )
 
KERBm  3*FOUND in 4pxy  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    3                            
  RMSD =     1.38 A
  TRANSFORM    0.8482  0.5199  0.1015  0.4751 -0.8314  0.2882 -0.2342  0.1962  0.9522     5.563   -31.384   -20.670              
         T  <A  34   THR    > matches  <A  57   THR    >                        (  7.5 A from    O1  EDO A 313  )
         K  <A  60   LYS    > matches  <A  61   LYS    >                        ( 13.1 A from   ZN    ZN A 306  )
         E  <A 124   GLU    > matches  <A  45   GLU    >                        (  4.5 A from   ZN    ZN A 302  )
 
KERBm  3*FOUND in 3piw  size =    3  ^    TYPE I INTERFERON 2;                                    #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.0411  0.1785 -0.9831 -0.2850  0.9451  0.1597 -0.9577 -0.2736 -0.0897    16.721   -17.291    41.139              
         T  <A  34   THR    > matches  <A  15   THR    > 
         K  <A  60   LYS    > matches  <A  11   LYS    > 
         E  <A 124   GLU    > matches  <A 143   GLU    > 
 
KERBm  3*FOUND in 4bxh  size =    3  ^    C4 PHOSPHOENOLPYRUVATE CARBOXYLASE;                     #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.6483  0.1378  0.7488  0.4277  0.7478 -0.5078  0.6299 -0.6495 -0.4258  -123.112   -27.647    16.321              
         T  <A  34   THR    > matches  <A 965   THR    >                        ( -6.0 A from    O2  EDO A1003s )
         K  <A  60   LYS    > matches  <A 829   LYS    >                        (  6.6 A from    O1  EDO A1003  )
         E  <A 124   GLU    > matches  <A 560   GLU    >                        (  7.3 A from    C2  EDO A1002  )
 
KERBm  3*FOUND in 4qc6  size =    3  ^    BIFUNCTIONAL AAC/APH;                                   #    1                            
  RMSD =     1.38 A
  TRANSFORM   -0.8742 -0.4410 -0.2034 -0.4300  0.5082  0.7463  0.2257 -0.7398  0.6338    17.608   -16.921     3.605              
         T  <A  34   THR    > matches  <A  12   THR    >                        ( 13.1 A from    O15 KAN A 201  )
         K  <A  60   LYS    > matches  <A   1+  LYS    >                        ( 16.7 A from    O15 KAN A 201  )
         E  <A 124   GLU    > matches  <A  44   GLU    >                        ( 15.1 A from    O14 KAN A 201  )
 
KERBm  3*FOUND in 1gqe  size =    3  ^    RELEASE FACTOR 2;                                       #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.1654 -0.3943 -0.9040 -0.9292 -0.3696 -0.0088  0.3306 -0.8414  0.4275    47.511    10.488    48.997              
         T  <A  34   THR    > matches  <A  69   THR    > 
         K  <A  60   LYS    > matches  <A 109   LYS    > 
         E  <A 124   GLU    > matches  <A  36   GLU    > 
 
KERBm  3*FOUND in 2rji  size =    3  ^    ERYTHROCYTE BINDING ANTIGEN 175;                        #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.5428 -0.7893  0.2872 -0.6955 -0.2308  0.6804  0.4707  0.5691  0.6742    15.329   -22.263   -38.950              
         T  <A  34   THR    > matches  <A   5   THR    >                        ( 22.9 A from   CA    CA A  85  )
         K  <A  60   LYS    > matches  <A   1+  LYS    >                        ( 26.4 A from   CA    CA A  85  )
         E  <A 124   GLU    > matches  <A  19   GLU    >                        ( 14.8 A from   CA    CA A  85  )
 
KERBm  3*FOUND in 1l8q  size =    3  ^    CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA;         #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.8596 -0.4798  0.1759  0.4727  0.8773  0.0830  0.1941 -0.0118 -0.9809    25.606  -102.693    35.994              
         T  <A  34   THR    > matches  <A 123   THR    >                        ( -4.6 A from    O2B ADP A 400s )
         K  <A  60   LYS    > matches  <A 125   LYS    >                        ( -2.7 A from    O2B ADP A 400s )
         E  <A 124   GLU    > matches  <A 271   GLU    >                        ( 19.7 A from    O4' ADP A 400  )
 
KERBm  3*FOUND in 1nu7  size =    3  ^    THROMBIN LIGHT CHAIN;                                   #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.9896  0.1097  0.0929 -0.0520 -0.3297  0.9427 -0.1340  0.9377  0.3206   -30.784   -41.907   -39.053              
         T  <A  34   THR    > matches  <D   3   THR    >                        ( 20.0 A from   HG    HG D1003  )
         K  <A  60   LYS    > matches  <D   0+  LYS    >                        ( 22.9 A from   HG    HG D1003  )
         E  <A 124   GLU    > matches  <D   9   GLU    >                        ( 25.1 A from   HG    HG D1004  )
 
KERBm  3*FOUND in 5wx1  size =    3  ^    SERINE PROTEASE NS3;                                    #    3                            
  RMSD =     1.38 A
  TRANSFORM   -0.6169 -0.3058 -0.7252  0.7832 -0.1475 -0.6040 -0.0778  0.9406 -0.3305   134.022   -54.645   -47.040              
         T  <A  34   THR    > matches  <A 414   THR    > 
         K  <A  60   LYS    > matches  <A 417   LYS    > 
         E  <A 124   GLU    > matches  <A 499   GLU    > 
 
KERBm  3*FOUND in 3i4p  size =    3  ^    TRANSCRIPTIONAL REGULATOR, ASNC FAMILY;                 #    1                            
  RMSD =     1.38 A
  TRANSFORM   -0.9518 -0.3017 -0.0544 -0.2429  0.8504 -0.4668 -0.1871  0.4311  0.8827    33.147   -36.022     2.578              
         T  <A  34   THR    > matches  <A 144   THR    >                        ( 15.7 A from   CL    CL A 165  )
         K  <A  60   LYS    > matches  <A 142   LYS    >                        ( 20.1 A from   CL    CL A 165  )
         E  <A 124   GLU    > matches  <A  42   GLU    >                        (  9.8 A from   CL    CL A 166  )
 
KERBm  3*FOUND in 4yhc  size =    3  ^    STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-     #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.3828  0.9237  0.0173 -0.9142  0.3814 -0.1373  0.1334 -0.0367 -0.9904   -11.067    -5.657   123.366              
         T  <A  34   THR    > matches  <A 832   THR    >                        ( 25.5 A from    O1  CIT A1101  )
         K  <A  60   LYS    > matches  <A 829   LYS    >                        ( 31.0 A from    O1  CIT A1101  )
         E  <A 124   GLU    > matches  <A 605   GLU    >                        ( 14.8 A from    O5  CIT A1101  )
 
KERBm  3*FOUND in 1e7u  size =    3  ^    PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT;        #    1                            
  RMSD =     1.38 A
  TRANSFORM   -0.2605  0.8848  0.3863 -0.1247 -0.4276  0.8953 -0.9574 -0.1850 -0.2217   -43.360    -4.026    60.205              
         T  <A  34   THR    > matches  <A 887   THR    >                        (  5.7 A from    C24 KWT A1833  )
         K  <A  60   LYS    > matches  <A 890   LYS    >                        (  5.4 A from    C22 KWT A1833  )
         E  <A 124   GLU    > matches  <A 852   GLU    >                        ( 14.0 A from    C17 KWT A1833  )
 
KERBm  3*FOUND in 2w96  size =    3  ^    CELL DIVISION PROTEIN KINASE 4;                         #    1                            
  RMSD =     1.38 A
  TRANSFORM    0.6814  0.3148  0.6608 -0.7316  0.2660  0.6277 -0.0218  0.9111 -0.4116   -19.287   -24.277    29.705              
         T  <A  34   THR    > matches  <A 191   THR    >                        ( 21.1 A from    O1  GOL A1266  )
         K  <A  60   LYS    > matches  <A  58   LYS    >                        ( 24.4 A from    O1  GOL A1266  )
         E  <A 124   GLU    > matches  <A 162   GLU    >                        ( 24.8 A from    O2  GOL A1266  )
 
KERBm  3*FOUND in 5mph  size =    3  ^    GRAINYHEAD-LIKE PROTEIN 1 HOMOLOG;                      #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.3144 -0.6626  0.6798  0.6669 -0.6638 -0.3386 -0.6756 -0.3469 -0.6506    18.401   -52.966    23.769              
         T  <A  34   THR    > matches  <A 283   THR    >                        ( 16.7 A from    I   IOD A 502  )
         K  <A  60   LYS    > matches  <A 285   LYS    >                        ( 18.7 A from    I   IOD A 502  )
         E  <A 124   GLU    > matches  <A 426   GLU    >                        ( 20.5 A from    I   IOD A 502  )
 
KERBm  3*FOUND in 2a6h  size =    3  ^    DNA-DIRECTED RNA POLYMERASE ALPHA CHAIN;                #   15                            
  RMSD =     1.39 A
  TRANSFORM    0.9227 -0.3207 -0.2142  0.3054  0.9468 -0.1019 -0.2355 -0.0286 -0.9715    85.705  -203.945    -0.696              
         T  <A  34   THR    > matches  <F 346   THR    >                        ( 27.3 A from   ZN    ZN D7458  )
         K  <A  60   LYS    > matches  <D 671   LYS    >                        ( 32.6 A from   ZN    ZN D7458  )
         E  <A 124   GLU    > matches  <D  57   GLU    >                        (  9.5 A from   ZN    ZN D7458  )
 
KERBm  3*FOUND in 2i2c  size =    3  ^    PROBABLE INORGANIC POLYPHOSPHATE/ATP-NAD KINASE 1;      #    2                            
  RMSD =     1.39 A
  TRANSFORM    0.0139 -0.3236 -0.9461 -0.6127  0.7450 -0.2638 -0.7902 -0.5833  0.1879    24.358   -12.105    37.480              
         T  <A  34   THR    > matches  <A 125   THR    >                        (  7.3 A from    C82 DTA A 273  )
         K  <A  60   LYS    > matches  <A 127   LYS    >                        (  6.5 A from    N72 DTA A 273  )
         E  <A 124   GLU    > matches  <A  57   GLU    >                        ( 16.2 A from    C4  PG4 A 301  )
 
KERBm  3*FOUND in 6cgm  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE;                   #    3                            
  RMSD =     1.39 A
  TRANSFORM    0.0916  0.6192 -0.7798 -0.3651 -0.7077 -0.6049  0.9265 -0.3401 -0.1612    48.939    17.467   -25.420              
         T  <A  34   THR    > matches  <A 555   THR    >                        ( 36.1 A from    O1  EDO A 803  )
         K  <A  60   LYS    > matches  <A 559   LYS    >                        ( 40.1 A from    O1  EDO A 803  )
         E  <A 124   GLU    > matches  <A 548   GLU    >                        ( 25.4 A from    O1  EDO A 802  )
 
KERBm  3*FOUND in 3s9d  size =    3  ^    INTERFERON ALPHA-2;                                     #    1                            
  RMSD =     1.39 A
  TRANSFORM    0.2716 -0.8160  0.5103 -0.7125 -0.5269 -0.4633 -0.6469  0.2378  0.7245    -4.801    47.008   -21.836              
         T  <A  34   THR    > matches  <A 127   THR    > 
         K  <A  60   LYS    > matches  <A 131   LYS    > 
         E  <A 124   GLU    > matches  <A  41   GLU    > 
 
KERBm  3*FOUND in 3wdh  size =    3  ^    TYPE I PULLULANASE;                                     #    2                            
  RMSD =     1.39 A
  TRANSFORM   -0.4529 -0.7233 -0.5212 -0.6836  0.6570 -0.3179 -0.5724 -0.2123  0.7920     6.603    30.668    33.424              
         T  <A  34   THR    > matches  <A 399   THR    >                        ( 23.3 A from   CA    CA A 801  )
         K  <A  60   LYS    > matches  <A 403   LYS    >                        ( 26.7 A from   CA    CA A 801  )
         E  <A 124   GLU    > matches  <A 386   GLU    >                        ( 26.9 A from   CA    CA A 801  )
 
KERBm  3*FOUND in 4i2z  size =    3  ^    PROTEIN UNC-45;                                         #    2                            
  RMSD =     1.39 A
  TRANSFORM   -0.4279 -0.8531  0.2985  0.6296 -0.5183 -0.5787 -0.6485  0.0597 -0.7589    59.065    33.189    63.467              
         T  <A  34   THR    > matches  <A 539   THR    > 
         K  <A  60   LYS    > matches  <A 541   LYS    > 
         E  <A 124   GLU    > matches  <A 686   GLU    > 
 
KERBm  3*FOUND in 1uly  size =    3  ^    HYPOTHETICAL PROTEIN PH1932;                            #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.2493  0.8893 -0.3835 -0.3703 -0.4534 -0.8107  0.8948  0.0601 -0.4423    17.554    18.245    56.264              
         T  <A  34   THR    > matches  <A  82   THR    > 
         K  <A  60   LYS    > matches  <A   6   LYS    > 
         E  <A 124   GLU    > matches  <A  76   GLU    > 
 
KERBm  3*FOUND in 4yv7  size =    3  ^    PERIPLASMIC BINDING PROTEIN/LACI TRANSCRIPTIONAL RE     #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.7060 -0.4022  0.5830  0.0245  0.8087  0.5877  0.7078 -0.4292  0.5611    42.672   -10.206   -15.920              
         T  <A  34   THR    > matches  <A  59   THR    >                        ( 12.6 A from    C3  GOL A 401  )
         K  <A  60   LYS    > matches  <A  63   LYS    >                        ( 18.7 A from    C3  GOL A 401  )
         E  <A 124   GLU    > matches  <A 259   GLU    >                        ( 12.7 A from    O3  GOL A 401  )
 
KERBm  3*FOUND in 3v0a  size =    3  ^    BONT/A;                                                 #    3                            
  RMSD =     1.39 A
  TRANSFORM    0.0714 -0.1210 -0.9901  0.9973 -0.0094  0.0730  0.0181  0.9926 -0.1200    62.775   -92.889   -14.062              
         T  <A  34   THR    > matches  <B 576   THR    >                        ( 27.0 A from    C6  MES B1203  )
         K  <A  60   LYS    > matches  <B 587   LYS    >                        ( 25.8 A from    O4  SO4 B1197  )
         E  <A 124   GLU    > matches  <B 564   GLU    >                        ( 27.3 A from    O3  SO4 B1198  )
 
KERBm  3*FOUND in 6bzg  size =    3  ^    PROTEIN ZIP2;                                           #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.5634 -0.2219  0.7958  0.3073 -0.9504 -0.0474 -0.7669 -0.2178 -0.6037    -7.753    23.037    74.655              
         T  <A  34   THR    > matches  <B 619   THR    >                        ( 13.1 A from    C11 P6G A 202  )
         K  <A  60   LYS    > matches  <B 515   LYS    >                        ( 18.7 A from    C11 P6G A 202  )
         E  <A 124   GLU    > matches  <A  44   GLU    >                        (  6.8 A from    O3  SO4 A 201  )
 
KERBm  3*FOUND in 5aee  size =    3  ^    ALPHA-GLUCOSIDASE YIHQ;                                 #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.3674 -0.8288 -0.4220  0.4622 -0.5564  0.6904  0.8071 -0.0586 -0.5875    60.309   -20.797    48.914              
         T  <A  34   THR    > matches  <A 231   THR    >                        ( 34.4 A from   CA    CA A1679  )
         K  <A  60   LYS    > matches  <A 192   LYS    >                        ( 31.9 A from   CA    CA A1680  )
         E  <A 124   GLU    > matches  <A 574   GLU    >                        ( 31.8 A from    O15 NSQ A1681  )
 
KERBm  3*FOUND in 1r42  size =    3  ^    ANGIOTENSIN I CONVERTING ENZYME 2;                      #    2                            
  RMSD =     1.39 A
  TRANSFORM    0.2731  0.1562 -0.9492  0.6562  0.6913  0.3025 -0.7034  0.7055 -0.0863    40.728   -86.981    -3.011              
         T  <A  34   THR    > matches  <A 434   THR    >                        ( 19.3 A from    C8  NAG A 802  )
         K  <A  60   LYS    > matches  <A 288   LYS    >                        ( 23.9 A from    C8  NAG A 802  )
         E  <A 124   GLU    > matches  <A 536   GLU    >                        ( 10.2 A from    O7  NAG A 802  )
 
KERBm  3*FOUND in 1w2y  size =    3  ^    DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDE                 #    2                            
  RMSD =     1.39 A
  TRANSFORM    0.7507  0.6325 -0.1905  0.5658 -0.4668  0.6797 -0.3410  0.6180  0.7084   -50.010   -14.049     8.475              
         T  <A  34   THR    > matches  <A 156   THR    >                        ( 20.6 A from   MG    MG A1232  )
         K  <A  60   LYS    > matches  <A 160   LYS    >                        ( 21.0 A from   MG    MG A1232  )
         E  <A 124   GLU    > matches  <A 104   GLU    >                        ( 23.2 A from    O2  DUN A1230  )
 
KERBm  3*FOUND in 5e7p  size =    3  ^    CELL DIVISION CONTROL PROTEIN CDC48;                    #    2                            
  RMSD =     1.39 A
  TRANSFORM   -0.3851 -0.6006  0.7006 -0.8006  0.5951  0.0701  0.4591  0.5339  0.7101    22.395   -14.488   -82.480              
         T  <A  34   THR    > matches  <A 366   THR    >                        (  5.1 A from    O2B ADP A 901  )
         K  <A  60   LYS    > matches  <A 276   LYS    >                        ( -2.8 A from    O3B ADP A 901s )
         E  <A 124   GLU    > matches  <A 381   GLU    >                        ( 21.4 A from    C8  PG4 A 903  )
 
KERBm  3*FOUND in 5i3t  size =    3  ^    LINALOOL DEHYDRATASE/ISOMERASE;                         #    2                            
  RMSD =     1.39 A
  TRANSFORM   -0.6549  0.1998  0.7288  0.1215 -0.9240  0.3625 -0.7459 -0.3259 -0.5809    -9.280     4.911   121.432              
         T  <A  34   THR    > matches  <A  88   THR    >                        (  9.9 A from    C2  BU2 A 501  )
         K  <A  60   LYS    > matches  <A  86   LYS    >                        (  5.6 A from   CL    CL A 502  )
         E  <A 124   GLU    > matches  <A 201   GLU    >                        (  6.2 A from    K     K A 503  )
 
KERBm  3*FOUND in 2q6m  size =    3  ^    CHOLIX TOXIN;                                           #    1                            
  RMSD =     1.39 A
  TRANSFORM    0.9085  0.4167  0.0311  0.3842 -0.8623  0.3299 -0.1643  0.2878  0.9435   -26.019    33.634    -9.007              
         T  <A  34   THR    > matches  <A 496   THR    >                        (  9.4 A from    CAE P34 A1001  )
         K  <A  60   LYS    > matches  <A 623   LYS    >                        ( 14.8 A from    CAE P34 A1001  )
         E  <A 124   GLU    > matches  <A 606   GLU    >                        ( 12.3 A from    CAJ P34 A1001  )
 
KERBm  3*FOUND in 2hig  size =    3  ^    6-PHOSPHO-1-FRUCTOKINASE;                               #    2                            
  RMSD =     1.39 A
  TRANSFORM    0.7794 -0.6179 -0.1033 -0.0759 -0.2567  0.9635  0.6219  0.7431  0.2470    21.079    11.883   -30.375              
         T  <A  34   THR    > matches  <A  98   THR    >                        ( 60.7 A from   NA    NA A 488  )
         K  <A  60   LYS    > matches  <A 130   LYS    >                        ( 63.5 A from   NA    NA A 488  )
         E  <A 124   GLU    > matches  <A  83   GLU    >                        ( 55.8 A from   NA    NA A 488  )
 
KERBm  3*FOUND in 4tnm  size =    3  ^    IMPORTIN SUBUNIT ALPHA;                                 #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.7550  0.0648  0.6525 -0.4500  0.6726 -0.5875  0.4769  0.7371  0.4787    70.778    34.565   -68.487              
         T  <A  34   THR    > matches  <A 433   THR    > 
         K  <A  60   LYS    > matches  <A 488   LYS    > 
         E  <A 124   GLU    > matches  <A 385   GLU    > 
 
KERBm  3*FOUND in 4au2  size =    3  ^    SERPIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PRO     #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.2748 -0.9319 -0.2368 -0.7809  0.0726  0.6204  0.5609 -0.3555  0.7477   -70.327    13.769   -47.396              
         T  <A  34   THR    > matches  <A 127   THR    > 
         K  <A  60   LYS    > matches  <A 129   LYS    > 
         E  <A 124   GLU    > matches  <A 212   GLU    > 
 
KERBm  3*FOUND in 5wtz  size =    3  ^    BINARY ENTEROTOXIN OF CLOSTRIDIUM PERFRINGENS COMPO     #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.4230 -0.3647  0.8295  0.0054 -0.9164 -0.4002 -0.9061  0.1648 -0.3896    52.682   -23.639    36.098              
         T  <A  34   THR    > matches  <A  79   THR    >                        ( 31.2 A from    N7N NAD A 501  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        ( 37.0 A from    N7N NAD A 501  )
         E  <A 124   GLU    > matches  <A  65   GLU    >                        ( 25.2 A from    N7N NAD A 501  )
 
KERBm  3*FOUND in 2px0  size =    3  ^    FLAGELLAR BIOSYNTHESIS PROTEIN FLHF;                    #    1                            
  RMSD =     1.39 A
  TRANSFORM   -0.4170 -0.6590 -0.6260 -0.9055  0.3606  0.2237 -0.0783 -0.6601  0.7471    65.014   -28.544   -11.637              
         T  <A  34   THR    > matches  <A 128   THR    >                        ( 25.5 A from    O6  GNP A   1  )
         K  <A  60   LYS    > matches  <A 125   LYS    >                        ( 25.1 A from    O6  GNP A   1  )
         E  <A 124   GLU    > matches  <A 142   GLU    >                        ( 42.9 A from    O6  GNP A   1  )
 
KERBm  3*FOUND in 1vjo  size =    3  ^    ALANINE--GLYOXYLATE AMINOTRANSFERASE;                   #    1                            
  RMSD =     1.39 A
  TRANSFORM    0.2100 -0.8255 -0.5239 -0.9633 -0.2662  0.0333  0.1669 -0.4978  0.8511    68.520    18.019    16.643              
         T  <A  34   THR    > matches  <A 186   THR    >                        ( -4.5 A from    O3  PLP A 400s )
         K  <A  60   LYS    > matches  <A 209   LYS    >                        ( -2.7 A from    O4A PLP A 400s )
         E  <A 124   GLU    > matches  <A 309   GLU    >                        ( 20.3 A from    C2A PLP A 400  )
 
KERBm  3*FOUND in 1edz  size =    3  ^    5,10-METHYLENETETRAHYDROFOLATE DEHYDROGENASE;           #    1                            
  RMSD =     1.39 A
  TRANSFORM    0.3290  0.8780  0.3477 -0.5860 -0.0989  0.8043 -0.7405  0.4683 -0.4819     3.863    13.724     2.647              
         T  <A  34   THR    > matches  <A  55   THR    > 
         K  <A  60   LYS    > matches  <A  59   LYS    > 
         E  <A 124   GLU    > matches  <A 256   GLU    > 
 
KERBm  3*FOUND in 3vgj  size =    3  ^    TYROSYL-TRNA SYNTHETASE, PUTATIVE;                      #    1                            
  RMSD =     1.39 A
  TRANSFORM    0.6138 -0.7851  0.0832 -0.1091  0.0201  0.9938  0.7819  0.6191  0.0733     9.035   -57.968    -5.356              
         T  <A  34   THR    > matches  <A  90   THR    >                        ( 15.0 A from    OH  TYR A 401  )
         K  <A  60   LYS    > matches  <A  56   LYS    >                        ( 19.9 A from    OH  TYR A 401  )
         E  <A 124   GLU    > matches  <A 122   GLU    >                        ( 18.9 A from    C5' AMP A 402  )
 
KERBm  3*FOUND in 1miw  size =    3  ^    TRNA CCA-ADDING ENZYME;                                 #    2                            
  RMSD =     1.39 A
  TRANSFORM   -0.0494  0.9943 -0.0941 -0.9948 -0.0405  0.0934 -0.0891 -0.0982 -0.9912   -31.829    47.701    36.194              
         T  <A  34   THR    > matches  <A 399   THR    >                        ( 63.4 A from    O2G ATP A5501  )
         K  <A  60   LYS    > matches  <A 402   LYS    >                        ( 70.0 A from    O2G ATP A5501  )
         E  <A 124   GLU    > matches  <A 300   GLU    >                        ( 45.9 A from    O2G ATP A5501  )
 
KERBm  3*FOUND in 2gxg  size =    3  ^    146AA LONG HYPOTHETICAL TRANSCRIPTIONAL REGULATOR;      #    2                            
  RMSD =     1.39 A
  TRANSFORM   -0.7361 -0.5123  0.4424 -0.6681  0.6548 -0.3535  0.1086  0.5557  0.8242    32.526    18.424   -40.981              
         T  <A  34   THR    > matches  <A 103   THR    > 
         K  <A  60   LYS    > matches  <A  99   LYS    > 
         E  <A 124   GLU    > matches  <A 117   GLU    > 
 
KERBm  3*FOUND in 2aka  size =    3  ^    MYOSIN II HEAVY CHAIN;                                  #    2                            
  RMSD =     1.39 A
  TRANSFORM   -0.1474  0.0770  0.9861  0.2193  0.9747 -0.0433  0.9645 -0.2099  0.1606   -14.623   -47.296   -14.317              
         T  <A  34   THR    > matches  <A 513   THR    > 
         K  <A  60   LYS    > matches  <A 557   LYS    > 
         E  <A 124   GLU    > matches  <A 264   GLU    > 
 
KERBm  3*FOUND in 3pgb  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.39 A
  TRANSFORM    0.0102 -0.1645  0.9863  0.1617 -0.9731 -0.1640 -0.9868 -0.1612 -0.0166    42.239   -14.702   -20.500              
         T  <A  34   THR    > matches  <A 500   THR    >                        (  3.5 A from    O   TPQ A 504  )
         K  <A  60   LYS    > matches  <A 505+  LYS    >                        (  3.4 A from    C   TPQ A 504  )
         E  <A 124   GLU    > matches  <A 457   GLU    >                        ( 14.5 A from    O6  NAG A4491  )
 
KERBm  3*FOUND in 1hy0  size =    3  ^    DELTA CRYSTALLIN I;                                     #    2                            
  RMSD =     1.39 A
  TRANSFORM   -0.0859 -0.0353 -0.9957 -0.9961  0.0244  0.0851 -0.0213 -0.9991  0.0373    64.417   -25.766    51.233              
         T  <A  34   THR    > matches  <A 338   THR    >                        ( 21.5 A from    O3  SO4 A1001  )
         K  <A  60   LYS    > matches  <A 299   LYS    >                        ( 16.5 A from    O3  SO4 A1001  )
         E  <A 124   GLU    > matches  <A  36   GLU    >                        ( 38.0 A from    O3  SO4 A1001  )
 
KERBm  3*FOUND in 5b3z  size =    3  ^    PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTIN     #    1                            
  RMSD =     1.39 A
  TRANSFORM    0.2494  0.9473  0.2009  0.8687 -0.1272 -0.4788  0.4280 -0.2939  0.8546    13.797    28.964   -13.741              
         T  <A  34   THR    > matches  <A  72   THR    >                        ( 21.1 A from    O1' MAL A 501  )
         K  <A  60   LYS    > matches  <A  70   LYS    >                        ( 23.3 A from    O1' MAL A 501  )
         E  <A 124   GLU    > matches  <A  80   GLU    >                        (  5.6 A from    O4  MAL A 501  )
 
KERBm  3*FOUND in 3v7q  size =    3  ^    PROBABLE RIBOSOMAL PROTEIN YLXQ;                        #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.8399 -0.1888 -0.5088 -0.3681  0.4909 -0.7897 -0.3989 -0.8505 -0.3428    10.087   -14.860     5.589              
         T  <A  34   THR    > matches  <A  48   THR    >                        (  7.8 A from    K     K A 202  )
         K  <A  60   LYS    > matches  <A  51   LYS    >                        (  9.1 A from    O6  CIT A 201  )
         E  <A 124   GLU    > matches  <A  79   GLU    >                        ( 13.6 A from    K     K A 202  )
 
KERBm  3*FOUND in 1i8f  size =    3  ^    PUTATIVE SNRNP SM-LIKE PROTEIN;                         #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.9737 -0.0830  0.2120 -0.1035  0.9908 -0.0875  0.2028  0.1071  0.9734    64.974   -63.913   -19.382              
         T  <A  34   THR    > matches  <A  15   THR    >                        ( 19.4 A from    O2  GOL A1001  )
         K  <A  60   LYS    > matches  <A  10+  LYS    >                        ( 24.5 A from    O2  GOL A1001  )
         E  <A 124   GLU    > matches  <A  50   GLU    >                        ( 23.6 A from    O2  GOL A1001  )
 
KERBm  3*FOUND in 3rrc  size =    3  ^    DUFFY RECEPTOR;                                         #    2                            
  RMSD =     1.40 A
  TRANSFORM    0.1148  0.1775 -0.9774 -0.5792  0.8113  0.0793 -0.8070 -0.5571 -0.1959    32.626   -41.720    -5.070              
         T  <A  34   THR    > matches  <A 406   THR    >                        ( 12.8 A from    H22 EDO A  13  )
         K  <A  60   LYS    > matches  <A 410   LYS    >                        ( 15.5 A from    H22 EDO A   7  )
         E  <A 124   GLU    > matches  <A 481   GLU    >                        ( 12.6 A from    H22 EDO A   2  )
 
KERBm  3*FOUND in 4xa7  size =    3  ^    NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT      #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.1956  0.9757 -0.0988 -0.9233  0.2172  0.3167 -0.3304 -0.0293 -0.9434    -4.461    -1.051    56.838              
         T  <A  34   THR    > matches  <A 170   THR    >                        ( 18.2 A from   CL    CL A 302  )
         K  <A  60   LYS    > matches  <A  48   LYS    >                        ( 17.2 A from    O4  FMN A 301  )
         E  <A 124   GLU    > matches  <A 216   GLU    >                        ( 20.7 A from    O2P FMN A 301  )
 
KERBm  3*FOUND in 4k0j  size =    3  ^    HEAVY METAL CATION TRICOMPONENT EFFLUX PUMP ZNEA(CZ     #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.0893  0.4971  0.8631  0.2659  0.8232 -0.5016  0.9599 -0.2743  0.0587   -25.381   -46.865   -19.789              
         T  <A  34   THR    > matches  <A  94   THR    >                        ( 11.5 A from   ZN    ZN A1101  )
         K  <A  60   LYS    > matches  <A 659   LYS    >                        (  9.5 A from   ZN    ZN A1101  )
         E  <A 124   GLU    > matches  <A  59   GLU    >                        ( 25.2 A from   ZN    ZN A1101  )
 
KERBm  3*FOUND in 5jk9  size =    3  ^    IZUMO SPERM-EGG FUSION PROTEIN 1;                       #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.3368  0.7389 -0.5836  0.4134  0.4408  0.7967 -0.8460  0.5096  0.1570    20.859    -6.412    25.619              
         T  <A  34   THR    > matches  <A 145   THR    >                        ( 42.7 A from    C6  NAG A 300  )
         K  <A  60   LYS    > matches  <A 154   LYS    >                        ( 48.1 A from    C6  NAG A 300  )
         E  <A 124   GLU    > matches  <A 183   GLU    >                        ( 29.6 A from    C6  NAG A 300  )
 
KERBm  3*FOUND in 1oz9  size =    3  ^    HYPOTHETICAL PROTEIN AQ_1354;                           #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.7420 -0.6362  0.2114 -0.1555  0.4701  0.8688  0.6521 -0.6118  0.4478    60.382   -41.915   -24.876              
         T  <A  34   THR    > matches  <A  48   THR    > 
         K  <A  60   LYS    > matches  <A  16   LYS    > 
         E  <A 124   GLU    > matches  <A 126   GLU    > 
 
KERBm  3*FOUND in 4cyf  size =    3  ^    PANTETHEINASE;                                          #    2                            
  RMSD =     1.40 A
  TRANSFORM   -0.9922  0.1227  0.0209 -0.0450 -0.1971 -0.9793  0.1161  0.9727 -0.2011   117.595    83.197  -299.093              
         T  <A  34   THR    > matches  <A 222   THR    >                        ( 15.1 A from    O   CSO A 211  )
         K  <A  60   LYS    > matches  <A 225   LYS    >                        ( 14.5 A from    C8  NAG A 602  )
         E  <A 124   GLU    > matches  <A 103   GLU    >                        ( 24.4 A from    N   CSO A 211  )
 
KERBm  3*FOUND in 3fqd  size =    3  ^    5'-3' EXORIBONUCLEASE 2;                                #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.6005 -0.3791 -0.7041  0.4653 -0.8817  0.0779  0.6503  0.2808 -0.7058    41.040    32.632    -0.303              
         T  <A  34   THR    > matches  <A  26   THR    > 
         K  <A  60   LYS    > matches  <A  28   LYS    > 
         E  <A 124   GLU    > matches  <A  48   GLU    > 
 
KERBm  3*FOUND in 3m62  size =    3  ^    UBIQUITIN CONJUGATION FACTOR E4;                        #    2                            
  RMSD =     1.40 A
  TRANSFORM   -0.0252 -0.9248 -0.3795 -0.9827 -0.0469  0.1794  0.1837 -0.3775  0.9076    23.642    11.676    -3.695              
         T  <A  34   THR    > matches  <A 808   THR    >                        ( 39.9 A from    C14 1PE A 962  )
         K  <A  60   LYS    > matches  <A 804   LYS    >                        ( 43.4 A from    C14 1PE A 962  )
         E  <A 124   GLU    > matches  <A 818   GLU    >                        ( 43.9 A from    C25 1PE A 962  )
 
KERBm  3*FOUND in 2vdv  size =    3  ^    TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE;                 #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.6864  0.5951  0.4181  0.0074  0.5806 -0.8142  0.7272  0.5557  0.4029    67.165    11.945    64.633              
         T  <A  34   THR    > matches  <E 146   THR    >                        ( 22.2 A from    OXT SAM E1287  )
         K  <A  60   LYS    > matches  <E 148+  LYS    >                        ( 26.7 A from    CA  SAM E1287  )
         E  <A 124   GLU    > matches  <E 260   GLU    >                        (  7.1 A from    OXT SAM E1287  )
 
KERBm  3*FOUND in 1r42  size =    3  ^    ANGIOTENSIN I CONVERTING ENZYME 2;                      #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.6984  0.5963 -0.3957  0.6091  0.2050 -0.7662  0.3758  0.7761  0.5064    21.442   -18.962   -69.594              
         T  <A  34   THR    > matches  <A 414   THR    >                        (  9.0 A from    C8  NAG A 802  )
         K  <A  60   LYS    > matches  <A 416   LYS    >                        (  7.7 A from    O7  NAG A 802  )
         E  <A 124   GLU    > matches  <A 402   GLU    >                        ( -1.8 A from   ZN    ZN A 804s )
 
KERBm  3*FOUND in 3v8s  size =    3  ^    RHO-ASSOCIATED PROTEIN KINASE 1;                        #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.8572  0.3550  0.3730  0.2971 -0.9326  0.2049 -0.4206  0.0648  0.9049    61.621    12.094   -49.898              
         T  <A  34   THR    > matches  <A 318   THR    >                        ( 29.8 A from    C07 0HD A 501  )
         K  <A  60   LYS    > matches  <A 294   LYS    >                        ( 35.2 A from    C05 0HD A 501  )
         E  <A 124   GLU    > matches  <A 226   GLU    >                        ( 31.2 A from    C08 0HD A 501  )
 
KERBm  3*FOUND in 1luc  size =    3  ^    BACTERIAL LUCIFERASE;                                   #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.2344  0.7992 -0.5535 -0.9596 -0.0991  0.2634 -0.1557 -0.5928 -0.7901    45.872    53.501    42.857              
         T  <A  34   THR    > matches  <A 318   THR    >                        ( 12.2 A from   MG    MG A2003  )
         K  <A  60   LYS    > matches  <A 354   LYS    >                        ( 14.2 A from   MG    MG A2003  )
         E  <A 124   GLU    > matches  <A 175   GLU    >                        (  5.7 A from    O1  EDO A2502  )
 
KERBm  3*FOUND in 1ulv  size =    3  ^    GLUCODEXTRANASE;                                        #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.2035 -0.1655 -0.9650 -0.6657 -0.7461 -0.0125  0.7179 -0.6450  0.2620    14.907    53.256   -11.642              
         T  <A  34   THR    > matches  <A 120   THR    >                        ( 27.8 A from   CA    CA A2003  )
         K  <A  60   LYS    > matches  <A 225   LYS    >                        ( 33.9 A from   CA    CA A2003  )
         E  <A 124   GLU    > matches  <A  21   GLU    >                        ( 20.2 A from   CA    CA A2003  )
 
KERBm  3*FOUND in 1h72  size =    3  ^    HOMOSERINE KINASE;                                      #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.0209  0.6033  0.7973  0.7320 -0.5524  0.3988 -0.6810 -0.5752  0.4531   -25.833   -27.150    78.780              
         T  <A  34   THR    > matches  <C 257   THR    >                        ( 10.1 A from    O1  HSE C1300  )
         K  <A  60   LYS    > matches  <C 246   LYS    >                        ( 14.9 A from    O1  HSE C1300  )
         E  <A 124   GLU    > matches  <C 130   GLU    >                        (  4.9 A from    O3G ANP C1301  )
 
KERBm  3*FOUND in 1jy2  size =    3  ^    FIBRINOGEN ALPHA CHAIN;                                 #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.4342 -0.1704  0.8846 -0.8781  0.1391  0.4578  0.2011  0.9755  0.0893    19.690    -9.843    16.724              
         T  <A  34   THR    > matches  <O  92   THR    > 
         K  <A  60   LYS    > matches  <O  88   LYS    > 
         E  <A 124   GLU    > matches  <O 105   GLU    > 
 
KERBm  3*FOUND in 3eh1  size =    3  ^    PROTEIN TRANSPORT PROTEIN SEC24B;                       #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.6320  0.3284 -0.7019 -0.6424 -0.7286  0.2375  0.4335 -0.6010 -0.6715    46.837    50.075    -5.898              
         T  <A  34   THR    > matches  <A 915   THR    >                        ( 39.8 A from   ZN    ZN A1269  )
         K  <A  60   LYS    > matches  <A 911   LYS    >                        ( 43.9 A from   ZN    ZN A1269  )
         E  <A 124   GLU    > matches  <A 990   GLU    >                        ( 27.4 A from   ZN    ZN A1269  )
 
KERBm  3*FOUND in 1tg7  size =    3  ^    BETA-GALACTOSIDASE;                                     #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.0793 -0.7913  0.6062  0.8018 -0.4120 -0.4329 -0.5924 -0.4517 -0.6671   -65.173    22.248   139.575              
         T  <A  34   THR    > matches  <A 496   THR    >                        ( 11.3 A from   NA    NA A9002  )
         K  <A  60   LYS    > matches  <A 498   LYS    >                        (  7.7 A from   NA    NA A9002  )
         E  <A 124   GLU    > matches  <A 378   GLU    >                        ( -2.8 A from    O2  MAN A3005s )
 
KERBm  3*FOUND in 2b3f  size =    3  ^    GLUCOSE-BINDING PROTEIN;                                #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.1057  0.8712 -0.4795  0.0046  0.4817  0.8763 -0.9944  0.0949 -0.0469   -35.349   -46.236    51.895              
         T  <A  34   THR    > matches  <A 151   THR    >                        ( 31.5 A from    C6  GAL A3310  )
         K  <A  60   LYS    > matches  <A 155   LYS    >                        ( 32.7 A from    C6  GAL A3310  )
         E  <A 124   GLU    > matches  <A 206   GLU    >                        ( 28.2 A from    O1  GAL A3310  )
 
KERBm  3*FOUND in 5gz5  size =    3  ^    SNAKE VENOM PHOSPHODIESTERASE (PDE);                    #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.2373 -0.6921 -0.6817 -0.6597 -0.6299  0.4099  0.7131 -0.3524  0.6060    11.699    -1.831    60.841              
         T  <A  34   THR    > matches  <A 489   THR    >                        (  0.8 A from    CB  THR A 489  )
         K  <A  60   LYS    > matches  <A 175   LYS    >                        (  0.0 A from    NZ  LYS A 175  )
         E  <A 124   GLU    > matches  <A 820   GLU    >                        (  0.5 A from    CD  GLU A 820  )
 
KERBm  3*FOUND in 3err  size =    3  ^    FUSION PROTEIN OF MICROTUBULE BINDING DOMAIN FROM M     #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.0316  0.3682  0.9292 -0.9822 -0.1609  0.0972 -0.1853  0.9157 -0.3566   -14.762    23.846    56.475              
         T  <A  34   THR    > matches  <A 380   THR    >                        ( -3.8 A from    C4' AMP A1507s )
         K  <A  60   LYS    > matches  <A 277   LYS    >                        ( -3.6 A from    O1P AMP A1507s )
         E  <A 124   GLU    > matches  <A 119   GLU    >                        ( 16.4 A from    O3' AMP A1507  )
 
KERBm  3*FOUND in 4nqi  size =    3  ^    SH3 DOMAIN-CONTAINING PROTEIN;                          #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.8178  0.1895 -0.5433  0.4918  0.2599  0.8310 -0.2987  0.9468 -0.1194    46.845   -65.039    29.269              
         T  <A  34   THR    > matches  <A  31   THR    > 
         K  <A  60   LYS    > matches  <A  35   LYS    > 
         E  <A 124   GLU    > matches  <A 117   GLU    > 
 
KERBm  3*FOUND in 2h4q  size =    3  ^    HETEROCHROMATIN-ASSOCIATED PROTEIN MENT;                #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.7454  0.1643  0.6461  0.6356  0.1169 -0.7631  0.2010 -0.9794  0.0173    16.999     4.245    43.398              
         T  <A  34   THR    > matches  <A 103   THR    > 
         K  <A  60   LYS    > matches  <A 107   LYS    > 
         E  <A 124   GLU    > matches  <A  92   GLU    > 
 
KERBm  3*FOUND in 4qb7  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.40 A
  TRANSFORM   -0.2662  0.7430  0.6140 -0.0692  0.6206 -0.7811  0.9614  0.2504  0.1138   -43.662   -13.677   -17.575              
         T  <A  34   THR    > matches  <A  51   THR    >                        (  9.4 A from    O4  SO4 A 412  )
         K  <A  60   LYS    > matches  <A  55   LYS    >                        ( 11.2 A from    O4  SO4 A 412  )
         E  <A 124   GLU    > matches  <A 365   GLU    >                        ( 12.4 A from    O3  SO4 A 401  )
 
KERBm  3*FOUND in 4ate  size =    3  ^    BETA-PORPHYRANASE A;                                    #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.5283  0.2491  0.8117  0.0083 -0.9575  0.2884 -0.8490  0.1456  0.5079    39.991   -28.347    38.653              
         T  <A  34   THR    > matches  <A 261   THR    >                        ( 12.8 A from   CL    CL A1277  )
         K  <A  60   LYS    > matches  <A 263   LYS    >                        ( 11.7 A from   CA    CA A1275  )
         E  <A 124   GLU    > matches  <A  85   GLU    >                        ( 12.3 A from   CL    CL A1277  )
 
KERBm  3*FOUND in 5mx9  size =    3  ^    PHOSPHATIDYLETHANOLAMINE TRANSFERASE MCR-2;             #    1                            
  RMSD =     1.40 A
  TRANSFORM    0.4013 -0.6601  0.6350  0.7842 -0.1107 -0.6106 -0.4733 -0.7430 -0.4732    39.910   -15.478    -2.168              
         T  <A  34   THR    > matches  <A 285   THR    >                        ( -2.6 A from   ZN    ZN A 602s )
         K  <A  60   LYS    > matches  <A 333   LYS    >                        ( -7.1 A from    H32 GOL A 604s )
         E  <A 124   GLU    > matches  <A 472   GLU    >                        ( 11.2 A from    H32 GOL A 605  )
 
KERBm  3*FOUND in 3kr4  size =    3  ^    M17 LEUCYL AMINOPEPTIDASE;                              #    1                            
  RMSD =     1.41 A
  TRANSFORM    0.5337  0.8093  0.2453 -0.8235  0.4315  0.3682 -0.1921  0.3985 -0.8968   -95.260     7.315    36.353              
         T  <A  34   THR    > matches  <A 486   THR    >                        ( -5.3 A from    N2  BES A1003s )
         K  <A  60   LYS    > matches  <A 374   LYS    >                        ( -2.2 A from   ZN    ZN A1001s )
         E  <A 124   GLU    > matches  <A 245   GLU    >                        ( 19.2 A from    C23 1PE A  19  )
 
KERBm  3*FOUND in 5x4t  size =    3  ^    PHOTOACTIVATED ADENYLYL CYCLASE;                        #    2                            
  RMSD =     1.41 A
  TRANSFORM    0.8889 -0.4527  0.0705 -0.3183 -0.7208 -0.6158 -0.3296 -0.5249  0.7848    10.355   -15.862    16.014              
         T  <A  34   THR    > matches  <A   5   THR    >                        ( 12.0 A from    O4  FMN A 401  )
         K  <A  60   LYS    > matches  <A  77   LYS    >                        ( 17.9 A from    O4  FMN A 401  )
         E  <A 124   GLU    > matches  <A  20   GLU    >                        ( 12.0 A from    C6  FMN A 401  )
 
KERBm  3*FOUND in 3w15  size =    3  ^    PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR;                #    2                            
  RMSD =     1.41 A
  TRANSFORM   -0.2259  0.3335 -0.9153  0.3652  0.9000  0.2378 -0.9031  0.2805  0.3251    50.468    -6.935    44.149              
         T  <A  34   THR    > matches  <A 328   THR    >                        ( 25.8 A from    O3  NO3 C 403  )
         K  <A  60   LYS    > matches  <A 324+  LYS    >                        ( 26.2 A from    O3  NO3 A 401  )
         E  <A 124   GLU    > matches  <C  95   GLU    >                        ( 23.2 A from    O1  NO3 C 401  )
 
KERBm  3*FOUND in 3rlo  size =    3  ^    GAMMA-INTERFERON-INDUCIBLE PROTEIN 16;                  #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.0863 -0.2903 -0.9530 -0.8853  0.4612 -0.0603 -0.4570 -0.8385  0.2968     1.274    27.300    35.077              
         T  <A  34   THR    > matches  <A 703   THR    >                        ( 10.9 A from    O2  EDO A   2  )
         K  <A  60   LYS    > matches  <A 696   LYS    >                        (-16.0 A from    O1  FMT A 771s )
         E  <A 124   GLU    > matches  <A 592   GLU    >                        (  8.8 A from    O2  FMT A 771  )
 
KERBm  3*FOUND in 4d5b  size =    3  ^    CYMA;                                                   #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.3480 -0.8943  0.2813  0.0704 -0.3242 -0.9434 -0.9348  0.3085 -0.1757    67.059    26.736   175.127              
         T  <A  34   THR    > matches  <A  36   THR    >                        (  8.2 A from    O3B ACX A1325  )
         K  <A  60   LYS    > matches  <A  44   LYS    >                        (  4.8 A from    O2A ACX A1325  )
         E  <A 124   GLU    > matches  <A 224   GLU    >                        (  8.7 A from    C8  C8E A1339  )
 
KERBm  3*FOUND in 1p4p  size =    3  ^    OUTER SURFACE PROTEIN B;                                #    2                            
  RMSD =     1.41 A
  TRANSFORM   -0.4717  0.8524 -0.2256 -0.2593  0.1104  0.9595 -0.8428 -0.5111 -0.1690    35.182   -57.881    31.087              
         T  <A  34   THR    > matches  <A 167   THR    > 
         K  <A  60   LYS    > matches  <A 159   LYS    > 
         E  <A 124   GLU    > matches  <A 290   GLU    > 
 
KERBm  3*FOUND in 4nzk  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.4278 -0.8913 -0.1501 -0.8494  0.4532 -0.2705 -0.3091 -0.0118  0.9510    59.422    55.600     5.271              
         T  <A  34   THR    > matches  <A 306   THR    >                        ( 16.2 A from    C1  EDO A 401  )
         K  <A  60   LYS    > matches  <A 309   LYS    >                        ( 20.5 A from    C1  EDO A 401  )
         E  <A 124   GLU    > matches  <A 225   GLU    >                        ( 17.4 A from    C1  EDO A 402  )
 
KERBm  3*FOUND in 4ewc  size =    3  ^    PUTATIVE NUCLEOPROTEIN;                                 #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.8050  0.0794  0.5879 -0.0808 -0.9964  0.0239 -0.5878  0.0283 -0.8085    59.783     4.740   103.569              
         T  <A  34   THR    > matches  <A 379   THR    > 
         K  <A  60   LYS    > matches  <A 381   LYS    > 
         E  <A 124   GLU    > matches  <A 343   GLU    > 
 
KERBm  3*FOUND in 2wuq  size =    3  ^    BETA-LACTAMASE REGULATORY PROTEIN BLAB;                 #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.3649 -0.5628 -0.7417 -0.9304  0.1904  0.3132  0.0351 -0.8043  0.5931   107.619     2.115    32.363              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( 21.3 A from    O3  GOL A1318  )
         K  <A  60   LYS    > matches  <A 254   LYS    >                        ( 17.7 A from    O3  GOL A1318  )
         E  <A 124   GLU    > matches  <A  65   GLU    >                        ( 35.8 A from    O3  GOL A1318  )
 
KERBm  3*FOUND in 2r60  size =    3  ^    GLYCOSYL TRANSFERASE, GROUP 1;                          #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.3718 -0.1591  0.9146 -0.5946 -0.7157 -0.3663 -0.7129  0.6800 -0.1715    39.265    52.706     4.088              
         T  <A  34   THR    > matches  <A  78   THR    > 
         K  <A  60   LYS    > matches  <A  80   LYS    > 
         E  <A 124   GLU    > matches  <A 238   GLU    > 
 
KERBm  3*FOUND in 3d7l  size =    3  ^    LIN1944 PROTEIN;                                        #    1                            
  RMSD =     1.41 A
  TRANSFORM    0.8750 -0.4571 -0.1594  0.4440  0.8890 -0.1117 -0.1928 -0.0270 -0.9809    32.394   -96.214   183.989              
         T  <A  34   THR    > matches  <A 110   THR    > 
         K  <A  60   LYS    > matches  <A  86   LYS    > 
         E  <A 124   GLU    > matches  <A  21   GLU    > 
 
KERBm  3*FOUND in 5mx2  size =    3  ^    PHOTOSYSTEM II PROTEIN D1 1;                            #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.6982 -0.4288 -0.5733  0.3120 -0.9030  0.2953  0.6443 -0.0273 -0.7643   -34.887    25.614    -6.495              
         T  <A  34   THR    > matches  <O 121   THR    >                        ( 32.3 A from    O2D HEM V 201  )
         K  <A  60   LYS    > matches  <O 123   LYS    >                        ( 25.8 A from    O2D HEM V 201  )
         E  <A 124   GLU    > matches  <O  55   GLU    >                        ( 35.0 A from    C51 PL9 D 405  )
 
KERBm  3*FOUND in 2qzc  size =    3  ^    TRANSCRIPTIONAL ACTIVATOR TENA-1;                       #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.0584 -0.2101  0.9759  0.9983 -0.0193  0.0556 -0.0071 -0.9775 -0.2108    48.453    -6.560    45.837              
         T  <A  34   THR    > matches  <A 165   THR    >                        ( 10.2 A from    O1  GOL A 217  )
         K  <A  60   LYS    > matches  <A 169   LYS    >                        ( 13.2 A from    O3  GOL A 217  )
         E  <A 124   GLU    > matches  <A 153   GLU    >                        ( 19.5 A from    O1  GOL A 219  )
 
KERBm  3*FOUND in 1bf6  size =    3  ^    PHOSPHOTRIESTERASE HOMOLOGY PROTEIN;                    #    1                            
  RMSD =     1.41 A
  TRANSFORM    0.5136  0.3137  0.7986  0.7054 -0.6843 -0.1848 -0.4885 -0.6583  0.5727    72.178   -32.296    14.339              
         T  <A  34   THR    > matches  <A 134   THR    >                        ( 13.7 A from    O2  SO4 A 294  )
         K  <A  60   LYS    > matches  <A 132   LYS    >                        ( 13.1 A from    O2  SO4 A 294  )
         E  <A 124   GLU    > matches  <A 100   GLU    >                        (  9.4 A from    O3  GOL A 529  )
 
KERBm  3*FOUND in 1ryi  size =    3  ^    GLYCINE OXIDASE;                                        #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.4341  0.8550  0.2838  0.6780  0.1027  0.7278 -0.5931 -0.5084  0.6243  -190.493  -208.080     0.252              
         T  <A  34   THR    > matches  <A 284   THR    >                        ( 16.1 A from    O11 GOA A9110  )
         K  <A  60   LYS    > matches  <A 280   LYS    >                        ( 19.1 A from    O11 GOA A9110  )
         E  <A 124   GLU    > matches  <A 123   GLU    >                        ( 29.2 A from    O12 GOA A9110  )
 
KERBm  3*FOUND in 1b3u  size =    3  ^    PROTEIN (PROTEIN PHOSPHATASE PP2A);                     #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.1670 -0.9593  0.2276  0.9857 -0.1678  0.0158 -0.0231 -0.2270 -0.9736    51.515   -58.195    73.519              
         T  <A  34   THR    > matches  <A 267   THR    > 
         K  <A  60   LYS    > matches  <A 271   LYS    > 
         E  <A 124   GLU    > matches  <A 296   GLU    > 
 
KERBm  3*FOUND in 5wcm  size =    3  ^    BLR6230 PROTEIN;                                        #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.9771 -0.2025  0.0658 -0.1730  0.9353  0.3085  0.1240 -0.2901  0.9489    65.011   -44.823   -15.175              
         T  <A  34   THR    > matches  <A  35   THR    >                        ( 11.2 A from    O12A4NZ A 307  )
         K  <A  60   LYS    > matches  <A  32+  LYS    >                        ( 12.1 A from    O12A4NZ A 307  )
         E  <A 124   GLU    > matches  <A 116   GLU    >                        ( -2.3 A from   ZN    ZN A 304s )
 
KERBm  3*FOUND in 5l3s  size =    3  ^    SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN;             #    5                            
  RMSD =     1.41 A
  TRANSFORM    0.4730  0.6726 -0.5690 -0.7380 -0.0503 -0.6729  0.4812 -0.7383 -0.4726    35.303    11.872    38.641              
         T  <A  34   THR    > matches  <B 189   THR    >                        (  5.9 A from    N7  GNP B 401  )
         K  <A  60   LYS    > matches  <B 192   LYS    >                        ( -3.2 A from    O6  GNP B 401s )
         E  <A 124   GLU    > matches  <B 309   GLU    >                        (  8.0 A from    O3  GOL B 406  )
 
KERBm  3*FOUND in 3kst  size =    3  ^    ENDO-1,4-BETA-XYLANASE;                                 #    1                            
  RMSD =     1.41 A
  TRANSFORM    0.1044 -0.7813 -0.6154  0.1463  0.6241 -0.7675 -0.9837  0.0099 -0.1794    61.088     2.900    48.843              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 18.4 A from   CA    CA A 400  )
         K  <A  60   LYS    > matches  <A 116   LYS    >                        ( 22.8 A from   CA    CA A 400  )
         E  <A 124   GLU    > matches  <A 124   GLU    >                        ( 20.1 A from   CA    CA A 400  )
 
KERBm  3*FOUND in 3ujz  size =    3  ^    METALLOPROTEASE STCE;                                   #    1                            
  RMSD =     1.41 A
  TRANSFORM    0.8171 -0.0691  0.5724 -0.5715 -0.2285  0.7882 -0.0764  0.9711  0.2262   -28.377   -62.601   -10.811              
         T  <A  34   THR    > matches  <A 394   THR    >                        ( 25.1 A from   ZN    ZN A   1  )
         K  <A  60   LYS    > matches  <A 756   LYS    >                        ( 22.7 A from   ZN    ZN A   1  )
         E  <A 124   GLU    > matches  <A 573   GLU    >                        ( 35.6 A from   ZN    ZN A   1  )
 
KERBm  3*FOUND in 4pj3  size =    3  ^    INTRON-BINDING PROTEIN AQUARIUS;                        #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.2539  0.2883 -0.9233 -0.8992 -0.4221  0.1155  0.3564 -0.8595 -0.3664   160.379    27.838    51.456              
         T  <A  34   THR    > matches  <A1258   THR    >                        ( 15.3 A from    O2G ANP A1501  )
         K  <A  60   LYS    > matches  <A1256   LYS    >                        ( 12.8 A from    O2G ANP A1501  )
         E  <A 124   GLU    > matches  <A 442   GLU    >                        ( 27.7 A from    O2G ANP A1501  )
 
KERBm  3*FOUND in 3iar  size =    3  ^    ADENOSINE DEAMINASE;                                    #    1                            
  RMSD =     1.41 A
  TRANSFORM    0.2968 -0.5876 -0.7528 -0.7010  0.4012 -0.5896 -0.6484 -0.7027  0.2928    29.400     8.582    31.582              
         T  <A  34   THR    > matches  <A 125   THR    >                        ( -3.3 A from    O2  NO3 A 371s )
         K  <A  60   LYS    > matches  <A 111   LYS    >                        ( -2.8 A from    O1  NO3 A 371s )
         E  <A 124   GLU    > matches  <A 139   GLU    >                        ( 20.6 A from    O2  NO3 A 371  )
 
KERBm  3*FOUND in 4fkm  size =    3  ^    SIMILAR TO FERRIC HYDROXAMATE RECEPTOR 1;               #    3                            
  RMSD =     1.41 A
  TRANSFORM   -0.7787 -0.2443 -0.5779 -0.5207  0.7655  0.3781 -0.3500 -0.5953  0.7233    81.156   -24.553    27.439              
         T  <A  34   THR    > matches  <A 265   THR    >                        (  3.8 A from    N   MLY A 266  )
         K  <A  60   LYS    > matches  <A 261+  LYS    >                        (  3.3 A from    C   MLY A 260  )
         E  <A 124   GLU    > matches  <A 295   GLU    >                        (  4.1 A from    CH1 MLY A 299  )
 
KERBm  3*FOUND in 1d3b  size =    3  ^    PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3);        #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.9500  0.3095  0.0420 -0.2089 -0.5299 -0.8219  0.2321  0.7896 -0.5680    67.976    96.279     3.882              
         T  <A  34   THR    > matches  <B  30   THR    >                        ( 16.8 A from    O6  CIT B 702  )
         K  <A  60   LYS    > matches  <B  32   LYS    >                        ( 17.8 A from    C3  GOL A 614  )
         E  <A 124   GLU    > matches  <B  62   GLU    >                        ( 10.8 A from    O3  GOL B 611  )
 
KERBm  3*FOUND in 3bga  size =    3  ^    BETA-GALACTOSIDASE;                                     #    4                            
  RMSD =     1.41 A
  TRANSFORM    0.5452  0.3183 -0.7755 -0.7625 -0.1962 -0.6165  0.3484 -0.9275 -0.1358   101.150    52.048     2.315              
         T  <A  34   THR    > matches  <A 860   THR    >                        ( 31.3 A from   NA    NA A   6  )
         K  <A  60   LYS    > matches  <A1011   LYS    >                        ( 33.3 A from   NA    NA A   6  )
         E  <A 124   GLU    > matches  <A 821   GLU    >                        ( 36.4 A from   NA    NA A   6  )
 
KERBm  3*FOUND in 4bbw  size =    3  ^    SIALIDASE (NEURAMINIDASE);                              #    1                            
  RMSD =     1.41 A
  TRANSFORM    0.8318  0.5089  0.2218 -0.3051  0.7528 -0.5833  0.4638 -0.4175 -0.7814   -30.575    -0.764    27.172              
         T  <A  34   THR    > matches  <A 283   THR    > 
         K  <A  60   LYS    > matches  <A 319   LYS    > 
         E  <A 124   GLU    > matches  <A 457   GLU    > 
 
KERBm  3*FOUND in 3s98  size =    3  ^    INTERFERON ALPHA/BETA RECEPTOR 1;                       #    1                            
  RMSD =     1.41 A
  TRANSFORM    0.4670  0.7000  0.5403 -0.2424  0.6889 -0.6831  0.8504 -0.1881 -0.4914    72.079    -5.637    14.633              
         T  <A  34   THR    > matches  <A 169   THR    >                        ( 11.8 A from    C1  NAG A 307  )
         K  <A  60   LYS    > matches  <A 144   LYS    >                        ( 10.9 A from    C8  NAG A 307  )
         E  <A 124   GLU    > matches  <A 201   GLU    >                        ( 31.4 A from    O6  NAG A 307  )
 
KERBm  3*FOUND in 3b2y  size =    3  ^    METALLOPEPTIDASE CONTAINING CO-CATALYTIC METALLOACT     #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.4202 -0.8425  0.3371  0.1534  0.3002  0.9415  0.8944 -0.4473 -0.0030    42.684   -44.795    28.163              
         T  <A  34   THR    > matches  <A  44   THR    >                        ( 22.8 A from   NI    NI A 275  )
         K  <A  60   LYS    > matches  <A  42   LYS    >                        ( 24.7 A from   NI    NI A 275  )
         E  <A 124   GLU    > matches  <A 124   GLU    >                        ( 16.2 A from   NI    NI A 275  )
 
KERBm  3*FOUND in 3pqs  size =    3  ^    TRANSFERRIN-BINDING PROTEIN;                            #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.3139 -0.9479 -0.0550 -0.9431  0.3180 -0.0970 -0.1094 -0.0215  0.9938    27.491    36.859     0.675              
         T  <A  34   THR    > matches  <A 305   THR    >                        (  7.0 A from    C1  GOL A 540  )
         K  <A  60   LYS    > matches  <A 510   LYS    >                        ( 14.3 A from    C1  GOL A 540  )
         E  <A 124   GLU    > matches  <A  76   GLU    >                        ( -2.9 A from    O3  GOL A 534s )
 
KERBm  3*FOUND in 3cem  size =    3  ^    GLYCOGEN PHOSPHORYLASE, LIVER FORM;                     #    2                            
  RMSD =     1.41 A
  TRANSFORM   -0.5682 -0.7227 -0.3934 -0.8227  0.4901  0.2881  0.0154 -0.4873  0.8731   142.239   -71.698   -88.951              
         T  <A  34   THR    > matches  <A 668   THR    >                        ( 13.1 A from    O3  NBG A   1  )
         K  <A  60   LYS    > matches  <A 772   LYS    >                        ( 17.7 A from    O2  NBG A   1  )
         E  <A 124   GLU    > matches  <A 701   GLU    >                        ( 16.5 A from    O4  NBG A   1  )
 
KERBm  3*FOUND in 3js6  size =    3  ^    UNCHARACTERIZED PARM PROTEIN;                           #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.8078  0.2246  0.5450 -0.5725 -0.0788 -0.8161  0.1403  0.9713 -0.1922     7.566     1.705    32.268              
         T  <A  34   THR    > matches  <A  74   THR    > 
         K  <A  60   LYS    > matches  <A  42   LYS    > 
         E  <A 124   GLU    > matches  <A  97   GLU    > 
 
KERBm  3*FOUND in 2r7k  size =    3  ^    5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOF     #    1                            
  RMSD =     1.41 A
  TRANSFORM   -0.7134  0.6568  0.2442  0.5601  0.3250  0.7620 -0.4211 -0.6804  0.5997    35.459   -29.473    28.693              
         T  <A  34   THR    > matches  <A  43   THR    >                        ( 16.3 A from    O1  SO4 A 500  )
         K  <A  60   LYS    > matches  <A  37   LYS    >                        ( 15.6 A from    O1  SO4 A 500  )
         E  <A 124   GLU    > matches  <A  77   GLU    >                        ( 22.1 A from    OP1 AMZ A 401  )
 
KERBm  3*FOUND in 4pvc  size =    3  ^    NADPH-DEPENDENT METHYLGLYOXAL REDUCTASE GRE2;           #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.4713  0.8205  0.3235  0.7371  0.5679 -0.3664  0.4843 -0.0658  0.8724    27.592    31.623    -9.177              
         T  <A  34   THR    > matches  <A 303   THR    > 
         K  <A  60   LYS    > matches  <A 140   LYS    > 
         E  <A 124   GLU    > matches  <A 281   GLU    > 
 
KERBm  3*FOUND in 3tgh  size =    3  ^    GLIDEOSOME-ASSOCIATED PROTEIN 50;                       #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.5513 -0.2479  0.7967  0.3430  0.9378  0.0544  0.7606 -0.2433 -0.6020    23.212    20.195   -14.606              
         T  <A  34   THR    > matches  <A 158   THR    >                        ( 31.6 A from    O   DMS A 366  )
         K  <A  60   LYS    > matches  <A 170+  LYS    >                        ( 36.7 A from    O   DMS A 366  )
         E  <A 124   GLU    > matches  <A  56   GLU    >                        ( 25.6 A from    C2  DMS A 366  )
 
KERBm  3*FOUND in 3wnw  size =    3  ^    FERRITIN HEAVY CHAIN;                                   #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.4767  0.5460  0.6890  0.8506  0.0885  0.5183 -0.2220 -0.8331  0.5066    -2.139    61.603     2.904              
         T  <A  34   THR    > matches  <A 153   THR    >                        ( 19.2 A from   FE    FE A 203  )
         K  <A  60   LYS    > matches  <A 157   LYS    >                        ( 15.5 A from   FE    FE A 203  )
         E  <A 124   GLU    > matches  <A 140   GLU    >                        (  6.0 A from   MG    MG A 201  )
 
KERBm  3*FOUND in 2chg  size =    3  ^    REPLICATION FACTOR C SMALL SUBUNIT;                     #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.3983 -0.2621 -0.8790  0.6155  0.6341 -0.4680 -0.6801  0.7275  0.0912    50.732    16.806    24.752              
         T  <A  34   THR    > matches  <A  49   THR    >                        ( -4.7 A from    O3G ANP A1227s )
         K  <A  60   LYS    > matches  <A  51   LYS    >                        ( -2.7 A from    O3G ANP A1227s )
         E  <A 124   GLU    > matches  <A 187   GLU    >                        ( 18.3 A from    C2  ANP A1227  )
 
KERBm  3*FOUND in 2eyu  size =    3  ^    TWITCHING MOTILITY PROTEIN PILT;                        #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.4474  0.7918  0.4157 -0.8228  0.5466 -0.1555  0.3504  0.2725 -0.8961     0.377    -2.802     4.387              
         T  <A  34   THR    > matches  <A 163   THR    > 
         K  <A  60   LYS    > matches  <A 183   LYS    > 
         E  <A 124   GLU    > matches  <A 324   GLU    > 
 
KERBm  3*FOUND in 5n1p  size =    3  ^    PEPTIDOGLYCAN N-ACETYLGLUCOSAMINE DEACETYLASE;          #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.1193 -0.2316 -0.9655  0.6837 -0.6860  0.2490  0.7200  0.6898 -0.0765    81.174    15.989    32.849              
         T  <A  34   THR    > matches  <A 129   THR    >                        ( 11.4 A from   ZN    ZN A 302  )
         K  <A  60   LYS    > matches  <A 134   LYS    >                        ( 15.1 A from   ZN    ZN A 302  )
         E  <A 124   GLU    > matches  <A 116   GLU    >                        ( 13.3 A from    O14 8GK A 301  )
 
KERBm  3*FOUND in 4qdi  size =    3  ^    UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE     #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.4990 -0.6060 -0.6195  0.1634  0.6362 -0.7540 -0.8510  0.4775  0.2185    18.128    -4.025    -9.855              
         T  <A  34   THR    > matches  <A  96   THR    >                        (  9.6 A from    O4' UDP A 502  )
         K  <A  60   LYS    > matches  <A  57   LYS    >                        ( 10.5 A from    O2A UDP A 502  )
         E  <A 124   GLU    > matches  <A 109   GLU    >                        (  9.8 A from    C1  EDO A 505  )
 
KERBm  3*FOUND in 2b5e  size =    3  ^    PROTEIN DISULFIDE-ISOMERASE;                            #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.1915  0.6411 -0.7432 -0.8182 -0.5225 -0.2399  0.5421 -0.5621 -0.6246    12.256   -46.721   -32.058              
         T  <A  34   THR    > matches  <A 278   THR    >                        ( 13.0 A from    O2  GOL A 523  )
         K  <A  60   LYS    > matches  <A 282   LYS    >                        ( 17.3 A from    O2  GOL A 523  )
         E  <A 124   GLU    > matches  <A 268   GLU    >                        ( 11.8 A from    O1  GOL A 523  )
 
KERBm  3*FOUND in 1a9x  size =    3  ^    CARBAMOYL PHOSPHATE SYNTHETASE (LARGE CHAIN);           #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.2749 -0.9296  0.2453 -0.4643 -0.3518 -0.8128 -0.8419 -0.1096  0.5284    40.505    88.712    21.834              
         T  <A  34   THR    > matches  <A 546   THR    >                        ( 11.2 A from   CL    CL B1933  )
         K  <A  60   LYS    > matches  <A 527   LYS    >                        (  8.4 A from   CL    CL B1933  )
         E  <A 124   GLU    > matches  <A 473   GLU    >                        ( 16.1 A from   CL    CL A1936  )
 
KERBm  3*FOUND in 3pei  size =    3  ^    CYTOSOL AMINOPEPTIDASE;                                 #    2                            
  RMSD =     1.42 A
  TRANSFORM   -0.8022  0.1945 -0.5644 -0.1627 -0.9809 -0.1068  0.5744 -0.0061 -0.8185    74.212    27.878    -6.824              
         T  <A  34   THR    > matches  <A 359   THR    >                        (  8.1 A from    C1  EDO A 503  )
         K  <A  60   LYS    > matches  <A 250   LYS    >                        (  6.2 A from   CL    CL A 496  )
         E  <A 124   GLU    > matches  <A 123   GLU    >                        (  8.2 A from    C1  EDO A 504  )
 
KERBm  3*FOUND in 4art  size =    3  ^    STRUCTURAL PROTEIN ORF273;                              #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.3064 -0.9419  0.1373 -0.7879 -0.1700  0.5918  0.5341  0.2895  0.7943    -5.376     8.503   -28.654              
         T  <A  34   THR    > matches  <A  25   THR    >                        ( 26.6 A from    O2 BSO4 A1273  )
         K  <A  60   LYS    > matches  <A  22+  LYS    >                        ( 29.2 A from    O2 BSO4 A1273  )
         E  <A 124   GLU    > matches  <A 267   GLU    >                        ( 20.4 A from    O3 BSO4 A1273  )
 
KERBm  3*FOUND in 4n75  size =    3  ^    OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA;            #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.5103 -0.7714 -0.3802  0.8530  0.5104  0.1092 -0.1098  0.3800 -0.9184    48.313   -79.017    23.264              
         T  <A  34   THR    > matches  <A 612   THR    > 
         K  <A  60   LYS    > matches  <A 610   LYS    > 
         E  <A 124   GLU    > matches  <A 717   GLU    > 
 
KERBm  3*FOUND in 2xw6  size =    3  ^    METHYLGLYOXAL SYNTHASE;                                 #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.1318  0.1905  0.9728 -0.9693 -0.1805  0.1666 -0.2074  0.9650 -0.1608    40.229   -22.888     4.143              
         T  <A  34   THR    > matches  <A  38   THR    >                        ( -3.5 A from    O4  PO4 A1131s )
         K  <A  60   LYS    > matches  <A  13   LYS    >                        ( -2.6 A from    O1  PO4 A1131s )
         E  <A 124   GLU    > matches  <A  70   GLU    >                        ( 18.5 A from    O2  PO4 A1131  )
 
KERBm  3*FOUND in 2e8b  size =    3  ^    PROBABLE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNT     #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.7203 -0.1641 -0.6740 -0.3475  0.9263  0.1458 -0.6004 -0.3393  0.7242    41.280   -40.730    32.120              
         T  <A  34   THR    > matches  <A   5   THR    > 
         K  <A  60   LYS    > matches  <A   8   LYS    > 
         E  <A 124   GLU    > matches  <A 177   GLU    > 
 
KERBm  3*FOUND in 4mu9  size =    3  ^    GLYCOSIDE HYDROLASE FAMILY 73;                          #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.1244  0.8868  0.4452  0.7976 -0.1775  0.5765 -0.5902 -0.4268  0.6852    11.380    -6.850    37.862              
         T  <A  34   THR    > matches  <A 157   THR    >                        ( 21.2 A from    O2  EDO A 402  )
         K  <A  60   LYS    > matches  <A 159   LYS    >                        ( 20.0 A from    O2  EDO A 402  )
         E  <A 124   GLU    > matches  <A 386   GLU    >                        ( 24.7 A from    C7  EPE A 408  )
 
KERBm  3*FOUND in 2ddf  size =    3  ^    ADAM 17;                                                #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.2391  0.5539  0.7975  0.4658 -0.6552  0.5947 -0.8520 -0.5137  0.1013   -13.104   -18.726    45.400              
         T  <A  34   THR    > matches  <A 461   THR    >                        ( 14.9 A from   ZN    ZN A   1  )
         K  <A  60   LYS    > matches  <A 465   LYS    >                        ( 18.2 A from    O4  INN A   3  )
         E  <A 124   GLU    > matches  <A 422   GLU    >                        ( 19.8 A from   ZN    ZN A   1  )
 
KERBm  3*FOUND in 1jfu  size =    3  ^    THIOL:DISULFIDE INTERCHANGE PROTEIN TLPA;               #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.9017  0.2458  0.3556  0.3498  0.0684 -0.9343  0.2540 -0.9669  0.0243    11.295     2.909    30.545              
         T  <A  34   THR    > matches  <A  70   THR    > 
         K  <A  60   LYS    > matches  <A 108   LYS    > 
         E  <A 124   GLU    > matches  <A 165   GLU    > 
 
KERBm  3*FOUND in 5az4  size =    3  ^    FLAGELLAR HOOK SUBUNIT PROTEIN;                         #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.5843 -0.0817 -0.8074  0.2273 -0.9386  0.2595  0.7790  0.3352  0.5299   -24.129   -12.871    68.208              
         T  <A  34   THR    > matches  <A 217   THR    > 
         K  <A  60   LYS    > matches  <A 232   LYS    > 
         E  <A 124   GLU    > matches  <A 667   GLU    > 
 
KERBm  3*FOUND in 4lax  size =    3  ^    PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP4;              #    2                            
  RMSD =     1.42 A
  TRANSFORM    0.7610 -0.6353  0.1316  0.5927  0.7633  0.2572  0.2638  0.1178 -0.9574    -3.937   -56.850    49.918              
         T  <A  34   THR    > matches  <A  58   THR    >                        (  8.5 A from    O4  FK5 A 301  )
         K  <A  60   LYS    > matches  <A  66   LYS    >                        ( 10.1 A from    O4  FK5 A 301  )
         E  <A 124   GLU    > matches  <A  40   GLU    >                        ( 21.9 A from    C4  FK5 A 301  )
 
KERBm  3*FOUND in 5fsh  size =    3  ^    CSM6;                                                   #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.0664  0.7573 -0.6497 -0.9289  0.1909  0.3174 -0.3644 -0.6246 -0.6907    45.393   -26.264    81.167              
         T  <A  34   THR    > matches  <A 178   THR    >                        ( 20.2 A from   NI    NI A1465  )
         K  <A  60   LYS    > matches  <A 180   LYS    >                        ( 21.7 A from   NI    NI A1465  )
         E  <A 124   GLU    > matches  <A  13   GLU    >                        ( 20.6 A from   NI    NI A1465  )
 
KERBm  3*FOUND in 1nkg  size =    3  ^    RHAMNOGALACTURONASE B;                                  #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.5929 -0.7799  0.2006  0.6784  0.6180  0.3973  0.4338  0.0995 -0.8955    25.481   -29.654    36.760              
         T  <A  34   THR    > matches  <A  72   THR    >                        ( 22.8 A from    O3  SO4 A 904  )
         K  <A  60   LYS    > matches  <A  70   LYS    >                        ( 27.3 A from    O4  SO4 A 901  )
         E  <A 124   GLU    > matches  <A 100   GLU    >                        ( 15.2 A from    O3  SO4 A 904  )
 
KERBm  3*FOUND in 1n6e  size =    3  ^    TRICORN PROTEASE;                                       #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.8800  0.1703 -0.4434  0.4740 -0.3729  0.7976  0.0295  0.9121  0.4089    40.699     8.195    85.532              
         T  <A  34   THR    > matches  <A 268   THR    > 
         K  <A  60   LYS    > matches  <A 266   LYS    > 
         E  <A 124   GLU    > matches  <A 307   GLU    > 
 
KERBm  3*FOUND in 3wfa  size =    3  ^    ALPHA-GLUCOSIDASE;                                      #    2                            
  RMSD =     1.42 A
  TRANSFORM   -0.7820 -0.2812 -0.5563  0.4010 -0.9102 -0.1035  0.4772  0.3040 -0.8245    45.148    -8.047    19.203              
         T  <A  34   THR    > matches  <A 270   THR    >                        ( 17.3 A from    O18 EDT A 802  )
         K  <A  60   LYS    > matches  <A 277   LYS    >                        ( 21.9 A from    O18 EDT A 802  )
         E  <A 124   GLU    > matches  <A 526   GLU    >                        ( -2.6 A from   NA    NA A 801s )
 
KERBm  3*FOUND in 3q9k  size =    3  ^    LACTOPEROXIDASE;                                        #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.3823  0.2113  0.8995 -0.7077  0.5590 -0.4321  0.5941  0.8018  0.0642    14.365    30.998     5.182              
         T  <A  34   THR    > matches  <A 469   THR    >                        (  7.9 A from    I   IOD A 623  )
         K  <A  60   LYS    > matches  <A 465   LYS    >                        (  9.4 A from    I   IOD A 623  )
         E  <A 124   GLU    > matches  <A 503   GLU    >                        (  9.0 A from    I   IOD A 609  )
 
KERBm  3*FOUND in 5jxg  size =    3  ^    FURIN;                                                  #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.0122  0.4667  0.8843  0.2408  0.8570 -0.4556  0.9705 -0.2185  0.1019    38.809    30.164   -40.771              
         T  <A  34   THR    > matches  <A 554   THR    >                        ( 17.9 A from   CA    CA A 603  )
         K  <A  60   LYS    > matches  <A 463   LYS    >                        ( 24.5 A from   NA    NA A 609  )
         E  <A 124   GLU    > matches  <A 299   GLU    >                        ( 10.7 A from   CA    CA A 603  )
 
KERBm  3*FOUND in 4mad  size =    3  ^    BETA-GALACTOSIDASE;                                     #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.0978 -0.9731 -0.2087 -0.7038  0.0806 -0.7058 -0.7036 -0.2159  0.6770     4.835    -5.009    52.622              
         T  <A  34   THR    > matches  <A 110   THR    >                        ( 18.4 A from    O2  PG0 A 901  )
         K  <A  60   LYS    > matches  <A 374   LYS    >                        ( 20.8 A from    O2  PG0 A 901  )
         E  <A 124   GLU    > matches  <A 155   GLU    >                        ( 13.1 A from    C5  PG0 A 900  )
 
KERBm  3*FOUND in 4imi  size =    3  ^    SYMPLEKIN;                                              #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.1587 -0.7689  0.6193  0.9871 -0.1358  0.0844 -0.0192 -0.6247 -0.7806    50.054    39.576    73.814              
         T  <A  34   THR    > matches  <A 311   THR    > 
         K  <A  60   LYS    > matches  <A 270   LYS    > 
         E  <A 124   GLU    > matches  <A 337   GLU    > 
 
KERBm  3*FOUND in 1hwt  size =    3  ^    DNA (5'-                                                #    1                            
  RMSD =     1.42 A
  TRANSFORM    0.7629  0.4146 -0.4960 -0.5961  0.7481 -0.2916 -0.2501 -0.5181 -0.8179    22.302    -4.531    75.739              
         T  <A  34   THR    > matches  <C  99   THR    >                        ( 19.6 A from   ZN    ZN C 136  )
         K  <A  60   LYS    > matches  <C  59+  LYS    >                        ( 16.5 A from   ZN    ZN C 136  )
         E  <A 124   GLU    > matches  <C 113   GLU    >                        ( 28.9 A from   ZN    ZN C 137  )
 
KERBm  3*FOUND in 3ehh  size =    3  ^    SENSOR KINASE (YOCF PROTEIN);                           #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.5998 -0.5055 -0.6202 -0.6155 -0.2037  0.7613  0.5112 -0.8384  0.1890    69.115    -8.075    62.829              
         T  <A  34   THR    > matches  <A 292   THR    >                        (  6.0 A from   CA    CA A   1  )
         K  <A  60   LYS    > matches  <A 296   LYS    >                        (  6.7 A from   CA    CA A   1  )
         E  <A 124   GLU    > matches  <A 280   GLU    >                        ( 23.0 A from   CA    CA A   1  )
 
KERBm  3*FOUND in 3sy8  size =    3  ^    ROCR;                                                   #    2                            
  RMSD =     1.42 A
  TRANSFORM    0.8246  0.0679 -0.5616  0.1825  0.9077  0.3778 -0.5354  0.4140 -0.7361   -52.139   -52.820     6.080              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 16.6 A from   MG    MG A 401  )
         K  <A  60   LYS    > matches  <A 220   LYS    >                        ( 22.9 A from   MG    MG A 401  )
         E  <A 124   GLU    > matches  <A 352   GLU    >                        (  4.9 A from   MG    MG A 401  )
 
KERBm  3*FOUND in 5k1a  size =    3  ^    UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12;               #    1                            
  RMSD =     1.42 A
  TRANSFORM   -0.0727 -0.7805 -0.6209 -0.9923 -0.0061  0.1238  0.1004 -0.6251  0.7741    36.393   -29.623   -92.048              
         T  <A  34   THR    > matches  <B 320   THR    >                        ( 20.3 A from   ZN    ZN A 401  )
         K  <A  60   LYS    > matches  <B 358   LYS    >                        ( 21.9 A from   ZN    ZN A 401  )
         E  <A 124   GLU    > matches  <B 253   GLU    >                        ( 12.9 A from   ZN    ZN A 401  )
 
KERBm  3*FOUND in 1im5  size =    3  ^    180AA LONG HYPOTHETICAL PYRAZINAMIDASE/NICOTINAMIDA     #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.0144 -0.5201  0.8540  0.8764  0.4177  0.2397  0.4814 -0.7450 -0.4618    41.596   -15.836    33.398              
         T  <A  34   THR    > matches  <A  50   THR    >                        ( 11.3 A from   ZN    ZN A 400  )
         K  <A  60   LYS    > matches  <A  94   LYS    >                        (  5.8 A from   ZN    ZN A 400  )
         E  <A 124   GLU    > matches  <A  35   GLU    >                        ( 28.3 A from   ZN    ZN A 400  )
 
KERBm  3*FOUND in 2a6h  size =    3  ^    DNA-DIRECTED RNA POLYMERASE ALPHA CHAIN;                #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.9603  0.1611  0.2277  0.0462  0.7131 -0.6995  0.2750 -0.6823 -0.6774    19.242  -122.878    95.832              
         T  <A  34   THR    > matches  <A 196   THR    >                        ( 47.3 A from   MG    MG D9001  )
         K  <A  60   LYS    > matches  <A 194   LYS    >                        ( 52.4 A from   MG    MG D9001  )
         E  <A 124   GLU    > matches  <A  19   GLU    >                        ( 47.3 A from   MG    MG D9001  )
 
KERBm  3*FOUND in 1n62  size =    3  ^    CARBON MONOXIDE DEHYDROGENASE SMALL CHAIN;              #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.4075 -0.6639 -0.6271 -0.5921  0.3307 -0.7349 -0.6952 -0.6708  0.2584   146.380   120.188   125.884              
         T  <A  34   THR    > matches  <B 195   THR    >                        ( 30.2 A from   CU   CUB B3921  )
         K  <A  60   LYS    > matches  <B 198   LYS    >                        ( 35.3 A from   CU   CUB B3921  )
         E  <A 124   GLU    > matches  <B 400   GLU    >                        ( 19.1 A from   CU   CUB B3921  )
 
KERBm  3*FOUND in 2aqx  size =    3  ^    PREDICTED: INOSITOL 1,4,5-TRISPHOSPHATE 3-KINASE B;     #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.8916  0.3215  0.3187  0.1923  0.3685 -0.9095  0.4099 -0.8723 -0.2668    22.803   -17.200    57.083              
         T  <A  34   THR    > matches  <A 798   THR    >                        ( 19.8 A from    O2G ATP A1462  )
         K  <A  60   LYS    > matches  <A 827   LYS    >                        ( 20.9 A from    O3G ATP A1462  )
         E  <A 124   GLU    > matches  <A 780   GLU    >                        ( 33.9 A from    O2G ATP A1462  )
 
KERBm  3*FOUND in 1kqf  size =    3  ^    FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUB     #    4                            
  RMSD =     1.43 A
  TRANSFORM   -0.6011  0.7402  0.3011  0.1001  0.4436 -0.8906  0.7928  0.5052  0.3408   -49.418    52.334   -46.165              
         T  <A  34   THR    > matches  <A 898   THR    >                        ( -5.0 A from    N19 MGD A1019s )
         K  <A  60   LYS    > matches  <A  94   LYS    >                        (  3.1 A from    N19 MGD A1019s )
         E  <A 124   GLU    > matches  <B  92   GLU    >                        ( 16.4 A from   FE1  SF4 B 805  )
 
KERBm  3*FOUND in 4xq7  size =    3  ^    2'-5'-OLIGOADENYLATE SYNTHASE-LIKE PROTEIN;             #    1                            
  RMSD =     1.43 A
  TRANSFORM   -0.0248  0.7475  0.6638  0.4883 -0.5704  0.6605 -0.8723 -0.3405  0.3508   -39.003   -31.950    51.205              
         T  <A  34   THR    > matches  <A  74   THR    >                        ( 17.8 A from    O   CME A 188  )
         K  <A  60   LYS    > matches  <A 207   LYS    >                        ( 19.3 A from    O   CME A 188  )
         E  <A 124   GLU    > matches  <A 129   GLU    >                        ( 18.0 A from    H2  CME A 188  )
 
KERBm  3*FOUND in 4qnn  size =    3  ^    PHOSPHOLIPASE A 1  FROM HORNET(VESPA BASALIS) VENOM     #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.6310 -0.4019 -0.6636  0.5906 -0.3057  0.7468  0.5030  0.8631 -0.0445    22.796   -23.195    36.571              
         T  <A  34   THR    > matches  <A 237   THR    >                        (  8.2 A from   CL    CL A 403  )
         K  <A  60   LYS    > matches  <A 241   LYS    >                        ( -4.3 A from   CL    CL A 404s )
         E  <A 124   GLU    > matches  <A 225   GLU    >                        ( 24.8 A from   CL    CL A 403  )
 
KERBm  3*FOUND in 3owa  size =    3  ^    ACYL-COA DEHYDROGENASE;                                 #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.5552  0.6903 -0.4638 -0.8311  0.4399 -0.3402  0.0308 -0.5744 -0.8180    13.602    -9.170     3.612              
         T  <A  34   THR    > matches  <A  26   THR    >                        ( 19.5 A from    C12 1PE A 602  )
         K  <A  60   LYS    > matches  <A 512   LYS    >                        ( 23.3 A from    C12 1PE A 602  )
         E  <A 124   GLU    > matches  <A  42   GLU    >                        ( 17.8 A from    O1  GOL A 604  )
 
KERBm  3*FOUND in 3tek  size =    3  ^    THERMODBP-SINGLE STRANDED DNA BINDING PROTEIN;          #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.5806 -0.3966 -0.7110  0.5532 -0.4486  0.7020  0.5974  0.8009  0.0411     6.430    -4.572    21.521              
         T  <A  34   THR    > matches  <A  88   THR    > 
         K  <A  60   LYS    > matches  <A  84   LYS    > 
         E  <A 124   GLU    > matches  <A 102   GLU    > 
 
KERBm  3*FOUND in 5fxu  size =    3  ^    ENVELOPE POLYPROTEIN;                                   #    2                            
  RMSD =     1.43 A
  TRANSFORM   -0.8676 -0.1223  0.4820 -0.1992 -0.8027 -0.5621 -0.4557  0.5837 -0.6720     8.363    39.255    63.132              
         T  <A  34   THR    > matches  <A  86   THR    >                        ( 11.8 A from    C8  NAG A1382  )
         K  <A  60   LYS    > matches  <A 107   LYS    >                        ( 14.6 A from    C8  NAG A1382  )
         E  <A 124   GLU    > matches  <A  50   GLU    >                        (  9.8 A from    O6  NAG A1382  )
 
KERBm  3*FOUND in 2veq  size =    3  ^    CENTROMERE DNA-BINDING PROTEIN COMPLEX CBF3 SUBUNIT     #    1                            
  RMSD =     1.43 A
  TRANSFORM   -0.2563 -0.9665  0.0106 -0.4636  0.1133 -0.8787 -0.8481  0.2301  0.4772    37.746    80.625     2.195              
         T  <A  34   THR    > matches  <A 409   THR    >                        ( 13.4 A from    C2  CAC A1610  )
         K  <A  60   LYS    > matches  <A 413   LYS    >                        ( 15.6 A from    C2  CAC A1610  )
         E  <A 124   GLU    > matches  <A 389   GLU    >                        ( 20.5 A from    C2  CAC A1610  )
 
KERBm  3*FOUND in 3m6i  size =    3  ^    L-ARABINITOL 4-DEHYDROGENASE;                           #    1                            
  RMSD =     1.43 A
  TRANSFORM   -0.3027 -0.2075  0.9302  0.3824 -0.9204 -0.0809 -0.8730 -0.3312 -0.3580    34.946   -45.265    49.918              
         T  <A  34   THR    > matches  <A 229   THR    >                        ( 11.6 A from    C2A NAD A 501  )
         K  <A  60   LYS    > matches  <A 221   LYS    >                        ( 17.3 A from    C2A NAD A 501  )
         E  <A 124   GLU    > matches  <A 239   GLU    >                        ( 16.6 A from    N1A NAD A 501  )
 
KERBm  3*FOUND in 1k32  size =    3  ^    TRICORN PROTEASE;                                       #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.8851  0.1348 -0.4454  0.4595 -0.4049  0.7905  0.0738  0.9044  0.4203    39.522     6.302    86.544              
         T  <A  34   THR    > matches  <A 268   THR    > 
         K  <A  60   LYS    > matches  <A 266   LYS    > 
         E  <A 124   GLU    > matches  <A 307   GLU    > 
 
KERBm  3*FOUND in 2ywb  size =    3  ^    GMP SYNTHASE [GLUTAMINE-HYDROLYZING];                   #    1                            
  RMSD =     1.43 A
  TRANSFORM   -0.0459 -0.5290 -0.8474  0.0176  0.8477 -0.5301 -0.9988  0.0392  0.0296    86.216    -6.911    -4.974              
         T  <A  34   THR    > matches  <A 499   THR    > 
         K  <A  60   LYS    > matches  <A 495   LYS    > 
         E  <A 124   GLU    > matches  <A 282   GLU    > 
 
KERBm  3*FOUND in 1i1r  size =    3  ^    INTERLEUKIN-6 RECEPTOR BETA CHAIN;                      #    1                            
  RMSD =     1.43 A
  TRANSFORM   -0.1650  0.9498  0.2658  0.0837 -0.2550  0.9633 -0.9827 -0.1811  0.0374    11.986   -24.130    32.149              
         T  <A  34   THR    > matches  <A 221   THR    > 
         K  <A  60   LYS    > matches  <A 219   LYS    > 
         E  <A 124   GLU    > matches  <A 116   GLU    > 
 
KERBm  3*FOUND in 4i6m  size =    3  ^    ACTIN-RELATED PROTEIN 7;                                #    1                            
  RMSD =     1.43 A
  TRANSFORM   -0.8063  0.1027  0.5825  0.3827 -0.6604  0.6461 -0.4510 -0.7439 -0.4932    14.015   -50.626   114.537              
         T  <A  34   THR    > matches  <B 405   THR    >                        ( 12.4 A from    O1  PO4 B 506  )
         K  <A  60   LYS    > matches  <B 327   LYS    >                        ( 14.7 A from    O1  PO4 B 506  )
         E  <A 124   GLU    > matches  <B 364   GLU    >                        ( 15.9 A from    O1  PO4 B 506  )
 
KERBm  3*FOUND in 3ucp  size =    3  ^    UNDA;                                                   #    2                            
  RMSD =     1.43 A
  TRANSFORM    0.0253 -0.9625  0.2703  0.1030 -0.2664 -0.9583 -0.9944 -0.0521 -0.0924    42.296    51.885    43.815              
         T  <A  34   THR    > matches  <A 240   THR    >                        ( 15.2 A from    O1A HEC A 903  )
         K  <A  60   LYS    > matches  <A 238   LYS    >                        ( 21.5 A from    O1A HEC A 903  )
         E  <A 124   GLU    > matches  <A 454   GLU    >                        ( 10.9 A from    CMB HEC A 903  )
 
KERBm  3*FOUND in 2f8l  size =    3  ^    HYPOTHETICAL PROTEIN LMO1582;                           #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.2852 -0.7106  0.6432 -0.0505  0.6590  0.7505  0.9571  0.2465 -0.1520   -19.468   -57.458   -30.598              
         T  <A  34   THR    > matches  <A   6   THR    >                        ( 15.3 A from   CL    CL A 333  )
         K  <A  60   LYS    > matches  <A   2+  LYS    >                        ( 16.0 A from   CL    CL A 333  )
         E  <A 124   GLU    > matches  <A  37   GLU    >                        ( 16.8 A from    OXT SAM A 400  )
 
KERBm  3*FOUND in 3whr  size =    3  ^    GAMMA-GLUTAMYLTRANSPEPTIDASE LARGE CHAIN;               #    1                            
  RMSD =     1.43 A
  TRANSFORM   -0.0715  0.9789 -0.1915 -0.7399 -0.1809 -0.6480  0.6689 -0.0954 -0.7372    16.002   -32.519    53.742              
         T  <A  34   THR    > matches  <A 140   THR    > 
         K  <A  60   LYS    > matches  <A 197   LYS    > 
         E  <A 124   GLU    > matches  <A 128   GLU    > 
 
KERBm  3*FOUND in 4c12  size =    3  ^    UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE     #    1                            
  RMSD =     1.43 A
  TRANSFORM    0.7332 -0.4200  0.5348 -0.6598 -0.6294  0.4104 -0.1642  0.6538  0.7386   -57.316    44.868    -8.583              
         T  <A  34   THR    > matches  <A 109   THR    >                        (  3.7 A from    CD  KCX A 219  )
         K  <A  60   LYS    > matches  <A 114   LYS    >                        (  2.7 A from    O1B ADP A1499s )
         E  <A 124   GLU    > matches  <A 228   GLU    >                        ( 14.6 A from    O   KCX A 219  )
 
KERBm  3*FOUND in 5kpg  size =    3  ^    PAVINE N-METHYLTRANSFERASE;                             #    1                            
  RMSD =     1.43 A
  TRANSFORM   -0.0834 -0.2207 -0.9718 -0.8965 -0.4093  0.1699  0.4352 -0.8853  0.1637    18.133     9.512    35.919              
         T  <A  34   THR    > matches  <A 155   THR    >                        ( 13.0 A from    C2  SAH A 401  )
         K  <A  60   LYS    > matches  <A 153   LYS    >                        ( 16.8 A from    C2  SAH A 401  )
         E  <A 124   GLU    > matches  <A  80   GLU    >                        (  9.8 A from    O2' SAH A 401  )
 
KERBm  3*FOUND in 5wv9  size =    3  ^    CHITINASE;                                              #    3                            
  RMSD =     1.43 A
  TRANSFORM   -0.2715 -0.0433  0.9615 -0.7661  0.6144 -0.1887  0.5826  0.7878  0.2000    -7.229   -28.592     1.541              
         T  <A  34   THR    > matches  <A 180   THR    >                        ( 11.9 A from    O6  NAG A 502  )
         K  <A  60   LYS    > matches  <A 184   LYS    >                        ( 17.5 A from    O7  NAG A 503  )
         E  <A 124   GLU    > matches  <A 370   GLU    >                        (  2.8 A from    C8  NAG A 502s )
 
KERBm  3*FOUND in 1ecl  size =    3  ^    ESCHERICHIA COLI TOPOISOMERASE I;                       #    3                            
  RMSD =     1.43 A
  TRANSFORM    0.4514  0.7784  0.4363  0.6003  0.0969 -0.7939  0.6603 -0.6202  0.4235   -14.470   -21.582    17.365              
         T  <A  34   THR    > matches  <A 277   THR    > 
         K  <A  60   LYS    > matches  <A 279   LYS    > 
         E  <A 124   GLU    > matches  <A 270   GLU    > 
 
KERBm  3*FOUND in 5exe  size =    3  ^    OXALATE OXIDOREDUCTASE SUBUNIT ALPHA;                   #    2                            
  RMSD =     1.44 A
  TRANSFORM   -0.3364  0.0943  0.9370 -0.2768  0.9411 -0.1941  0.9001  0.3247  0.2905   -18.316   -28.142    27.517              
         T  <A  34   THR    > matches  <C 161   THR    >                        ( 13.5 A from   MG    MG C 403  )
         K  <A  60   LYS    > matches  <C 171   LYS    >                        ( 12.4 A from   MG    MG C 403  )
         E  <A 124   GLU    > matches  <B  50   GLU    >                        ( 14.6 A from    S2  SF4 C 401  )
 
KERBm  3*FOUND in 3pqa  size =    3  ^    LACTALDEHYDE DEHYDROGENASE;                             #    1                            
  RMSD =     1.44 A
  TRANSFORM   -0.1257  0.9672 -0.2206  0.4496  0.2538  0.8564 -0.8843 -0.0084  0.4668   -17.716   -41.580     0.743              
         T  <A  34   THR    > matches  <A 391   THR    >                        ( 23.3 A from    O2  SO4 A 488  )
         K  <A  60   LYS    > matches  <A 366   LYS    >                        ( 27.2 A from    O3  SO4 A 487  )
         E  <A 124   GLU    > matches  <A 412   GLU    >                        ( 32.0 A from    O3  SO4 A 488  )
 
KERBm  3*FOUND in 3rq4  size =    3  ^    HISTONE-LYSINE N-METHYLTRANSFERASE SUV420H2;            #    1                            
  RMSD =     1.44 A
  TRANSFORM   -0.0345 -0.3768 -0.9257  0.9210  0.3476 -0.1759 -0.3880  0.8586 -0.3350   106.910   -17.604    43.241              
         T  <A  34   THR    > matches  <A  19   THR    >                        (  8.9 A from   UNK  UNX A2206  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        (  5.6 A from   UNK  UNX A2206  )
         E  <A 124   GLU    > matches  <A 103   GLU    >                        (  5.6 A from   UNK  UNX A2207  )
 
KERBm  3*FOUND in 2c5s  size =    3  ^    PROBABLE THIAMINE BIOSYNTHESIS PROTEIN THII;            #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.0243  0.1230 -0.9921  0.9714 -0.2374 -0.0056  0.2362  0.9636  0.1253    89.989   -10.882   -70.076              
         T  <A  34   THR    > matches  <A 245   THR    >                        ( 12.2 A from    N6  AMP A1392  )
         K  <A  60   LYS    > matches  <A 249   LYS    >                        ( 16.8 A from    N6  AMP A1392  )
         E  <A 124   GLU    > matches  <A 278   GLU    >                        ( 16.0 A from    C2  AMP A1392  )
 
KERBm  3*FOUND in 4fem  size =    3  ^    OUTER MEMBRANE PROTEIN SUSE;                            #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.3756  0.9086 -0.1828  0.3893  0.0243  0.9208 -0.8411  0.4170  0.3446    -3.946   -97.384   -16.581              
         T  <A  34   THR    > matches  <A 279   THR    >                        ( 15.4 A from    O1  EDO A 403  )
         K  <A  60   LYS    > matches  <A 242   LYS    >                        ( 16.3 A from    O1  EDO A 403  )
         E  <A 124   GLU    > matches  <A 228   GLU    >                        ( 10.7 A from    O2A ACX A 401  )
 
KERBm  3*FOUND in 5xne  size =    3  ^    ALPHA-ACETOLACTATE DECARBOXYLASE;                       #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.8801 -0.4507  0.1494 -0.3315 -0.8085 -0.4862 -0.3399 -0.3784  0.8610    18.362     1.369    64.254              
         T  <A  34   THR    > matches  <A  94   THR    >                        ( 15.9 A from   ZN    ZN A 301  )
         K  <A  60   LYS    > matches  <A  19+  LYS    >                        ( 22.0 A from   ZN    ZN A 301  )
         E  <A 124   GLU    > matches  <A  62   GLU    >                        (  4.5 A from   ZN    ZN A 301  )
 
KERBm  3*FOUND in 3wwh  size =    3  ^    (R)-AMINE TRANSAMINASE;                                 #    1                            
  RMSD =     1.44 A
  TRANSFORM   -0.8757  0.1295 -0.4651 -0.4235  0.2568  0.8688 -0.2320 -0.9578  0.1700    41.103   -30.862    29.572              
         T  <A  34   THR    > matches  <A  68   THR    >                        (  6.5 A from    O3P PLP A 401  )
         K  <A  60   LYS    > matches  <A 188   LYS    >                        (  1.7 A from    C4A PLP A 401s )
         E  <A 124   GLU    > matches  <A 111   GLU    >                        ( 23.5 A from    O1  GOL A 402  )
 
KERBm  3*FOUND in 3qfe  size =    3  ^    PUTATIVE DIHYDRODIPICOLINATE SYNTHASE FAMILY PROTEI     #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.3851  0.5999  0.7013 -0.3444  0.7984 -0.4939  0.8562  0.0514 -0.5141    56.339    23.373     2.418              
         T  <A  34   THR    > matches  <A  16   THR    >                        ( 13.1 A from   CL    CL A 318  )
         K  <A  60   LYS    > matches  <A 262   LYS    >                        ( 16.8 A from   CL    CL A 318  )
         E  <A 124   GLU    > matches  <A  93   GLU    >                        ( 22.8 A from   CL    CL A 318  )
 
KERBm  3*FOUND in 3csk  size =    3  ^    PROBABLE DIPEPTIDYL-PEPTIDASE 3;                        #    3                            
  RMSD =     1.44 A
  TRANSFORM    0.4975 -0.4116 -0.7636  0.6146 -0.4540  0.6451  0.6122  0.7903 -0.0271    32.790     6.154     9.558              
         T  <A  34   THR    > matches  <A 691   THR    >                        ( 37.3 A from   ZN    ZN A 712  )
         K  <A  60   LYS    > matches  <A 689   LYS    >                        ( 37.8 A from   ZN    ZN A 712  )
         E  <A 124   GLU    > matches  <A 697   GLU    >                        ( 27.0 A from   ZN    ZN A 712  )
 
KERBm  3*FOUND in 5jkq  size =    3  ^    PFVFT1;                                                 #    1                            
  RMSD =     1.44 A
  TRANSFORM   -0.7221  0.0400 -0.6907 -0.2713 -0.9347  0.2295  0.6364 -0.3531 -0.6858     7.004    15.948    14.594              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 29.8 A from    O1  SO4 A 401  )
         K  <A  60   LYS    > matches  <A 134   LYS    >                        ( 33.2 A from    O1  SO4 A 401  )
         E  <A 124   GLU    > matches  <A  66   GLU    >                        ( 31.6 A from    O1  SO4 A 401  )
 
KERBm  3*FOUND in 3iab  size =    3  ^    RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP6;               #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.7194  0.5449 -0.4307  0.3484 -0.8195 -0.4550  0.6009 -0.1773  0.7794    16.869    56.078   -27.446              
         T  <A  34   THR    > matches  <A 116   THR    >                        ( 35.4 A from   ZN    ZN B 143  )
         K  <A  60   LYS    > matches  <A 114   LYS    >                        ( 34.2 A from   ZN    ZN B 143  )
         E  <A 124   GLU    > matches  <A 131   GLU    >                        ( 36.4 A from   ZN    ZN B 143  )
 
KERBm  3*FOUND in 1p2f  size =    3  ^    RESPONSE REGULATOR;                                     #    1                            
  RMSD =     1.44 A
  TRANSFORM   -0.2896 -0.2814  0.9148 -0.5160 -0.7591 -0.3968 -0.8062  0.5869 -0.0746    -5.443    54.669    17.070              
         T  <A  34   THR    > matches  <A 216   THR    > 
         K  <A  60   LYS    > matches  <A 206   LYS    > 
         E  <A 124   GLU    > matches  <A 118   GLU    > 
 
KERBm  3*FOUND in 2p1w  size =    3  ^    27.5 KDA VIRULENCE PROTEIN;                             #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.0304 -0.5071 -0.8614 -0.9845 -0.1641  0.0618  0.1727 -0.8461  0.5042    68.286     5.270    16.467              
         T  <A  34   THR    > matches  <A 156   THR    > 
         K  <A  60   LYS    > matches  <A 104   LYS    > 
         E  <A 124   GLU    > matches  <A 141   GLU    > 
 
KERBm  3*FOUND in 2jke  size =    3  ^    ALPHA-GLUCOSIDASE (ALPHA-GLUCOSIDASE SUSB);             #    1                            
  RMSD =     1.44 A
  TRANSFORM   -0.7016 -0.4607 -0.5435  0.5885 -0.8048 -0.0775  0.4017  0.3743 -0.8358    84.883    32.709    54.929              
         T  <A  34   THR    > matches  <A 270   THR    >                        ( 13.8 A from    O1  EDO A1732  )
         K  <A  60   LYS    > matches  <A 277   LYS    >                        ( 20.3 A from    O1  EDO A1732  )
         E  <A 124   GLU    > matches  <A 526   GLU    >                        (  2.8 A from   CA    CA A1728s )
 
KERBm  3*FOUND in 1q32  size =    3  ^    TYROSYL-DNA PHOSPHODIESTERASE;                          #    2                            
  RMSD =     1.44 A
  TRANSFORM   -0.2374 -0.5253 -0.8172  0.9711 -0.1500 -0.1856  0.0251  0.8376 -0.5457   -20.947   -19.716    19.433              
         T  <A  34   THR    > matches  <A 310   THR    > 
         K  <A  60   LYS    > matches  <A 434   LYS    > 
         E  <A 124   GLU    > matches  <A 405   GLU    > 
 
KERBm  3*FOUND in 2vyc  size =    3  ^    BIODEGRADATIVE ARGININE DECARBOXYLASE;                  #    1                            
  RMSD =     1.44 A
  TRANSFORM   -0.3065 -0.7175  0.6255 -0.9163  0.0445 -0.3980 -0.2578  0.6952  0.6711    80.243   149.821    49.111              
         T  <A  34   THR    > matches  <A 664   THR    >                        ( 21.2 A from    N1  PLP A1386  )
         K  <A  60   LYS    > matches  <A 268   LYS    >                        ( 24.4 A from    N1  PLP A1386  )
         E  <A 124   GLU    > matches  <A 678   GLU    >                        ( 31.7 A from    C5A PLP A1386  )
 
KERBm  3*FOUND in 5fno  size =    3  ^    MANGANESE LIPOXYGENASE;                                 #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.2349  0.9630  0.1324  0.9462 -0.2577  0.1959 -0.2227 -0.0793  0.9716   -46.765   -12.691   -22.851              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( 23.9 A from    C8  NAG A1011  )
         K  <A  60   LYS    > matches  <A 110   LYS    >                        ( 22.7 A from    C8  NAG A1002  )
         E  <A 124   GLU    > matches  <A  94   GLU    >                        ( 18.4 A from   MN    MN A 606  )
 
KERBm  3*FOUND in 5l3s  size =    3  ^    SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN;             #    3                            
  RMSD =     1.44 A
  TRANSFORM    0.9088 -0.1289  0.3968  0.3774  0.6596 -0.6500  0.1780 -0.7405 -0.6481    15.866    23.330    54.759              
         T  <A  34   THR    > matches  <A 250   THR    >                        ( 10.9 A from    N2  GNP A 301  )
         K  <A  60   LYS    > matches  <A 252   LYS    >                        ( 10.0 A from    O1  GOL A 305  )
         E  <A 124   GLU    > matches  <B 275   GLU    >                        (  6.3 A from    O4  SO4 B 408  )
 
KERBm  3*FOUND in 4odi  size =    3  ^    PHOSPHOGLYCERATE MUTASE PGMII;                          #    2                            
  RMSD =     1.44 A
  TRANSFORM    0.7125 -0.5721  0.4062 -0.4356 -0.8145 -0.3832 -0.5501 -0.0961  0.8296     1.144    24.372    33.397              
         T  <A  34   THR    > matches  <A 225   THR    >                        ( 29.9 A from   NA    NA A 301  )
         K  <A  60   LYS    > matches  <A 254   LYS    >                        ( 34.0 A from   NA    NA A 301  )
         E  <A 124   GLU    > matches  <A 167   GLU    >                        ( 14.6 A from   NA    NA A 301  )
 
KERBm  3*FOUND in 1ux5  size =    3  ^    BNI1 PROTEIN;                                           #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.1657  0.4701 -0.8669 -0.9037  0.4243  0.0574 -0.3948 -0.7739 -0.4952    50.697    14.648    61.321              
         T  <A  34   THR    > matches  <A1598   THR    > 
         K  <A  60   LYS    > matches  <A1601   LYS    > 
         E  <A 124   GLU    > matches  <A1718   GLU    > 
 
KERBm  3*FOUND in 1tyh  size =    3  ^    TRANSCRIPTIONAL ACTIVATOR TENA;                         #    1                            
  RMSD =     1.44 A
  TRANSFORM    0.5685  0.8226  0.0088  0.3165 -0.2088 -0.9253  0.7594 -0.5288  0.3791    -7.911    26.365    29.742              
         T  <A  34   THR    > matches  <A  49   THR    > 
         K  <A  60   LYS    > matches  <A  53   LYS    > 
         E  <A 124   GLU    > matches  <A  99   GLU    > 
 
KERBm  3*FOUND in 2v8q  size =    3  ^    5'-AMP-ACTIVATED PROTEIN KINASE CATALYTIC SUBUNIT A     #    1                            
  RMSD =     1.44 A
  TRANSFORM   -0.3793  0.8458 -0.3752 -0.2410  0.3012  0.9226 -0.8933 -0.4404 -0.0896     8.466   -57.845    48.262              
         T  <A  34   THR    > matches  <E  29   THR    >                        ( 19.5 A from    O3' AMP E1329  )
         K  <A  60   LYS    > matches  <E  33   LYS    >                        ( 22.6 A from    O3' AMP E1329  )
         E  <A 124   GLU    > matches  <E 194   GLU    >                        ( 18.9 A from    O2' AMP E1329  )
 
KERBm  3*FOUND in 5sui  size =    3  ^    RIBOSOME BIOGENESIS PROTEIN NSA1;                       #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.5682  0.1821 -0.8025  0.0220  0.9715  0.2360 -0.8226  0.1517 -0.5480    57.845   -56.945    50.765              
         T  <A  34   THR    > matches  <A 116   THR    > 
         K  <A  60   LYS    > matches  <A 179   LYS    > 
         E  <A 124   GLU    > matches  <A  20   GLU    > 
 
KERBm  3*FOUND in 3tb6  size =    3  ^    ARABINOSE METABOLISM TRANSCRIPTIONAL REPRESSOR;         #    2                            
  RMSD =     1.45 A
  TRANSFORM   -0.8341  0.5465 -0.0748 -0.1710 -0.3852 -0.9069  0.5244  0.7436 -0.4148     7.326    24.226    32.098              
         T  <A  34   THR    > matches  <A  81   THR    >                        ( 24.4 A from    O5  ARB A 400  )
         K  <A  60   LYS    > matches  <A  79+  LYS    >                        ( 28.6 A from    O5  ARB A 400  )
         E  <A 124   GLU    > matches  <A 142   GLU    >                        ( -4.4 A from    O5  ARB A 400s )
 
KERBm  3*FOUND in 1vjv  size =    3  ^    UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 6;                #    2                            
  RMSD =     1.45 A
  TRANSFORM    0.6107  0.6572  0.4418  0.5000  0.1126 -0.8587  0.6140 -0.7453  0.2599    -5.630    27.212    35.446              
         T  <A  34   THR    > matches  <A 240   THR    > 
         K  <A  60   LYS    > matches  <A 242   LYS    > 
         E  <A 124   GLU    > matches  <A 424   GLU    > 
 
KERBm  3*FOUND in 5i2a  size =    3  ^    DIOL-DEHYDRATASE;                                       #    2                            
  RMSD =     1.45 A
  TRANSFORM   -0.6209 -0.6978  0.3570 -0.3587 -0.1520 -0.9210 -0.6970  0.6999  0.1559   -28.444     6.593   -48.864              
         T  <A  34   THR    > matches  <A  38   THR    >                        (  0.8 A from    CB  THR A  38  )
         K  <A  60   LYS    > matches  <A  42   LYS    >                        (  0.0 A from    NZ  LYS A  42  )
         E  <A 124   GLU    > matches  <A  28   GLU    >                        (  0.6 A from    CD  GLU A  28  )
 
KERBm  3*FOUND in 4mza  size =    3  ^    HEMAGGLUTININ-NEURAMINIDASE;                            #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.2749  0.6036 -0.7484 -0.5550  0.7352  0.3891 -0.7851 -0.3084 -0.5371    25.379     1.886    39.140              
         T  <A  34   THR    > matches  <A 450   THR    >                        (  7.5 A from    O6  MAN A 605  )
         K  <A  60   LYS    > matches  <A 448   LYS    >                        (  9.3 A from    C8  NAG A 602  )
         E  <A 124   GLU    > matches  <A 518   GLU    >                        (  7.8 A from    O2  EDO A 615  )
 
KERBm  3*FOUND in 2jke  size =    3  ^    ALPHA-GLUCOSIDASE (ALPHA-GLUCOSIDASE SUSB);             #    3                            
  RMSD =     1.45 A
  TRANSFORM    0.8551  0.4936  0.1588 -0.0556  0.3918 -0.9184  0.5155 -0.7764 -0.3625   -16.909    74.648    74.096              
         T  <A  34   THR    > matches  <A 671   THR    >                        ( 22.6 A from    C1  EDO A1730  )
         K  <A  60   LYS    > matches  <A 674   LYS    >                        ( 28.6 A from    C1  EDO A1730  )
         E  <A 124   GLU    > matches  <A 119   GLU    >                        ( 11.3 A from    O1  EDO A1730  )
 
KERBm  3*FOUND in 5nc6  size =    3  ^    PEPTIDOGLYCAN N-ACETYLGLUCOSAMINE DEACETYLASE;          #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.0760  0.9893  0.1242  0.9885  0.0584  0.1392 -0.1305 -0.1333  0.9824    -4.987   -42.610  -109.294              
         T  <A  34   THR    > matches  <B 129   THR    >                        ( 11.3 A from   ZN    ZN B 302  )
         K  <A  60   LYS    > matches  <B 134   LYS    >                        ( 16.6 A from   ZN    ZN B 302  )
         E  <A 124   GLU    > matches  <B 116   GLU    >                        ( 13.0 A from    O02 8SQ B 301  )
 
KERBm  3*FOUND in 4cd8  size =    3  ^    ENDO-BETA-1,4-MANNANASE;                                #    2                            
  RMSD =     1.45 A
  TRANSFORM   -0.5580  0.8094  0.1830 -0.2333 -0.3647  0.9015 -0.7964 -0.4603 -0.3923    44.756    -5.636    16.935              
         T  <A  34   THR    > matches  <A  95   THR    >                        (  6.1 A from    O2  MVL A 400  )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        (  4.9 A from    O2  MVL A 400  )
         E  <A 124   GLU    > matches  <A 118   GLU    >                        ( 22.0 A from    O6  BMA A 401  )
 
KERBm  3*FOUND in 3g13  size =    3  ^    PUTATIVE CONJUGATIVE TRANSPOSON RECOMBINASE;            #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.3893  0.1995 -0.8993 -0.3896 -0.9203 -0.0355  0.8347 -0.3365 -0.4360    59.191    69.220   -31.762              
         T  <A  34   THR    > matches  <A  33   THR    >                        ( 45.2 A from    O2  GOL A 301  )
         K  <A  60   LYS    > matches  <A  37   LYS    >                        ( 48.6 A from    O2  GOL A 301  )
         E  <A 124   GLU    > matches  <A  51   GLU    >                        ( 31.1 A from    C3  GOL A 301  )
 
KERBm  3*FOUND in 4k6j  size =    3  ^    WINGS APART-LIKE PROTEIN HOMOLOG;                       #    2                            
  RMSD =     1.45 A
  TRANSFORM    0.0864 -0.9915 -0.0974 -0.1481 -0.1095  0.9829  0.9852  0.0705  0.1563    16.325   -37.346   -79.692              
         T  <A  34   THR    > matches  <A 706   THR    >                        ( 16.0 A from    O2  SO4 A1201  )
         K  <A  60   LYS    > matches  <A 666   LYS    >                        ( 20.4 A from    O2  SO4 A1201  )
         E  <A 124   GLU    > matches  <A 814   GLU    >                        (  5.3 A from    O1  SO4 A1201  )
 
KERBm  3*FOUND in 2i2c  size =    3  ^    PROBABLE INORGANIC POLYPHOSPHATE/ATP-NAD KINASE 1;      #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.3205 -0.9469 -0.0254  0.8525 -0.3000  0.4281  0.4129 -0.1156 -0.9034    45.541   -11.904    12.902              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( 19.4 A from    O3' DTA A 273  )
         K  <A  60   LYS    > matches  <A 108   LYS    >                        ( 25.6 A from    O3' DTA A 273  )
         E  <A 124   GLU    > matches  <A 177   GLU    >                        ( 12.3 A from    O1  PG4 A 301  )
 
KERBm  3*FOUND in 3ue3  size =    3  ^    SEPTUM FORMATION, PENICILLIN BINDING PROTEIN 3,         #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.1515  0.9010 -0.4065 -0.6963  0.3892  0.6031 -0.7016 -0.1917 -0.6863    12.410    -3.627   -17.131              
         T  <A  34   THR    > matches  <A 261   THR    > 
         K  <A  60   LYS    > matches  <A 479   LYS    > 
         E  <A 124   GLU    > matches  <A 255   GLU    > 
 
KERBm  3*FOUND in 4g8a  size =    3  ^    TOLL-LIKE RECEPTOR 4;                                   #    2                            
  RMSD =     1.45 A
  TRANSFORM   -0.2677  0.9290 -0.2557 -0.8623 -0.1127  0.4937 -0.4298 -0.3526 -0.8312     4.893    10.725   -63.312              
         T  <A  34   THR    > matches  <A 175   THR    >                        (  9.3 A from    C1  NAG A 701  )
         K  <A  60   LYS    > matches  <A 150   LYS    >                        (  5.5 A from    O6  NAG A 701  )
         E  <A 124   GLU    > matches  <A 254   GLU    >                        ( 27.2 A from    C8  NAG A 701  )
 
KERBm  3*FOUND in 3wfa  size =    3  ^    ALPHA-GLUCOSIDASE;                                      #    3                            
  RMSD =     1.45 A
  TRANSFORM   -0.9247 -0.3656 -0.1063 -0.2779  0.8389 -0.4681 -0.2603  0.4033  0.8773    64.177    27.916    -4.194              
         T  <A  34   THR    > matches  <A 697   THR    >                        ( 33.3 A from   NA    NA A 801  )
         K  <A  60   LYS    > matches  <A 699   LYS    >                        ( 37.3 A from   NA    NA A 801  )
         E  <A 124   GLU    > matches  <A 691   GLU    >                        ( 28.3 A from   NA    NA A 801  )
 
KERBm  3*FOUND in 3tbd  size =    3  ^    NETRIN-G2;                                              #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.7736  0.5958 -0.2157 -0.1277 -0.4801 -0.8679  0.6207  0.6438 -0.4475    -2.790    23.442     3.449              
         T  <A  34   THR    > matches  <A 107   THR    >                        (  7.6 A from    O5  NAG A 801  )
         K  <A  60   LYS    > matches  <A  36   LYS    >                        (  8.9 A from    O6  NAG A 801  )
         E  <A 124   GLU    > matches  <A 197   GLU    >                        ( 12.9 A from    O4  PO4 A 339  )
 
KERBm  3*FOUND in 5mtz  size =    3  ^    RIBONUCLEASE Z;                                         #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.9263  0.3225 -0.1949 -0.0121 -0.4913 -0.8709  0.3766 -0.8091  0.4511   -29.173    63.094    35.006              
         T  <A  34   THR    > matches  <A 335   THR    >                        ( 19.7 A from   ZN    ZN A 902  )
         K  <A  60   LYS    > matches  <A 338   LYS    >                        ( 26.0 A from    O2  PO4 A 903  )
         E  <A 124   GLU    > matches  <A 511   GLU    >                        ( 12.9 A from    O4  PO4 A 903  )
 
KERBm  3*FOUND in 6e12  size =    3  ^    ALR8543 PROTEIN;                                        #    2                            
  RMSD =     1.45 A
  TRANSFORM    0.5613  0.1122  0.8199  0.7430 -0.5047 -0.4396 -0.3645 -0.8560  0.3667   -47.837   -23.758    87.192              
         T  <A  34   THR    > matches  <A  43   THR    >                        (  7.6 A from    C17 OLA A 301  )
         K  <A  60   LYS    > matches  <A  46   LYS    >                        ( 11.4 A from    C18 OLA A 301  )
         E  <A 124   GLU    > matches  <A  19   GLU    >                        ( 13.3 A from    O1  OLA A 301  )
 
KERBm  3*FOUND in 6et8  size =    3  ^    ALBICIDIN RESISTANCE PROTEIN;                           #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.9484  0.2631  0.1768  0.1825  0.0028 -0.9832  0.2592 -0.9648  0.0453   -20.768    51.886    78.413              
         T  <A  34   THR    > matches  <A  54   THR    >                        ( 12.9 A from    O2  BWH A 301  )
         K  <A  60   LYS    > matches  <A 192   LYS    >                        ( 12.9 A from    C42 BWH A 301  )
         E  <A 124   GLU    > matches  <A  40   GLU    >                        ( 20.4 A from    C15 BWH A 301  )
 
KERBm  3*FOUND in 4hj1  size =    3  ^    ENVELOPE GLYCOPROTEIN;                                  #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.6750  0.5158 -0.5276  0.5698 -0.0899 -0.8168  0.4688  0.8520  0.2332   179.490   -70.323   -93.045              
         T  <A  34   THR    > matches  <A 860   THR    >                        ( 11.8 A from    O2  BMA A1205  )
         K  <A  60   LYS    > matches  <A 858   LYS    >                        ( 15.0 A from    O2  BMA A1205  )
         E  <A 124   GLU    > matches  <A1076   GLU    >                        ( 10.9 A from    C8  NAG A1203  )
 
KERBm  3*FOUND in 5k19  size =    3  ^    WD REPEAT-CONTAINING PROTEIN 20;                        #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.3357 -0.7745 -0.5362  0.8047  0.5317 -0.2641 -0.4896  0.3428 -0.8017   -23.275   -93.615   100.156              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 18.6 A from    O3  SO4 A 601  )
         K  <A  60   LYS    > matches  <A 215   LYS    >                        ( 15.3 A from    O3  SO4 A 601  )
         E  <A 124   GLU    > matches  <A 282   GLU    >                        ( 22.4 A from    O1  SO4 A 601  )
 
KERBm  3*FOUND in 3elq  size =    3  ^    ARYLSULFATE SULFOTRANSFERASE;                           #    3                            
  RMSD =     1.45 A
  TRANSFORM    0.3217  0.7884 -0.5243 -0.9450  0.2334 -0.2290  0.0582 -0.5692 -0.8202     9.404     3.900    44.831              
         T  <A  34   THR    > matches  <A  82   THR    >                        ( 11.1 A from   CL    CL A5002  )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        ( 12.4 A from   CL    CL A5002  )
         E  <A 124   GLU    > matches  <A 185   GLU    >                        (  7.8 A from    O1  SO4 A2007  )
 
KERBm  3*FOUND in 5u55  size =    3  ^    (S)-2-HYDROXYPROPYLPHOSPHONIC ACID EPOXIDASE;           #    3                            
  RMSD =     1.45 A
  TRANSFORM    0.1622 -0.7245  0.6699  0.9270 -0.1207 -0.3550 -0.3381 -0.6786 -0.6520    62.317   -16.639    33.965              
         T  <A  34   THR    > matches  <A  94   THR    >                        ( 11.6 A from    C2  S0H A 302  )
         K  <A  60   LYS    > matches  <A  82   LYS    >                        ( 15.7 A from    C2  S0H A 302  )
         E  <A 124   GLU    > matches  <A 119   GLU    >                        ( 20.5 A from    C1  S0H A 302  )
 
KERBm  3*FOUND in 1obb  size =    3  ^    ALPHA-GLUCOSIDASE;                                      #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.4506  0.4180  0.7888  0.5225  0.8400 -0.1467  0.7239 -0.3460  0.5969     2.108   -45.678   -10.842              
         T  <A  34   THR    > matches  <A 299   THR    >                        (  7.6 A from    O6' MAL A 900  )
         K  <A  60   LYS    > matches  <A 302   LYS    >                        ( 14.8 A from    O6' MAL A 900  )
         E  <A 124   GLU    > matches  <A 182   GLU    >                        (  8.6 A from    O2' MAL A 900  )
 
KERBm  3*FOUND in 4r9n  size =    3  ^    LMO0547 PROTEIN;                                        #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.9600 -0.0875 -0.2660  0.1196  0.9871  0.1068 -0.2532  0.1343 -0.9580    29.014   -21.621    32.975              
         T  <A  34   THR    > matches  <A 136   THR    > 
         K  <A  60   LYS    > matches  <A 169   LYS    > 
         E  <A 124   GLU    > matches  <A  75   GLU    > 
 
KERBm  3*FOUND in 1xm7  size =    3  ^    HYPOTHETICAL PROTEIN AQ_1665;                           #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.3524  0.6530 -0.6703 -0.8675 -0.4967 -0.0278  0.3512 -0.5717 -0.7415    39.299    75.879    69.787              
         T  <A  34   THR    > matches  <A  33   THR    > 
         K  <A  60   LYS    > matches  <A  37   LYS    > 
         E  <A 124   GLU    > matches  <A  13   GLU    > 
 
KERBm  3*FOUND in 4o68  size =    3  ^    CYCLIC GMP-AMP SYNTHASE;                                #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.3236  0.1143 -0.9393  0.6729  0.7257 -0.1435 -0.6652  0.6784  0.3117   -12.009     9.025     7.893              
         T  <A  34   THR    > matches  <A 309   THR    >                        ( 32.7 A from   ZN    ZN A 601  )
         K  <A  60   LYS    > matches  <A 299   LYS    >                        ( 34.4 A from   ZN    ZN A 601  )
         E  <A 124   GLU    > matches  <A 383   GLU    >                        ( 18.2 A from   ZN    ZN A 601  )
 
KERBm  3*FOUND in 4ar9  size =    3  ^    COLLAGENASE COLT;                                       #    2                            
  RMSD =     1.45 A
  TRANSFORM    0.7765  0.3267  0.5388  0.6077 -0.1624 -0.7774  0.1665 -0.9311  0.3246    38.107   -14.399    26.018              
         T  <A  34   THR    > matches  <A 411   THR    >                        ( 16.9 A from   CA    CA A1732  )
         K  <A  60   LYS    > matches  <A 367   LYS    >                        ( 23.6 A from   ZN    ZN A1731  )
         E  <A 124   GLU    > matches  <A 498   GLU    >                        (  7.7 A from   ZN    ZN A1731  )
 
KERBm  3*FOUND in 4kr6  size =    3  ^    PROBABLE TRNA SULFURTRANSFERASE;                        #    2                            
  RMSD =     1.45 A
  TRANSFORM    0.1080  0.9064  0.4084 -0.0561 -0.4046  0.9128 -0.9926  0.1215 -0.0072    29.991   -20.054    54.253              
         T  <A  34   THR    > matches  <A 278   THR    >                        ( 24.3 A from   HG    HG A 402  )
         K  <A  60   LYS    > matches  <A 176   LYS    >                        ( 24.2 A from   HG    HG A 401  )
         E  <A 124   GLU    > matches  <A 377   GLU    >                        ( 19.3 A from   HG    HG A 402  )
 
KERBm  3*FOUND in 1f0l  size =    3  ^    DIPHTHERIA TOXIN;                                       #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.8041 -0.5670  0.1787 -0.5944  0.7605 -0.2616 -0.0124  0.3165  0.9485    17.353   -18.497   -14.899              
         T  <A  34   THR    > matches  <A  42   THR    >                        ( -3.6 A from    O3X APU A 601s )
         K  <A  60   LYS    > matches  <A  51   LYS    >                        (  6.9 A from    O3X APU A 601  )
         E  <A 124   GLU    > matches  <A 298   GLU    >                        ( 12.4 A from   CL    CL A 704  )
 
KERBm  3*FOUND in 1kqf  size =    3  ^    FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUB     #    3                            
  RMSD =     1.45 A
  TRANSFORM    0.3619 -0.8506 -0.3815 -0.9288 -0.3638 -0.0700  0.0793 -0.3797  0.9217    99.864     6.573   -57.555              
         T  <A  34   THR    > matches  <A 894   THR    >                        ( -3.2 A from    N19 MGD A1018s )
         K  <A  60   LYS    > matches  <A1006   LYS    >                        (  2.9 A from    O17 MGD A1018s )
         E  <A 124   GLU    > matches  <A 598   GLU    >                        ( 19.4 A from    N19 MGD A1018  )
 
KERBm  3*FOUND in 3u4g  size =    3  ^    NAMN:DMB PHOSPHORIBOSYLTRANSFERASE;                     #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.9454 -0.0311 -0.3244 -0.2044  0.7189 -0.6644 -0.2539 -0.6944 -0.6733    16.366   -34.935    39.434              
         T  <A  34   THR    > matches  <A 147   THR    >                        (  5.9 A from    O1  SO4 A 336  )
         K  <A  60   LYS    > matches  <A 174   LYS    >                        (  5.0 A from    O1  SO4 A 336  )
         E  <A 124   GLU    > matches  <A 114   GLU    >                        ( 12.3 A from    O3  SO4 A 337  )
 
KERBm  3*FOUND in 5civ  size =    3  ^    SIBLING BACTERIOCIN;                                    #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.9548  0.0785 -0.2867  0.0906  0.9955 -0.0291 -0.2831  0.0537  0.9576    63.004   -31.203    -3.061              
         T  <A  34   THR    > matches  <A 169   THR    > 
         K  <A  60   LYS    > matches  <A 173   LYS    > 
         E  <A 124   GLU    > matches  <A  16   GLU    > 
 
KERBm  3*FOUND in 3rjz  size =    3  ^    N-TYPE ATP PYROPHOSPHATASE SUPERFAMILY;                 #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.4663 -0.6963 -0.5457  0.6778 -0.1151  0.7262  0.5685  0.7085 -0.4183    22.272   -71.353   -17.484              
         T  <A  34   THR    > matches  <A  36   THR    > 
         K  <A  60   LYS    > matches  <A  68   LYS    > 
         E  <A 124   GLU    > matches  <A 183   GLU    > 
 
KERBm  3*FOUND in 1vb3  size =    3  ^    THREONINE SYNTHASE;                                     #    1                            
  RMSD =     1.45 A
  TRANSFORM   -0.9999  0.0004  0.0130  0.0091  0.7338  0.6793  0.0092 -0.6793  0.7338    18.577   -67.268    47.301              
         T  <A  34   THR    > matches  <A 376   THR    >                        (  5.9 A from    O4  SO4 A 501  )
         K  <A  60   LYS    > matches  <A 107   LYS    >                        ( -2.5 A from    OA  KPA A 500s )
         E  <A 124   GLU    > matches  <A 342   GLU    >                        ( 22.3 A from    O4  SO4 A 501  )
 
KERBm  3*FOUND in 4rww  size =    3  ^    LMO2692 PROTEIN;                                        #    1                            
  RMSD =     1.45 A
  TRANSFORM    0.8324  0.3628 -0.4189 -0.4931  0.8299 -0.2610 -0.2530 -0.4238 -0.8697   -90.406   -56.996   -14.045              
         T  <A  34   THR    > matches  <A  42   THR    >                        ( 10.2 A from   O2'1 2BA A2001  )
         K  <A  60   LYS    > matches  <A  29   LYS    >                        ( 15.6 A from   O2'1 2BA A2001  )
         E  <A 124   GLU    > matches  <A  90   GLU    >                        ( 12.0 A from    O4' 2BA A2001  )
 
KERBm  3*FOUND in 1cja  size =    3  ^    PROTEIN (ACTIN-FRAGMIN KINASE);                         #    1                            
  RMSD =     1.46 A
  TRANSFORM    0.5522 -0.7702 -0.3192  0.2694  0.5271 -0.8060 -0.7890 -0.3591 -0.4985    77.868   -37.683    68.449              
         T  <A  34   THR    > matches  <A 169   THR    >                        (  4.3 A from    O3' AMP A 425  )
         K  <A  60   LYS    > matches  <A 172   LYS    >                        (  4.5 A from    O2' AMP A 425  )
         E  <A 124   GLU    > matches  <A   9   GLU    >                        ( 11.9 A from    N6  AMP A 425  )
 
KERBm  3*FOUND in 4dv8  size =    3  ^    LETHAL FACTOR;                                          #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.0497  0.9404 -0.3363  0.3852 -0.2926 -0.8752  0.9215  0.1730  0.3477     8.800    -3.840    -9.338              
         T  <A  34   THR    > matches  <A 332   THR    >                        ( 13.3 A from    C28 0LX A 802  )
         K  <A  60   LYS    > matches  <A 335   LYS    >                        (  9.3 A from    C28 0LX A 802  )
         E  <A 124   GLU    > matches  <A 439   GLU    >                        ( 16.0 A from    O9  MLI A 803  )
 
KERBm  3*FOUND in 4xci  size =    3  ^    THERMOSOME SUBUNIT BETA;                                #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.3783  0.8436  0.3811 -0.2712  0.2927 -0.9170  0.8851  0.4502 -0.1180  -236.138   269.275  -199.322              
         T  <A  34   THR    > matches  <B 106   THR    > 
         K  <A  60   LYS    > matches  <B  96   LYS    > 
         E  <A 124   GLU    > matches  <B 462   GLU    > 
 
KERBm  3*FOUND in 2a6h  size =    3  ^    DNA-DIRECTED RNA POLYMERASE ALPHA CHAIN;                #    7                            
  RMSD =     1.46 A
  TRANSFORM    0.2774 -0.5353 -0.7978 -0.0769  0.8154 -0.5738 -0.9577 -0.2205 -0.1850   165.071  -153.359    69.181              
         T  <A  34   THR    > matches  <D1382   THR    >                        ( 27.4 A from   ZN    ZN D7412  )
         K  <A  60   LYS    > matches  <D1418   LYS    >                        ( 28.3 A from   ZN    ZN D7412  )
         E  <A 124   GLU    > matches  <D 479   GLU    >                        ( 41.9 A from   ZN    ZN D7412  )
 
KERBm  3*FOUND in 4kyz  size =    3  ^    DESIGNED PROTEIN OR327;                                 #    1                            
  RMSD =     1.46 A
  TRANSFORM    0.2318  0.2347 -0.9440  0.0452  0.9668  0.2514 -0.9717  0.1009 -0.2135    25.537   -11.088    25.468              
         T  <A  34   THR    > matches  <A 157   THR    > 
         K  <A  60   LYS    > matches  <A  82   LYS    > 
         E  <A 124   GLU    > matches  <A  35   GLU    > 
 
KERBm  3*FOUND in 1wa3  size =    3  ^    2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE;             #    1                            
  RMSD =     1.46 A
  TRANSFORM    0.0835 -0.9840  0.1575  0.7630 -0.0385 -0.6453 -0.6410 -0.1741 -0.7475    22.713   -31.277    23.695              
         T  <A  34   THR    > matches  <A 156   THR    >                        (  5.3 A from    C2  PYR A1204  )
         K  <A  60   LYS    > matches  <A 129   LYS    >                        ( -1.3 A from    C2  PYR A1204s )
         E  <A 124   GLU    > matches  <A 188   GLU    >                        ( 14.5 A from    O2  SO4 A1205  )
 
KERBm  3*FOUND in 5hr5  size =    3  ^    6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATAS     #    2                            
  RMSD =     1.46 A
  TRANSFORM    0.6649  0.5687 -0.4843  0.6907 -0.7149  0.1089  0.2843  0.4069  0.8681     0.687    -3.121   -26.258              
         T  <A  34   THR    > matches  <A  53   THR    >                        ( -3.7 A from    O1B ADP A 604s )
         K  <A  60   LYS    > matches  <A  57   LYS    >                        (  7.8 A from    O2A ADP A 604  )
         E  <A 124   GLU    > matches  <A 196   GLU    >                        ( 10.7 A from   H2'2 DIO A 601  )
 
KERBm  3*FOUND in 2x46  size =    3  ^    ALLERGEN ARG R 1;                                       #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.3810 -0.5176 -0.7661  0.7079 -0.6963  0.1184  0.5947  0.4972 -0.6317    53.266     3.319     8.038              
         T  <A  34   THR    > matches  <A  68   THR    >                        ( 10.5 A from    O2  TRS A1160  )
         K  <A  60   LYS    > matches  <A  80   LYS    >                        ( 15.2 A from    O2  TRS A1160  )
         E  <A 124   GLU    > matches  <A  60   GLU    >                        ( 14.2 A from    N   TRS A1160  )
 
KERBm  3*FOUND in 1x7d  size =    3  ^    ORNITHINE CYCLODEAMINASE;                               #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.8812  0.2947 -0.3698 -0.4633 -0.6940  0.5511  0.0942 -0.6569 -0.7480    58.548    39.250    73.177              
         T  <A  34   THR    > matches  <A 181   THR    >                        ( 20.4 A from    C2A NAD A1302  )
         K  <A  60   LYS    > matches  <A 175   LYS    >                        ( 18.3 A from    O3B NAD A1302  )
         E  <A 124   GLU    > matches  <A 217   GLU    >                        ( 18.5 A from    C2A NAD A1302  )
 
KERBm  3*FOUND in 2gy5  size =    3  ^    ANGIOPOIETIN-1 RECEPTOR;                                #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.8458 -0.5320 -0.0384 -0.0449 -0.0006  0.9990  0.5315 -0.8467  0.0234   123.379   -55.353    14.224              
         T  <A  34   THR    > matches  <A 115   THR    >                        ( 13.1 A from    O1  SO4 A   1  )
         K  <A  60   LYS    > matches  <A 117   LYS    >                        ( 19.4 A from    O4  SO4 A   3  )
         E  <A 124   GLU    > matches  <A 109   GLU    >                        (  9.6 A from    O4  SO4 A   1  )
 
KERBm  3*FOUND in 5zb9  size =    3  ^    DNA DAMAGE RESPONSE PROTEIN RTT109, PUTATIVE;           #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.5497  0.5784  0.6027  0.6267 -0.1914  0.7554 -0.5523 -0.7929  0.2573   -19.631   -76.110    81.029              
         T  <A  34   THR    > matches  <A  96   THR    >                        ( 15.4 A from    O2  GOL A 601  )
         K  <A  60   LYS    > matches  <A 156   LYS    >                        ( 11.8 A from    O2  GOL A 601  )
         E  <A 124   GLU    > matches  <A 450   GLU    >                        ( 28.5 A from    O2  GOL A 601  )
 
KERBm  3*FOUND in 2gi3  size =    3  ^    GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A;          #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.6938  0.5127 -0.5057  0.0466 -0.6688 -0.7420  0.7186  0.5383 -0.4402    80.622    22.313   -46.658              
         T  <A  34   THR    > matches  <A  93   THR    >                        ( 16.9 A from    CM  MPD A 481  )
         K  <A  60   LYS    > matches  <A  97   LYS    >                        ( 11.6 A from    CM  MPD A 481  )
         E  <A 124   GLU    > matches  <A 302   GLU    >                        (  9.5 A from    OXT ACT A 476  )
 
KERBm  3*FOUND in 2xze  size =    3  ^    STAM-BINDING PROTEIN;                                   #    2                            
  RMSD =     1.46 A
  TRANSFORM   -0.3985 -0.0991  0.9118  0.9165 -0.0049  0.4000  0.0351 -0.9951 -0.0928  -188.036   -98.629    66.021              
         T  <A  34   THR    > matches  <A  68   THR    > 
         K  <A  60   LYS    > matches  <A  73   LYS    > 
         E  <A 124   GLU    > matches  <A 105   GLU    > 
 
KERBm  3*FOUND in 2xmo  size =    3  ^    LMO2642 PROTEIN;                                        #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.8588  0.4927 -0.1404 -0.4101 -0.4969  0.7648 -0.3071 -0.7144 -0.6288    37.881    -7.990    38.877              
         T  <A  34   THR    > matches  <A 119   THR    >                        (  8.9 A from   CA    CA A 600  )
         K  <A  60   LYS    > matches  <A 123   LYS    >                        ( 13.0 A from   CA    CA A 600  )
         E  <A 124   GLU    > matches  <A 107   GLU    >                        ( 11.7 A from    O2  PO4 A1444  )
 
KERBm  3*FOUND in 1n9e  size =    3  ^    LYSYL OXIDASE;                                          #    1                            
  RMSD =     1.46 A
  TRANSFORM    0.3132 -0.2004 -0.9283  0.8252 -0.4264  0.3705  0.4701  0.8821 -0.0318    84.675   -81.778    12.045              
         T  <A  34   THR    > matches  <A 474   THR    >                        (  3.9 A from    O   TPQ A 478  )
         K  <A  60   LYS    > matches  <A 479+  LYS    >                        (  3.5 A from    C   TPQ A 478  )
         E  <A 124   GLU    > matches  <A 431   GLU    >                        (  9.4 A from    O2  SO4 A 812  )
 
KERBm  3*FOUND in 4lb8  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.2401  0.1863  0.9527 -0.5648  0.7714 -0.2932  0.7895  0.6085  0.0799    22.185   -65.728   -42.996              
         T  <A  34   THR    > matches  <A 126   THR    >                        ( 22.8 A from   CL    CL A 402  )
         K  <A  60   LYS    > matches  <A 169   LYS    >                        ( 22.2 A from   CL    CL A 402  )
         E  <A 124   GLU    > matches  <A  93   GLU    >                        ( 28.9 A from   CL    CL A 401  )
 
KERBm  3*FOUND in 3nua  size =    3  ^    PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYN     #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.3002  0.9363 -0.1825  0.8638  0.1856 -0.4684  0.4047  0.2982  0.8645    47.407   -40.342    29.389              
         T  <A  34   THR    > matches  <A 198   THR    >                        ( -4.5 A from    N3  AMP A 242s )
         K  <A  60   LYS    > matches  <A 178   LYS    >                        ( -3.8 A from    N1  AMP A 242s )
         E  <A 124   GLU    > matches  <A  45   GLU    >                        ( 17.5 A from    O1A ADP A 241  )
 
KERBm  3*FOUND in 4m82  size =    3  ^    EXO-1,3-BETA-GLUCANASE;                                 #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.7977 -0.5537  0.2389 -0.5412  0.4825 -0.6887 -0.2661  0.6787  0.6845    52.618    10.343    52.277              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 17.1 A from    O3  BGC A 502  )
         K  <A  60   LYS    > matches  <A 173   LYS    >                        ( 16.7 A from    C2  EDO A 504  )
         E  <A 124   GLU    > matches  <A 243   GLU    >                        ( 11.7 A from    O3  BGC A 502  )
 
KERBm  3*FOUND in 5ly9  size =    3  ^    VARIANT SURFACE GLYCOPROTEIN MITAT 1.1;                 #    1                            
  RMSD =     1.46 A
  TRANSFORM    0.3181 -0.4655  0.8259 -0.8348 -0.5504  0.0113 -0.4493  0.6931  0.5636    -4.851    88.411   -47.152              
         T  <A  34   THR    > matches  <A 363   THR    >                        ( 28.9 A from    C8  NAG A 402  )
         K  <A  60   LYS    > matches  <A 366   LYS    >                        ( 32.4 A from    C8  NAG A 402  )
         E  <A 124   GLU    > matches  <A 322   GLU    >                        ( 10.4 A from    O6  MAN A 405  )
 
KERBm  3*FOUND in 1v08  size =    3  ^    BETA-GLUCOSIDASE;                                       #    1                            
  RMSD =     1.46 A
  TRANSFORM    0.3093 -0.5990 -0.7386  0.8947 -0.0798  0.4394  0.3222  0.7967 -0.5113    63.305   -17.121   -19.115              
         T  <A  34   THR    > matches  <A 440   THR    >                        ( 17.3 A from    N18 NTZ A1502  )
         K  <A  60   LYS    > matches  <A 387   LYS    >                        ( 21.8 A from    N18 NTZ A1502  )
         E  <A 124   GLU    > matches  <A 497   GLU    >                        ( 26.3 A from    C6  NTZ A1502  )
 
KERBm  3*FOUND in 2f3o  size =    3  ^    PYRUVATE FORMATE-LYASE 2;                               #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.8176 -0.1569 -0.5539 -0.3953  0.8525  0.3421 -0.4186 -0.4987  0.7590    95.955   -98.405   -35.787              
         T  <A  34   THR    > matches  <A  67   THR    >                        ( 21.6 A from    O3  GOL A 778  )
         K  <A  60   LYS    > matches  <A 310   LYS    >                        ( 21.4 A from    O3  GOL A 778  )
         E  <A 124   GLU    > matches  <A  29   GLU    >                        ( 26.5 A from    C5  PGE A 777  )
 
KERBm  3*FOUND in 2xz9  size =    3  ^    PHOSPHOENOLPYRUVATE-PROTEIN KINASE (PTS SYSTEM EI       #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.6600  0.2410  0.7115 -0.1948  0.8598 -0.4720  0.7255  0.4501  0.5206    37.269     3.773     6.843              
         T  <A  34   THR    > matches  <A 277   THR    >                        ( 15.6 A from    C3  PYR A6450  )
         K  <A  60   LYS    > matches  <A 279   LYS    >                        ( 22.2 A from    C3  PYR A6450  )
         E  <A 124   GLU    > matches  <A 431   GLU    >                        (  2.8 A from   MG    MG A   1s )
 
KERBm  3*FOUND in 3dqp  size =    3  ^    OXIDOREDUCTASE YLBE;                                    #    2                            
  RMSD =     1.46 A
  TRANSFORM   -0.8665  0.4889 -0.1010  0.3783  0.7751  0.5061 -0.3257 -0.4003  0.8565    47.364   -48.127    34.108              
         T  <A  34   THR    > matches  <A   9   THR    > 
         K  <A  60   LYS    > matches  <A  14   LYS    > 
         E  <A 124   GLU    > matches  <A  56   GLU    > 
 
KERBm  3*FOUND in 3zuz  size =    3  ^    PROTEIN SHQ1;                                           #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.9090  0.3145 -0.2735  0.2681 -0.0613 -0.9614  0.3191  0.9473  0.0286    27.819     3.190    23.159              
         T  <A  34   THR    > matches  <A 248   THR    >                        ( 15.2 A from    C1  IPA A1507  )
         K  <A  60   LYS    > matches  <A 253   LYS    >                        ( 15.0 A from    C1  IPA A1507  )
         E  <A 124   GLU    > matches  <A 224   GLU    >                        ( 16.3 A from    OH ACME A 470  )
 
KERBm  3*FOUND in 1e9r  size =    3  ^    CONJUGAL TRANSFER PROTEIN TRWB;                         #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.2038  0.9714  0.1216 -0.7939 -0.0913 -0.6011  0.5728  0.2190 -0.7899   -41.112   180.026   146.509              
         T  <A  34   THR    > matches  <A 261   THR    >                        ( 17.5 A from    O1  SO4 A 602  )
         K  <A  60   LYS    > matches  <A 230   LYS    >                        ( 22.9 A from    O1  SO4 A 602  )
         E  <A 124   GLU    > matches  <A 272   GLU    >                        ( 17.6 A from    O3  SO4 A 602  )
 
KERBm  3*FOUND in 3nbu  size =    3  ^    GLUCOSE-6-PHOSPHATE ISOMERASE;                          #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.8121  0.5767  0.0886 -0.5826 -0.7928 -0.1791  0.0331  0.1971 -0.9798   -30.936    51.393     0.389              
         T  <A  34   THR    > matches  <A 200   THR    > 
         K  <A  60   LYS    > matches  <A 145   LYS    > 
         E  <A 124   GLU    > matches  <A 191   GLU    > 
 
KERBm  3*FOUND in 1p3d  size =    3  ^    UDP-N-ACETYLMURAMATE--ALANINE LIGASE;                   #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.4836  0.8554 -0.1857  0.8752  0.4702 -0.1134  0.0097  0.2174  0.9760    45.485    -8.363   -20.312              
         T  <A  34   THR    > matches  <A 212   THR    >                        ( 13.1 A from   MN    MN A 604  )
         K  <A  60   LYS    > matches  <A 215   LYS    >                        ( 19.6 A from    O7' UMA A 602  )
         E  <A 124   GLU    > matches  <A 408   GLU    >                        (  7.2 A from    O19 UMA A 602  )
 
KERBm  3*FOUND in 1qde  size =    3  ^    TRANSLATION INITIATION FACTOR 4A;                       #    1                            
  RMSD =     1.46 A
  TRANSFORM    0.3754  0.8118  0.4473  0.9202 -0.3843 -0.0748 -0.1112 -0.4396  0.8913   -31.310    -7.546   -25.312              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 23.9 A from    O1  SO4 A 273  )
         K  <A  60   LYS    > matches  <A  88   LYS    >                        ( 26.6 A from    O1  SO4 A 273  )
         E  <A 124   GLU    > matches  <A  27   GLU    >                        ( 25.1 A from    O1  SO4 A 273  )
 
KERBm  3*FOUND in 2dtj  size =    3  ^    ASPARTOKINASE;                                          #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.1928 -0.1021 -0.9759 -0.1130 -0.9856  0.1255  0.9747 -0.1344 -0.1785    46.083   -16.174    32.034              
         T  <A  34   THR    > matches  <A  19   THR    >                        ( 12.4 A from    CG2 THR A 401  )
         K  <A  60   LYS    > matches  <A  17   LYS    >                        ( 18.2 A from    CG2 THR A 401  )
         E  <A 124   GLU    > matches  <A  55   GLU    >                        ( 17.5 A from    CG2 THR A 401  )
 
KERBm  3*FOUND in 2nxc  size =    3  ^    RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE;                #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.2329 -0.6295  0.7413  0.8344  0.2622  0.4848  0.4996 -0.7314 -0.4641    12.119   -14.220    32.149              
         T  <A  34   THR    > matches  <A 107   THR    > 
         K  <A  60   LYS    > matches  <A 102+  LYS    > 
         E  <A 124   GLU    > matches  <A 195   GLU    > 
 
KERBm  3*FOUND in 3aof  size =    3  ^    ENDOGLUCANASE;                                          #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.9826 -0.1693 -0.0769 -0.1742  0.9827  0.0625 -0.0650 -0.0748  0.9951    18.898    10.643    48.680              
         T  <A  34   THR    > matches  <A 142   THR    > 
         K  <A  60   LYS    > matches  <A 145   LYS    > 
         E  <A 124   GLU    > matches  <A 212   GLU    > 
 
KERBm  3*FOUND in 4mad  size =    3  ^    BETA-GALACTOSIDASE;                                     #    2                            
  RMSD =     1.46 A
  TRANSFORM    0.6280 -0.7329  0.2618  0.4111  0.0268 -0.9112 -0.6608 -0.6798 -0.3181     0.876   -34.774    -3.764              
         T  <A  34   THR    > matches  <A 522   THR    >                        ( 23.7 A from    C5  PG0 A 901  )
         K  <A  60   LYS    > matches  <A 566   LYS    >                        ( 28.0 A from    C5  PG0 A 901  )
         E  <A 124   GLU    > matches  <A 307   GLU    >                        ( 17.7 A from    O2  PG0 A 900  )
 
KERBm  3*FOUND in 3ess  size =    3  ^    CHOLIX TOXIN;                                           #    1                            
  RMSD =     1.46 A
  TRANSFORM    0.9111 -0.4119 -0.0167  0.3782  0.8513 -0.3636 -0.1640 -0.3250 -0.9314    17.799   -15.172     3.819              
         T  <A  34   THR    > matches  <A 496   THR    >                        (  9.3 A from    CAC 18N A   1  )
         K  <A  60   LYS    > matches  <A 623   LYS    >                        ( 15.4 A from    CAC 18N A   1  )
         E  <A 124   GLU    > matches  <A 606   GLU    >                        ( 11.5 A from    NAI 18N A   1  )
 
KERBm  3*FOUND in 2axu  size =    3  ^    PRGX;                                                   #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.3476  0.3852 -0.8548 -0.2917 -0.9109 -0.2919  0.8911 -0.1479 -0.4290   109.519    23.094   -30.031              
         T  <A  34   THR    > matches  <A 135   THR    > 
         K  <A  60   LYS    > matches  <A 139   LYS    > 
         E  <A 124   GLU    > matches  <A 126   GLU    > 
 
KERBm  3*FOUND in 4h8n  size =    3  ^    CONJUGATED POLYKETONE REDUCTASE C2;                     #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.6270  0.7697 -0.1203  0.0542  0.1971  0.9789 -0.7771 -0.6073  0.1654    -4.499   -56.720    61.818              
         T  <A  34   THR    > matches  <A  27   THR    >                        ( -3.2 A from    O1N NDP A3001s )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        (  8.9 A from    O3D NDP A3001  )
         E  <A 124   GLU    > matches  <A 243   GLU    >                        (  7.3 A from    N6A NDP A3001  )
 
KERBm  3*FOUND in 1ci6  size =    3  ^    TRANSCRIPTION FACTOR ATF-4;                             #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.5794  0.0388 -0.8141  0.6019 -0.6532 -0.4595  0.5496  0.7562 -0.3551    31.303     8.169    13.839              
         T  <A  34   THR    > matches  <A 290   THR    >                        ( 30.3 A from    O1  BME A 500  )
         K  <A  60   LYS    > matches  <A 286+  LYS    >                        ( 34.5 A from    O1  BME A 500  )
         E  <A 124   GLU    > matches  <A 304   GLU    >                        ( 12.5 A from    O1  BME A 500  )
 
KERBm  3*FOUND in 5c98  size =    3  ^    AGAP007691-PB;                                          #    1                            
  RMSD =     1.46 A
  TRANSFORM   -0.5164 -0.8246 -0.2312 -0.8069  0.5589 -0.1912 -0.2869 -0.0878  0.9539    75.085    26.168     6.963              
         T  <A  34   THR    > matches  <A 158   THR    > 
         K  <A  60   LYS    > matches  <A 105   LYS    > 
         E  <A 124   GLU    > matches  <A 166   GLU    > 
 
KERBm  3*FOUND in 5e58  size =    3  ^    CYTOCHROME P450 FAMILY 2 SUBFAMILY B;                   #    2                            
  RMSD =     1.47 A
  TRANSFORM   -0.8272  0.5327  0.1789  0.4956  0.8417 -0.2143  0.2647  0.0886  0.9602    86.694   -57.276    13.067              
         T  <A  34   THR    > matches  <A 483   THR    >                        (  6.9 A from    C3  GOL A 506  )
         K  <A  60   LYS    > matches  <A 473   LYS    >                        (  8.0 A from    C3  GOL A 506  )
         E  <A 124   GLU    > matches  <A 156   GLU    >                        ( 12.2 A from    O1  GOL A 506  )
 
KERBm  3*FOUND in 4yg0  size =    3  ^    OUTER CAPSID PROTEIN VP4;                               #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.9615 -0.1186  0.2480 -0.0585  0.9697  0.2371  0.2686 -0.2135  0.9393    53.108    -6.534    18.923              
         T  <A  34   THR    > matches  <A 218   THR    >                        ( 14.6 A from    C6  GAL A1001  )
         K  <A  60   LYS    > matches  <A 222   LYS    >                        ( 14.7 A from    O4  GAL A1001  )
         E  <A 124   GLU    > matches  <A 170   GLU    >                        ( 21.7 A from    C8  NAG A1002  )
 
KERBm  3*FOUND in 2x41  size =    3  ^    BETA-GLUCOSIDASE;                                       #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.1614 -0.5698 -0.8058 -0.2829  0.8089 -0.5154 -0.9455 -0.1448  0.2917     9.518   -40.513   -17.071              
         T  <A  34   THR    > matches  <A 476   THR    >                        ( 16.3 A from   BR    BR A1722  )
         K  <A  60   LYS    > matches  <A 480   LYS    >                        ( 17.7 A from   BR    BR A1722  )
         E  <A 124   GLU    > matches  <A 412   GLU    >                        ( 22.1 A from   BR    BR A1723  )
 
KERBm  3*FOUND in 1x13  size =    3  ^    NAD(P) TRANSHYDROGENASE SUBUNIT ALPHA;                  #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.6192 -0.7360 -0.2737  0.7403 -0.4309 -0.5160 -0.2618  0.5222 -0.8117     9.171    -9.897    32.989              
         T  <A  34   THR    > matches  <A1019   THR    > 
         K  <A  60   LYS    > matches  <A1021   LYS    > 
         E  <A 124   GLU    > matches  <A1079   GLU    > 
 
KERBm  3*FOUND in 5ddw  size =    3  ^    CRMG;                                                   #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.8472 -0.4898 -0.2059  0.5259  0.8280  0.1943 -0.0754  0.2729 -0.9591    24.886    -6.436    28.189              
         T  <A  34   THR    > matches  <A 218   THR    >                        (  7.6 A from    C10 5B6 A 601  )
         K  <A  60   LYS    > matches  <A 210   LYS    >                        (  4.4 A from    C19 5B6 A 601  )
         E  <A 124   GLU    > matches  <A 241   GLU    >                        ( 21.2 A from    C4  5B6 A 601  )
 
KERBm  3*FOUND in 5vha  size =    3  ^    DEAH (ASP-GLU-ALA-HIS) BOX POLYPEPTIDE 36;              #    2                            
  RMSD =     1.47 A
  TRANSFORM    0.7964 -0.2955  0.5277 -0.5010 -0.8110  0.3020 -0.3388  0.5049  0.7939   -31.995   -26.159   -32.029              
         T  <A  34   THR    > matches  <A 350   THR    > 
         K  <A  60   LYS    > matches  <A 353   LYS    > 
         E  <A 124   GLU    > matches  <A 686   GLU    > 
 
KERBm  3*FOUND in 6bnf  size =    3  ^    PHOSPHOETHANOLAMINE TRANSFERASE;                        #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.8556  0.2954  0.4251  0.1551 -0.9298  0.3338 -0.4939  0.2197  0.8413    30.240    28.799    22.140              
         T  <A  34   THR    > matches  <A 315   THR    >                        (  3.0 A from   ZN    ZN A 602s )
         K  <A  60   LYS    > matches  <A 363   LYS    >                        (  3.7 A from    OXT ACT A 609  )
         E  <A 124   GLU    > matches  <A 505   GLU    >                        (  8.4 A from    O   ACT A 607  )
 
KERBm  3*FOUND in 3m66  size =    3  ^    MTERF DOMAIN-CONTAINING PROTEIN 1, MITOCHONDRIAL;       #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.4033 -0.9129  0.0633  0.7805 -0.3792 -0.4970 -0.4777  0.1511 -0.8654    28.878   -19.288    21.526              
         T  <A  34   THR    > matches  <A 357   THR    > 
         K  <A  60   LYS    > matches  <A 361   LYS    > 
         E  <A 124   GLU    > matches  <A 311   GLU    > 
 
KERBm  3*FOUND in 4bx8  size =    3  ^    VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33A;        #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.7855 -0.4345  0.4406  0.3389 -0.2935 -0.8938 -0.5177 -0.8515  0.0833   -12.583    52.743    89.129              
         T  <A  34   THR    > matches  <A 282   THR    >                        ( 24.1 A from   CL    CL A1001  )
         K  <A  60   LYS    > matches  <A 280+  LYS    >                        ( 28.2 A from   CL    CL A1001  )
         E  <A 124   GLU    > matches  <A 359   GLU    >                        ( 18.4 A from   CL    CL A1001  )
 
KERBm  3*FOUND in 4nhb  size =    3  ^    TRAP DICARBOXYLATE TRANSPORTER-DCTP SUBUNIT;            #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.5952 -0.3646  0.7161  0.1273  0.8371  0.5320  0.7935 -0.4078  0.4518    32.020   -33.498   -18.036              
         T  <A  34   THR    > matches  <A 179   THR    >                        ( -4.1 A from    I   IOD A 404s )
         K  <A  60   LYS    > matches  <A 183   LYS    >                        (  5.0 A from    I   IOD A 404  )
         E  <A 124   GLU    > matches  <A  43   GLU    >                        (  6.9 A from    O2  G3P A 414  )
 
KERBm  3*FOUND in 4m5b  size =    3  ^    COBALAMIN BIOSYNTHESIS PROTEIN CBIM;                    #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.4942 -0.7641 -0.4147 -0.8693  0.4364  0.2319 -0.0038 -0.4751  0.8799   158.194    35.627    55.431              
         T  <A  34   THR    > matches  <A  25   THR    >                        (  4.5 A from    C6  HEZ A 309  )
         K  <A  60   LYS    > matches  <A  29   LYS    >                        (  7.5 A from    O6  HEZ A 309  )
         E  <A 124   GLU    > matches  <A 157   GLU    >                        ( -4.8 A from    O1  HEZ A 301s )
 
KERBm  3*FOUND in 5omv  size =    3  ^    DNA POLYMERASE;                                         #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.1006 -0.0003  0.9949 -0.8786  0.4693  0.0890  0.4669  0.8831 -0.0470   -25.384     6.992  -111.770              
         T  <A  34   THR    > matches  <A 604   THR    >                        (  4.8 A from    O2  GOL A 802  )
         K  <A  60   LYS    > matches  <A 602   LYS    >                        (  7.7 A from    O2  GOL A 802  )
         E  <A 124   GLU    > matches  <A 391   GLU    >                        ( 16.7 A from    O1  GOL A 802  )
 
KERBm  3*FOUND in 4unm  size =    3  ^    SECRETED PROTEIN;                                       #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.1254  0.9806 -0.1506 -0.4650  0.1922  0.8642 -0.8764  0.0384 -0.4801    52.438  -123.862   116.695              
         T  <A  34   THR    > matches  <A 541   THR    >                        ( 17.8 A from    O   ACT A 702  )
         K  <A  60   LYS    > matches  <A  55   LYS    >                        ( 18.1 A from    OXT ACT A 703  )
         E  <A 124   GLU    > matches  <A 640   GLU    >                        ( 17.2 A from    O   ACT A 701  )
 
KERBm  3*FOUND in 5b4b  size =    3  ^    UDP-2,3-DIACYLGLUCOSAMINE HYDROLASE;                    #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.3208 -0.9471 -0.0068  0.5696  0.1987 -0.7976 -0.7567 -0.2520 -0.6032    16.887   -19.122    10.714              
         T  <A  34   THR    > matches  <A 164   THR    >                        ( -3.7 A from    O4 BLP5 A 301s )
         K  <A  60   LYS    > matches  <A 167   LYS    >                        ( -2.8 A from    O4 ALP5 A 301s )
         E  <A 124   GLU    > matches  <A  14   GLU    >                        ( 13.3 A from    C20ALP5 A 301  )
 
KERBm  3*FOUND in 5fgn  size =    3  ^    LIPOOLIGOSACCHARIDE PHOSPHOETHANOLAMINE TRANSFERASE     #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.0412  0.3482 -0.9365 -0.6783 -0.6785 -0.2821  0.7336 -0.6469 -0.2082     2.825    -2.517   -19.610              
         T  <A  34   THR    > matches  <A 280   THR    >                        (  2.7 A from   ZN    ZN A 603s )
         K  <A  60   LYS    > matches  <A 328   LYS    >                        ( -2.8 A from    O6B LMT A 602s )
         E  <A 124   GLU    > matches  <A 459   GLU    >                        ( 15.0 A from    O3' LMT A 602  )
 
KERBm  3*FOUND in 1prz  size =    3  ^    RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D;       #    2                            
  RMSD =     1.47 A
  TRANSFORM    0.8422 -0.4970 -0.2091  0.0294  0.4296 -0.9026 -0.5384 -0.7540 -0.3764    24.670    -3.729    60.357              
         T  <A  34   THR    > matches  <A 143   THR    > 
         K  <A  60   LYS    > matches  <A  98   LYS    > 
         E  <A 124   GLU    > matches  <A 216   GLU    > 
 
KERBm  3*FOUND in 4g6h  size =    3  ^    ROTENONE-INSENSITIVE NADH-UBIQUINONE OXIDOREDUCTASE     #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.4533  0.0771  0.8880 -0.8903 -0.0891 -0.4466 -0.0447  0.9930 -0.1091    -4.160   -15.348   -14.827              
         T  <A  34   THR    > matches  <A 348   THR    >                        ( 11.2 A from    N6A FAD A 601  )
         K  <A  60   LYS    > matches  <A 352   LYS    >                        ( 16.9 A from    N6A FAD A 601  )
         E  <A 124   GLU    > matches  <A 197   GLU    >                        (  4.6 A from    O2B FAD A 601  )
 
KERBm  3*FOUND in 5dkx  size =    3  ^    ALPHA GLUCOSIDASE-LIKE PROTEIN;                         #    2                            
  RMSD =     1.47 A
  TRANSFORM    0.9316 -0.3635 -0.0045  0.2974  0.7693 -0.5654 -0.2090 -0.5254 -0.8248    36.749   -15.380    63.334              
         T  <A  34   THR    > matches  <A 738   THR    >                        (  6.2 A from   CL    CL A1003  )
         K  <A  60   LYS    > matches  <A 387   LYS    >                        (  3.8 A from   CL    CL A1003  )
         E  <A 124   GLU    > matches  <A 405   GLU    >                        ( 23.2 A from   CL    CL A1003  )
 
KERBm  3*FOUND in 3wpu  size =    3  ^    BETA-FRUCTOFURANOSIDASE;                                #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.1355  0.5660  0.8132  0.4011 -0.7818  0.4774 -0.9059 -0.2615  0.3330    32.396    -0.337    11.396              
         T  <A  34   THR    > matches  <A  61   THR    >                        ( 21.8 A from    O3  GOL A1001  )
         K  <A  60   LYS    > matches  <A  63   LYS    >                        ( 26.8 A from    O3  GOL A1001  )
         E  <A 124   GLU    > matches  <A 294   GLU    >                        ( 27.0 A from    O3  GOL A1001  )
 
KERBm  3*FOUND in 3pgb  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    2                            
  RMSD =     1.47 A
  TRANSFORM   -0.0661 -0.1136 -0.9913 -0.5953 -0.7928  0.1306  0.8008 -0.5987  0.0152   -11.308   -53.326    35.503              
         T  <A  34   THR    > matches  <A  96   THR    >                        ( 13.9 A from    O6  NAG A4491  )
         K  <A  60   LYS    > matches  <A 801   LYS    >                        (  9.0 A from    O6  NAG A4491  )
         E  <A 124   GLU    > matches  <A 136   GLU    >                        ( 17.8 A from   CA    CA A 903  )
 
KERBm  3*FOUND in 4pkf  size =    3  ^    TUTD;                                                   #    2                            
  RMSD =     1.47 A
  TRANSFORM   -0.2603 -0.5035 -0.8238 -0.7821 -0.3904  0.4857  0.5662 -0.7708  0.2922    45.242   -51.207   -18.826              
         T  <A  34   THR    > matches  <A 399   THR    >                        ( 19.6 A from    O3  GOL A 903  )
         K  <A  60   LYS    > matches  <A 435   LYS    >                        ( 20.8 A from    O3  GOL A 903  )
         E  <A 124   GLU    > matches  <A 209   GLU    >                        ( 23.1 A from    O3  GOL A 904  )
 
KERBm  3*FOUND in 5ylu  size =    3  ^    POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1;            #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.6843  0.7069 -0.1790 -0.6128 -0.4243  0.6667 -0.3953 -0.5659 -0.7235    67.584     9.735    43.544              
         T  <A  34   THR    > matches  <A 788   THR    >                        ( 10.1 A from    NAK HKT A1101  )
         K  <A  60   LYS    > matches  <A 791   LYS    >                        (  7.8 A from    NAK HKT A1101  )
         E  <A 124   GLU    > matches  <A 371   GLU    >                        ( 19.8 A from    C28 PCW A1103  )
 
KERBm  3*FOUND in 1fnn  size =    3  ^    CELL DIVISION CONTROL PROTEIN 6;                        #    3                            
  RMSD =     1.47 A
  TRANSFORM   -0.0436 -0.8992  0.4353  0.6332  0.3122  0.7083  0.7728 -0.3065 -0.5557    -4.983   -15.213    14.099              
         T  <A  34   THR    > matches  <A 380   THR    >                        ( 38.3 A from    O4' ADP A 398  )
         K  <A  60   LYS    > matches  <A 384   LYS    >                        ( 42.7 A from    O4' ADP A 398  )
         E  <A 124   GLU    > matches  <A 348   GLU    >                        ( 20.3 A from    O4' ADP A 398  )
 
KERBm  3*FOUND in 3p8c  size =    3  ^    CYTOPLASMIC FMR1-INTERACTING PROTEIN 1;                 #    7                            
  RMSD =     1.47 A
  TRANSFORM    0.3583  0.4829  0.7990  0.6630 -0.7342  0.1464 -0.6573 -0.4773  0.5832  -151.429   -27.386   -83.204              
         T  <A  34   THR    > matches  <D 253   THR    >                        ( 18.0 A from    O1  GOL A1261  )
         K  <A  60   LYS    > matches  <D 248+  LYS    >                        ( 20.7 A from    O1  GOL A1260  )
         E  <A 124   GLU    > matches  <A 827   GLU    >                        ( 10.5 A from    O2  GOL A1261  )
 
KERBm  3*FOUND in 1xv5  size =    3  ^    DNA ALPHA-GLUCOSYLTRANSFERASE;                          #    1                            
  RMSD =     1.47 A
  TRANSFORM    0.6897  0.6775  0.2556  0.3367  0.0125 -0.9415  0.6411 -0.7355  0.2194    -6.367     1.106    41.679              
         T  <A  34   THR    > matches  <A1017   THR    >                        ( -4.3 A from    O   CME A1014s )
         K  <A  60   LYS    > matches  <A1015+  LYS    >                        ( -2.9 A from    O   CME A1014s )
         E  <A 124   GLU    > matches  <A1064   GLU    >                        ( 20.9 A from   CL    CL A1401  )
 
KERBm  3*FOUND in 4kvm  size =    3  ^    N-TERMINAL ACETYLTRANSFERASE A COMPLEX SUBUNIT NAT1     #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.1776 -0.4056  0.8966  0.0535  0.9058  0.4204  0.9826 -0.1227  0.1391    66.161    30.926    55.983              
         T  <A  34   THR    > matches  <A 518   THR    >                        ( 13.8 A from   CL    CL A 801  )
         K  <A  60   LYS    > matches  <A 514   LYS    >                        ( 19.0 A from   CL    CL A 801  )
         E  <A 124   GLU    > matches  <A 553   GLU    >                        ( 18.3 A from   CL    CL A 802  )
 
KERBm  3*FOUND in 3etv  size =    3  ^    PROTEIN TRANSPORT PROTEIN TIP20, PROTEIN TRANSPORT      #    1                            
  RMSD =     1.47 A
  TRANSFORM   -0.8467  0.4721 -0.2454 -0.5101 -0.8515  0.1216  0.1516 -0.2281 -0.9618    31.867    42.682    28.200              
         T  <A  34   THR    > matches  <A  82   THR    > 
         K  <A  60   LYS    > matches  <A  78   LYS    > 
         E  <A 124   GLU    > matches  <A 158   GLU    > 
 
KERBm  3*FOUND in 2rdy  size =    3  ^    BH0842 PROTEIN;                                         #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.8132  0.4422 -0.3784  0.3666 -0.1159 -0.9231  0.4520  0.8894  0.0678   -33.111    23.958  -100.372              
         T  <A  34   THR    > matches  <A 745   THR    > 
         K  <A  60   LYS    > matches  <A 783   LYS    > 
         E  <A 124   GLU    > matches  <A 692   GLU    > 
 
KERBm  3*FOUND in 2e2r  size =    3  ^    ESTROGEN-RELATED RECEPTOR GAMMA;                        #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.0114  0.9352  0.3539 -0.1684 -0.3506  0.9212 -0.9857  0.0491 -0.1615    34.365    16.342     7.477              
         T  <A  34   THR    > matches  <A 427   THR    >                        (  7.6 A from    O1  2OH A1401  )
         K  <A  60   LYS    > matches  <A 430   LYS    >                        (  9.8 A from    O1  2OH A1401  )
         E  <A 124   GLU    > matches  <A 245   GLU    >                        ( 11.3 A from    O2  2OH A1401  )
 
KERBm  3*FOUND in 4phz  size =    3  ^    UNKNOWN PEPTIDE;                                        #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.0525  0.1410 -0.9886  0.5803 -0.8014 -0.1451  0.8127  0.5813  0.0398   -44.745   -11.825   -12.404              
         T  <A  34   THR    > matches  <A 285   THR    >                        ( 34.4 A from   CU    CU A 501  )
         K  <A  60   LYS    > matches  <A 307   LYS    >                        ( 40.6 A from   CU    CU A 501  )
         E  <A 124   GLU    > matches  <A 113   GLU    >                        ( 30.8 A from   CU    CU A 501  )
 
KERBm  3*FOUND in 4muo  size =    3  ^    UNCHARACTERIZED PROTEIN YBIB;                           #    2                            
  RMSD =     1.48 A
  TRANSFORM    0.0537 -0.2175  0.9746  0.8754 -0.4594 -0.1507 -0.4805 -0.8612 -0.1658   -91.443   -12.355    18.457              
         T  <A  34   THR    > matches  <A  70   THR    > 
         K  <A  60   LYS    > matches  <A  72   LYS    > 
         E  <A 124   GLU    > matches  <A 119   GLU    > 
 
KERBm  3*FOUND in 1qsd  size =    3  ^    PROTEIN (BETA-TUBULIN BINDING POST-CHAPERONIN COFAC     #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.5722  0.6933 -0.4380  0.5914 -0.7189 -0.3654  0.5682  0.0499  0.8214   -25.979   -11.518    16.045              
         T  <A  34   THR    > matches  <A  64   THR    > 
         K  <A  60   LYS    > matches  <A  68   LYS    > 
         E  <A 124   GLU    > matches  <A  53   GLU    > 
 
KERBm  3*FOUND in 2qj8  size =    3  ^    MLR6093 PROTEIN;                                        #    3                            
  RMSD =     1.48 A
  TRANSFORM    0.6162 -0.6302 -0.4723 -0.1716 -0.6928  0.7004  0.7686  0.3506  0.5351    25.215    40.415   -64.980              
         T  <A  34   THR    > matches  <A 178   THR    > 
         K  <A  60   LYS    > matches  <A 171   LYS    > 
         E  <A 124   GLU    > matches  <A 321   GLU    > 
 
KERBm  3*FOUND in 2p1z  size =    3  ^    PHOSPHORIBOSYLTRANSFERASE;                              #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.0665  0.4038 -0.9124  0.7026 -0.6303 -0.3302  0.7085  0.6630  0.2418    37.352    19.663   -33.318              
         T  <A  34   THR    > matches  <A 122   THR    > 
         K  <A  60   LYS    > matches  <A 151+  LYS    > 
         E  <A 124   GLU    > matches  <A  94   GLU    > 
 
KERBm  3*FOUND in 2wyh  size =    3  ^    ALPHA-MANNOSIDASE;                                      #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.0562  0.7631  0.6438  0.9032  0.2360 -0.3586  0.4256 -0.6016  0.6759   -39.297   -26.884   -54.979              
         T  <A  34   THR    > matches  <A 344   THR    >                        ( 10.9 A from    O3  GOL A 904  )
         K  <A  60   LYS    > matches  <A 372   LYS    >                        ( 11.9 A from    O2  GOL A 909  )
         E  <A 124   GLU    > matches  <A 877   GLU    >                        (  6.0 A from    O2  GOL A 904  )
 
KERBm  3*FOUND in 4jzx  size =    3  ^    FARNESYL PYROPHOSPHATE SYNTHASE;                        #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.6925  0.2568  0.6742  0.3830 -0.9228 -0.0419 -0.6114 -0.2872  0.7374   -42.201     3.390    27.796              
         T  <A  34   THR    > matches  <A  42   THR    >                        (  0.8 A from    CB  THR A  42  )
         K  <A  60   LYS    > matches  <A 110   LYS    >                        (  0.0 A from    NZ  LYS A 110  )
         E  <A 124   GLU    > matches  <A  23   GLU    >                        (  0.5 A from    CD  GLU A  23  )
 
KERBm  3*FOUND in 4a5u  size =    3  ^    RNA REPLICASE POLYPROTEIN;                              #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.3691  0.8516 -0.3721  0.2251 -0.4704 -0.8533  0.9017 -0.2312  0.3653   -30.436    48.286    22.818              
         T  <A  34   THR    > matches  <A 839   THR    > 
         K  <A  60   LYS    > matches  <A 874   LYS    > 
         E  <A 124   GLU    > matches  <A 750   GLU    > 
 
KERBm  3*FOUND in 4umw  size =    3  ^    ZINC-TRANSPORTING ATPASE;                               #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.9182 -0.0773 -0.3885  0.3158 -0.4489  0.8359  0.2390  0.8902  0.3878   -28.063   -44.846   -94.887              
         T  <A  34   THR    > matches  <A 583   THR    >                        ( -3.7 A from    F4  ALF A1731s )
         K  <A  60   LYS    > matches  <A 610   LYS    >                        ( -3.1 A from    F2  ALF A1731s )
         E  <A 124   GLU    > matches  <A 536   GLU    >                        ( 19.7 A from    F4  ALF A1731  )
 
KERBm  3*FOUND in 2z2u  size =    3  ^    UPF0026 PROTEIN MJ0257;                                 #    2                            
  RMSD =     1.48 A
  TRANSFORM   -0.8912  0.0726  0.4478 -0.3161 -0.8074 -0.4982 -0.3254  0.5855 -0.7425    27.247    25.563     8.015              
         T  <A  34   THR    > matches  <A 177   THR    > 
         K  <A  60   LYS    > matches  <A 216   LYS    > 
         E  <A 124   GLU    > matches  <A 124   GLU    > 
 
KERBm  3*FOUND in 4dim  size =    3  ^    PHOSPHORIBOSYLGLYCINAMIDE SYNTHETASE;                   #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.2385 -0.7206 -0.6510  0.2686  0.5953 -0.7573 -0.9333  0.3555 -0.0515    56.723    37.170    45.315              
         T  <A  34   THR    > matches  <A 380   THR    > 
         K  <A  60   LYS    > matches  <A 383   LYS    > 
         E  <A 124   GLU    > matches  <A 237   GLU    > 
 
KERBm  3*FOUND in 1xip  size =    3  ^    NUCLEOPORIN NUP159;                                     #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.8768 -0.3065 -0.3704  0.3265 -0.9452  0.0092  0.3529  0.1129 -0.9288    93.584    41.953    65.800              
         T  <A  34   THR    > matches  <A 219   THR    > 
         K  <A  60   LYS    > matches  <A 280   LYS    > 
         E  <A 124   GLU    > matches  <A 206   GLU    > 
 
KERBm  3*FOUND in 5mqr  size =    3  ^    BETA-L-ARABINOBIOSIDASE;                                #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.3683  0.6810 -0.6329  0.0314 -0.6895 -0.7236  0.9292 -0.2466  0.2753   -29.568    58.687    11.490              
         T  <A  34   THR    > matches  <A 694   THR    >                        ( 14.8 A from    C2  EPE A1205  )
         K  <A  60   LYS    > matches  <A 685   LYS    >                        ( 17.9 A from    O1S EPE A1205  )
         E  <A 124   GLU    > matches  <A 807   GLU    >                        ( -3.6 A from    N4  EPE A1205s )
 
KERBm  3*FOUND in 1l8a  size =    3  ^    PYRUVATE DEHYDROGENASE E1 COMPONENT;                    #    2                            
  RMSD =     1.48 A
  TRANSFORM   -0.6992 -0.4082 -0.5869 -0.4674  0.8822 -0.0566 -0.5409 -0.2348  0.8077     3.190    61.365    -0.582              
         T  <A  34   THR    > matches  <A 324   THR    >                        ( 44.0 A from    C2A TDP A 887  )
         K  <A  60   LYS    > matches  <A 328   LYS    >                        ( 48.3 A from    C2A TDP A 887  )
         E  <A 124   GLU    > matches  <A 277   GLU    >                        ( 25.0 A from    C2A TDP A 887  )
 
KERBm  3*FOUND in 3u55  size =    3  ^    PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYN     #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.7418  0.5398 -0.3980  0.6318 -0.3635  0.6846 -0.2248  0.7593  0.6107    23.109   -18.547    26.621              
         T  <A  34   THR    > matches  <A  32   THR    >                        ( -6.3 A from    O2  SO4 A 501s )
         K  <A  60   LYS    > matches  <A  39   LYS    >                        ( 11.4 A from    O2  SO4 A 501  )
         E  <A 124   GLU    > matches  <A 118   GLU    >                        (  6.1 A from    O3  SO4 A 500  )
 
KERBm  3*FOUND in 3ir9  size =    3  ^    PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1;                 #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.4384  0.5781 -0.6882  0.0908  0.7333  0.6738 -0.8942  0.3579 -0.2690     2.734   -49.862    15.584              
         T  <A  34   THR    > matches  <A 254   THR    >                        ( 60.4 A from   ZN    ZN A 501  )
         K  <A  60   LYS    > matches  <A 252+  LYS    >                        ( 64.3 A from   ZN    ZN A 501  )
         E  <A 124   GLU    > matches  <A 268   GLU    >                        ( 54.7 A from   ZN    ZN A 501  )
 
KERBm  3*FOUND in 2aq5  size =    3  ^    CORONIN-1A;                                             #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.5345  0.4426  0.7200 -0.2551  0.7276 -0.6368  0.8057  0.5241  0.2760     1.721   -26.941   -46.504              
         T  <A  34   THR    > matches  <A 209   THR    >                        ( 23.4 A from    N   CSO A 152  )
         K  <A  60   LYS    > matches  <A 207   LYS    >                        ( 25.9 A from    OD  CSO A  90  )
         E  <A 124   GLU    > matches  <A 256   GLU    >                        ( 30.5 A from    OD  CSO A 152  )
 
KERBm  3*FOUND in 2p22  size =    3  ^    SUPPRESSOR PROTEIN STP22 OF TEMPERATURE-SENSITIVE A     #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.3236  0.3136  0.8927 -0.2292  0.8894 -0.3955  0.9180  0.3326  0.2159    63.172    29.539    53.280              
         T  <A  34   THR    > matches  <B 113   THR    >                        ( 23.8 A from    O3  SO4 C 215  )
         K  <A  60   LYS    > matches  <B 109+  LYS    >                        ( 28.4 A from    O3  SO4 C 215  )
         E  <A 124   GLU    > matches  <D   6   GLU    >                        ( -4.2 A from    O3  SO4 C 215s )
 
KERBm  3*FOUND in 5ghr  size =    3  ^    SSDNA-SPECIFIC EXONUCLEASE;                             #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.1443 -0.1604 -0.9764  0.5762 -0.7886  0.2147  0.8045  0.5936  0.0214   134.912     5.400   -58.016              
         T  <A  34   THR    > matches  <A 411   THR    >                        ( 12.5 A from    O4  SO4 A 503  )
         K  <A  60   LYS    > matches  <A 391+  LYS    >                        ( 13.2 A from    O4  SO4 A 503  )
         E  <A 124   GLU    > matches  <A 218   GLU    >                        ( 20.2 A from    O4  SO4 A 503  )
 
KERBm  3*FOUND in 4ecf  size =    3  ^    ABC-TYPE PHOSPHATE TRANSPORT SYSTEM, PERIPLASMIC CO     #    1                            
  RMSD =     1.48 A
  TRANSFORM    0.7219  0.5435 -0.4282 -0.6441  0.7540 -0.1288 -0.2529 -0.3688 -0.8944    -2.460     5.163    49.776              
         T  <A  34   THR    > matches  <A 210   THR    >                        (  9.0 A from    O2  EDO A 309  )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        (  7.3 A from    O2  EDO A 309  )
         E  <A 124   GLU    > matches  <A  48   GLU    >                        ( -3.4 A from    O2  EDO A 307s )
 
KERBm  3*FOUND in 2fpn  size =    3  ^    YWMB;                                                   #    2                            
  RMSD =     1.48 A
  TRANSFORM    0.4837  0.2657 -0.8339 -0.7820 -0.2967 -0.5481  0.3931 -0.9173 -0.0643    -9.941    57.801    11.474              
         T  <A  34   THR    > matches  <A  83   THR    > 
         K  <A  60   LYS    > matches  <A  86   LYS    > 
         E  <A 124   GLU    > matches  <A  96   GLU    > 
 
KERBm  3*FOUND in 2j7n  size =    3  ^    RNA-DEPENDENT RNA POLYMERASE;                           #    2                            
  RMSD =     1.48 A
  TRANSFORM   -0.0238 -0.8783 -0.4775 -0.9949 -0.0263  0.0978  0.0984 -0.4774  0.8732   113.441    42.734    25.661              
         T  <A  34   THR    > matches  <A 621   THR    >                        ( 41.8 A from   MG    MG A3374  )
         K  <A  60   LYS    > matches  <A 641+  LYS    >                        ( 39.9 A from   MG    MG A3374  )
         E  <A 124   GLU    > matches  <A 432   GLU    >                        ( 47.7 A from   MG    MG A3374  )
 
KERBm  3*FOUND in 1p1j  size =    3  ^    INOSITOL-3-PHOSPHATE SYNTHASE;                          #    2                            
  RMSD =     1.48 A
  TRANSFORM    0.8454  0.4554  0.2791 -0.0318  0.5646 -0.8248  0.5332 -0.6884 -0.4918     8.587   -32.950    65.528              
         T  <A  34   THR    > matches  <A 247   THR    >                        ( -3.9 A from    O3D NAI A 650s )
         K  <A  60   LYS    > matches  <A 369   LYS    >                        (  2.8 A from    O2D NAI A 650s )
         E  <A 124   GLU    > matches  <A 197   GLU    >                        ( 12.1 A from    O2B NAI A 650  )
 
KERBm  3*FOUND in 3q69  size =    3  ^    PROBABLE ZN BINDING PROTEIN;                            #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.1732 -0.2595 -0.9501  0.1507 -0.9603  0.2348  0.9733  0.1025 -0.2055    63.478    -8.195    12.250              
         T  <A  34   THR    > matches  <A  36   THR    > 
         K  <A  60   LYS    > matches  <A   6   LYS    > 
         E  <A 124   GLU    > matches  <A  61   GLU    > 
 
KERBm  3*FOUND in 3q69  size =    3  ^    PROBABLE ZN BINDING PROTEIN;                            #    2                            
  RMSD =     1.48 A
  TRANSFORM   -0.3463 -0.2013 -0.9163  0.0621 -0.9795  0.1917  0.9360 -0.0095 -0.3517    64.350    -3.989    21.337              
         T  <A  34   THR    > matches  <A   8   THR    > 
         K  <A  60   LYS    > matches  <A   6   LYS    > 
         E  <A 124   GLU    > matches  <A  61   GLU    > 
 
KERBm  3*FOUND in 3ehg  size =    3  ^    SENSOR KINASE (YOCF PROTEIN);                           #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.7069  0.3920  0.5888 -0.6108 -0.7580 -0.2286 -0.3567  0.5212 -0.7753    10.995    39.051    17.284              
         T  <A  34   THR    > matches  <A 292   THR    >                        (  4.6 A from    I   IOD A   7  )
         K  <A  60   LYS    > matches  <A 296   LYS    >                        ( -2.8 A from    O2G ATP A   1s )
         E  <A 124   GLU    > matches  <A 280   GLU    >                        (  6.8 A from    I   IOD A   5  )
 
KERBm  3*FOUND in 3o6z  size =    3  ^    GDP-MANNOSE PYROPHOSPHATASE NUDK;                       #    1                            
  RMSD =     1.48 A
  TRANSFORM   -0.9217  0.3877  0.0115 -0.2866 -0.6608 -0.6937  0.2613  0.6427 -0.7202    26.421    52.676    12.478              
         T  <A  34   THR    > matches  <A 105   THR    >                        (  9.7 A from   MG    MG A 202  )
         K  <A  60   LYS    > matches  <A 107+  LYS    >                        ( 13.9 A from   MG    MG A 202  )
         E  <A 124   GLU    > matches  <A 171   GLU    >                        ( 21.6 A from   MG    MG A 202  )
 
KERBm  3*FOUND in 2xs1  size =    3  ^    PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN;            #    6                            
  RMSD =     1.48 A
  TRANSFORM   -0.9845 -0.1424  0.1021 -0.0896  0.9099  0.4050  0.1506 -0.3896  0.9086   -34.786    31.745    80.971              
         T  <A  34   THR    > matches  <A 497   THR    > 
         K  <A  60   LYS    > matches  <A 501   LYS    > 
         E  <A 124   GLU    > matches  <A 462   GLU    > 
 
KERBm  3*FOUND in 1fzc  size =    3  ^    FIBRIN;                                                 #    2                            
  RMSD =     1.48 A
  TRANSFORM    0.6882 -0.0544  0.7235  0.3574 -0.8424 -0.4033 -0.6314 -0.5361  0.5603   -13.701    31.539   -25.675              
         T  <A  34   THR    > matches  <B 280   THR    >                        ( 37.3 A from   CA    CA C   1  )
         K  <A  60   LYS    > matches  <B 283   LYS    >                        ( 34.4 A from   CA    CA C   1  )
         E  <A 124   GLU    > matches  <B 315   GLU    >                        ( 32.5 A from    O6  NAG B 470  )
 
KERBm  3*FOUND in 4f66  size =    3  ^    PUTATIVE PHOSPHO-BETA-GLUCOSIDASE;                      #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.1177 -0.2622 -0.9578  0.7661 -0.6377  0.0804  0.6318  0.7243 -0.2760    41.501     3.509    24.161              
         T  <A  34   THR    > matches  <A  37   THR    >                        ( 10.0 A from    O1  EDO A 502  )
         K  <A  60   LYS    > matches  <A  55   LYS    >                        ( 15.8 A from    O1  EDO A 502  )
         E  <A 124   GLU    > matches  <A 176   GLU    >                        ( -2.7 A from    O1  BG6 A 501s )
 
KERBm  3*FOUND in 3eau  size =    3  ^    VOLTAGE-GATED POTASSIUM CHANNEL SUBUNIT BETA-2;         #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.8896  0.4189 -0.1820  0.1256  0.1588  0.9793 -0.4391  0.8940 -0.0887   -22.274   -51.130   -10.012              
         T  <A  34   THR    > matches  <A  86   THR    >                        (  0.8 A from    CB  THR A  86  )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        (  0.0 A from    NZ  LYS A 118s )
         E  <A 124   GLU    > matches  <A  67   GLU    >                        (  0.6 A from    CD  GLU A  67  )
 
KERBm  3*FOUND in 3n2t  size =    3  ^    PUTATIVE OXIDOREDUCTASE;                                #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.2479 -0.3919  0.8860 -0.0925  0.9199  0.3811  0.9644 -0.0125  0.2643    -6.586   -18.104     3.119              
         T  <A  34   THR    > matches  <A 217   THR    > 
         K  <A  60   LYS    > matches  <A 219   LYS    > 
         E  <A 124   GLU    > matches  <A 191   GLU    > 
 
KERBm  3*FOUND in 2iih  size =    3  ^    MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C;             #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.6961 -0.6732 -0.2496  0.3491 -0.0135 -0.9370 -0.6274  0.7393 -0.2444    43.339    -5.060    30.318              
         T  <A  34   THR    > matches  <A 100   THR    >                        ( 15.9 A from    O1  PO4 A 401  )
         K  <A  60   LYS    > matches  <A 102   LYS    >                        ( 17.5 A from    O1  PO4 A 401  )
         E  <A 124   GLU    > matches  <A  92   GLU    >                        ( 29.6 A from    O1  PO4 A 401  )
 
KERBm  3*FOUND in 5l8s  size =    3  ^    AMINO ACYL PEPTIDASE;                                   #    3                            
  RMSD =     1.49 A
  TRANSFORM   -0.2863  0.9558 -0.0672  0.8669  0.2285 -0.4431  0.4081  0.1851  0.8940    79.809    17.265    26.331              
         T  <A  34   THR    > matches  <A 269   THR    >                        ( 25.8 A from    O1  SO4 A 701  )
         K  <A  60   LYS    > matches  <A 387   LYS    >                        ( 20.9 A from    O1  SO4 A 701  )
         E  <A 124   GLU    > matches  <A 283   GLU    >                        ( 46.2 A from    O1  SO4 A 701  )
 
KERBm  3*FOUND in 5z5c  size =    3  ^    CYSTEINE SYNTHASE;                                      #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.2824 -0.3100  0.9079  0.8548 -0.5109  0.0914 -0.4355 -0.8018 -0.4092    37.013   -14.221    39.620              
         T  <A  34   THR    > matches  <A  77   THR    >                        ( -3.8 A from   CL    CL A 402s )
         K  <A  60   LYS    > matches  <A  46   LYS    >                        (  1.3 A from    C4A PLP A 401s )
         E  <A 124   GLU    > matches  <A 134   GLU    >                        (  5.0 A from    CA  MLY A 131  )
 
KERBm  3*FOUND in 3jy6  size =    3  ^    TRANSCRIPTIONAL REGULATOR, LACI FAMILY;                 #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.4598  0.5969 -0.6575  0.2270 -0.7948 -0.5628  0.8585 -0.1095  0.5010     8.190    45.529    -5.283              
         T  <A  34   THR    > matches  <A  83   THR    > 
         K  <A  60   LYS    > matches  <A  87   LYS    > 
         E  <A 124   GLU    > matches  <A 255   GLU    > 
 
KERBm  3*FOUND in 2hig  size =    3  ^    6-PHOSPHO-1-FRUCTOKINASE;                               #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.5232 -0.6364  0.5668  0.5234  0.7648  0.3756  0.6725 -0.1002 -0.7333    40.655   -65.718    -8.622              
         T  <A  34   THR    > matches  <A  99   THR    >                        ( 60.0 A from   NA    NA A 488  )
         K  <A  60   LYS    > matches  <A 130   LYS    >                        ( 63.5 A from   NA    NA A 488  )
         E  <A 124   GLU    > matches  <A 180   GLU    >                        ( 56.8 A from   NA    NA A 488  )
 
KERBm  3*FOUND in 4k51  size =    3  ^    EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT      #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.2453  0.1234 -0.9616  0.4853 -0.8430 -0.2320  0.8392  0.5236 -0.1469    41.590   -28.984   -48.483              
         T  <A  34   THR    > matches  <A 300   THR    > 
         K  <A  60   LYS    > matches  <A 304   LYS    > 
         E  <A 124   GLU    > matches  <A 475   GLU    > 
 
KERBm  3*FOUND in 2pms  size =    3  ^    LACTOTRANSFERRIN;                                       #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.1108 -0.4477 -0.8873 -0.7688  0.5272 -0.3620 -0.6298 -0.7223  0.2858    74.637   -12.706    80.665              
         T  <A  34   THR    > matches  <C 267   THR    >                        ( 42.0 A from   ZN    ZN C 502  )
         K  <A  60   LYS    > matches  <C 271   LYS    >                        ( 38.3 A from   ZN    ZN C 502  )
         E  <A 124   GLU    > matches  <C 251   GLU    >                        ( 51.3 A from   ZN    ZN C 502  )
 
KERBm  3*FOUND in 5aga  size =    3  ^    DNA POLYMERASE THETA;                                   #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.5569 -0.8277  0.0688  0.8119 -0.5251  0.2551  0.1751 -0.1979 -0.9645    71.279   -25.282    42.662              
         T  <A  34   THR    > matches  <A 443   THR    >                        ( 18.1 A from    O3G ANP A1892  )
         K  <A  60   LYS    > matches  <A 347   LYS    >                        ( 23.8 A from    O3G ANP A1892  )
         E  <A 124   GLU    > matches  <A 294   GLU    >                        ( 14.5 A from    O1G ANP A1892  )
 
KERBm  3*FOUND in 1yqg  size =    3  ^    PYRROLINE-5-CARBOXYLATE REDUCTASE;                      #    3                            
  RMSD =     1.49 A
  TRANSFORM   -0.1311 -0.8850  0.4468 -0.6727 -0.2516 -0.6958 -0.7282  0.3918  0.5624    51.280    32.882    17.857              
         T  <A  34   THR    > matches  <A 148   THR    >                        ( 26.8 A from    O1  SO4 A 301  )
         K  <A  60   LYS    > matches  <A 143   LYS    >                        ( 29.8 A from    O1  SO4 A 301  )
         E  <A 124   GLU    > matches  <A 155   GLU    >                        ( 28.8 A from    O1  SO4 A 301  )
 
KERBm  3*FOUND in 4c92  size =    3  ^    SM-LIKE PROTEIN LSM1;                                   #    2                            
  RMSD =     1.49 A
  TRANSFORM    0.6591  0.4017 -0.6357  0.6402 -0.7432  0.1942  0.3945  0.5350  0.7471   118.663   -84.673    34.209              
         T  <A  34   THR    > matches  <D  30   THR    > 
         K  <A  60   LYS    > matches  <D  11   LYS    > 
         E  <A 124   GLU    > matches  <G 106   GLU    > 
 
KERBm  3*FOUND in 5y58  size =    3  ^    ATP-DEPENDENT DNA HELICASE II SUBUNIT 1;                #    2                            
  RMSD =     1.49 A
  TRANSFORM   -0.3378 -0.0775 -0.9380  0.7714 -0.5938 -0.2287  0.5393  0.8009 -0.2604   177.979    89.819   -25.560              
         T  <A  34   THR    > matches  <A  41   THR    > 
         K  <A  60   LYS    > matches  <A  44   LYS    > 
         E  <A 124   GLU    > matches  <A 218   GLU    > 
 
KERBm  3*FOUND in 1ua7  size =    3  ^    ALPHA-AMYLASE;                                          #    2                            
  RMSD =     1.49 A
  TRANSFORM    0.6255  0.5275 -0.5749 -0.2128  0.8242  0.5248 -0.7506  0.2060 -0.6278    41.062   -45.067    30.538              
         T  <A  34   THR    > matches  <A  35   THR    >                        ( 12.0 A from   CA    CA A 602  )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        (  7.1 A from   CA    CA A 602  )
         E  <A 124   GLU    > matches  <A 350   GLU    >                        ( 25.4 A from    O2  BGC A 506  )
 
KERBm  3*FOUND in 5tl4  size =    3  ^    VANILLATE/3-O-METHYLGALLATE O-DEMETHYLASE;              #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.5269 -0.4920  0.6930  0.3474  0.8689  0.3527  0.7757 -0.0549 -0.6287   -17.445   -52.900    57.652              
         T  <A  34   THR    > matches  <A 434   THR    >                        ( 16.0 A from   CL    CL A 501  )
         K  <A  60   LYS    > matches  <A 432   LYS    >                        ( 11.8 A from    H32 GOL A 504  )
         E  <A 124   GLU    > matches  <A  37   GLU    >                        ( 19.3 A from   CL    CL A 501  )
 
KERBm  3*FOUND in 4yxt  size =    3  ^    POLYKETIDE BIOSYNTHESIS 3-HYDROXY-3-METHYLGLUTARYL-     #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.4492 -0.8818 -0.1435  0.0585  0.1893 -0.9802 -0.8915 -0.4319 -0.1366   101.121   -25.868    77.681              
         T  <A  34   THR    > matches  <A  93   THR    > 
         K  <A  60   LYS    > matches  <A  89   LYS    > 
         E  <A 124   GLU    > matches  <A  68   GLU    > 
 
KERBm  3*FOUND in 2ooe  size =    3  ^    CLEAVAGE STIMULATION FACTOR 77 KDA SUBUNIT;             #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.0225 -0.7184 -0.6953  0.9859 -0.0993  0.1345  0.1657  0.6886 -0.7060    98.924   -33.687   -14.338              
         T  <A  34   THR    > matches  <A 334   THR    > 
         K  <A  60   LYS    > matches  <A 337   LYS    > 
         E  <A 124   GLU    > matches  <A 136   GLU    > 
 
KERBm  3*FOUND in 5ul3  size =    3  ^    OXSB PROTEIN;                                           #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.5021 -0.7605 -0.4117 -0.4114 -0.2086  0.8872  0.7607 -0.6149  0.2082     6.606   -31.955   -11.568              
         T  <A  34   THR    > matches  <A 289   THR    >                        (  7.4 A from    O1  EDO A 822  )
         K  <A  60   LYS    > matches  <A 340   LYS    >                        (  5.8 A from    O1  EDO A 822  )
         E  <A 124   GLU    > matches  <A 297   GLU    >                        ( 16.2 A from    N52 B12 A 802  )
 
KERBm  3*FOUND in 2y8n  size =    3  ^    4-HYDROXYPHENYLACETATE DECARBOXYLASE LARGE SUBUNIT;     #    4                            
  RMSD =     1.49 A
  TRANSFORM    0.2302  0.5462 -0.8054 -0.4079  0.8056  0.4298 -0.8835 -0.2296 -0.4082    -4.372   -69.074   104.068              
         T  <A  34   THR    > matches  <B  74   THR    >                        ( 10.9 A from   FE3  SF4 B  88  )
         K  <A  60   LYS    > matches  <B  44   LYS    >                        ( 10.7 A from    S3  SF4 B  87  )
         E  <A 124   GLU    > matches  <A 123   GLU    >                        ( 23.4 A from    S4  SF4 B  88  )
 
KERBm  3*FOUND in 1jg7  size =    3  ^    DNA BETA-GLUCOSYLTRANSFERASE;                           #    2                            
  RMSD =     1.49 A
  TRANSFORM    0.1103  0.8036  0.5849 -0.7895 -0.2866  0.5427 -0.6037  0.5217 -0.6028     7.228    10.616     9.466              
         T  <A  34   THR    > matches  <A 181   THR    >                        ( 16.1 A from    O4  UDP A 400  )
         K  <A  60   LYS    > matches  <A 179   LYS    >                        ( 21.8 A from    O4  UDP A 400  )
         E  <A 124   GLU    > matches  <A 218   GLU    >                        ( 17.5 A from    O4  UDP A 400  )
 
KERBm  3*FOUND in 3lss  size =    3  ^    SERYL-TRNA SYNTHETASE;                                  #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.7329 -0.4507  0.5096  0.3559 -0.3845 -0.8518 -0.5798 -0.8056  0.1214   -61.696    67.462    54.712              
         T  <A  34   THR    > matches  <A  48   THR    >                        ( 28.4 A from    O6  MLI A 602  )
         K  <A  60   LYS    > matches  <A  52   LYS    >                        ( 25.2 A from    O6  MLI A 602  )
         E  <A 124   GLU    > matches  <A  36   GLU    >                        ( 35.6 A from    O2G ATP A 501  )
 
KERBm  3*FOUND in 1xvp  size =    3  ^    RETINOIC ACID RECEPTOR RXR-ALPHA;                       #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.2850  0.2382  0.9285  0.9533  0.0304 -0.3004  0.0998 -0.9707  0.2184   -73.120   -12.952    50.091              
         T  <A  34   THR    > matches  <B 248   THR    > 
         K  <A  60   LYS    > matches  <B 251   LYS    > 
         E  <A 124   GLU    > matches  <B 324   GLU    > 
 
KERBm  3*FOUND in 5e31  size =    3  ^    PENICILLIN BINDING PROTEIN 2 PRIME;                     #    3                            
  RMSD =     1.49 A
  TRANSFORM   -0.3302 -0.3169  0.8891  0.8464  0.3175  0.4275  0.4178 -0.8937 -0.1633    49.457     6.928     3.326              
         T  <A  34   THR    > matches  <A 354   THR    > 
         K  <A  60   LYS    > matches  <A 350   LYS    > 
         E  <A 124   GLU    > matches  <A 407   GLU    > 
 
KERBm  3*FOUND in 2y6z  size =    3  ^    TRIOSE-PHOSPHATE ISOMERASE;                             #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.1912  0.7673 -0.6121  0.9815  0.1433 -0.1270  0.0097  0.6250  0.7805    48.836   -50.200    31.862              
         T  <A  34   THR    > matches  <A 163   THR    >                        ( 18.4 A from    N4A TPS A1266  )
         K  <A  60   LYS    > matches  <A 167   LYS    >                        ( 22.1 A from    N4A TPS A1266  )
         E  <A 124   GLU    > matches  <A 200   GLU    >                        ( 20.5 A from    O2  TPS A1266  )
 
KERBm  3*FOUND in 1wdd  size =    3  ^    RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN;          #    1                            
  RMSD =     1.49 A
  TRANSFORM    0.8067 -0.5793 -0.1170  0.2080  0.4636 -0.8613 -0.5532 -0.6704 -0.4945     7.737   -54.425    50.954              
         T  <A  34   THR    > matches  <A 173   THR    >                        ( -2.8 A from    O2  CAP A1001s )
         K  <A  60   LYS    > matches  <A 175   LYS    >                        ( -3.0 A from    O2  CAP A1001s )
         E  <A 124   GLU    > matches  <S  13   GLU    >                        ( 16.1 A from    N   KCX A 201  )
 
KERBm  3*FOUND in 3u83  size =    3  ^    POLIOVIRUS RECEPTOR-RELATED PROTEIN 1;                  #    1                            
  RMSD =     1.49 A
  TRANSFORM   -0.3774  0.7911 -0.4813 -0.1850  0.4449  0.8763 -0.9074 -0.4197  0.0215   -35.377    28.216   -12.023              
         T  <A  34   THR    > matches  <A 268   THR    >                        ( 55.5 A from    C1  PG6 A   1  )
         K  <A  60   LYS    > matches  <A 266   LYS    >                        ( 59.2 A from    C1  PG6 A   1  )
         E  <A 124   GLU    > matches  <A 246   GLU    >                        ( 43.7 A from    C1  PG6 A   1  )
 
KERBm  3*FOUND in 5vm1  size =    3  ^    XYLULOKINASE;                                           #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.9289 -0.2208  0.2972 -0.3348 -0.1582  0.9289  0.1581  0.9624  0.2209   -66.376   -28.396     3.761              
         T  <A  34   THR    > matches  <A 129   THR    > 
         K  <A  60   LYS    > matches  <A 132   LYS    > 
         E  <A 124   GLU    > matches  <A 205   GLU    > 
 
KERBm  3*FOUND in 1ysp  size =    3  ^    TRANSCRIPTIONAL REGULATOR KDGR;                         #    2                            
  RMSD =     1.50 A
  TRANSFORM   -0.1106  0.1550  0.9817 -0.9595  0.2407 -0.1461  0.2589  0.9581 -0.1221    28.959    51.636    -0.542              
         T  <A  34   THR    > matches  <A 161   THR    >                        (  8.4 A from    O2  SO4 A 180  )
         K  <A  60   LYS    > matches  <A 165   LYS    >                        ( -3.4 A from    O3  SO4 A 180s )
         E  <A 124   GLU    > matches  <A 149   GLU    >                        ( 24.9 A from    O2  SO4 A 180  )
 
KERBm  3*FOUND in 3o79  size =    3  ^    RABBIT PRP;                                             #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.2796 -0.7859 -0.5515  0.8192  0.4949 -0.2899 -0.5007  0.3707 -0.7822    23.137   -16.772    22.661              
         T  <A  34   THR    > matches  <A 191   THR    >                        (  7.5 A from   NA    NA A   2  )
         K  <A  60   LYS    > matches  <A 194   LYS    >                        ( 11.6 A from   NA    NA A   2  )
         E  <A 124   GLU    > matches  <A 146   GLU    >                        (  9.4 A from   NA    NA A   3  )
 
KERBm  3*FOUND in 2h8h  size =    3  ^    PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC;             #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.0670 -0.8430 -0.5338  0.8747  0.2077 -0.4379 -0.4800  0.4962 -0.7234    91.572     9.601    62.684              
         T  <A  34   THR    > matches  <A 508   THR    >                        ( 22.0 A from    O1P PTR A 527  )
         K  <A  60   LYS    > matches  <A 442   LYS    >                        ( 25.1 A from   CL3  H8H A 534  )
         E  <A 124   GLU    > matches  <A 178   GLU    >                        (  4.5 A from    O2P PTR A 527  )
 
KERBm  3*FOUND in 3l6g  size =    3  ^    BETAINE ABC TRANSPORTER PERMEASE AND SUBSTRATE BIND     #    2                            
  RMSD =     1.50 A
  TRANSFORM    0.5443 -0.5864  0.5999  0.6900  0.7196  0.0774  0.4771 -0.3718 -0.7963    -7.131   -20.188    46.217              
         T  <A  34   THR    > matches  <A 384   THR    >                        ( 22.7 A from    O4  B3P A   1  )
         K  <A  60   LYS    > matches  <A 388   LYS    >                        ( 24.1 A from    O4  B3P A   1  )
         E  <A 124   GLU    > matches  <A 443   GLU    >                        ( 34.5 A from    O2  B3P A   1  )
 
KERBm  3*FOUND in 1f1s  size =    3  ^    HYALURONATE LYASE;                                      #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.1094 -0.1174 -0.9870 -0.0809  0.9908 -0.1089 -0.9907 -0.0680  0.1179    64.677   -13.841    15.912              
         T  <A  34   THR    > matches  <A 286   THR    > 
         K  <A  60   LYS    > matches  <A 282   LYS    > 
         E  <A 124   GLU    > matches  <A 349   GLU    > 
 
KERBm  3*FOUND in 1of8  size =    3  ^    PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE,            #    2                            
  RMSD =     1.50 A
  TRANSFORM   -0.8008 -0.5989 -0.0062  0.5984 -0.7995 -0.0533 -0.0269  0.0464 -0.9986   165.168   -79.897    36.159              
         T  <A  34   THR    > matches  <A 204   THR    >                        (  6.8 A from    O1P PEP A1370  )
         K  <A  60   LYS    > matches  <A 252   LYS    >                        ( 13.2 A from    O1P PEP A1370  )
         E  <A 124   GLU    > matches  <A 189   GLU    >                        ( -2.7 A from    O3  GOL A1372s )
 
KERBm  3*FOUND in 1k1x  size =    3  ^    4-ALPHA-GLUCANOTRANSFERASE;                             #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.4362  0.3582 -0.8255 -0.8343  0.1828  0.5201 -0.3372 -0.9156 -0.2191    75.086   -51.693    72.088              
         T  <A  34   THR    > matches  <A 201   THR    >                        ( 57.5 A from   CA    CA A1601  )
         K  <A  60   LYS    > matches  <A   1+  LYS    >                        ( 61.5 A from   CA    CA A1601  )
         E  <A 124   GLU    > matches  <A 302   GLU    >                        ( 43.7 A from   CA    CA A1601  )
 
KERBm  3*FOUND in 5d0o  size =    3  ^    OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA;            #    4                            
  RMSD =     1.50 A
  TRANSFORM   -0.0916  0.6377 -0.7648  0.9906 -0.0202 -0.1356  0.1019  0.7700  0.6298    57.649   -33.324    -9.149              
         T  <A  34   THR    > matches  <D 208   THR    > 
         K  <A  60   LYS    > matches  <D 171   LYS    > 
         E  <A 124   GLU    > matches  <D 219   GLU    > 
 
KERBm  3*FOUND in 4u1e  size =    3  ^    EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT      #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.8226 -0.4961 -0.2779 -0.5686  0.7143  0.4081  0.0040 -0.4937  0.8696     6.278    48.241   -14.010              
         T  <A  34   THR    > matches  <G  33   THR    > 
         K  <A  60   LYS    > matches  <G  31   LYS    > 
         E  <A 124   GLU    > matches  <G  38   GLU    > 
 
KERBm  3*FOUND in 6d3a  size =    3  ^    POLY(ADP-RIBOSE) GLYCOHYDROLASE ARH3;                   #    2                            
  RMSD =     1.50 A
  TRANSFORM   -0.4832  0.5904  0.6465 -0.7437 -0.6665  0.0529 -0.4621  0.4552 -0.7611     0.479    19.240    64.823              
         T  <A  34   THR    > matches  <A 122   THR    >                        (  8.6 A from    O2A AR6 A 401  )
         K  <A  60   LYS    > matches  <A 126   LYS    >                        ( 12.0 A from    O1A AR6 A 401  )
         E  <A 124   GLU    > matches  <A 314   GLU    >                        ( -2.9 A from    HD1 AR6 A 401s )
 
KERBm  3*FOUND in 2w16  size =    3  ^    FERRIPYOVERDINE RECEPTOR;                               #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.7355 -0.5974 -0.3196 -0.4570 -0.0893 -0.8850 -0.5002 -0.7970  0.3387    25.303     6.908     6.760              
         T  <A  34   THR    > matches  <A 395   THR    >                        ( 12.5 A from    O1  PO4 A1821  )
         K  <A  60   LYS    > matches  <A 419   LYS    >                        ( 12.9 A from    O1  PO4 A1821  )
         E  <A 124   GLU    > matches  <A 326   GLU    >                        ( 13.4 A from    O4  PO4 A1819  )
 
KERBm  3*FOUND in 2bka  size =    3  ^    TAT-INTERACTING PROTEIN TIP30;                          #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.6366 -0.4514  0.6253 -0.7576  0.2144 -0.6165 -0.1442  0.8662  0.4785    13.679    15.868   -44.629              
         T  <A  34   THR    > matches  <A  94   THR    >                        (  4.2 A from    N7A NDP A 506  )
         K  <A  60   LYS    > matches  <A  98   LYS    >                        (  4.0 A from    O1A NDP A 506  )
         E  <A 124   GLU    > matches  <A 117   GLU    >                        (  7.7 A from    C2  GOL A 902  )
 
KERBm  3*FOUND in 3qfh  size =    3  ^    EPIDERMIN LEADER PEPTIDE PROCESSING SERINE PROTEASE     #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.9876 -0.0064  0.1572 -0.0215  0.9953 -0.0943  0.1558  0.0965  0.9831    17.577     2.970   -65.163              
         T  <A  34   THR    > matches  <A 211   THR    >                        ( 20.0 A from    O1  SO4 A 460  )
         K  <A  60   LYS    > matches  <A 135   LYS    >                        ( 15.1 A from    O1  SO4 A 460  )
         E  <A 124   GLU    > matches  <A 174   GLU    >                        ( 12.1 A from    O3  SO4 A 461  )
 
KERBm  3*FOUND in 5odw  size =    3  ^    FERRIPYOVERDINE RECEPTOR;                               #    2                            
  RMSD =     1.50 A
  TRANSFORM   -0.4245 -0.6069 -0.6720  0.8936 -0.4004 -0.2029  0.1459  0.6866 -0.7123   -43.492   -22.141    33.769              
         T  <A  34   THR    > matches  <A 395   THR    >                        ( 14.1 A from    O2  SO4 A 905  )
         K  <A  60   LYS    > matches  <A 419   LYS    >                        ( 16.4 A from    O2  SO4 A 905  )
         E  <A 124   GLU    > matches  <A 326   GLU    >                        ( 12.6 A from    O3  SO4 A 902  )
 
KERBm  3*FOUND in 4ltb  size =    3  ^    TRIPARTITE MOTIF-CONTAINING 25 VARIANT;                 #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.3190 -0.5748  0.7535  0.6280  0.4673  0.6223  0.7099 -0.6717 -0.2119    34.028     1.125    13.322              
         T  <A  34   THR    > matches  <A 258   THR    > 
         K  <A  60   LYS    > matches  <A 262   LYS    > 
         E  <A 124   GLU    > matches  <A 247   GLU    > 
 
KERBm  3*FOUND in 2cjq  size =    3  ^    RNA-DIRECTED RNA POLYMERASE;                            #    3                            
  RMSD =     1.50 A
  TRANSFORM   -0.2655  0.9640  0.0114 -0.9559 -0.2617 -0.1333  0.1255  0.0463 -0.9910   -11.834   -22.945    36.961              
         T  <A  34   THR    > matches  <A 421   THR    > 
         K  <A  60   LYS    > matches  <A 475   LYS    > 
         E  <A 124   GLU    > matches  <A 332   GLU    > 
 
KERBm  3*FOUND in 5fal  size =    3  ^    HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE                  #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.2568 -0.7935 -0.5518  0.9221  0.0302  0.3858  0.2894  0.6078 -0.7394    12.723     1.299    -8.242              
         T  <A  34   THR    > matches  <A 320   THR    >                        (  0.8 A from    CB  THR A 320  )
         K  <A  60   LYS    > matches  <A 292   LYS    >                        (  0.0 A from    NZ  LYS A 292  )
         E  <A 124   GLU    > matches  <A 348   GLU    >                        (  0.6 A from    CD  GLU A 348  )
 
KERBm  3*FOUND in 3l4j  size =    3  ^    DNA TOPOISOMERASE 2;                                    #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.0869 -0.9505 -0.2982  0.9306  0.0294 -0.3649 -0.3556  0.3092 -0.8820     4.737   -32.853    33.269              
         T  <A  34   THR    > matches  <A 525   THR    >                        ( 33.4 A from    N  APTR A 782  )
         K  <A  60   LYS    > matches  <A 535   LYS    >                        ( 37.3 A from    N  APTR A 782  )
         E  <A 124   GLU    > matches  <A 738   GLU    >                        ( 16.1 A from    N  APTR A 782  )
 
KERBm  3*FOUND in 4uox  size =    3  ^    PUTRESCINE AMINOTRANSFERASE;                            #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.8134  0.0645  0.5781 -0.4926  0.4524 -0.7435  0.3095  0.8895  0.3362    46.689   -51.196   -14.503              
         T  <A  34   THR    > matches  <A 255   THR    >                        ( 20.2 A from    C2A PLP A 800  )
         K  <A  60   LYS    > matches  <A 259   LYS    >                        ( 23.0 A from    C2A PLP A 800  )
         E  <A 124   GLU    > matches  <A 360   GLU    >                        ( 21.4 A from    C2A PLP A 800  )
 
KERBm  3*FOUND in 4h59  size =    3  ^    IRON-COMPOUND ABC TRANSPORTER, IRON COMPOUND-BINDIN     #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.9999 -0.0149  0.0027  0.0150 -0.9497  0.3127  0.0020 -0.3127 -0.9499    91.230     3.572    68.665              
         T  <A  34   THR    > matches  <A 226   THR    >                        ( 10.7 A from    C5 BB3P A 401  )
         K  <A  60   LYS    > matches  <A 228   LYS    >                        ( 12.8 A from    C7 AB3P A 401  )
         E  <A 124   GLU    > matches  <A 262   GLU    >                        ( 24.3 A from    C5 BB3P A 401  )
 
KERBm  3*FOUND in 3ty7  size =    3  ^    PUTATIVE ALDEHYDE DEHYDROGENASE SAV2122;                #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.8674 -0.2562 -0.4266  0.4006 -0.1492  0.9040  0.2953  0.9550  0.0268     0.050   -48.589   -23.652              
         T  <A  34   THR    > matches  <A 280   THR    >                        ( 20.9 A from    O1  GOL A 481  )
         K  <A  60   LYS    > matches  <A 270   LYS    >                        ( 27.9 A from    O1  GOL A 481  )
         E  <A 124   GLU    > matches  <A 463   GLU    >                        ( 10.3 A from    O2  GOL A 481  )
 
KERBm  3*FOUND in 4kh3  size =    3  ^    ANTIGEN 43;                                             #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.5938  0.7901 -0.1522  0.7915 -0.6076 -0.0664  0.1449  0.0810  0.9861   -56.994    55.241   -51.217              
         T  <A  34   THR    > matches  <A 133   THR    >                        (  8.0 A from    O9  MLI A 603  )
         K  <A  60   LYS    > matches  <A 112   LYS    >                        ( -5.6 A from    O6  MLI A 604s )
         E  <A 124   GLU    > matches  <A 216   GLU    >                        (  8.0 A from    O9  MLI A 606  )
 
KERBm  3*FOUND in 4tmv  size =    3  ^    EIF5B;                                                  #    3                            
  RMSD =     1.50 A
  TRANSFORM   -0.3032  0.8594 -0.4116  0.5547 -0.1920 -0.8096  0.7748  0.4738  0.4186    31.490   -60.972    40.308              
         T  <A  34   THR    > matches  <A 719   THR    >                        (  6.7 A from    O6  GSP A 901  )
         K  <A  60   LYS    > matches  <A 658   LYS    >                        ( 11.9 A from    N1  GSP A 901  )
         E  <A 124   GLU    > matches  <A 626   GLU    >                        (  9.4 A from    O1B GSP A 901  )
 
KERBm  3*FOUND in 1rwz  size =    3  ^    DNA POLYMERASE SLIDING CLAMP;                           #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.9595 -0.1581 -0.2331  0.2206 -0.9365 -0.2727  0.1752  0.3131 -0.9334    46.943    35.616    14.285              
         T  <A  34   THR    > matches  <A 212   THR    > 
         K  <A  60   LYS    > matches  <A 130   LYS    > 
         E  <A 124   GLU    > matches  <A   9   GLU    > 
 
KERBm  3*FOUND in 4yfs  size =    3  ^    DUFFY RECEPTOR;                                         #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.3567  0.2901  0.8880 -0.0392  0.9544 -0.2961  0.9334 -0.0708 -0.3518    19.078   -10.962    14.864              
         T  <A  34   THR    > matches  <A 193   THR    > 
         K  <A  60   LYS    > matches  <A 197   LYS    > 
         E  <A 124   GLU    > matches  <A 268   GLU    > 
 
KERBm  3*FOUND in 4ask  size =    3  ^    LYSINE-SPECIFIC DEMETHYLASE 6B;                         #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.1945  0.7388 -0.6453 -0.5014  0.6403  0.5819 -0.8431 -0.2104 -0.4949   -10.912    25.784    45.976              
         T  <A  34   THR    > matches  <A1275   THR    >                        ( 14.4 A from    C22 K0I A2639  )
         K  <A  60   LYS    > matches  <A1279   LYS    >                        ( 20.7 A from    C22 K0I A2639  )
         E  <A 124   GLU    > matches  <A1269   GLU    >                        (  7.6 A from    C17 K0I A2639  )
 
KERBm  3*FOUND in 3t9g  size =    3  ^    PECTATE LYASE;                                          #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.8402 -0.2453 -0.4837  0.4770 -0.0901  0.8743  0.2580  0.9653 -0.0413    28.411   -17.574   -35.829              
         T  <A  34   THR    > matches  <A  88   THR    >                        (  4.8 A from   NA    NA A 206  )
         K  <A  60   LYS    > matches  <A  90   LYS    >                        (  7.1 A from   NA    NA A 206  )
         E  <A 124   GLU    > matches  <A 104   GLU    >                        ( -6.6 A from   CA    CA A 201s )
 
KERBm  3*FOUND in 1pn0  size =    3  ^    PHENOL 2-MONOOXYGENASE;                                 #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.4877  0.7618  0.4264  0.4675  0.1846 -0.8645  0.7373 -0.6210  0.2661   -79.907   -26.067   -16.059              
         T  <A  34   THR    > matches  <A 465   THR    >                        ( 23.9 A from    O1P FAD A6011  )
         K  <A  60   LYS    > matches  <A 467   LYS    >                        ( 26.2 A from    O1P FAD A6011  )
         E  <A 124   GLU    > matches  <A 155   GLU    >                        ( 25.7 A from    O1P FAD A6011  )
 
KERBm  3*FOUND in 3qke  size =    3  ^    MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME;         #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.8800 -0.4746 -0.0200  0.1688  0.3518 -0.9207 -0.4441 -0.8068 -0.3896    23.971   -93.604   -43.873              
         T  <A  34   THR    > matches  <A  26   THR    >                        ( 31.8 A from    O6  GCO A 406  )
         K  <A  60   LYS    > matches  <A   3+  LYS    >                        ( 34.5 A from    O6  GCO A 406  )
         E  <A 124   GLU    > matches  <A 380   GLU    >                        ( 28.5 A from    O6  GCO A 406  )
 
KERBm  3*FOUND in 2rc5  size =    3  ^    FERREDOXIN-NADP REDUCTASE;                              #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.4588  0.1368 -0.8780  0.8813 -0.0562 -0.4693  0.1136  0.9890  0.0947    36.313     2.150    -4.463              
         T  <A  34   THR    > matches  <A 148   THR    >                        ( 13.8 A from    O1P FAD A 415  )
         K  <A  60   LYS    > matches  <A  23   LYS    >                        ( 18.6 A from    O1P FAD A 415  )
         E  <A 124   GLU    > matches  <A  80   GLU    >                        ( -8.4 A from    N7A FAD A 415s )
 
KERBm  3*FOUND in 5l9w  size =    3  ^    ACETOPHENONE CARBOXYLASE DELTA SUBUNIT;                 #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.2230 -0.2704  0.9366 -0.9129  0.3948 -0.1034  0.3418  0.8781  0.3349    77.739   147.757  -116.631              
         T  <A  34   THR    > matches  <A 429   THR    >                        ( 21.0 A from   HG    HG C 201  )
         K  <A  60   LYS    > matches  <A 386   LYS    >                        ( 23.4 A from   HG    HG C 201  )
         E  <A 124   GLU    > matches  <A 598   GLU    >                        ( 25.4 A from    O8  EPE b 802  )
 
KERBm  3*FOUND in 3o1q  size =    3  ^    UREASE ACCESSORY PROTEIN UREF;                          #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.1398  0.2366 -0.9615  0.2981  0.9159  0.2687 -0.9443  0.3242 -0.0575    31.235   -11.607     6.083              
         T  <A  34   THR    > matches  <A 222   THR    > 
         K  <A  60   LYS    > matches  <A  90   LYS    > 
         E  <A 124   GLU    > matches  <A  71   GLU    > 
 
KERBm  3*FOUND in 2gnx  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    2                            
  RMSD =     1.50 A
  TRANSFORM    0.6204 -0.7308  0.2846 -0.7787 -0.5307  0.3346  0.0935  0.4292  0.8983    34.990    49.759   -45.949              
         T  <A  34   THR    > matches  <A 290   THR    > 
         K  <A  60   LYS    > matches  <A 287   LYS    > 
         E  <A 124   GLU    > matches  <A 399   GLU    > 
 
KERBm  3*FOUND in 2p5v  size =    3  ^    TRANSCRIPTIONAL REGULATOR, LRP/ASNC FAMILY;             #    2                            
  RMSD =     1.50 A
  TRANSFORM    0.0363 -0.9035 -0.4270 -0.9929 -0.0810  0.0869  0.1131 -0.4209  0.9000    63.401    -1.404   -47.932              
         T  <A  34   THR    > matches  <A 149   THR    >                        ( 19.2 A from    C1  GOL A 904  )
         K  <A  60   LYS    > matches  <A 147   LYS    >                        ( 20.6 A from    C1  GOL A 904  )
         E  <A 124   GLU    > matches  <A  47   GLU    >                        ( 16.6 A from    O3  GOL A 904  )
 
KERBm  3*FOUND in 5d5n  size =    3  ^    VIRION EGRESS PROTEIN UL34 HOMOLOG;                     #    1                            
  RMSD =     1.50 A
  TRANSFORM   -0.8951 -0.1179  0.4300  0.4441 -0.3208  0.8366 -0.0393 -0.9398 -0.3395    47.131    -9.658    53.034              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 21.9 A from   ZN    ZN B 301  )
         K  <A  60   LYS    > matches  <A 123   LYS    >                        ( 25.8 A from   ZN    ZN B 301  )
         E  <A 124   GLU    > matches  <A  25   GLU    >                        ( 28.8 A from   ZN    ZN B 301  )
 
KERBm  3*FOUND in 2fj0  size =    3  ^    CARBOXYLIC ESTER HYDROLASE;                             #    2                            
  RMSD =     1.50 A
  TRANSFORM   -0.3843 -0.7887 -0.4798  0.7015 -0.5874  0.4036  0.6001  0.1815 -0.7790   101.468   -12.272    40.634              
         T  <A  34   THR    > matches  <A 505   THR    >                        ( 19.8 A from    F1  TFC A 600  )
         K  <A  60   LYS    > matches  <A 166   LYS    >                        ( 25.9 A from    F1  TFC A 600  )
         E  <A 124   GLU    > matches  <A 357   GLU    >                        (  8.0 A from    C9  TFC A 600  )
 
KERBm  3*FOUND in 5j53  size =    3  ^    CAROTENOID OXYGENASE;                                   #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.9848  0.1606 -0.0654  0.1733 -0.9290  0.3271  0.0083  0.3334  0.9427   -11.897    14.703   -45.093              
         T  <A  34   THR    > matches  <A 118   THR    >                        ( 12.1 A from    O2  OXY A 502  )
         K  <A  60   LYS    > matches  <A  86   LYS    >                        ( 17.3 A from    O2  OXY A 502  )
         E  <A 124   GLU    > matches  <A 418   GLU    >                        (  6.9 A from   FE    FE A 501  )
 
KERBm  3*FOUND in 1xff  size =    3  ^    GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE                       #    1                            
  RMSD =     1.50 A
  TRANSFORM    0.7140  0.5522 -0.4305 -0.2132 -0.4141 -0.8849  0.6669 -0.7236  0.1779     9.146    16.072    34.803              
         T  <A  34   THR    > matches  <A  72   THR    >                        (  7.5 A from    OE2 GLU A5300  )
         K  <A  60   LYS    > matches  <A   1+  LYS    >                        ( -4.9 A from    OE2 GLU A5300s )
         E  <A 124   GLU    > matches  <A  60   GLU    >                        ( 25.2 A from    O   GLU A5300  )
 
KERBm  3*FOUND in 4l2i  size =    3  ^    ELECTRON TRANSFER FLAVOPROTEIN ALPHA SUBUNIT;           #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.6625  0.1634  0.7310 -0.1656  0.9198 -0.3557  0.7305  0.3567  0.5823    11.507   -22.842     1.305              
         T  <A  34   THR    > matches  <A 156   THR    >                        ( 10.0 A from    C6  FAD B 301  )
         K  <A  60   LYS    > matches  <B 225   LYS    >                        ( 13.1 A from    C7M FAD B 301  )
         E  <A 124   GLU    > matches  <A  32   GLU    >                        ( 19.4 A from    O4  FAD B 301  )
 
KERBm  3*FOUND in 1u5u  size =    3  ^    ALLENE OXIDE SYNTHASE-LIPOXYGENASE PROTEIN;             #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.8756 -0.4782 -0.0682  0.1980 -0.2264 -0.9537 -0.4406  0.8485 -0.2929    66.404    27.078     9.657              
         T  <A  34   THR    > matches  <A  68   THR    >                        (  8.4 A from    CAD HEM A 999  )
         K  <A  60   LYS    > matches  <A  60   LYS    >                        (  8.7 A from    CAD HEM A 999  )
         E  <A 124   GLU    > matches  <A 257   GLU    >                        ( 17.1 A from    O2A HEM A 999  )
 
KERBm  3*FOUND in 3bk7  size =    3  ^    ABC TRANSPORTER ATP-BINDING PROTEIN;                    #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.3746  0.7730 -0.5120 -0.9240 -0.2654  0.2753 -0.0769 -0.5763 -0.8136    -4.221   -29.249   -21.746              
         T  <A  34   THR    > matches  <A 382   THR    >                        ( -3.8 A from    O1B ADP A 598s )
         K  <A  60   LYS    > matches  <A 386   LYS    >                        (  5.2 A from    N7  ADP A 598  )
         E  <A 124   GLU    > matches  <A 203   GLU    >                        ( 13.7 A from    O3B ADP A 598  )
 
KERBm  3*FOUND in 3sri  size =    3  ^    APICAL MEMBRANE ANTIGEN 1;                              #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.1901  0.8187 -0.5418  0.3165  0.5735  0.7556 -0.9293  0.0278  0.3682    41.706   -16.070    37.295              
         T  <A  34   THR    > matches  <A 163   THR    > 
         K  <A  60   LYS    > matches  <A 167   LYS    > 
         E  <A 124   GLU    > matches  <A 336   GLU    > 
 
KERBm  3*FOUND in 4tmv  size =    3  ^    EIF5B;                                                  #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.3509  0.9346  0.0576 -0.3198 -0.0619 -0.9455  0.8801  0.3502 -0.3206    67.600   -56.434     2.950              
         T  <A  34   THR    > matches  <A 534   THR    >                        ( -4.3 A from    O1B GSP A 901s )
         K  <A  60   LYS    > matches  <A 649   LYS    >                        ( -3.1 A from    O4' GSP A 901s )
         E  <A 124   GLU    > matches  <A 638   GLU    >                        ( 19.1 A from    O2G GSP A 901  )
 
KERBm  3*FOUND in 2ba0  size =    3  ^    ARCHAEAL EXOSOME RNA BINDING PROTEIN RRP4;              #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.2960 -0.7774 -0.5550 -0.5948 -0.6047  0.5297  0.7474 -0.1733  0.6414   106.237    75.766     1.819              
         T  <A  34   THR    > matches  <A 123   THR    > 
         K  <A  60   LYS    > matches  <A 121   LYS    > 
         E  <A 124   GLU    > matches  <A  92   GLU    > 
 
KERBm  3*FOUND in 3ehg  size =    3  ^    SENSOR KINASE (YOCF PROTEIN);                           #    2                            
  RMSD =     1.51 A
  TRANSFORM    0.6617  0.6890  0.2957  0.6764 -0.7187  0.1609 -0.3234 -0.0935  0.9416   -13.120     6.930    20.037              
         T  <A  34   THR    > matches  <A 317   THR    >                        (  9.7 A from    I   IOD A   9  )
         K  <A  60   LYS    > matches  <A 360   LYS    >                        (  7.3 A from    I   IOD A   9  )
         E  <A 124   GLU    > matches  <A 273   GLU    >                        ( 20.1 A from    I   IOD A   5  )
 
KERBm  3*FOUND in 2ov0  size =    3  ^    AMICYANIN;                                              #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.6124 -0.6989 -0.3695 -0.2572  0.6181 -0.7429 -0.7475  0.3599  0.5582    35.047    14.875    38.919              
         T  <A  34   THR    > matches  <A   4   THR    >                        (  5.0 A from    O4  PO4 A 311  )
         K  <A  60   LYS    > matches  <A   1+  LYS    >                        ( 11.1 A from    O4  PO4 A 311  )
         E  <A 124   GLU    > matches  <A  15   GLU    >                        ( 15.5 A from    O3  PO4 A 311  )
 
KERBm  3*FOUND in 4jdo  size =    3  ^    VIRULENCE PLASMID PROTEIN PGP3-D;                       #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.5618  0.0016 -0.8273 -0.4226  0.8591  0.2887 -0.7112 -0.5118  0.4820    57.373    35.725    44.681              
         T  <A  34   THR    > matches  <A 155   THR    >                        ( 41.8 A from   NA    NA A 301  )
         K  <A  60   LYS    > matches  <A 157   LYS    >                        ( 42.9 A from   NA    NA A 301  )
         E  <A 124   GLU    > matches  <A 148   GLU    >                        ( 30.5 A from   NA    NA A 301  )
 
KERBm  3*FOUND in 3mmh  size =    3  ^    METHIONINE-R-SULFOXIDE REDUCTASE;                       #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.5528  0.8280  0.0940  0.8195 -0.5198 -0.2414  0.1510 -0.2105  0.9659   -27.506    -9.550     5.403              
         T  <A  34   THR    > matches  <A  94   THR    >                        ( -4.5 A from    O2  MRD A 177s )
         K  <A  60   LYS    > matches  <A  91   LYS    >                        (  4.4 A from    C1  MRD A 177  )
         E  <A 124   GLU    > matches  <A  23   GLU    >                        ( 13.0 A from    O   ACT A 179  )
 
KERBm  3*FOUND in 1y4w  size =    3  ^    EXO-INULINASE;                                          #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.5549 -0.6266  0.5473  0.4626  0.7791  0.4230  0.6915 -0.0185 -0.7222    23.839   -12.929    26.301              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 14.4 A from    C8  NAG A2001  )
         K  <A  60   LYS    > matches  <A 200   LYS    >                        ( 12.9 A from    N2  NAG A2001  )
         E  <A 124   GLU    > matches  <A 181   GLU    >                        ( 21.8 A from    O1  GOL A6001  )
 
KERBm  3*FOUND in 2r9i  size =    3  ^    PUTATIVE PHAGE CAPSID PROTEIN;                          #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.6163 -0.0453  0.7862  0.5045  0.7439  0.4383  0.6047 -0.6667  0.4356    17.486   -49.803    37.969              
         T  <A  34   THR    > matches  <A  64   THR    > 
         K  <A  60   LYS    > matches  <A  68   LYS    > 
         E  <A 124   GLU    > matches  <A  52   GLU    > 
 
KERBm  3*FOUND in 2cfo  size =    3  ^    GLUTAMYL-TRNA SYNTHETASE;                               #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.0478  0.8952 -0.4430 -0.2607  0.4170  0.8707 -0.9642 -0.1571 -0.2135    32.915   -21.613    29.936              
         T  <A  34   THR    > matches  <A  88   THR    >                        ( 21.4 A from    OE2 GLU A1486  )
         K  <A  60   LYS    > matches  <A  92   LYS    >                        ( 22.9 A from    OE2 GLU A1486  )
         E  <A 124   GLU    > matches  <A  42   GLU    >                        (  4.9 A from    CG  GLU A1486  )
 
KERBm  3*FOUND in 3ui3  size =    3  ^    IMMUNOGLOBULIN G-BINDING PROTEIN G, VIRULENCE-ASSOC     #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.4003  0.4222 -0.8133 -0.7817  0.3058  0.5435 -0.4782 -0.8533 -0.2077    49.845     8.426    48.423              
         T  <A  34   THR    > matches  <A 147   THR    > 
         K  <A  60   LYS    > matches  <A 151   LYS    > 
         E  <A 124   GLU    > matches  <A  96   GLU    > 
 
KERBm  3*FOUND in 4s3j  size =    3  ^    CORTICAL-LYTIC ENZYME;                                  #    2                            
  RMSD =     1.51 A
  TRANSFORM   -0.2758 -0.2438  0.9298  0.5626  0.7433  0.3618  0.7794 -0.6229  0.0678   -83.972   -55.529    54.479              
         T  <A  34   THR    > matches  <A 166   THR    >                        ( 26.8 A from    H21 EDO A 501  )
         K  <A  60   LYS    > matches  <A 428   LYS    >                        ( 24.1 A from    H21 EDO A 501  )
         E  <A 124   GLU    > matches  <A 150   GLU    >                        ( 45.4 A from    H21 EDO A 501  )
 
KERBm  3*FOUND in 3wu4  size =    3  ^    LON PROTEASE;                                           #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.6033 -0.0136  0.7974 -0.5747 -0.6859 -0.4465 -0.5530  0.7276 -0.4060     9.158    15.957  -103.011              
         T  <A  34   THR    > matches  <A 625   THR    > 
         K  <A  60   LYS    > matches  <A 623   LYS    > 
         E  <A 124   GLU    > matches  <A 670   GLU    > 
 
KERBm  3*FOUND in 4ewc  size =    3  ^    PUTATIVE NUCLEOPROTEIN;                                 #    2                            
  RMSD =     1.51 A
  TRANSFORM   -0.8699 -0.2918  0.3977  0.2072 -0.9478 -0.2422 -0.4477  0.1282 -0.8850    78.614    -7.012    94.362              
         T  <A  34   THR    > matches  <A 379   THR    > 
         K  <A  60   LYS    > matches  <A 381   LYS    > 
         E  <A 124   GLU    > matches  <A 344   GLU    > 
 
KERBm  3*FOUND in 2pg0  size =    3  ^    ACYL-COA DEHYDROGENASE;                                 #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.9032  0.4164 -0.1038  0.2497  0.3133 -0.9163  0.3490  0.8535  0.3869   -23.091    -7.637   -34.942              
         T  <A  34   THR    > matches  <A 330   THR    >                        ( 12.0 A from    C4' FAD A 401  )
         K  <A  60   LYS    > matches  <A 326   LYS    >                        (  7.9 A from    C4' FAD A 401  )
         E  <A 124   GLU    > matches  <A 351   GLU    >                        ( 16.4 A from    C7M FAD A 401  )
 
KERBm  3*FOUND in 4b7c  size =    3  ^    PROBABLE OXIDOREDUCTASE;                                #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.5991  0.1822 -0.7797 -0.3968 -0.7783 -0.4867  0.6955 -0.6009  0.3940    14.136   -15.170   -11.921              
         T  <A  34   THR    > matches  <A 317   THR    > 
         K  <A  60   LYS    > matches  <A 320   LYS    > 
         E  <A 124   GLU    > matches  <A  28   GLU    > 
 
KERBm  3*FOUND in 4gmo  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.8759 -0.3279  0.3538  0.0119 -0.7185 -0.6954 -0.4823 -0.6134  0.6254   -33.987    12.588   -16.124              
         T  <A  34   THR    > matches  <A  52   THR    > 
         K  <A  60   LYS    > matches  <A  49   LYS    > 
         E  <A 124   GLU    > matches  <A 204   GLU    > 
 
KERBm  3*FOUND in 5l3s  size =    3  ^    SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN;             #    2                            
  RMSD =     1.51 A
  TRANSFORM    0.1570  0.6878  0.7088  0.9084 -0.3821  0.1696 -0.3875 -0.6172  0.6848   -23.453   -16.590    -6.395              
         T  <A  34   THR    > matches  <A 111   THR    >                        ( -3.7 A from    O2A GNP A 301s )
         K  <A  60   LYS    > matches  <A 115   LYS    >                        ( -3.1 A from    O6  GNP A 301s )
         E  <A 124   GLU    > matches  <A 195   GLU    >                        ( -4.2 A from    N2  GNP B 401s )
 
KERBm  3*FOUND in 2bkl  size =    3  ^    PROLYL ENDOPEPTIDASE;                                   #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.5490  0.1397  0.8241  0.2080 -0.9778  0.0272 -0.8096 -0.1565  0.5658    35.941    15.773   -30.403              
         T  <A  34   THR    > matches  <A  69   THR    >                        ( 24.8 A from    O9  ZAH A1533  )
         K  <A  60   LYS    > matches  <A  89   LYS    >                        ( 32.0 A from    O9  ZAH A1533  )
         E  <A 124   GLU    > matches  <A 461   GLU    >                        ( 14.4 A from    C11 ZAH A1533  )
 
KERBm  3*FOUND in 5ktn  size =    3  ^    QUINOLINATE SYNTHASE A;                                 #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.2460 -0.8483  0.4689  0.9675 -0.1859  0.1712  0.0580 -0.4958 -0.8665    43.690   -11.414    59.457              
         T  <A  34   THR    > matches  <A 157   THR    >                        ( 16.5 A from    N   NH4 A 405  )
         K  <A  60   LYS    > matches  <A 159   LYS    >                        ( 10.1 A from    N   NH4 A 405  )
         E  <A 124   GLU    > matches  <A 222   GLU    >                        ( 13.7 A from   CL    CL A 404  )
 
KERBm  3*FOUND in 2epl  size =    3  ^    N-ACETYL-BETA-D-GLUCOSAMINIDASE;                        #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.2778 -0.4380 -0.8550  0.7590  0.6457 -0.0842 -0.5889  0.6255 -0.5118    23.496  -102.182    31.286              
         T  <A  34   THR    > matches  <X 291   THR    >                        ( 28.3 A from    O1  SO4 X 744  )
         K  <A  60   LYS    > matches  <X 288+  LYS    >                        ( 32.4 A from    O1  SO4 X 744  )
         E  <A 124   GLU    > matches  <X 197   GLU    >                        ( 23.7 A from    O2  SO4 X 744  )
 
KERBm  3*FOUND in 5djw  size =    3  ^    ALPHA-GLUCOSIDASE II;                                   #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.3618 -0.9099 -0.2028 -0.5858 -0.3911  0.7098  0.7252  0.1380  0.6746    85.521   -50.057    -0.360              
         T  <A  34   THR    > matches  <A  80   THR    > 
         K  <A  60   LYS    > matches  <A  82   LYS    > 
         E  <A 124   GLU    > matches  <A  60   GLU    > 
 
KERBm  3*FOUND in 1cid  size =    3  ^    T CELL SURFACE GLYCOPROTEIN CD4;                        #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.1330 -0.8605 -0.4918  0.0690 -0.4870  0.8707  0.9887  0.1497  0.0054    69.626    -7.348    16.534              
         T  <A  34   THR    > matches  <A  59   THR    >                        ( 45.6 A from    S   SO4 A 202  )
         K  <A  60   LYS    > matches  <A  57   LYS    >                        ( 50.6 A from    S   SO4 A 202  )
         E  <A 124   GLU    > matches  <A   9   GLU    >                        ( 26.6 A from    S   SO4 A 202  )
 
KERBm  3*FOUND in 2oyh  size =    3  ^    FIBRINOGEN ALPHA CHAIN;                                 #    2                            
  RMSD =     1.51 A
  TRANSFORM   -0.9508  0.0023  0.3097 -0.2359  0.6427 -0.7289  0.2007  0.7661  0.6105    37.545    14.854   -10.592              
         T  <A  34   THR    > matches  <B 280   THR    >                        ( 43.1 A from   CA    CA B   2  )
         K  <A  60   LYS    > matches  <B 283   LYS    >                        ( 49.7 A from   CA    CA B   2  )
         E  <A 124   GLU    > matches  <B 315   GLU    >                        ( 29.4 A from    O4  FUC B   5  )
 
KERBm  3*FOUND in 4gfu  size =    3  ^    TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 18;      #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.8081  0.1661 -0.5652  0.5158  0.6628 -0.5428 -0.2845  0.7301  0.6213   107.266   205.195   245.861              
         T  <A  34   THR    > matches  <A 179   THR    > 
         K  <A  60   LYS    > matches  <A 177   LYS    > 
         E  <A 124   GLU    > matches  <A  80   GLU    > 
 
KERBm  3*FOUND in 4izh  size =    3  ^    NAD/NADP TRANSHYDROGENASE ALPHA SUBUNIT 1;              #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.6613 -0.1687  0.7309  0.5147 -0.6068 -0.6057 -0.5457 -0.7767  0.3145   -33.334   -50.653    32.568              
         T  <A  34   THR    > matches  <A 279   THR    >                        ( 10.6 A from    C3  GOL A 407  )
         K  <A  60   LYS    > matches  <A 276   LYS    >                        (  5.9 A from    C3  GOL A 407  )
         E  <A 124   GLU    > matches  <A 317   GLU    >                        (  5.5 A from    O2  GOL A 402  )
 
KERBm  3*FOUND in 3a0y  size =    3  ^    SENSOR PROTEIN;                                         #    1                            
  RMSD =     1.51 A
  TRANSFORM   -0.5254 -0.5814 -0.6211 -0.8073  0.5712  0.1482 -0.2686 -0.5794  0.7695    84.954     8.692    59.743              
         T  <A  34   THR    > matches  <A 735   THR    > 
         K  <A  60   LYS    > matches  <A 699   LYS    > 
         E  <A 124   GLU    > matches  <A 636   GLU    > 
 
KERBm  3*FOUND in 3kog  size =    3  ^    PUTATIVE PORE-FORMING TOXIN;                            #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.0444 -0.9965 -0.0713  0.8709  0.0036  0.4914  0.4894  0.0839 -0.8680    66.542   -58.406    43.590              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 10.6 A from    O2  GOL A   4  )
         K  <A  60   LYS    > matches  <A 215   LYS    >                        ( 13.5 A from    O2  GOL A   4  )
         E  <A 124   GLU    > matches  <A 172   GLU    >                        (  9.6 A from    OXT ACT A   1  )
 
KERBm  3*FOUND in 4b89  size =    3  ^    GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT     #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.5850  0.7068  0.3976 -0.3126  0.6489 -0.6937  0.7484 -0.2815 -0.6006   -13.776   -31.732    13.971              
         T  <A  34   THR    > matches  <A 836   THR    > 
         K  <A  60   LYS    > matches  <A 840   LYS    > 
         E  <A 124   GLU    > matches  <A 789   GLU    > 
 
KERBm  3*FOUND in 4i62  size =    3  ^    AMINO ACID ABC TRANSPORTER, PERIPLASMIC AMINO ACID-     #    1                            
  RMSD =     1.51 A
  TRANSFORM    0.0275  0.2849 -0.9582  0.8716  0.4626  0.1625 -0.4895  0.8395  0.2356    51.883   -29.645    -5.857              
         T  <A  34   THR    > matches  <A 244   THR    >                        ( 14.5 A from   CL    CL A 303  )
         K  <A  60   LYS    > matches  <A 247   LYS    >                        ( 18.7 A from   CL    CL A 303  )
         E  <A 124   GLU    > matches  <A  83   GLU    >                        ( 18.4 A from    NH1 ARG A 301  )
 
KERBm  3*FOUND in 5wwl  size =    3  ^    CENTROMERE PROTEIN MIS12;                               #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.4033  0.4547 -0.7941 -0.6402  0.4799  0.6000 -0.6538 -0.7503 -0.0975    11.598   -23.221    99.425              
         T  <A  34   THR    > matches  <M 203   THR    > 
         K  <A  60   LYS    > matches  <M 207   LYS    > 
         E  <A 124   GLU    > matches  <M 139   GLU    > 
 
KERBm  3*FOUND in 4zla  size =    3  ^    CYTOSOL AMINOPEPTIDASE;                                 #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.3028 -0.9495  0.0820 -0.1433 -0.1304 -0.9811 -0.9422 -0.2853  0.1755     6.721   -47.706    59.368              
         T  <A  34   THR    > matches  <A  80   THR    >                        ( 26.1 A from   NA    NA A 503  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        ( 24.2 A from   NA    NA A 503  )
         E  <A 124   GLU    > matches  <A  45   GLU    >                        ( 35.0 A from   NA    NA A 503  )
 
KERBm  3*FOUND in 5xoz  size =    3  ^    TRYPSIN PROTEIN INHIBITOR 2;                            #    2                            
  RMSD =     1.52 A
  TRANSFORM    0.3694  0.0263 -0.9289 -0.3939  0.9098 -0.1309 -0.8417 -0.4142 -0.3464    42.144   -27.326    32.569              
         T  <A  34   THR    > matches  <A  84   THR    > 
         K  <A  60   LYS    > matches  <A  12+  LYS    > 
         E  <A 124   GLU    > matches  <A 179   GLU    > 
 
KERBm  3*FOUND in 4yhc  size =    3  ^    STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-     #    2                            
  RMSD =     1.52 A
  TRANSFORM   -0.6872  0.5511 -0.4734 -0.6416 -0.1546  0.7513 -0.3409 -0.8200 -0.4598    61.110   -81.428    99.695              
         T  <A  34   THR    > matches  <A 857   THR    >                        ( 25.7 A from    O1  CIT A1101  )
         K  <A  60   LYS    > matches  <A 829   LYS    >                        ( 31.0 A from    O1  CIT A1101  )
         E  <A 124   GLU    > matches  <A 997   GLU    >                        ( 21.9 A from    O1  CIT A1101  )
 
KERBm  3*FOUND in 5u97  size =    3  ^    CAROTENOID OXYGENASE 1;                                 #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.6758 -0.5586 -0.4809 -0.6631  0.1757  0.7276  0.3220 -0.8106  0.4892    72.966   -50.129    68.513              
         T  <A  34   THR    > matches  <A 148   THR    >                        (  6.9 A from    OAD PIT A 602  )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        ( 12.1 A from    OAD PIT A 602  )
         E  <A 124   GLU    > matches  <A 453   GLU    >                        (  6.9 A from   CO    CO A 601  )
 
KERBm  3*FOUND in 5ixp  size =    3  ^    EXTRACELLULAR SOLUTE-BINDING PROTEIN FAMILY 1;          #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.1480 -0.5127  0.8457  0.5478 -0.6695 -0.5017 -0.8234 -0.5375 -0.1818    60.945    48.641    67.502              
         T  <A  34   THR    > matches  <A  74   THR    >                        ( 25.0 A from    O1  FMT A 501  )
         K  <A  60   LYS    > matches  <A  72   LYS    >                        ( 27.4 A from    O1  FMT A 501  )
         E  <A 124   GLU    > matches  <A  83   GLU    >                        ( 15.1 A from    O2  FMT A 503  )
 
KERBm  3*FOUND in 4grx  size =    3  ^    AMINOTRANSFERASE;                                       #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.0110 -0.9773 -0.2117  0.6403 -0.1695  0.7492  0.7680  0.1274 -0.6276    66.514   -42.530    35.342              
         T  <A  34   THR    > matches  <A 406   THR    >                        ( 18.8 A from    OT2 DAV A 502  )
         K  <A  60   LYS    > matches  <A 447   LYS    >                        ( 24.6 A from    OT2 DAV A 502  )
         E  <A 124   GLU    > matches  <A  12   GLU    >                        ( 19.9 A from    OT2 DAV A 502  )
 
KERBm  3*FOUND in 3c10  size =    3  ^    HISTONE DEACETYLASE 7A;                                 #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.8319  0.5134  0.2108 -0.0440 -0.4397  0.8971 -0.5532 -0.7370 -0.3884    23.337    -0.456    35.076              
         T  <A  34   THR    > matches  <A 520   THR    >                        ( 23.0 A from    K     K A 201  )
         K  <A  60   LYS    > matches  <A 658   LYS    >                        ( 24.9 A from    K     K A 201  )
         E  <A 124   GLU    > matches  <A 557   GLU    >                        ( 23.9 A from    O2  TSN A 301  )
 
KERBm  3*FOUND in 4cd8  size =    3  ^    ENDO-BETA-1,4-MANNANASE;                                #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.2871  0.8842  0.3685 -0.6167 -0.4650  0.6352 -0.7330  0.0448 -0.6788    46.099    -7.450    20.292              
         T  <A  34   THR    > matches  <A  95   THR    >                        (  6.1 A from    O2  MVL A 400  )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        (  4.9 A from    O2  MVL A 400  )
         E  <A 124   GLU    > matches  <A 112   GLU    >                        ( 23.8 A from    O2  MVL A 400  )
 
KERBm  3*FOUND in 3mzg  size =    3  ^    PROLACTIN;                                              #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.5338  0.5116  0.6733  0.3223 -0.6130  0.7213 -0.7818 -0.6021 -0.1624    20.580   -25.973   -31.486              
         T  <A  34   THR    > matches  <B 141   THR    >                        ( 16.1 A from   CL    CL B 212  )
         K  <A  60   LYS    > matches  <A 187   LYS    >                        ( 16.1 A from   CL    CL B 212  )
         E  <A 124   GLU    > matches  <B 108   GLU    >                        ( 20.9 A from   NA    NA B 214  )
 
KERBm  3*FOUND in 4ky4  size =    3  ^    BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SY     #    2                            
  RMSD =     1.52 A
  TRANSFORM   -0.0076 -0.1447  0.9895 -0.8899 -0.4502 -0.0727 -0.4560  0.8811  0.1253    53.454    -6.613    59.325              
         T  <A  34   THR    > matches  <A  29   THR    >                        (  7.0 A from    OE1 04J A 702  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        (  7.7 A from    OE2 04J A 702  )
         E  <A 124   GLU    > matches  <A 594   GLU    >                        ( 22.5 A from    N7N NDP A 703  )
 
KERBm  3*FOUND in 3tjl  size =    3  ^    NADPH DEHYDROGENASE;                                    #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.5623  0.6485  0.5131 -0.7498  0.6615 -0.0144  0.3487  0.3766 -0.8582    20.190    35.298     6.429              
         T  <A  34   THR    > matches  <A  44   THR    >                        ( 10.9 A from    O3A MLA A 414  )
         K  <A  60   LYS    > matches  <A  89   LYS    >                        ( 11.0 A from    O3A MLA A 414  )
         E  <A 124   GLU    > matches  <A 396   GLU    >                        ( 19.7 A from    C7M FMN A 408  )
 
KERBm  3*FOUND in 2w2g  size =    3  ^    NON-STRUCTURAL PROTEIN 3;                               #    3                            
  RMSD =     1.52 A
  TRANSFORM   -0.1861  0.0082 -0.9825  0.6293 -0.7669 -0.1256  0.7545  0.6417 -0.1376    37.247    17.244     7.125              
         T  <A  34   THR    > matches  <A 502   THR    >                        ( 23.4 A from    O2  SO4 A1653  )
         K  <A  60   LYS    > matches  <A 506   LYS    >                        ( 25.7 A from    O2  SO4 A1653  )
         E  <A 124   GLU    > matches  <A 618   GLU    >                        ( 21.1 A from    O2  SO4 A1653  )
 
KERBm  3*FOUND in 5fgw  size =    3  ^    EXTRACELLULAR STREPTODORNASE D;                         #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.6599  0.4944 -0.5657  0.4937 -0.8529 -0.1695  0.5663  0.1674  0.8070    54.736   -34.099    79.743              
         T  <A  34   THR    > matches  <A 245   THR    >                        (  8.8 A from   CL    CL A 310  )
         K  <A  60   LYS    > matches  <A 243   LYS    >                        ( -3.4 A from   CL    CL A 310s )
         E  <A 124   GLU    > matches  <A 150   GLU    >                        ( 16.9 A from    O   ACT A 312  )
 
KERBm  3*FOUND in 5lmg  size =    3  ^    DNA TOPOISOMERASE 2-ASSOCIATED PROTEIN PAT1;            #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.1199 -0.7951 -0.5944 -0.2556 -0.5538  0.7924  0.9593 -0.2470  0.1368    70.449     1.559     3.547              
         T  <A  34   THR    > matches  <A 740   THR    >                        ( 10.1 A from    C2  EDO A 809  )
         K  <A  60   LYS    > matches  <A 743   LYS    >                        ( 16.8 A from    C2  EDO A 809  )
         E  <A 124   GLU    > matches  <A 685   GLU    >                        (  9.4 A from    C2  EDO A 804  )
 
KERBm  3*FOUND in 4q1k  size =    3  ^    POLYKETIDE BIOSYNTHESIS ENOYL-COA ISOMERASE PKSI;       #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.1804  0.9833  0.0259  0.3936  0.0480  0.9180 -0.9014 -0.1758  0.3957    25.345   -42.650    42.592              
         T  <A  34   THR    > matches  <A  56   THR    >                        ( 21.5 A from    O1  GOL A 301  )
         K  <A  60   LYS    > matches  <A  19   LYS    >                        ( 28.1 A from    O1  GOL A 303  )
         E  <A 124   GLU    > matches  <A 171   GLU    >                        ( 12.4 A from    O1  GOL A 303  )
 
KERBm  3*FOUND in 3p8c  size =    3  ^    CYTOPLASMIC FMR1-INTERACTING PROTEIN 1;                 #    5                            
  RMSD =     1.52 A
  TRANSFORM    0.0698 -0.8756  0.4781  0.9632  0.1838  0.1961  0.2596 -0.4468 -0.8562   -55.480   -57.325    97.345              
         T  <A  34   THR    > matches  <B 247   THR    >                        ( 30.7 A from   CL    CL B1131  )
         K  <A  60   LYS    > matches  <B 514   LYS    >                        ( 35.2 A from    O1  TRS A1254  )
         E  <A 124   GLU    > matches  <B 259   GLU    >                        ( 15.3 A from   CL    CL B1131  )
 
KERBm  3*FOUND in 5syt  size =    3  ^    CAAX PRENYL PROTEASE 1 HOMOLOG;                         #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.2411  0.5194  0.8198  0.3034 -0.7621  0.5720 -0.9219 -0.3866 -0.0261   132.751  -185.573  -185.439              
         T  <A  34   THR    > matches  <A  63   THR    >                        (  9.5 A from    H21 DMS A 522  )
         K  <A  60   LYS    > matches  <A  66   LYS    >                        (  5.7 A from    H21 DMS A 522  )
         E  <A 124   GLU    > matches  <A 327   GLU    >                        ( 16.7 A from    H23 DMS A 521  )
 
KERBm  3*FOUND in 1jg7  size =    3  ^    DNA BETA-GLUCOSYLTRANSFERASE;                           #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.5352  0.6442  0.5465  0.8444 -0.3895 -0.3678  0.0241 -0.6583  0.7524   -16.745    -3.613    34.723              
         T  <A  34   THR    > matches  <A 334   THR    >                        ( 16.4 A from    O3' UDP A 400  )
         K  <A  60   LYS    > matches  <A 337   LYS    >                        ( 20.3 A from    O3' UDP A 400  )
         E  <A 124   GLU    > matches  <A 245   GLU    >                        ( 11.3 A from    O2  UDP A 400  )
 
KERBm  3*FOUND in 2avn  size =    3  ^    UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFERA     #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.2676  0.0076  0.9635 -0.1128 -0.9928  0.0391 -0.9569  0.1191  0.2648    -4.974    20.692    59.466              
         T  <A  34   THR    > matches  <A  53   THR    >                        (  5.9 A from    OXT SAI A1300  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        (  7.4 A from    OXT SAI A1300  )
         E  <A 124   GLU    > matches  <A  94   GLU    >                        ( -3.0 A from    N6  SAI A1300s )
 
KERBm  3*FOUND in 2ocg  size =    3  ^    VALACYCLOVIR HYDROLASE;                                 #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.4781 -0.1630 -0.8631  0.4315  0.8123 -0.3924 -0.7650  0.5600  0.3180    44.993    79.046    83.458              
         T  <A  34   THR    > matches  <A 152   THR    >                        ( 11.2 A from   MG    MG A 402  )
         K  <A  60   LYS    > matches  <A 200   LYS    >                        ( 10.1 A from   MG    MG A 402  )
         E  <A 124   GLU    > matches  <A 225   GLU    >                        ( 17.5 A from    O2  GOL A 501  )
 
KERBm  3*FOUND in 2i2x  size =    3  ^    METHYLTRANSFERASE 1;                                    #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.8981 -0.2650  0.3510 -0.4394  0.5724 -0.6923  0.0175  0.7760  0.6305    72.743    -9.621  -108.543              
         T  <A  34   THR    > matches  <A 201   THR    >                        ( 21.8 A from    N40 B13 B 500  )
         K  <A  60   LYS    > matches  <A 205   LYS    >                        ( 24.2 A from    N40 B13 B 500  )
         E  <A 124   GLU    > matches  <A 170   GLU    >                        ( 11.3 A from    C47 B13 B 500  )
 
KERBm  3*FOUND in 4zla  size =    3  ^    CYTOSOL AMINOPEPTIDASE;                                 #    3                            
  RMSD =     1.52 A
  TRANSFORM    0.0117 -0.9860 -0.1664  0.6336 -0.1214  0.7640  0.7735  0.1144 -0.6233    14.317   -10.480   -52.308              
         T  <A  34   THR    > matches  <A  95   THR    >                        ( 33.9 A from   NA    NA A 503  )
         K  <A  60   LYS    > matches  <A 146   LYS    >                        ( 36.0 A from   NA    NA A 503  )
         E  <A 124   GLU    > matches  <A 491   GLU    >                        ( 27.9 A from   NA    NA A 503  )
 
KERBm  3*FOUND in 4wri  size =    3  ^    OKADAIC ACID BINDING PROTEIN 2-ALPHA;                   #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.7366 -0.2468 -0.6296 -0.6690  0.1294  0.7319  0.0992 -0.9604  0.2605   100.036   -36.787    49.863              
         T  <A  34   THR    > matches  <A 163   THR    >                        (  4.1 A from    C39 OKA A 201  )
         K  <A  60   LYS    > matches  <A 166+  LYS    >                        (  2.9 A from    O   MLY A 165  )
         E  <A 124   GLU    > matches  <A 118   GLU    >                        (  4.8 A from    CD  MLY A 120  )
 
KERBm  3*FOUND in 5w6y  size =    3  ^    CHORISMATE MUTASE;                                      #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.2502 -0.8632  0.4386  0.9581  0.1555 -0.2406 -0.1395 -0.4804 -0.8659    64.007   -27.999    20.102              
         T  <A  34   THR    > matches  <A 128   THR    >                        ( 16.5 A from    CH2 TRP A 401  )
         K  <A  60   LYS    > matches  <A 132   LYS    >                        ( 18.1 A from    CH2 TRP A 401  )
         E  <A 124   GLU    > matches  <A 106   GLU    >                        ( 20.1 A from    CZ3 TRP A 401  )
 
KERBm  3*FOUND in 3qfi  size =    3  ^    TRANSCRIPTIONAL REGULATOR;                              #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.3989 -0.8832 -0.2467 -0.7018 -0.4672  0.5377  0.5901  0.0413  0.8062    29.509    -7.284    28.172              
         T  <A  34   THR    > matches  <A  98   THR    > 
         K  <A  60   LYS    > matches  <A  96   LYS    > 
         E  <A 124   GLU    > matches  <A 204   GLU    > 
 
KERBm  3*FOUND in 4nyh  size =    3  ^    RNA/RNP COMPLEX-1-INTERACTING PHOSPHATASE;              #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.6358  0.7603 -0.1330  0.5978  0.3761 -0.7079  0.4882  0.5296  0.6937    44.729   -36.799    24.785              
         T  <A  34   THR    > matches  <A  94   THR    >                        ( -4.3 A from   CL    CL A 302s )
         K  <A  60   LYS    > matches  <A 113   LYS    >                        (  7.3 A from   CL    CL A 302  )
         E  <A 124   GLU    > matches  <A  69   GLU    >                        ( 18.0 A from    O4  PO4 A 301  )
 
KERBm  3*FOUND in 3d0g  size =    3  ^    ANGIOTENSIN-CONVERTING ENZYME 2;                        #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.3162  0.8535  0.4142  0.3995 -0.5158  0.7579 -0.8605  0.0742  0.5040   -52.147   -95.513    13.945              
         T  <A  34   THR    > matches  <A 414   THR    >                        ( 19.0 A from   ZN    ZN A 901  )
         K  <A  60   LYS    > matches  <A 416   LYS    >                        ( 23.4 A from   ZN    ZN A 901  )
         E  <A 124   GLU    > matches  <A 402   GLU    >                        ( -2.4 A from   ZN    ZN A 901s )
 
KERBm  3*FOUND in 1t2w  size =    3  ^    SORTASE;                                                #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.3350 -0.3909 -0.8573 -0.5653  0.8113 -0.1491 -0.7538 -0.4347  0.4927     2.873    -1.949   -14.809              
         T  <A  34   THR    > matches  <A 156   THR    >                        ( 12.3 A from    CB  PRO A 332  )
         K  <A  60   LYS    > matches  <A 138   LYS    >                        ( 19.1 A from    CB  PRO A 332  )
         E  <A 124   GLU    > matches  <A 105   GLU    >                        ( -3.2 A from    OE2 GLU A 333s )
 
KERBm  3*FOUND in 1quu  size =    3  ^    HUMAN SKELETAL MUSCLE ALPHA-ACTININ 2;                  #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.6373  0.4309 -0.6388 -0.7208 -0.0402  0.6920 -0.2725 -0.9015 -0.3363   113.564   -51.346    69.476              
         T  <A  34   THR    > matches  <A 126   THR    > 
         K  <A  60   LYS    > matches  <A 122   LYS    > 
         E  <A 124   GLU    > matches  <A 184   GLU    > 
 
KERBm  3*FOUND in 4cyi  size =    3  ^    PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT     #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.1903 -0.9665 -0.1722 -0.7775 -0.0413 -0.6275 -0.5994 -0.2533  0.7593    89.300    88.437    28.244              
         T  <A  34   THR    > matches  <A 235   THR    >                        (  8.3 A from    H2  ATP A 900  )
         K  <A  60   LYS    > matches  <A 275   LYS    >                        (  9.4 A from    H2  ATP A 900  )
         E  <A 124   GLU    > matches  <A 522   GLU    >                        ( 23.8 A from    H2  ATP A 900  )
 
KERBm  3*FOUND in 5e3x  size =    3  ^    THERMOSTABLE CARBOXYPEPTIDASE 1;                        #    2                            
  RMSD =     1.52 A
  TRANSFORM    0.1803 -0.0029  0.9836 -0.9314  0.3210  0.1717  0.3162  0.9471 -0.0552    -7.037     6.135    17.547              
         T  <A  34   THR    > matches  <A 464   THR    >                        ( 20.0 A from   CO    CO A 501  )
         K  <A  60   LYS    > matches  <A 466   LYS    >                        ( 23.0 A from   CO    CO A 501  )
         E  <A 124   GLU    > matches  <A 437   GLU    >                        ( 21.6 A from   CO    CO A 501  )
 
KERBm  3*FOUND in 5hux  size =    3  ^    PROBABLE SUGAR KINASE;                                  #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.2247 -0.5356 -0.8140 -0.4186 -0.8074  0.4158  0.8800 -0.2473  0.4056    42.496    11.133   -10.122              
         T  <A  34   THR    > matches  <A 366   THR    >                        ( 26.5 A from    O2A ADP A 501  )
         K  <A  60   LYS    > matches  <A 369   LYS    >                        ( 26.9 A from    O2A ADP A 501  )
         E  <A 124   GLU    > matches  <A 171   GLU    >                        ( 31.7 A from    O2B ADP A 501  )
 
KERBm  3*FOUND in 4jis  size =    3  ^    RIBITOL-5-PHOSPHATE CYTIDYLYLTRANSFERASE;               #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.4557  0.6571  0.6005 -0.8875 -0.2839 -0.3629  0.0680  0.6983 -0.7126     6.470   -12.804    18.131              
         T  <A  34   THR    > matches  <A 193   THR    > 
         K  <A  60   LYS    > matches  <A 197   LYS    > 
         E  <A 124   GLU    > matches  <A  56   GLU    > 
 
KERBm  3*FOUND in 4fm3  size =    3  ^    UNCHARACTERIZED HYPOTHETICAL PROTEIN;                   #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.4346 -0.2970 -0.8503 -0.4318 -0.7598  0.4861  0.7904 -0.5784 -0.2019    72.158   -22.724     5.930              
         T  <A  34   THR    > matches  <A  94   THR    >                        ( 11.3 A from    C8  PG4 A 202  )
         K  <A  60   LYS    > matches  <A  98   LYS    >                        ( 12.0 A from    O5  PG4 A 202  )
         E  <A 124   GLU    > matches  <A  82   GLU    >                        ( 18.5 A from    O1  PG4 A 202  )
 
KERBm  3*FOUND in 5jj6  size =    3  ^    ADENOSINE MONOPHOSPHATE-PROTEIN TRANSFERASE FICD HO     #    1                            
  RMSD =     1.52 A
  TRANSFORM    0.2538 -0.3100 -0.9162 -0.7499 -0.6613  0.0160  0.6109 -0.6830  0.4004   -34.325   -42.457   -23.942              
         T  <A  34   THR    > matches  <A 277   THR    >                        ( 15.7 A from    O4  SO4 A 601  )
         K  <A  60   LYS    > matches  <A 296   LYS    >                        ( 19.2 A from    O4  SO4 A 601  )
         E  <A 124   GLU    > matches  <A 439   GLU    >                        ( 18.8 A from    O3  SO4 A 601  )
 
KERBm  3*FOUND in 5f7c  size =    3  ^    ALPHA-GLUCOSIDASE;                                      #    1                            
  RMSD =     1.52 A
  TRANSFORM   -0.6233 -0.3297  0.7091 -0.5721  0.8104 -0.1261  0.5331  0.4842  0.6938   -83.607    39.796  -142.709              
         T  <A  34   THR    > matches  <A 150   THR    > 
         K  <A  60   LYS    > matches  <A  27   LYS    > 
         E  <A 124   GLU    > matches  <A 162   GLU    > 
 
KERBm  3*FOUND in 2yic  size =    3  ^    2-OXOGLUTARATE DECARBOXYLASE;                           #    3                            
  RMSD =     1.52 A
  TRANSFORM   -0.3130  0.9319 -0.1833 -0.9320 -0.3385 -0.1299  0.1831 -0.1302 -0.9744    47.476     9.647    13.017              
         T  <A  34   THR    > matches  <A1110   THR    >                        ( 41.1 A from   CA    CA A2003  )
         K  <A  60   LYS    > matches  <A1162   LYS    >                        ( 43.3 A from   CA    CA A2003  )
         E  <A 124   GLU    > matches  <A1103   GLU    >                        ( 41.5 A from   CA    CA A2003  )
 
KERBm  3*FOUND in 2qtf  size =    3  ^    GTP-BINDING PROTEIN;                                    #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.6108  0.6873 -0.3932 -0.3023  0.6614  0.6864 -0.7318  0.3003 -0.6117   -33.838   -40.725    47.172              
         T  <A  34   THR    > matches  <A 188   THR    >                        ( -3.4 A from    OXT ACT A 601s )
         K  <A  60   LYS    > matches  <A 192   LYS    >                        (  2.8 A from    O3  SO4 A 501s )
         E  <A 124   GLU    > matches  <A  64   GLU    >                        ( 18.7 A from    CH3 ACT A 601  )
 
KERBm  3*FOUND in 4ky4  size =    3  ^    BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SY     #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.4863 -0.3517  0.7999 -0.8514  0.0151  0.5243  0.1965  0.9360  0.2921    30.262    21.892    49.066              
         T  <A  34   THR    > matches  <A  30   THR    >                        (  9.7 A from    OE2 04J A 702  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        (  7.7 A from    OE2 04J A 702  )
         E  <A 124   GLU    > matches  <A 324   GLU    >                        ( 14.8 A from    C6' 1UE A 704  )
 
KERBm  3*FOUND in 4hsu  size =    3  ^    LYSINE-SPECIFIC HISTONE DEMETHYLASE 1B;                 #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.0767 -0.7898 -0.6085 -0.4468 -0.5184  0.7291  0.8913 -0.3279  0.3131    39.709   -44.394    35.625              
         T  <A  34   THR    > matches  <A 112   THR    >                        ( 21.1 A from   ZN    ZN A 903  )
         K  <A  60   LYS    > matches  <A 115   LYS    >                        ( 25.8 A from   ZN    ZN A 903  )
         E  <A 124   GLU    > matches  <A  71   GLU    >                        ( 10.2 A from   ZN    ZN A 903  )
 
KERBm  3*FOUND in 3iwt  size =    3  ^    178AA LONG HYPOTHETICAL MOLYBDENUM COFACTOR BIOSYNT     #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.2345 -0.7993 -0.5533  0.2866  0.6007 -0.7463 -0.9289 -0.0165 -0.3700    72.136   -63.609    23.318              
         T  <A  34   THR    > matches  <A 102   THR    >                        (  7.5 A from    O1  PEG A 180  )
         K  <A  60   LYS    > matches  <A 105   LYS    >                        (  7.9 A from    O1  PEG A 180  )
         E  <A 124   GLU    > matches  <A  29   GLU    >                        ( 14.4 A from    O4  PEG A 180  )
 
KERBm  3*FOUND in 4p6z  size =    3  ^    AP-1 COMPLEX SUBUNIT GAMMA-1;                           #    5                            
  RMSD =     1.53 A
  TRANSFORM   -0.7711  0.1468 -0.6196 -0.2197 -0.9746  0.0425  0.5977 -0.1689 -0.7837    16.972   -77.629    74.885              
         T  <A  34   THR    > matches  <M 422   THR    > 
         K  <A  60   LYS    > matches  <M 373   LYS    > 
         E  <A 124   GLU    > matches  <M 353   GLU    > 
 
KERBm  3*FOUND in 5bsr  size =    3  ^    4-COUMARATE--COA LIGASE 2;                              #    3                            
  RMSD =     1.53 A
  TRANSFORM   -0.4191  0.6859  0.5949  0.7335 -0.1304  0.6671 -0.5351 -0.7159  0.4485    15.493   -88.908    62.872              
         T  <A  34   THR    > matches  <A 112   THR    >                        (  9.2 A from    C2A COA A 601  )
         K  <A  60   LYS    > matches  <A 137   LYS    >                        (  6.3 A from    N1A COA A 601  )
         E  <A 124   GLU    > matches  <A 495   GLU    >                        ( 21.4 A from    O2B COA A 601  )
 
KERBm  3*FOUND in 1cy9  size =    3  ^    DNA TOPOISOMERASE I;                                    #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.3854  0.0247 -0.9224  0.4109  0.8905  0.1955 -0.8263  0.4543 -0.3330    45.325    -6.284    19.320              
         T  <A  34   THR    > matches  <A 304   THR    > 
         K  <A  60   LYS    > matches  <A 302   LYS    > 
         E  <A 124   GLU    > matches  <A 378   GLU    > 
 
KERBm  3*FOUND in 3qdk  size =    3  ^    RIBULOKINASE;                                           #    2                            
  RMSD =     1.53 A
  TRANSFORM   -0.5917 -0.1876  0.7840 -0.8052  0.0912 -0.5859 -0.0384  0.9780  0.2051    34.117    61.059   -13.348              
         T  <A  34   THR    > matches  <A 286   THR    >                        ( 21.3 A from    O1  QDK A 573  )
         K  <A  60   LYS    > matches  <A 289   LYS    >                        ( 21.1 A from    O1  QDK A 573  )
         E  <A 124   GLU    > matches  <A 247   GLU    >                        ( 22.3 A from    O2  QDK A 573  )
 
KERBm  3*FOUND in 5yjw  size =    3  ^    ROTENONE-INSENSITIVE NADH-UBIQUINONE OXIDOREDUCTASE     #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.6689  0.3424 -0.6597 -0.1376  0.8152  0.5627 -0.7305 -0.4672  0.4982    27.523    36.803   -10.986              
         T  <A  34   THR    > matches  <A 348   THR    >                        (  7.8 A from    O1  PEG A 615  )
         K  <A  60   LYS    > matches  <A 352   LYS    >                        ( 11.6 A from    O1  PEG A 615  )
         E  <A 124   GLU    > matches  <A 197   GLU    >                        ( -4.1 A from    O3  GOL A 622s )
 
KERBm  3*FOUND in 5kay  size =    3  ^    SPELTER;                                                #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.3948  0.9113 -0.1168 -0.6798  0.3753  0.6301 -0.6180  0.1694 -0.7677    15.949    -3.065    58.994              
         T  <A  34   THR    > matches  <A  40   THR    >                        ( 21.8 A from   NA    NA A 302  )
         K  <A  60   LYS    > matches  <A  44   LYS    >                        ( 26.4 A from   NA    NA A 302  )
         E  <A 124   GLU    > matches  <A  28   GLU    >                        ( 12.5 A from   ZN    ZN A 301  )
 
KERBm  3*FOUND in 2jkb  size =    3  ^    SIALIDASE B;                                            #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.4093 -0.8064 -0.4270  0.9063 -0.3053 -0.2921 -0.1052  0.5065 -0.8558   -12.848   -19.459   -23.838              
         T  <A  34   THR    > matches  <A 454   THR    >                        ( 10.4 A from    C2  EDO A1700  )
         K  <A  60   LYS    > matches  <A 372   LYS    >                        ( 12.1 A from    C2  EDO A1700  )
         E  <A 124   GLU    > matches  <A 433   GLU    >                        ( 17.2 A from    O10 SKD A1698  )
 
KERBm  3*FOUND in 5gi7  size =    3  ^    DOPAMINE N-ACETYLTRANSFERASE;                           #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.4525 -0.4044  0.7948 -0.3844 -0.8927 -0.2354 -0.8047  0.1989  0.5594    26.726    87.538    36.340              
         T  <A  34   THR    > matches  <A  41   THR    >                        (-11.5 A from    O9P COA A 301s )
         K  <A  60   LYS    > matches  <A  45   LYS    >                        ( 13.3 A from    C7P COA A 301  )
         E  <A 124   GLU    > matches  <A  25   GLU    >                        ( 16.8 A from    O4A COA A 301  )
 
KERBm  3*FOUND in 4kw5  size =    3  ^    OXIDOREDUCTASE;                                         #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.1086 -0.9648  0.2395  0.8754 -0.0214 -0.4830 -0.4711 -0.2621 -0.8422   -29.445   -11.045    54.270              
         T  <A  34   THR    > matches  <A 288   THR    >                        ( 20.0 A from    O3  GOL A 503  )
         K  <A  60   LYS    > matches  <A 284+  LYS    >                        ( 20.5 A from    O3  GOL A 503  )
         E  <A 124   GLU    > matches  <A 211   GLU    >                        ( 20.3 A from    O22 1W6 A 502  )
 
KERBm  3*FOUND in 5iz3  size =    3  ^    SEDOHEPTULOSE-1,7-BISPHOSPHATASE;                       #    2                            
  RMSD =     1.53 A
  TRANSFORM   -0.5840  0.7437  0.3254 -0.4572  0.0299 -0.8888  0.6707  0.6679 -0.3226    67.974   -19.145    61.672              
         T  <A  34   THR    > matches  <A 378   THR    >                        ( 14.1 A from    N1  IMD A 401  )
         K  <A  60   LYS    > matches  <A 278   LYS    >                        ( 17.3 A from    N1  IMD A 401  )
         E  <A 124   GLU    > matches  <A 337   GLU    >                        (  5.9 A from    N3  IMD A 401  )
 
KERBm  3*FOUND in 3we9  size =    3  ^    PUTATIVE PHYTOENE/SQUALENE SYNTHASE YISP;               #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.5039  0.7876 -0.3546 -0.3865  0.5728  0.7228 -0.7724  0.2272 -0.5931   -29.692   -35.960    27.716              
         T  <A  34   THR    > matches  <A 202   THR    >                        ( 25.4 A from    C5  PGE A 900  )
         K  <A  60   LYS    > matches  <A 199   LYS    >                        ( 28.8 A from    C5  PGE A 900  )
         E  <A 124   GLU    > matches  <A 266   GLU    >                        ( 18.0 A from    O1  PGE A 900  )
 
KERBm  3*FOUND in 4uwm  size =    3  ^    3,6-DIKETOCAMPHANE 1,6 MONOOXYGENASE;                   #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.2291  0.9057  0.3567 -0.9560  0.2783 -0.0927  0.1832  0.3198 -0.9296    20.310   -33.705    64.267              
         T  <A  34   THR    > matches  <A  90   THR    >                        ( 12.0 A from    O1  PEG A 403  )
         K  <A  60   LYS    > matches  <A  87   LYS    >                        ( 17.5 A from    O1  PEG A 403  )
         E  <A 124   GLU    > matches  <A 181   GLU    >                        ( 14.2 A from    C1  PEG A 403  )
 
KERBm  3*FOUND in 3cq0  size =    3  ^    PUTATIVE TRANSALDOLASE YGR043C;                         #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.5790 -0.1302 -0.8049  0.3591  0.8455 -0.3951 -0.7320  0.5178  0.4428    18.298     1.005    25.667              
         T  <A  34   THR    > matches  <A  95   THR    >                        ( 10.7 A from    O2  EDO A 345  )
         K  <A  60   LYS    > matches  <A  99   LYS    >                        ( -9.9 A from    O2  EDO A 345s )
         E  <A 124   GLU    > matches  <A  83   GLU    >                        ( -3.5 A from    C3  GOL A 352s )
 
KERBm  3*FOUND in 4xe7  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.5531  0.8207  0.1431  0.6991  0.3639  0.6154 -0.4530 -0.4404  0.7751    44.325    28.951    14.083              
         T  <A  34   THR    > matches  <A 176   THR    > 
         K  <A  60   LYS    > matches  <A 188   LYS    > 
         E  <A 124   GLU    > matches  <A 169   GLU    > 
 
KERBm  3*FOUND in 2aka  size =    3  ^    MYOSIN II HEAVY CHAIN;                                  #    3                            
  RMSD =     1.53 A
  TRANSFORM    0.5152  0.3072  0.8001 -0.3190  0.9352 -0.1537  0.7955  0.1760 -0.5798   -37.463   -21.652    12.878              
         T  <A  34   THR    > matches  <A 513   THR    > 
         K  <A  60   LYS    > matches  <A 557   LYS    > 
         E  <A 124   GLU    > matches  <A 636   GLU    > 
 
KERBm  3*FOUND in 3e0i  size =    3  ^    2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE;              #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.1442 -0.9886 -0.0433 -0.6474 -0.1274  0.7514  0.7484  0.0803  0.6584    67.592    -7.269   -14.634              
         T  <A  34   THR    > matches  <A1152   THR    >                        (  7.0 A from    O3P PEP A3268  )
         K  <A  60   LYS    > matches  <A1124   LYS    >                        ( -2.8 A from    O2  PEP A3268s )
         E  <A 124   GLU    > matches  <A1035   GLU    >                        ( 24.5 A from    O2' PEP A3268  )
 
KERBm  3*FOUND in 3u1w  size =    3  ^    HYPOTHETICAL PERIPLASMIC PROTEIN;                       #    2                            
  RMSD =     1.53 A
  TRANSFORM    0.1413 -0.9036  0.4044  0.6415 -0.2276 -0.7326 -0.7540 -0.3629 -0.5475    21.849    10.538    53.953              
         T  <A  34   THR    > matches  <A  99   THR    >                        ( 12.8 A from   CL    CL A 284  )
         K  <A  60   LYS    > matches  <A 102   LYS    >                        ( 15.0 A from   CL    CL A 284  )
         E  <A 124   GLU    > matches  <A 222   GLU    >                        ( 12.9 A from   CL    CL A 291  )
 
KERBm  3*FOUND in 5urj  size =    3  ^    U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASE     #    4                            
  RMSD =     1.53 A
  TRANSFORM    0.3482 -0.6260 -0.6978  0.7167  0.6576 -0.2322 -0.6042  0.4193 -0.6776   160.017    62.159    89.549              
         T  <A  34   THR    > matches  <A 570   THR    >                        ( 36.2 A from    C1  8LS A2202  )
         K  <A  60   LYS    > matches  <A 592   LYS    >                        ( 29.8 A from    C1  8LS A2202  )
         E  <A 124   GLU    > matches  <A 798   GLU    >                        ( 52.8 A from    C1  8LS A2202  )
 
KERBm  3*FOUND in 2veo  size =    3  ^    LIPASE A;                                               #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.3660  0.0825 -0.9270  0.6643 -0.6744 -0.3223  0.6517  0.7338 -0.1920    75.092   -14.221   -25.276              
         T  <A  34   THR    > matches  <A  62   THR    >                        ( 22.2 A from    C7  PG4 A1443  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        ( 25.5 A from    C6  PG4 A1443  )
         E  <A 124   GLU    > matches  <A 249   GLU    >                        ( 12.1 A from    O5  PG4 A1443  )
 
KERBm  3*FOUND in 1xdp  size =    3  ^    POLYPHOSPHATE KINASE;                                   #    2                            
  RMSD =     1.53 A
  TRANSFORM    0.0535 -0.9252  0.3758  0.3915 -0.3267 -0.8602 -0.9186 -0.1931 -0.3447   -52.305    -7.234    -1.723              
         T  <A  34   THR    > matches  <A 228   THR    >                        ( 15.9 A from    O4' ATP A 701  )
         K  <A  60   LYS    > matches  <A  51   LYS    >                        ( 10.9 A from    O2' ATP A 701  )
         E  <A 124   GLU    > matches  <A 274   GLU    >                        ( 35.2 A from    O4' ATP A 701  )
 
KERBm  3*FOUND in 2iw3  size =    3  ^    ELONGATION FACTOR 3A;                                   #    6                            
  RMSD =     1.53 A
  TRANSFORM   -0.7750  0.2303  0.5886  0.5357  0.7335  0.4183  0.3354 -0.6394  0.6918   174.415   -97.049  -246.779              
         T  <A  34   THR    > matches  <A 448   THR    >                        (  5.9 A from    O1  SO4 A1975  )
         K  <A  60   LYS    > matches  <A 616   LYS    >                        ( -2.2 A from    O3  SO4 A1975s )
         E  <A 124   GLU    > matches  <A 488   GLU    >                        ( 23.4 A from    O1  SO4 A1975  )
 
KERBm  3*FOUND in 3lgd  size =    3  ^    ADENOSINE DEAMINASE CECR1;                              #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.4188 -0.4922  0.7631 -0.3338  0.8650  0.3747  0.8445  0.0978  0.5266    43.744    -2.590    38.140              
         T  <A  34   THR    > matches  <A  94   THR    >                        ( 12.9 A from    O6  NAG A 550  )
         K  <A  60   LYS    > matches  <A 423   LYS    >                        ( 15.8 A from    O6  NAG A 550  )
         E  <A 124   GLU    > matches  <A 151   GLU    >                        (  7.7 A from    O3  NAG A 650  )
 
KERBm  3*FOUND in 3u7q  size =    3  ^    NITROGENASE MOLYBDENUM-IRON PROTEIN ALPHA CHAIN;        #    4                            
  RMSD =     1.53 A
  TRANSFORM   -0.8876 -0.0035  0.4607 -0.2654 -0.8135 -0.5175 -0.3765  0.5816 -0.7211    21.345    22.020    32.076              
         T  <A  34   THR    > matches  <B 436   THR    >                        ( 22.0 A from   MG    MG B 526  )
         K  <A  60   LYS    > matches  <B  50   LYS    >                        ( 27.3 A from   MG    MG B 526  )
         E  <A 124   GLU    > matches  <B 508   GLU    >                        (  6.8 A from   MG    MG B 526  )
 
KERBm  3*FOUND in 4uul  size =    3  ^    L-LACTATE DEHYDROGENASE;                                #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.9818 -0.1734  0.0777 -0.1755  0.6705 -0.7208 -0.0729  0.7213  0.6887    56.258    28.090    12.937              
         T  <A  34   THR    > matches  <A 195   THR    > 
         K  <A  60   LYS    > matches  <A 207   LYS    > 
         E  <A 124   GLU    > matches  <A 317   GLU    > 
 
KERBm  3*FOUND in 3mdj  size =    3  ^    ENDOPLASMIC RETICULUM AMINOPEPTIDASE 1;                 #    2                            
  RMSD =     1.53 A
  TRANSFORM   -0.6117 -0.4393 -0.6579 -0.0939  0.8661 -0.4911 -0.7855  0.2386  0.5711    15.667   -34.820    13.872              
         T  <A  34   THR    > matches  <A 808   THR    >                        ( 26.5 A from    O6  NAG A6001  )
         K  <A  60   LYS    > matches  <A 813   LYS    >                        ( 26.8 A from    O6  NAG A6001  )
         E  <A 124   GLU    > matches  <A 730   GLU    >                        ( 23.3 A from    C15 BES A1001  )
 
KERBm  3*FOUND in 3to3  size =    3  ^    PETROBACTIN BIOSYNTHESIS PROTEIN ASBB;                  #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.0980 -0.2980 -0.9495  0.9952  0.0318  0.0927 -0.0026  0.9540 -0.2997    25.258   -29.106    31.340              
         T  <A  34   THR    > matches  <A 309   THR    >                        ( 21.8 A from   CL    CL A 617  )
         K  <A  60   LYS    > matches  <A 311   LYS    >                        ( 24.2 A from    O2  EDO A 618  )
         E  <A 124   GLU    > matches  <A 181   GLU    >                        ( 11.9 A from   CL    CL A 617  )
 
KERBm  3*FOUND in 3u4q  size =    3  ^    ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A;              #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.8805  0.1873 -0.4354 -0.3310  0.4146  0.8477 -0.3393 -0.8905  0.3031    66.594     0.128    49.831              
         T  <A  34   THR    > matches  <A  12   THR    >                        ( 55.0 A from    O1  SO4 B1167  )
         K  <A  60   LYS    > matches  <A 476   LYS    >                        ( 58.2 A from    O1  SO4 B1167  )
         E  <A 124   GLU    > matches  <A  84   GLU    >                        ( 38.3 A from    O1  SO4 B1167  )
 
KERBm  3*FOUND in 4ddu  size =    3  ^    REVERSE GYRASE;                                         #    2                            
  RMSD =     1.53 A
  TRANSFORM    0.6935  0.6784  0.2425 -0.1488 -0.1945  0.9696 -0.7049  0.7085  0.0340   -10.337   -16.896    66.344              
         T  <A  34   THR    > matches  <A 289   THR    >                        ( 46.1 A from   ZN    ZN A1203  )
         K  <A  60   LYS    > matches  <A 482   LYS    >                        ( 43.8 A from   ZN    ZN A1203  )
         E  <A 124   GLU    > matches  <A 492   GLU    >                        ( 57.6 A from   ZN    ZN A1203  )
 
KERBm  3*FOUND in 3urz  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.3946 -0.1673  0.9035 -0.6140  0.7795 -0.1238  0.6836  0.6036  0.4103  -116.972    -0.814   -29.262              
         T  <A  34   THR    > matches  <A 214   THR    >                        ( 19.3 A from   ZN    ZN A 250  )
         K  <A  60   LYS    > matches  <A 217   LYS    >                        ( 22.4 A from   ZN    ZN A 250  )
         E  <A 124   GLU    > matches  <A 111   GLU    >                        ( -3.2 A from   ZN    ZN A 250s )
 
KERBm  3*FOUND in 3r4z  size =    3  ^    GLYCOSYL HYDROLASE FAMILY 32, N TERMINAL;               #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.9198  0.3689  0.1336 -0.1594 -0.6626  0.7319 -0.3586 -0.6519 -0.6682    33.408   -10.485    59.747              
         T  <A  34   THR    > matches  <A 225   THR    >                        ( 11.4 A from    O4  GLA A 375  )
         K  <A  60   LYS    > matches  <A 197   LYS    >                        ( 14.8 A from    O4  GLA A 375  )
         E  <A 124   GLU    > matches  <A 309   GLU    >                        (  6.3 A from    O2  GLA A 375  )
 
KERBm  3*FOUND in 1v9f  size =    3  ^    RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D;       #    2                            
  RMSD =     1.53 A
  TRANSFORM    0.4697  0.8269 -0.3094  0.6869 -0.1221  0.7164 -0.5546  0.5490  0.6253    10.819   -54.977   -11.612              
         T  <A  34   THR    > matches  <A 143   THR    >                        ( 12.0 A from    O4  PO4 A 400  )
         K  <A  60   LYS    > matches  <A  98   LYS    >                        (  7.3 A from    O4  PO4 A 400  )
         E  <A 124   GLU    > matches  <A 216   GLU    >                        ( 26.1 A from    O3  PO4 A 400  )
 
KERBm  3*FOUND in 2iub  size =    3  ^    DIVALENT CATION TRANSPORT-RELATED PROTEIN;              #    2                            
  RMSD =     1.53 A
  TRANSFORM   -0.3531 -0.0171  0.9354 -0.9350  0.0405 -0.3522  0.0318  0.9990  0.0303     4.350     7.734    48.590              
         T  <A  34   THR    > matches  <A  20   THR    >                        ( 32.3 A from   MG    MG A1352  )
         K  <A  60   LYS    > matches  <A   9   LYS    >                        ( 35.3 A from   MG    MG A1352  )
         E  <A 124   GLU    > matches  <A 121   GLU    >                        ( 29.0 A from   MG    MG A1352  )
 
KERBm  3*FOUND in 3c5p  size =    3  ^    PROTEIN BAS0735 OF UNKNOWN FUNCTION;                    #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.3811  0.7300  0.5673  0.0365 -0.6251  0.7797 -0.9238  0.2765  0.2649   -36.289    -7.233    37.802              
         T  <A  34   THR    > matches  <A  74   THR    >                        ( 21.8 A from   MG    MG A 301  )
         K  <A  60   LYS    > matches  <A  86   LYS    >                        ( 26.3 A from   MG    MG A 301  )
         E  <A 124   GLU    > matches  <A 154   GLU    >                        ( 19.2 A from   MG    MG A 301  )
 
KERBm  3*FOUND in 5wcm  size =    3  ^    BLR6230 PROTEIN;                                        #    2                            
  RMSD =     1.53 A
  TRANSFORM   -0.8941 -0.2333 -0.3823  0.1751 -0.9678  0.1811  0.4122 -0.0950 -0.9061    89.388     8.271    45.260              
         T  <A  34   THR    > matches  <A  77   THR    >                        (  6.0 A from   ZN    ZN A 304  )
         K  <A  60   LYS    > matches  <A  81   LYS    >                        ( -2.0 A from   ZN    ZN A 304s )
         E  <A 124   GLU    > matches  <A 143   GLU    >                        ( 13.3 A from    O12A4NZ A 307  )
 
KERBm  3*FOUND in 3o0z  size =    3  ^    RHO-ASSOCIATED PROTEIN KINASE 1;                        #    1                            
  RMSD =     1.53 A
  TRANSFORM   -0.2595  0.3455 -0.9018 -0.8610  0.3401  0.3781 -0.4374 -0.8746 -0.2092   258.957   -68.491   186.072              
         T  <A  34   THR    > matches  <A 569   THR    > 
         K  <A  60   LYS    > matches  <A 573   LYS    > 
         E  <A 124   GLU    > matches  <A 557   GLU    > 
 
KERBm  3*FOUND in 5oqr  size =    3  ^    CONDENSIN COMPLEX SUBUNIT 3;                            #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.3412 -0.3308 -0.8799  0.3684  0.9082 -0.1986 -0.8648  0.2563 -0.4318   122.524   -33.685    81.130              
         T  <A  34   THR    > matches  <A 340   THR    > 
         K  <A  60   LYS    > matches  <A 383   LYS    > 
         E  <A 124   GLU    > matches  <A 358   GLU    > 
 
KERBm  3*FOUND in 4z38  size =    3  ^    MLNA;                                                   #    1                            
  RMSD =     1.53 A
  TRANSFORM    0.3518  0.9354  0.0358  0.6669 -0.2237 -0.7108  0.6568 -0.2739  0.7025    48.707    25.037     8.957              
         T  <A  34   THR    > matches  <A 598   THR    >                        ( 10.3 A from   HM82 FMN A 900  )
         K  <A  60   LYS    > matches  <A 623   LYS    >                        ( 16.7 A from   HM82 FMN A 900  )
         E  <A 124   GLU    > matches  <A 584   GLU    >                        ( 14.7 A from   HM73 FMN A 900  )
 
KERBm  3*FOUND in 3olc  size =    3  ^    DNA TOPOISOMERASE 2-BINDING PROTEIN 1;                  #    3                            
  RMSD =     1.53 A
  TRANSFORM   -0.7289 -0.1773  0.6612  0.6510 -0.4781  0.5895 -0.2116 -0.8602 -0.4640    15.030   -72.595   123.148              
         T  <A  34   THR    > matches  <X 174   THR    > 
         K  <A  60   LYS    > matches  <X 178   LYS    > 
         E  <A 124   GLU    > matches  <X 150   GLU    > 
 
KERBm  3*FOUND in 3x1l  size =    3  ^    CRISPR SYSTEM CMR SUBUNIT CMR2;                         #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.1345  0.3727  0.9182  0.9898 -0.0946 -0.1066 -0.0471 -0.9231  0.3816   -18.529  -104.261    22.077              
         T  <A  34   THR    > matches  <C  40   THR    >                        ( 24.0 A from   MG    MG B 401  )
         K  <A  60   LYS    > matches  <C 252   LYS    >                        ( 29.3 A from   MG    MG B 401  )
         E  <A 124   GLU    > matches  <B 207   GLU    >                        ( 27.1 A from   MG    MG B 401  )
 
KERBm  3*FOUND in 4yap  size =    3  ^    GLUTATHIONE S-TRANSFERASE HOMOLOG;                      #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.6320 -0.6516 -0.4196 -0.5817 -0.0410 -0.8124 -0.5121 -0.7575  0.4049    46.872    -3.545    54.385              
         T  <A  34   THR    > matches  <A 218   THR    >                        ( 17.0 A from    O1  SO4 A 301  )
         K  <A  60   LYS    > matches  <A 251   LYS    >                        ( 21.3 A from    O1  SO4 A 301  )
         E  <A 124   GLU    > matches  <A  36   GLU    >                        ( 15.8 A from    O1  SO4 A 301  )
 
KERBm  3*FOUND in 4uvm  size =    3  ^    GLUTATHIONE UPTAKE TRANSPORTER;                         #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.6758 -0.4734  0.5649 -0.6972 -0.1621  0.6983  0.2390  0.8658  0.4397   -13.273   -51.033   -90.839              
         T  <A  34   THR    > matches  <A 425   THR    >                        ( 20.0 A from    C4  78N A1516  )
         K  <A  60   LYS    > matches  <A 375   LYS    >                        ( 23.5 A from    C19 78N A1516  )
         E  <A 124   GLU    > matches  <A  21   GLU    >                        ( 10.9 A from    C3  78N A1517  )
 
KERBm  3*FOUND in 4g4s  size =    3  ^    PROTEASOME COMPONENT C7-ALPHA;                          #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.2960  0.5916  0.7499  0.2959 -0.8033  0.5169 -0.9082 -0.0689  0.4128   -21.609    38.313    16.791              
         T  <A  34   THR    > matches  <O  49   THR    > 
         K  <A  60   LYS    > matches  <O 129   LYS    > 
         E  <A 124   GLU    > matches  <O 184   GLU    > 
 
KERBm  3*FOUND in 2iew  size =    3  ^    INOSITOL POLYPHOSPHATE MULTIKINASE;                     #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.2459 -0.3256  0.9130 -0.5573 -0.7232 -0.4080 -0.7931  0.6091  0.0036    26.808    84.518    -9.906              
         T  <A  34   THR    > matches  <A 235   THR    >                        ( 18.0 A from   CA    CA A 501  )
         K  <A  60   LYS    > matches  <A 238   LYS    >                        ( 21.2 A from   CA    CA A 501  )
         E  <A 124   GLU    > matches  <A 268   GLU    >                        ( 10.3 A from   CA    CA A 501  )
 
KERBm  3*FOUND in 4izz  size =    3  ^    TRANSCRIPTION FACTOR HETR;                              #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.5490  0.3064  0.7776 -0.1031  0.9481 -0.3007  0.8294 -0.0849 -0.5521     0.493    -4.101   -22.168              
         T  <A  34   THR    > matches  <A  44   THR    >                        ( 23.2 A from    O2  EDO A 302  )
         K  <A  60   LYS    > matches  <A  47   LYS    >                        ( 28.5 A from    C2  EDO A 302  )
         E  <A 124   GLU    > matches  <A  99   GLU    >                        (  5.1 A from    C2  EDO A 302  )
 
KERBm  3*FOUND in 5bz3  size =    3  ^    NA(+)/H(+) ANTIPORTER;                                  #    2                            
  RMSD =     1.54 A
  TRANSFORM   -0.9664 -0.1525  0.2071 -0.2567  0.6227 -0.7392  0.0162  0.7675  0.6409     8.592   -12.132    48.198              
         T  <A  34   THR    > matches  <A 126   THR    >                        (  9.8 A from   H171 7E8 A 401  )
         K  <A  60   LYS    > matches  <A 305   LYS    >                        ( 12.4 A from   H171 7E8 A 401  )
         E  <A 124   GLU    > matches  <A 265   GLU    >                        ( -3.3 A from    H20 7E8 A 402s )
 
KERBm  3*FOUND in 2z1a  size =    3  ^    5'-NUCLEOTIDASE;                                        #    2                            
  RMSD =     1.54 A
  TRANSFORM    0.8680  0.3557  0.3465  0.4025 -0.9127 -0.0713 -0.2909 -0.2014  0.9353   -26.393    18.392   -43.215              
         T  <A  34   THR    > matches  <A 490   THR    >                        ( 13.8 A from    O3' THM A6510  )
         K  <A  60   LYS    > matches  <A 493   LYS    >                        ( 16.2 A from    O4  THM A6510  )
         E  <A 124   GLU    > matches  <A 428   GLU    >                        ( 15.4 A from    O3' THM A6510  )
 
KERBm  3*FOUND in 5f3r  size =    3  ^    UDP-GALACTOPYRANOSE MUTASE;                             #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.5211 -0.4697  0.7126  0.3389  0.8802  0.3323  0.7833 -0.0684 -0.6178    24.321   -10.610    37.291              
         T  <A  34   THR    > matches  <A  64   THR    >                        ( 14.6 A from    C1  DMS A 504  )
         K  <A  60   LYS    > matches  <A 318   LYS    >                        ( 16.6 A from    C1  DMS A 504  )
         E  <A 124   GLU    > matches  <A 218   GLU    >                        ( 14.2 A from    O3B FAD A 501  )
 
KERBm  3*FOUND in 2pm7  size =    3  ^    PROTEIN TRANSPORT PROTEIN SEC31;                        #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.5236 -0.8518 -0.0183 -0.6559 -0.4167  0.6294  0.5437  0.3176  0.7768    56.549    34.388   -16.639              
         T  <A  34   THR    > matches  <B 157   THR    > 
         K  <A  60   LYS    > matches  <B 170+  LYS    > 
         E  <A 124   GLU    > matches  <A 697   GLU    > 
 
KERBm  3*FOUND in 3lut  size =    3  ^    VOLTAGE-GATED POTASSIUM CHANNEL SUBUNIT BETA-2;         #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.8978  0.3981 -0.1882  0.1425  0.1419  0.9796 -0.4166  0.9063 -0.0707   -97.672   -54.630   -40.913              
         T  <A  34   THR    > matches  <A  86   THR    >                        (  7.1 A from    O2D NAP A 368  )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        (  3.9 A from    C2N NAP A 368  )
         E  <A 124   GLU    > matches  <A  67   GLU    >                        ( 18.0 A from    O3B NAP A 368  )
 
KERBm  3*FOUND in 2beq  size =    3  ^    E2 GLYCOPROTEIN;                                        #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.7643  0.1802 -0.6191  0.5573  0.6676 -0.4937 -0.3243  0.7224  0.6107    54.294   -15.873    17.400              
         T  <A  34   THR    > matches  <A 925   THR    >                        ( 38.0 A from    N   NH2 A 950  )
         K  <A  60   LYS    > matches  <A 929   LYS    >                        ( 35.6 A from    C   ACE D1147  )
         E  <A 124   GLU    > matches  <D1177   GLU    >                        ( 24.5 A from    N   NH2 D1194  )
 
KERBm  3*FOUND in 1hty  size =    3  ^    ALPHA-MANNOSIDASE II;                                   #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.4606  0.1082  0.8810 -0.8629  0.2873  0.4158  0.2081  0.9517 -0.2257     5.817    11.184   -29.053              
         T  <A  34   THR    > matches  <A 257   THR    >                        ( 27.5 A from   ZN    ZN A1102  )
         K  <A  60   LYS    > matches  <A 218   LYS    >                        ( 25.3 A from    O6  NAG A1101  )
         E  <A 124   GLU    > matches  <A  47   GLU    >                        ( 25.8 A from    O2  MRD A1104  )
 
KERBm  3*FOUND in 2x8u  size =    3  ^    SERINE PALMITOYLTRANSFERASE;                            #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.6074 -0.7943 -0.0130 -0.6950 -0.5392  0.4756  0.3848  0.2798  0.8796    36.710    10.525    12.516              
         T  <A  34   THR    > matches  <A 242   THR    >                        ( -3.5 A from    O1P PLP A1245s )
         K  <A  60   LYS    > matches  <A 245   LYS    >                        ( -1.3 A from    C4A PLP A1245s )
         E  <A 124   GLU    > matches  <A 262   GLU    >                        ( 20.0 A from    O1P PLP A1245  )
 
KERBm  3*FOUND in 1un2  size =    3  ^    THIOL-DISULFIDE INTERCHANGE PROTEIN;                    #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.2094  0.9436 -0.2565  0.4384  0.1438  0.8872 -0.8740  0.2982  0.3836    19.304   -14.204    21.291              
         T  <A  34   THR    > matches  <A  82   THR    > 
         K  <A  60   LYS    > matches  <A  93+  LYS    > 
         E  <A 124   GLU    > matches  <A 127   GLU    > 
 
KERBm  3*FOUND in 4txg  size =    3  ^    CHITINASE;                                              #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.1506  0.9613  0.2305 -0.6777 -0.2702  0.6839 -0.7197  0.0532 -0.6922    35.136    29.768    68.475              
         T  <A  34   THR    > matches  <A 248   THR    >                        ( 14.8 A from   CS    CS A 813  )
         K  <A  60   LYS    > matches  <A 240   LYS    >                        ( 16.4 A from   CS    CS A 804  )
         E  <A 124   GLU    > matches  <A 314   GLU    >                        ( -2.9 A from   CS    CS A 803s )
 
KERBm  3*FOUND in 6g42  size =    3  ^    MINOR CAPSID PROTEIN;                                   #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.5288 -0.1151  0.8409  0.6910 -0.6336  0.3479 -0.4928 -0.7651 -0.4146     1.791    29.087     1.321              
         T  <A  34   THR    > matches  <A 274   THR    > 
         K  <A  60   LYS    > matches  <A 282   LYS    > 
         E  <A 124   GLU    > matches  <A 252   GLU    > 
 
KERBm  3*FOUND in 1afw  size =    3  ^    3-KETOACETYL-COA THIOLASE;                              #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.7502 -0.6541  0.0966  0.2616  0.1594 -0.9519 -0.6072 -0.7394 -0.2907   -30.204    55.596    70.249              
         T  <A  34   THR    > matches  <A 307   THR    >                        ( 15.2 A from    C5  MRD A 501  )
         K  <A  60   LYS    > matches  <A 325   LYS    >                        ( 19.9 A from    C5  MRD A 501  )
         E  <A 124   GLU    > matches  <A  87   GLU    >                        ( 25.0 A from    C5  MRD A 501  )
 
KERBm  3*FOUND in 5fzo  size =    3  ^    PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATI     #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.0513  0.9698  0.2385 -0.2776  0.2433 -0.9294  0.9593  0.0185 -0.2817    47.210     0.237   -12.733              
         T  <A  34   THR    > matches  <A2332   THR    >                        ( 11.7 A from   MN    MN A3499  )
         K  <A  60   LYS    > matches  <A2260   LYS    >                        (  9.8 A from   MN    MN A3499  )
         E  <A 124   GLU    > matches  <A2369   GLU    >                        ( 26.7 A from   MN    MN A3499  )
 
KERBm  3*FOUND in 2rgh  size =    3  ^    ALPHA-GLYCEROPHOSPHATE OXIDASE;                         #    3                            
  RMSD =     1.54 A
  TRANSFORM   -0.8758 -0.3302 -0.3520  0.4748 -0.4588 -0.7510 -0.0865  0.8249 -0.5586    89.005    32.212    46.964              
         T  <A  34   THR    > matches  <A 299   THR    >                        (  7.4 A from    C7M FAD A 609  )
         K  <A  60   LYS    > matches  <A 256   LYS    >                        (  9.9 A from    C7M FAD A 609  )
         E  <A 124   GLU    > matches  <A 110   GLU    >                        ( 22.4 A from    C7M FAD A 609  )
 
KERBm  3*FOUND in 3pf7  size =    3  ^    BENZOYL-COA OXYGENASE COMPONENT B;                      #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.1911  0.7608  0.6203  0.8154 -0.2288  0.5318 -0.5465 -0.6074  0.5766    40.035    41.480    31.470              
         T  <A  34   THR    > matches  <A 283   THR    >                        ( 24.2 A from   HC22 MLA A1004  )
         K  <A  60   LYS    > matches  <A 286   LYS    >                        ( 26.1 A from   HC22 MLA A1004  )
         E  <A 124   GLU    > matches  <A 264   GLU    >                        ( 35.1 A from   FE    FE A1002  )
 
KERBm  3*FOUND in 1ati  size =    3  ^    GLYCYL-TRNA SYNTHETASE;                                 #    2                            
  RMSD =     1.54 A
  TRANSFORM    0.9141 -0.4021 -0.0522  0.3551  0.8560 -0.3758 -0.1958 -0.3250 -0.9252     9.258   -57.929    59.327              
         T  <A  34   THR    > matches  <A 377   THR    > 
         K  <A  60   LYS    > matches  <A   1+  LYS    > 
         E  <A 124   GLU    > matches  <A 486   GLU    > 
 
KERBm  3*FOUND in 4l07  size =    3  ^    HYDROLASE, ISOCHORISMATASE FAMILY;                      #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.7647  0.5337  0.3611 -0.2038  0.7319 -0.6502  0.6113 -0.4236 -0.6684    -1.021     8.473   -12.005              
         T  <A  34   THR    > matches  <A  68   THR    >                        ( 10.3 A from    O4  SO4 A 301  )
         K  <A  60   LYS    > matches  <A 116   LYS    >                        (  6.0 A from    O4  SO4 A 301  )
         E  <A 124   GLU    > matches  <A  53   GLU    >                        ( 16.8 A from    C3  GOL A 302  )
 
KERBm  3*FOUND in 5fq8  size =    3  ^    PUTATIVE LIPOPROTEIN;                                   #    2                            
  RMSD =     1.54 A
  TRANSFORM   -0.8560 -0.4905 -0.1632 -0.4446  0.5375  0.7165  0.2637 -0.6859  0.6782   149.785   -24.469    42.284              
         T  <A  34   THR    > matches  <G  12   THR    >                        ( 32.3 A from   CA    CA B1988  )
         K  <A  60   LYS    > matches  <G  10   LYS    >                        ( 34.2 A from   CA    CA B1988  )
         E  <A 124   GLU    > matches  <G  18   GLU    >                        ( 48.2 A from   CA    CA B1988  )
 
KERBm  3*FOUND in 6f87  size =    3  ^    THREONYLCARBAMOYL-AMP SYNTHASE;                         #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.9046 -0.4234  0.0494 -0.0539 -0.0014 -0.9985 -0.4228  0.9060  0.0216   -11.309    33.690    36.041              
         T  <A  34   THR    > matches  <A 224   THR    >                        ( 13.5 A from    O3  POP A 401  )
         K  <A  60   LYS    > matches  <A 231   LYS    >                        ( 11.2 A from    O3  POP A 401  )
         E  <A 124   GLU    > matches  <A  80   GLU    >                        ( 24.6 A from    O   THR A 402  )
 
KERBm  3*FOUND in 3wkx  size =    3  ^    NON-REDUCING END BETA-L-ARABINOFURANOSIDASE;            #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.3116 -0.2163  0.9253  0.1923  0.9680  0.1615  0.9306 -0.1276 -0.3432    46.605   -17.866   -19.998              
         T  <A  34   THR    > matches  <A 161   THR    >                        ( 26.1 A from   ZN    ZN A 702  )
         K  <A  60   LYS    > matches  <A  98   LYS    >                        ( 29.3 A from   ZN    ZN A 702  )
         E  <A 124   GLU    > matches  <A 436   GLU    >                        ( 30.1 A from    O3' FUB A 701  )
 
KERBm  3*FOUND in 4ygr  size =    3  ^    HYDROLASE;                                              #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.1056 -0.2281  0.9679 -0.8858  0.4207  0.1958  0.4518  0.8781  0.1576     4.588   -20.142    59.343              
         T  <A  34   THR    > matches  <A 109   THR    >                        (  7.5 A from    O3  NHE A 301  )
         K  <A  60   LYS    > matches  <A 141   LYS    >                        (  5.4 A from   MG    MG A 303  )
         E  <A 124   GLU    > matches  <A  79   GLU    >                        ( 18.4 A from    C2' NHE A 301  )
 
KERBm  3*FOUND in 4hss  size =    3  ^    PUTATIVE FIMBRIAL SUBUNIT;                              #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.6373 -0.6781  0.3661 -0.7672  0.5134 -0.3845 -0.0728  0.5259  0.8474    42.431    -0.566    39.816              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 52.0 A from   CA    CA A 501  )
         K  <A  60   LYS    > matches  <A 145   LYS    >                        ( 47.1 A from   CA    CA A 501  )
         E  <A 124   GLU    > matches  <A  72   GLU    >                        ( 65.5 A from   CA    CA A 501  )
 
KERBm  3*FOUND in 4aez  size =    3  ^    WD REPEAT-CONTAINING PROTEIN SLP1;                      #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.1514  0.1198 -0.9812  0.9042 -0.3843 -0.1865  0.3994  0.9154  0.0502    30.647    28.423    24.969              
         T  <A  34   THR    > matches  <A 258   THR    > 
         K  <A  60   LYS    > matches  <A 255   LYS    > 
         E  <A 124   GLU    > matches  <A 306   GLU    > 
 
KERBm  3*FOUND in 5ewn  size =    3  ^    STRUCTURAL PROTEIN;                                     #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.9472 -0.2715 -0.1705  0.3166 -0.8756 -0.3647  0.0502  0.3994 -0.9154    33.874    90.371    11.301              
         T  <A  34   THR    > matches  <A 278   THR    >                        ( 24.9 A from   CL    CL A 501  )
         K  <A  60   LYS    > matches  <A 397+  LYS    >                        ( 23.9 A from   CL    CL A 501  )
         E  <A 124   GLU    > matches  <A 316   GLU    >                        ( 31.0 A from   CL    CL A 501  )
 
KERBm  3*FOUND in 2q8k  size =    3  ^    PROLIFERATION-ASSOCIATED PROTEIN 2G4;                   #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.8159  0.5607  0.1412 -0.0587 -0.1627  0.9849 -0.5752  0.8119  0.0998     0.575   -30.106    23.977              
         T  <A  34   THR    > matches  <A  60   THR    >                        ( 11.4 A from    O1  GOL A 602  )
         K  <A  60   LYS    > matches  <A  72   LYS    >                        (  6.9 A from    O1  GOL A 602  )
         E  <A 124   GLU    > matches  <A  37   GLU    >                        ( 10.7 A from    O1  SO4 A 501  )
 
KERBm  3*FOUND in 5xnr  size =    3  ^    ALYQ;                                                   #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.1223  0.5269 -0.8411 -0.9631 -0.1416 -0.2287  0.2397 -0.8380 -0.4902    88.958    39.022     1.270              
         T  <A  34   THR    > matches  <A 344   THR    >                        ( 13.1 A from    K     K A 602  )
         K  <A  60   LYS    > matches  <A 342   LYS    >                        ( 12.6 A from    K     K A 602  )
         E  <A 124   GLU    > matches  <A 547   GLU    >                        ( 12.0 A from    O3  PO4 A 604  )
 
KERBm  3*FOUND in 5jaj  size =    3  ^    LGP2;                                                   #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.8154 -0.5565 -0.1596  0.3519  0.6953 -0.6267 -0.4597 -0.4548 -0.7628    71.699   139.533   206.216              
         T  <A  34   THR    > matches  <A 167   THR    >                        (  7.1 A from    F3  ALF A 703  )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        (  2.7 A from    F3  ALF A 703s )
         E  <A 124   GLU    > matches  <A 183   GLU    >                        ( 13.4 A from    C1  EDO A 707  )
 
KERBm  3*FOUND in 4wid  size =    3  ^    RHUL123;                                                #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.9913 -0.1206  0.0532 -0.0759  0.1918 -0.9785 -0.1078  0.9740  0.1992    55.158   -24.461    34.247              
         T  <A  34   THR    > matches  <A 220   THR    >                        ( 13.0 A from    CH2 MLY A 209  )
         K  <A  60   LYS    > matches  <A 216   LYS    >                        (  7.7 A from    CH2 MLY A 209  )
         E  <A 124   GLU    > matches  <A  58   GLU    >                        ( -3.1 A from    N   TRS A 401s )
 
KERBm  3*FOUND in 5x03  size =    3  ^    HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR;       #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.3183 -0.6566  0.6838  0.6639  0.6693  0.3336  0.6767 -0.3478 -0.6490   -10.568    27.414    32.352              
         T  <A  34   THR    > matches  <A 286   THR    >                        ( 16.8 A from    N1  PLP A 501  )
         K  <A  60   LYS    > matches  <A 368   LYS    >                        ( 18.9 A from    C5A PLP A 501  )
         E  <A 124   GLU    > matches  <A 201   GLU    >                        (  7.7 A from    C2A PLP A 501  )
 
KERBm  3*FOUND in 1l1o  size =    3  ^    REPLICATION PROTEIN A 14 KDA SUBUNIT;                   #    1                            
  RMSD =     1.54 A
  TRANSFORM   -0.0551  0.8106 -0.5830  0.0628 -0.5800 -0.8122  0.9965  0.0813  0.0189    41.358    28.359   -15.130              
         T  <A  34   THR    > matches  <C 530   THR    >                        ( 20.7 A from   ZN    ZN C   1  )
         K  <A  60   LYS    > matches  <C 588   LYS    >                        ( 19.4 A from   ZN    ZN C   1  )
         E  <A 124   GLU    > matches  <C 559   GLU    >                        ( 29.8 A from   ZN    ZN C   1  )
 
KERBm  3*FOUND in 5er9  size =    3  ^    UDP-GALACTOPYRANOSE MUTASE;                             #    2                            
  RMSD =     1.54 A
  TRANSFORM   -0.1245 -0.4321  0.8932  0.9640 -0.2657  0.0058 -0.2348 -0.8618 -0.4497   -11.346   -20.181   100.619              
         T  <A  34   THR    > matches  <A  64   THR    >                        ( 11.2 A from    O2  NO3 A 504  )
         K  <A  60   LYS    > matches  <A 318   LYS    >                        ( 11.6 A from    O1  NO3 A 505  )
         E  <A 124   GLU    > matches  <A 218   GLU    >                        ( 11.2 A from    O3  NO3 A 503  )
 
KERBm  3*FOUND in 3gkq  size =    3  ^    TERMINAL OXYGENASE COMPONENT OF CARBAZOLE 1,9A-DIOX     #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.5029  0.7685  0.3957 -0.8636  0.4654  0.1937  0.0354  0.4392 -0.8977    45.904   -22.410    90.017              
         T  <A  34   THR    > matches  <A 282   THR    >                        ( 15.4 A from   FE   FE2 A 501  )
         K  <A  60   LYS    > matches  <A 272   LYS    >                        ( 17.6 A from   FE   FE2 A 501  )
         E  <A 124   GLU    > matches  <A 308   GLU    >                        ( 31.1 A from   FE   FE2 A 501  )
 
KERBm  3*FOUND in 6b9t  size =    3  ^    METHYLPHOSPHONATE SYNTHASE;                             #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.4352 -0.6827 -0.5870  0.2599  0.7195 -0.6441 -0.8620 -0.1277 -0.4905   -38.843    53.263    -2.592              
         T  <A  34   THR    > matches  <A 194   THR    >                        ( 13.3 A from    CA  2HE A 502  )
         K  <A  60   LYS    > matches  <A 131   LYS    >                        ( 18.7 A from    CA  2HE A 502  )
         E  <A 124   GLU    > matches  <A 348   GLU    >                        ( 19.9 A from    O4  2HE A 502  )
 
KERBm  3*FOUND in 2prv  size =    3  ^    UNCHARACTERIZED PROTEIN YOBK;                           #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.8084  0.2934 -0.5103 -0.5881  0.4376 -0.6802 -0.0238 -0.8500 -0.5263   -47.384    71.803   106.713              
         T  <A  34   THR    > matches  <A  74   THR    >                        (  7.2 A from    O1  EDO A 159  )
         K  <A  60   LYS    > matches  <A  78   LYS    >                        ( -3.4 A from    O2  EDO A 159s )
         E  <A 124   GLU    > matches  <A  21   GLU    >                        ( 14.7 A from    O3  SO4 A 153  )
 
KERBm  3*FOUND in 5er9  size =    3  ^    UDP-GALACTOPYRANOSE MUTASE;                             #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.6977 -0.7067 -0.1174  0.3700  0.4959 -0.7856 -0.6134 -0.5047 -0.6075    29.502    13.460    96.012              
         T  <A  34   THR    > matches  <A 300   THR    >                        (  7.5 A from    O1B UDP A 501  )
         K  <A  60   LYS    > matches  <A 173   LYS    >                        (  9.2 A from    O4  UDP A 501  )
         E  <A 124   GLU    > matches  <A  59   GLU    >                        ( 10.5 A from    O3  NO3 A 503  )
 
KERBm  3*FOUND in 4e40  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    2                            
  RMSD =     1.54 A
  TRANSFORM   -0.5780  0.5426  0.6095 -0.3932  0.4693 -0.7907  0.7151  0.6966  0.0579    40.341    13.512     2.727              
         T  <A  34   THR    > matches  <A 221   THR    > 
         K  <A  60   LYS    > matches  <A 225   LYS    > 
         E  <A 124   GLU    > matches  <A 117   GLU    > 
 
KERBm  3*FOUND in 2ow6  size =    3  ^    ALPHA-MANNOSIDASE 2;                                    #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.4644  0.1171  0.8779 -0.8610  0.2921  0.4164  0.2076  0.9492 -0.2365     5.240    10.905   -28.818              
         T  <A  34   THR    > matches  <A 257   THR    >                        ( 27.4 A from   ZN    ZN A3001  )
         K  <A  60   LYS    > matches  <A 218   LYS    >                        ( 26.1 A from    O6  NAG A2001  )
         E  <A 124   GLU    > matches  <A  47   GLU    >                        ( 25.6 A from    O2  MRD A5001  )
 
KERBm  3*FOUND in 3eph  size =    3  ^    TRNA ISOPENTENYLTRANSFERASE;                            #    1                            
  RMSD =     1.54 A
  TRANSFORM    0.7780  0.0723 -0.6240  0.0337 -0.9967 -0.0734  0.6273 -0.0360  0.7779     5.820    24.508   -67.805              
         T  <A  34   THR    > matches  <A 118   THR    >                        ( 18.1 A from    O12 PPV A 422  )
         K  <A  60   LYS    > matches  <A 198   LYS    >                        ( 23.5 A from    O12 PPV A 422  )
         E  <A 124   GLU    > matches  <A  81   GLU    >                        ( 10.1 A from   MG    MG A   7  )
 
KERBm  3*FOUND in 5bp1  size =    3  ^    MYCOCEROSIC ACID SYNTHASE;                              #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.9335  0.1113  0.3409 -0.3528 -0.1150 -0.9286  0.0642  0.9871 -0.1466     0.622    -1.682     8.304              
         T  <A  34   THR    > matches  <A 350   THR    > 
         K  <A  60   LYS    > matches  <A 344   LYS    > 
         E  <A 124   GLU    > matches  <A 101   GLU    > 
 
KERBm  3*FOUND in 2qm0  size =    3  ^    BES;                                                    #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.9034 -0.4287  0.0089  0.0929 -0.2160 -0.9720 -0.4186  0.8773 -0.2350    33.904    66.169    33.962              
         T  <A  34   THR    > matches  <A 169   THR    >                        ( 14.9 A from    O   SVY A 157  )
         K  <A  60   LYS    > matches  <A 194   LYS    >                        ( 16.5 A from    O   SVY A 157  )
         E  <A 124   GLU    > matches  <A 141   GLU    >                        ( 24.4 A from    O   SVY A 157  )
 
KERBm  3*FOUND in 3is1  size =    3  ^    URO-ADHERENCE FACTOR A;                                 #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.3763 -0.8604 -0.3437  0.7702  0.4967 -0.4001 -0.5150  0.1142 -0.8496    46.222   -32.054    41.370              
         T  <A  34   THR    > matches  <X 793   THR    >                        ( 37.9 A from    O3  GOL X1000  )
         K  <A  60   LYS    > matches  <X 795   LYS    >                        ( 38.6 A from    O3  GOL X1000  )
         E  <A 124   GLU    > matches  <X 784   GLU    >                        ( 51.9 A from    O3  GOL X1000  )
 
KERBm  3*FOUND in 3sxy  size =    3  ^    TRANSCRIPTIONAL REGULATOR, GNTR FAMILY;                 #    2                            
  RMSD =     1.55 A
  TRANSFORM   -0.9683 -0.1717 -0.1813 -0.1858  0.0108  0.9825  0.1668 -0.9851  0.0423    39.543   -11.132   246.636              
         T  <A  34   THR    > matches  <A  72   THR    > 
         K  <A  60   LYS    > matches  <A  62   LYS    > 
         E  <A 124   GLU    > matches  <A 165   GLU    > 
 
KERBm  3*FOUND in 2qj8  size =    3  ^    MLR6093 PROTEIN;                                        #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.5193 -0.8510 -0.0784 -0.8443 -0.5250  0.1071  0.1324 -0.0106  0.9911    46.745    84.680     5.256              
         T  <A  34   THR    > matches  <A 250   THR    > 
         K  <A  60   LYS    > matches  <A 171   LYS    > 
         E  <A 124   GLU    > matches  <A 278   GLU    > 
 
KERBm  3*FOUND in 3zrx  size =    3  ^    AF1503 PROTEIN, OSMOLARITY SENSOR PROTEIN ENVZ;         #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.8962  0.2968 -0.3299 -0.4008  0.2220 -0.8889  0.1905 -0.9288 -0.3179    -8.049    41.253    26.825              
         T  <A  34   THR    > matches  <A 281   THR    > 
         K  <A  60   LYS    > matches  <A 278+  LYS    > 
         E  <A 124   GLU    > matches  <A 296   GLU    > 
 
KERBm  3*FOUND in 4qe0  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.3724  0.4050  0.8350  0.2057 -0.9134  0.3512 -0.9050 -0.0410  0.4235   -39.073   -28.127    79.991              
         T  <A  34   THR    > matches  <A 111   THR    >                        (  3.8 A from    N   MLY A 112  )
         K  <A  60   LYS    > matches  <A 113+  LYS    >                        (  2.9 A from    O   MLY A 112  )
         E  <A 124   GLU    > matches  <A 166   GLU    >                        (  5.2 A from    O   MLY A 163  )
 
KERBm  3*FOUND in 1vl1  size =    3  ^    6-PHOSPHOGLUCONOLACTONASE;                              #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.3119  0.3118  0.8975  0.8588  0.4965  0.1260  0.4063 -0.8101  0.4227    -1.702   -18.300    32.128              
         T  <A  34   THR    > matches  <A 177   THR    >                        ( 19.6 A from    O3  CIT A 300  )
         K  <A  60   LYS    > matches  <A 211   LYS    >                        ( 23.4 A from    O3  CIT A 300  )
         E  <A 124   GLU    > matches  <A  69   GLU    >                        ( 10.2 A from    O4  CIT A 300  )
 
KERBm  3*FOUND in 2g8l  size =    3  ^    287AA LONG HYPOTHETICAL PROTEIN;                        #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.4479  0.8922  0.0576 -0.8831  0.4515 -0.1275  0.1398 -0.0062 -0.9902   -55.066   -26.504    55.966              
         T  <A  34   THR    > matches  <A 155   THR    >                        ( 10.4 A from    O8  UNL A 288  )
         K  <A  60   LYS    > matches  <A 184   LYS    >                        (  6.8 A from    O8  UNL A 288  )
         E  <A 124   GLU    > matches  <A 173   GLU    >                        ( 26.1 A from    O1  UNL A 288  )
 
KERBm  3*FOUND in 2r4f  size =    3  ^    3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE;        #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.5559  0.4733 -0.6833  0.8310  0.3364 -0.4430 -0.0202  0.8141  0.5804    57.930   -59.734    21.679              
         T  <A  34   THR    > matches  <A 636   THR    >                        ( 17.9 A from    O7  RIE A 876  )
         K  <A  60   LYS    > matches  <A 606   LYS    >                        ( 21.1 A from    O7  RIE A 876  )
         E  <A 124   GLU    > matches  <A 801   GLU    >                        (  9.5 A from    O3  RIE A 876  )
 
KERBm  3*FOUND in 1ps3  size =    3  ^    ALPHA-MANNOSIDASE II;                                   #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.4654  0.1064  0.8787 -0.8602  0.2882  0.4207  0.2085  0.9516 -0.2257     5.630    11.069   -29.001              
         T  <A  34   THR    > matches  <A 257   THR    >                        ( 27.6 A from    O6  NAG A1046  )
         K  <A  60   LYS    > matches  <A 218   LYS    >                        ( 25.2 A from    O6  NAG A1046  )
         E  <A 124   GLU    > matches  <A  47   GLU    >                        ( 25.7 A from    O2  MRD A1602  )
 
KERBm  3*FOUND in 3guu  size =    3  ^    LIPASE A;                                               #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.2131  0.2042 -0.9554 -0.9765  0.0128 -0.2151  0.0317 -0.9788 -0.2021    14.235     2.205    48.038              
         T  <A  34   THR    > matches  <A  62   THR    >                        ( 13.8 A from    O3  GOL A 443  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        ( 17.2 A from    O3  GOL A 443  )
         E  <A 124   GLU    > matches  <A 249   GLU    >                        ( 10.4 A from    O2  GOL A 443  )
 
KERBm  3*FOUND in 2bp1  size =    3  ^    AFLATOXIN B1 ALDEHYDE REDUCTASE MEMBER 2;               #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.9570  0.2897  0.0128  0.2870 -0.9397 -0.1859  0.0418 -0.1816  0.9825    15.031    18.457    30.845              
         T  <A  34   THR    > matches  <A 235   THR    >                        ( -3.9 A from    N3A NDP A1361s )
         K  <A  60   LYS    > matches  <A 237   LYS    >                        ( -2.9 A from    N3A NDP A1361s )
         E  <A 124   GLU    > matches  <A 209   GLU    >                        ( 16.3 A from    O1A NDP A1361  )
 
KERBm  3*FOUND in 2je2  size =    3  ^    CYTOCHROME P460;                                        #    2                            
  RMSD =     1.55 A
  TRANSFORM   -0.1146 -0.6825 -0.7218 -0.0466 -0.7221  0.6902  0.9923 -0.1127 -0.0510    49.998     6.418     0.358              
         T  <A  34   THR    > matches  <A  29   THR    >                        (  7.1 A from    O1D HEC A1171  )
         K  <A  60   LYS    > matches  <A  41+  LYS    >                        ( 11.0 A from    O1D HEC A1171  )
         E  <A 124   GLU    > matches  <A 142   GLU    >                        (  8.4 A from    CBC HEC A1171  )
 
KERBm  3*FOUND in 1ulv  size =    3  ^    GLUCODEXTRANASE;                                        #    2                            
  RMSD =     1.55 A
  TRANSFORM    0.6038 -0.7964 -0.0329 -0.3457 -0.2989  0.8894  0.7182  0.5257  0.4559    31.570     3.761   -30.609              
         T  <A  34   THR    > matches  <A 300   THR    >                        ( 19.6 A from   CA    CA A2001  )
         K  <A  60   LYS    > matches  <A  32   LYS    >                        ( 21.5 A from   CA    CA A2001  )
         E  <A 124   GLU    > matches  <A 409   GLU    >                        ( -3.3 A from   CA    CA A2002s )
 
KERBm  3*FOUND in 3v9a  size =    3  ^    ESTERASE/LIPASE;                                        #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.4437 -0.4671  0.7648 -0.8166  0.5623 -0.1304  0.3691  0.6824  0.6310    34.153   -23.421     2.530              
         T  <A  34   THR    > matches  <A 178   THR    >                        ( 21.7 A from    O3  SO4 A 403  )
         K  <A  60   LYS    > matches  <A 213   LYS    >                        ( 27.2 A from    O3  SO4 A 403  )
         E  <A 124   GLU    > matches  <A  23   GLU    >                        (  6.7 A from    O3  SO4 A 403  )
 
KERBm  3*FOUND in 5noe  size =    3  ^    ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE;                 #    3                            
  RMSD =     1.55 A
  TRANSFORM    0.5892  0.8044  0.0754  0.1384 -0.0085 -0.9903  0.7960 -0.5940  0.1163     5.069    18.738    -3.057              
         T  <A  34   THR    > matches  <A  72   THR    > 
         K  <A  60   LYS    > matches  <A 101   LYS    > 
         E  <A 124   GLU    > matches  <A 302   GLU    > 
 
KERBm  3*FOUND in 6a5k  size =    3  ^    HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPE     #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.3361 -0.3827 -0.8606  0.2132 -0.9209  0.3263  0.9174  0.0738 -0.3911    72.098    28.089    22.785              
         T  <A  34   THR    > matches  <A 391   THR    >                        ( 41.4 A from   ZN    ZN A 804  )
         K  <A  60   LYS    > matches  <A 477   LYS    >                        ( 45.9 A from   ZN    ZN A 804  )
         E  <A 124   GLU    > matches  <A 488   GLU    >                        ( 26.2 A from    N   SAM A 805  )
 
KERBm  3*FOUND in 4pzv  size =    3  ^    2-AMINO-4-HYDROXY-6-HYDROXYMETHYLDIHYDROPTERIDINE       #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.8076 -0.5808 -0.1024 -0.5334 -0.7934  0.2932  0.2515  0.1822  0.9505    29.515    11.031     9.969              
         T  <A  34   THR    > matches  <A  14   THR    >                        ( 11.4 A from    N10 J1D A 501  )
         K  <A  60   LYS    > matches  <A 248   LYS    >                        ( 13.9 A from    N9  J1D A 501  )
         E  <A 124   GLU    > matches  <A  26   GLU    >                        ( 12.0 A from    O1  EDO A 505  )
 
KERBm  3*FOUND in 6at7  size =    3  ^    PHENYLALANINE AMMONIA-LYASE;                            #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.6588 -0.2127 -0.7216 -0.6604 -0.2960  0.6901  0.3604 -0.9312 -0.0546     0.131    47.987    58.832              
         T  <A  34   THR    > matches  <A 528   THR    >                        ( 75.1 A from   HA32 MDO A 190  )
         K  <A  60   LYS    > matches  <A 532   LYS    >                        ( 79.3 A from   HA32 MDO A 190  )
         E  <A 124   GLU    > matches  <A 516   GLU    >                        ( 57.2 A from    N   MDO A 190  )
 
KERBm  3*FOUND in 2wus  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.7932  0.4000 -0.4591 -0.5066 -0.8518  0.1332  0.3378 -0.3383 -0.8783    62.653    53.306    60.023              
         T  <A  34   THR    > matches  <R  11   THR    > 
         K  <A  60   LYS    > matches  <R  14   LYS    > 
         E  <A 124   GLU    > matches  <R  81   GLU    > 
 
KERBm  3*FOUND in 4g9k  size =    3  ^    ROTENONE-INSENSITIVE NADH-UBIQUINONE OXIDOREDUCTASE     #    1                            
  RMSD =     1.55 A
  TRANSFORM   -0.7669  0.6414  0.0209 -0.5146 -0.6341  0.5772 -0.3835 -0.4319 -0.8163    41.427     9.402    -3.875              
         T  <A  34   THR    > matches  <A 348   THR    >                        ( 12.0 A from    N6A FAD A 601  )
         K  <A  60   LYS    > matches  <A 352   LYS    >                        ( 16.0 A from    N6A FAD A 601  )
         E  <A 124   GLU    > matches  <A 197   GLU    >                        (  4.8 A from    O2B FAD A 601  )
 
KERBm  3*FOUND in 1a4s  size =    3  ^    BETAINE ALDEHYDE DEHYDROGENASE;                         #    1                            
  RMSD =     1.55 A
  TRANSFORM    0.3312  0.8694  0.3666  0.8950 -0.4125  0.1698 -0.2989 -0.2719  0.9148    50.215     8.552    26.782              
         T  <A  34   THR    > matches  <A 301   THR    > 
         K  <A  60   LYS    > matches  <A 267   LYS    > 
         E  <A 124   GLU    > matches  <A 279   GLU    > 
 
KERBm  3*FOUND in 6bzb  size =    3  ^    GLUCOSE-6-PHOSPHATE ISOMERASE;                          #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.7592  0.5423 -0.3599 -0.3437 -0.1354 -0.9292  0.5527 -0.8292 -0.0836    -2.243     8.282     3.503              
         T  <A  34   THR    > matches  <A 200   THR    > 
         K  <A  60   LYS    > matches  <A 145   LYS    > 
         E  <A 124   GLU    > matches  <A 191   GLU    > 
 
KERBm  3*FOUND in 1b6g  size =    3  ^    HALOALKANE DEHALOGENASE;                                #    2                            
  RMSD =     1.56 A
  TRANSFORM   -0.5171  0.4646  0.7189  0.5779 -0.4301  0.6936 -0.6314 -0.7741  0.0460    14.236   -26.054    60.932              
         T  <A  34   THR    > matches  <A 197   THR    >                        ( -3.3 A from   CL    CL A1999s )
         K  <A  60   LYS    > matches  <A 192   LYS    >                        (  7.4 A from   CL    CL A1999  )
         E  <A 124   GLU    > matches  <A 301   GLU    >                        (  9.5 A from    O2  GOL A1206  )
 
KERBm  3*FOUND in 3oiy  size =    3  ^    REVERSE GYRASE HELICASE DOMAIN;                         #    2                            
  RMSD =     1.56 A
  TRANSFORM    0.0410  0.9977 -0.0539  0.8246 -0.0033  0.5658 -0.5643  0.0676  0.8228    23.311   -33.643     9.390              
         T  <A  34   THR    > matches  <A 289   THR    >                        ( 43.3 A from    O2  POP A   1  )
         K  <A  60   LYS    > matches  <A 482   LYS    >                        ( 41.6 A from    O2  POP A   1  )
         E  <A 124   GLU    > matches  <A 492   GLU    >                        ( 50.2 A from    O2  POP A   1  )
 
KERBm  3*FOUND in 3ld1  size =    3  ^    REPLICASE POLYPROTEIN 1A;                               #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.9101  0.4074  0.0753  0.4124  0.8735  0.2587 -0.0396 -0.2665  0.9630    -8.060    -6.063    36.319              
         T  <A  34   THR    > matches  <A 233   THR    > 
         K  <A  60   LYS    > matches  <A 211   LYS    > 
         E  <A 124   GLU    > matches  <A 193   GLU    > 
 
KERBm  3*FOUND in 3fak  size =    3  ^    ESTERASE/LIPASE;                                        #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.4348 -0.4671  0.7699 -0.8134  0.5705 -0.1133  0.3863  0.6755  0.6281    34.165   -23.754     2.544              
         T  <A  34   THR    > matches  <A 178   THR    >                        ( 17.9 A from   CL    CL A 310  )
         K  <A  60   LYS    > matches  <A 213   LYS    >                        ( 21.7 A from   CL    CL A 310  )
         E  <A 124   GLU    > matches  <A  23   GLU    >                        ( 20.7 A from   CL    CL A 310  )
 
KERBm  3*FOUND in 4jps  size =    3  ^    PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE 3-KINASE CATA     #    2                            
  RMSD =     1.56 A
  TRANSFORM   -0.7150 -0.6991 -0.0110  0.6323 -0.6532  0.4166  0.2985 -0.2909 -0.9090    -4.363   -42.949    53.704              
         T  <A  34   THR    > matches  <A 679   THR    >                        ( 25.8 A from    F   1LT A1102  )
         K  <A  60   LYS    > matches  <A 640   LYS    >                        ( 21.9 A from    F   1LT A1102  )
         E  <A 124   GLU    > matches  <B 485   GLU    >                        ( 34.2 A from    F   1LT A1102  )
 
KERBm  3*FOUND in 5tcg  size =    3  ^    TRYPTOPHAN SYNTHASE ALPHA CHAIN;                        #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.7259 -0.6630 -0.1832  0.2108  0.0391 -0.9768 -0.6548  0.7476 -0.1113    60.684     1.146    66.024              
         T  <A  34   THR    > matches  <B 204   THR    >                        ( -3.6 A from    OP2 P1T B 501s )
         K  <A  60   LYS    > matches  <B 101   LYS    >                        ( -3.0 A from    OP2 P1T B 501s )
         E  <A 124   GLU    > matches  <A 141   GLU    >                        ( 21.4 A from   CS    CS B 502  )
 
KERBm  3*FOUND in 5vyd  size =    3  ^    PHOSPHODIESTERASE;                                      #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.0145 -0.6407  0.7677 -0.8914 -0.3396 -0.3002 -0.4530  0.6887  0.5662    12.464    54.133   -13.284              
         T  <A  34   THR    > matches  <A 197   THR    >                        ( 11.0 A from   MG    MG A 402  )
         K  <A  60   LYS    > matches  <A 201   LYS    >                        ( 11.2 A from   MG    MG A 402  )
         E  <A 124   GLU    > matches  <A 265   GLU    >                        ( 16.4 A from   MG    MG A 402  )
 
KERBm  3*FOUND in 4h8n  size =    3  ^    CONJUGATED POLYKETONE REDUCTASE C2;                     #    2                            
  RMSD =     1.56 A
  TRANSFORM   -0.5496  0.6410 -0.5358 -0.2648  0.4746  0.8394 -0.7923 -0.6032  0.0912    13.485   -62.043    63.988              
         T  <A  34   THR    > matches  <A  27   THR    >                        ( -3.2 A from    O1N NDP A3001s )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        (  8.9 A from    O3D NDP A3001  )
         E  <A 124   GLU    > matches  <A 270   GLU    >                        (  6.8 A from    N6A NDP A3001  )
 
KERBm  3*FOUND in 3s8f  size =    3  ^    CYTOCHROME C OXIDASE SUBUNIT 1;                         #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.5104 -0.6580  0.5535 -0.0972  0.6837  0.7232  0.8544 -0.3154  0.4130    -5.722   -20.167    36.871              
         T  <A  34   THR    > matches  <B 138   THR    >                        ( 12.8 A from    O25 OLC B 169  )
         K  <A  60   LYS    > matches  <B 140   LYS    >                        (  9.5 A from    O25 OLC B 169  )
         E  <A 124   GLU    > matches  <B  51   GLU    >                        ( 14.2 A from    C21 OLC B 172  )
 
KERBm  3*FOUND in 5l53  size =    3  ^    (-)-MENTHONE:(+)-NEOMENTHOL REDUCTASE;                  #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.6791 -0.5732 -0.4585  0.7043 -0.3328 -0.6271 -0.2069  0.7488 -0.6297    37.420   -25.323    11.569              
         T  <A  34   THR    > matches  <A  39   THR    >                        ( 20.2 A from    O3B NAP A 400  )
         K  <A  60   LYS    > matches  <A  13   LYS    >                        ( 23.2 A from    O3B NAP A 400  )
         E  <A 124   GLU    > matches  <A  52   GLU    >                        ( 13.2 A from    O1X NAP A 400  )
 
KERBm  3*FOUND in 2pt7  size =    3  ^    CAG-ALFA;                                               #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.3397 -0.9213 -0.1891  0.9388  0.3200  0.1277  0.0571  0.2209 -0.9736    25.220   -31.414   -15.604              
         T  <A  34   THR    > matches  <A 186   THR    > 
         K  <A  60   LYS    > matches  <A 189   LYS    > 
         E  <A 124   GLU    > matches  <A  64   GLU    > 
 
KERBm  3*FOUND in 2vw2  size =    3  ^    SIALIDASE B;                                            #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.4250 -0.8411 -0.3344  0.9017 -0.3612 -0.2375 -0.0789  0.4025 -0.9120    81.155    26.961    -7.242              
         T  <A  34   THR    > matches  <A 454   THR    >                        ( 16.6 A from    C4' NHE A1000  )
         K  <A  60   LYS    > matches  <A 372   LYS    >                        ( 20.9 A from    C4' NHE A1000  )
         E  <A 124   GLU    > matches  <A 433   GLU    >                        ( 18.6 A from    C6' NHE A1000  )
 
KERBm  3*FOUND in 5i9e  size =    3  ^    ACTIN-RELATED PROTEIN 4;                                #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.3811  0.2315  0.8951  0.7649  0.4649 -0.4459  0.5194 -0.8546 -0.0001  -125.264   -64.593   180.269              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 16.4 A from    O2B ATP A1002  )
         K  <A  60   LYS    > matches  <A  55   LYS    >                        ( 20.2 A from    O2B ATP A1002  )
         E  <A 124   GLU    > matches  <A 112   GLU    >                        ( 13.1 A from    O1G ATP A1002  )
 
KERBm  3*FOUND in 5ewq  size =    3  ^    AMIDASE;                                                #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.4154  0.8698  0.2663 -0.7351  0.1485  0.6614 -0.5358  0.4705 -0.7011    35.460     2.666    31.001              
         T  <A  34   THR    > matches  <A 201   THR    >                        ( 35.9 A from    OXT ACT A 601  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        ( 32.7 A from    O   ACT A 601  )
         E  <A 124   GLU    > matches  <A 435   GLU    >                        ( 46.1 A from    OXT ACT A 601  )
 
KERBm  3*FOUND in 5ubu  size =    3  ^    PUTATIVE ACETAMIDASE/FORMAMIDASE;                       #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.7049 -0.3976  0.5873  0.1511  0.7249  0.6721  0.6930 -0.5625  0.4509    21.599   -46.832    63.046              
         T  <A  34   THR    > matches  <A 183   THR    >                        ( 10.5 A from   NA    NA A 401  )
         K  <A  60   LYS    > matches  <A 315   LYS    >                        ( 15.5 A from   NA    NA A 401  )
         E  <A 124   GLU    > matches  <A  32   GLU    >                        ( 20.8 A from   NA    NA A 401  )
 
KERBm  3*FOUND in 1gwi  size =    3  ^    CYTOCHROME P450 154C1;                                  #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.4403  0.8716 -0.2154  0.6207 -0.1221  0.7745 -0.6487  0.4747  0.5948     7.698   -21.034    34.289              
         T  <A  34   THR    > matches  <A 201   THR    >                        (  8.9 A from    O2  SO4 A1413  )
         K  <A  60   LYS    > matches  <A 205   LYS    >                        (  4.8 A from    O2  SO4 A1413  )
         E  <A 124   GLU    > matches  <A 175   GLU    >                        ( 17.2 A from    CMC HEM A1414  )
 
KERBm  3*FOUND in 4mby  size =    3  ^    MAJOR CAPSID PROTEIN VP1;                               #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.6615  0.4100 -0.6280 -0.7380  0.2070 -0.6422  0.1333 -0.8883 -0.4395    47.616    95.195    76.272              
         T  <A  34   THR    > matches  <A 272   THR    >                        (  8.6 A from    O1B SIA A 409  )
         K  <A  60   LYS    > matches  <A 133   LYS    >                        ( 11.5 A from    O1B SIA A 409  )
         E  <A 124   GLU    > matches  <A 207   GLU    >                        ( 11.8 A from    O1  EDO A 404  )
 
KERBm  3*FOUND in 4g6v  size =    3  ^    ADHESIN/HEMOLYSIN;                                      #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.6249  0.7801  0.0306 -0.3230 -0.2227 -0.9198  0.7108  0.5847 -0.3911   -12.859     1.306    67.197              
         T  <A  34   THR    > matches  <A 193   THR    >                        ( 18.6 A from   BR    BR A 301  )
         K  <A  60   LYS    > matches  <A 197   LYS    >                        ( 25.7 A from   BR    BR A 301  )
         E  <A 124   GLU    > matches  <B  98   GLU    >                        (  8.1 A from   BR    BR A 302  )
 
KERBm  3*FOUND in 3fr7  size =    3  ^    PUTATIVE KETOL-ACID REDUCTOISOMERASE (OS05G0573700      #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.8242  0.5115  0.2429  0.3014 -0.0330 -0.9529  0.4794 -0.8586  0.1814    33.104    56.796    13.598              
         T  <A  34   THR    > matches  <A 543   THR    >                        ( 31.9 A from   MG    MG A1576  )
         K  <A  60   LYS    > matches  <A 546   LYS    >                        ( 34.8 A from   MG    MG A1576  )
         E  <A 124   GLU    > matches  <A 477   GLU    >                        ( 21.2 A from   MG    MG A1577  )
 
KERBm  3*FOUND in 4n9n  size =    3  ^    STEROL UPTAKE CONTROL PROTEIN 2, LYSOZYME;              #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.8179 -0.3609  0.4482  0.1411 -0.6293 -0.7642 -0.5578 -0.6883  0.4638    90.721    -7.706    10.318              
         T  <A  34   THR    > matches  <A 860   THR    > 
         K  <A  60   LYS    > matches  <A 865   LYS    > 
         E  <A 124   GLU    > matches  <A 785   GLU    > 
 
KERBm  3*FOUND in 4pjw  size =    3  ^    COHESIN SUBUNIT SA-2;                                   #    3                            
  RMSD =     1.56 A
  TRANSFORM    0.7561 -0.4905 -0.4333  0.5949  0.2392  0.7674  0.2728  0.8380 -0.4726    43.520    24.710     6.049              
         T  <A  34   THR    > matches  <B 366   THR    >                        ( 51.5 A from    H22 MES A1101  )
         K  <A  60   LYS    > matches  <B 371   LYS    >                        ( 52.9 A from    H22 MES A1101  )
         E  <A 124   GLU    > matches  <A 475   GLU    >                        ( 45.1 A from    H22 MES A1101  )
 
KERBm  3*FOUND in 3bcy  size =    3  ^    PROTEIN YER067W;                                        #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.2000 -0.8072  0.5554 -0.9797  0.1730 -0.1014  0.0142  0.5644  0.8254    31.144     1.969     5.680              
         T  <A  34   THR    > matches  <A 120   THR    > 
         K  <A  60   LYS    > matches  <A 118   LYS    > 
         E  <A 124   GLU    > matches  <A 125   GLU    > 
 
KERBm  3*FOUND in 4wve  size =    3  ^    SURFACE PROTEIN G;                                      #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.1782 -0.8776  0.4451 -0.8294 -0.3773 -0.4120 -0.5295  0.2957  0.7951   -46.867    -0.617   -22.107              
         T  <A  34   THR    > matches  <A 595   THR    >                        ( 92.0 A from   CL    CL A 801  )
         K  <A  60   LYS    > matches  <A 597   LYS    >                        ( 94.3 A from   CL    CL A 801  )
         E  <A 124   GLU    > matches  <A 613   GLU    >                        ( 77.8 A from   CL    CL A 801  )
 
KERBm  3*FOUND in 2d4x  size =    3  ^    FLAGELLAR HOOK-ASSOCIATED PROTEIN 3;                    #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.3878  0.9068  0.1652 -0.4061  0.0072  0.9138 -0.8275  0.4214 -0.3711    -5.885   -42.153    34.664              
         T  <A  34   THR    > matches  <A  89   THR    > 
         K  <A  60   LYS    > matches  <A  93   LYS    > 
         E  <A 124   GLU    > matches  <A  77   GLU    > 
 
KERBm  3*FOUND in 3wkx  size =    3  ^    NON-REDUCING END BETA-L-ARABINOFURANOSIDASE;            #    2                            
  RMSD =     1.56 A
  TRANSFORM    0.1043 -0.0911  0.9904  0.5345  0.8449  0.0214  0.8387 -0.5271 -0.1368    55.246   -33.535    -8.928              
         T  <A  34   THR    > matches  <A 161   THR    >                        ( 26.1 A from   ZN    ZN A 702  )
         K  <A  60   LYS    > matches  <A  98   LYS    >                        ( 29.3 A from   ZN    ZN A 702  )
         E  <A 124   GLU    > matches  <A 454   GLU    >                        ( 36.7 A from   ZN    ZN A 702  )
 
KERBm  3*FOUND in 3u7v  size =    3  ^    BETA-GALACTOSIDASE;                                     #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.1989 -0.5174  0.8323  0.3428 -0.8323 -0.4355 -0.9181 -0.1987 -0.3430    13.716    35.544    -6.594              
         T  <A  34   THR    > matches  <A 548   THR    >                        ( 30.5 A from    O   ACY A 551  )
         K  <A  60   LYS    > matches  <A 501   LYS    >                        ( 35.3 A from    O   ACY A 551  )
         E  <A 124   GLU    > matches  <A 509   GLU    >                        ( 10.2 A from    O   ACY A 551  )
 
KERBm  3*FOUND in 5vi4  size =    3  ^    INTERLEUKIN-33;                                         #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.6996  0.6966  0.1593 -0.3707  0.1632  0.9143 -0.6109  0.6987 -0.3724   -23.806    28.828    -7.916              
         T  <A  34   THR    > matches  <B 127   THR    >                        ( 30.1 A from    C8  NAG B 401  )
         K  <A  60   LYS    > matches  <A 149   LYS    >                        ( 30.5 A from    C8  NAG B 401  )
         E  <A 124   GLU    > matches  <C 152   GLU    >                        ( 33.6 A from    C8  NAG B 401  )
 
KERBm  3*FOUND in 2vqe  size =    3  ^    16S RRNA;                                               #    2                            
  RMSD =     1.56 A
  TRANSFORM   -0.7933  0.2154  0.5694  0.5933  0.0637  0.8025 -0.1366 -0.9744  0.1783   195.242  -171.762   181.052              
         T  <A  34   THR    > matches  <U   8   THR    >                        (-16.7 A from   MG    MG M 201s )
         K  <A  60   LYS    > matches  <U   2+  LYS    >                        ( 19.7 A from   MG    MG M 201  )
         E  <A 124   GLU    > matches  <M  35   GLU    >                        ( 17.9 A from   MG    MG M 201  )
 
KERBm  3*FOUND in 3uxf  size =    3  ^    FIMBRIAL SUBUNIT TYPE 1;                                #    1                            
  RMSD =     1.56 A
  TRANSFORM    0.5761  0.3434 -0.7417  0.8091 -0.3681  0.4581  0.1157  0.8641  0.4899     6.905   -23.629    16.635              
         T  <A  34   THR    > matches  <A 408   THR    >                        ( 12.1 A from   CA    CA A   2  )
         K  <A  60   LYS    > matches  <A 413   LYS    >                        ( 10.4 A from   CA    CA A   2  )
         E  <A 124   GLU    > matches  <A 239   GLU    >                        ( 28.9 A from   CA    CA A   2  )
 
KERBm  3*FOUND in 2zxe  size =    3  ^    NA, K-ATPASE ALPHA SUBUNIT;                             #    5                            
  RMSD =     1.56 A
  TRANSFORM    0.4372 -0.4048 -0.8031 -0.2812 -0.9097  0.3055  0.8543 -0.0922  0.5116   -51.846    60.965   -93.574              
         T  <A  34   THR    > matches  <B  87   THR    >                        ( 25.9 A from    C8  NAG B4021  )
         K  <A  60   LYS    > matches  <B 300   LYS    >                        ( 26.8 A from    C8  NAG B4021  )
         E  <A 124   GLU    > matches  <A 915   GLU    >                        ( 19.4 A from    K     K A2004  )
 
KERBm  3*FOUND in 3c8y  size =    3  ^    IRON HYDROGENASE 1;                                     #    2                            
  RMSD =     1.56 A
  TRANSFORM   -0.8544  0.5077  0.1105  0.4994  0.7437  0.4444 -0.1434 -0.4349  0.8890    27.639   -41.538    -5.978              
         T  <A  34   THR    > matches  <A 330   THR    >                        ( 11.1 A from    O1 AGOL A 581  )
         K  <A  60   LYS    > matches  <A 369   LYS    >                        ( 11.0 A from    O1 AGOL A 581  )
         E  <A 124   GLU    > matches  <A 409   GLU    >                        ( 15.6 A from    O7 AHCN A 575  )
 
KERBm  3*FOUND in 4gf2  size =    3  ^    ERYTHROCYTE BINDING ANTIGEN 140;                        #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.4824  0.3328 -0.8102 -0.0859 -0.9385 -0.3344  0.8717  0.0917 -0.4814   -42.764     2.957    41.373              
         T  <A  34   THR    > matches  <A 479   THR    >                        ( 10.2 A from    H11 GOL A 808  )
         K  <A  60   LYS    > matches  <A 682   LYS    >                        ( 13.7 A from    H32 GOL A 815  )
         E  <A 124   GLU    > matches  <A 515   GLU    >                        (  5.5 A from    H11 GOL A 804  )
 
KERBm  3*FOUND in 1xoc  size =    3  ^    OLIGOPEPTIDE-BINDING PROTEIN APPA;                      #    2                            
  RMSD =     1.56 A
  TRANSFORM   -0.5248 -0.8416 -0.1278 -0.4189  0.3860 -0.8219 -0.7410  0.3778  0.5551    73.407   -12.702    25.592              
         T  <A  34   THR    > matches  <A 423   THR    >                        ( 14.4 A from   ZN    ZN A 533  )
         K  <A  60   LYS    > matches  <A 507   LYS    >                        (  9.9 A from   ZN    ZN A 533  )
         E  <A 124   GLU    > matches  <A  75   GLU    >                        ( 18.4 A from   ZN    ZN A 525  )
 
KERBm  3*FOUND in 1fp2  size =    3  ^    ISOFLAVONE O-METHYLTRANSFERASE;                         #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.3639 -0.8346 -0.4135  0.5940 -0.5499  0.5872  0.7175  0.0319 -0.6959    24.166    -0.002    31.714              
         T  <A  34   THR    > matches  <A 201   THR    >                        (  6.3 A from    O   SAH A1699  )
         K  <A  60   LYS    > matches  <A 204   LYS    >                        ( 11.3 A from    O   SAH A1699  )
         E  <A 124   GLU    > matches  <A 116   GLU    >                        ( 13.0 A from    C15 HMO A2000  )
 
KERBm  3*FOUND in 4trh  size =    3  ^    SIDC;                                                   #    1                            
  RMSD =     1.56 A
  TRANSFORM   -0.7518  0.0569 -0.6569  0.5019 -0.5967 -0.6262  0.4276  0.8005 -0.4200    45.855     8.379   -45.502              
         T  <A  34   THR    > matches  <A 364   THR    > 
         K  <A  60   LYS    > matches  <A 455   LYS    > 
         E  <A 124   GLU    > matches  <A 374   GLU    > 
 
KERBm  3*FOUND in 2xs1  size =    3  ^    PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN;            #    2                            
  RMSD =     1.57 A
  TRANSFORM    0.6058 -0.7719 -0.1927 -0.3913 -0.5000  0.7726  0.6928  0.3926  0.6049    13.300    -0.558    66.647              
         T  <A  34   THR    > matches  <A  12   THR    > 
         K  <A  60   LYS    > matches  <A  96   LYS    > 
         E  <A 124   GLU    > matches  <A  45   GLU    > 
 
KERBm  3*FOUND in 3nvz  size =    3  ^    XANTHINE DEHYDROGENASE/OXIDASE;                         #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.3612  0.9243  0.1232 -0.9144 -0.3251 -0.2412  0.1829  0.1998 -0.9626    32.786     0.706    51.839              
         T  <A  34   THR    > matches  <B 435   THR    >                        (  6.9 A from    O2  FAD B 606  )
         K  <A  60   LYS    > matches  <B 433   LYS    >                        (  4.7 A from    O4  FAD B 606  )
         E  <A 124   GLU    > matches  <B 416   GLU    >                        ( 22.6 A from    O2  FAD B 606  )
 
KERBm  3*FOUND in 4ddu  size =    3  ^    REVERSE GYRASE;                                         #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.5234  0.4976 -0.6917 -0.4386 -0.8533 -0.2821  0.7306 -0.1557 -0.6648    68.742    39.371   -28.274              
         T  <A  34   THR    > matches  <A 132   THR    >                        ( 56.0 A from   ZN    ZN A1202  )
         K  <A  60   LYS    > matches  <A 135   LYS    >                        ( 57.0 A from   ZN    ZN A1202  )
         E  <A 124   GLU    > matches  <A 344   GLU    >                        ( 62.3 A from   ZN    ZN A1201  )
 
KERBm  3*FOUND in 1wak  size =    3  ^    SERINE/THREONINE-PROTEIN KINASE SPRK1;                  #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.9319 -0.3261  0.1590  0.1420 -0.7312 -0.6672 -0.3339  0.5992 -0.7277    47.550    20.063    49.971              
         T  <A  34   THR    > matches  <A  93   THR    >                        ( 10.8 A from    O2  EDO A1656  )
         K  <A  60   LYS    > matches  <A 112   LYS    >                        ( 11.0 A from    O2  EDO A1656  )
         E  <A 124   GLU    > matches  <A 234   GLU    >                        ( 27.7 A from    O1  EDO A1656  )
 
KERBm  3*FOUND in 1p5d  size =    3  ^    PHOSPHOMANNOMUTASE;                                     #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.3594  0.6404 -0.6788 -0.8020 -0.1600 -0.5755  0.4772 -0.7512 -0.4561    53.446   -56.089    43.588              
         T  <A  34   THR    > matches  <X 106   THR    >                        (  3.3 A from    N   SEP X 108  )
         K  <A  60   LYS    > matches  <X 118   LYS    >                        (  2.6 A from    O2P SEP X 108  )
         E  <A 124   GLU    > matches  <X 205   GLU    >                        ( 18.0 A from    O   SEP X 108  )
 
KERBm  3*FOUND in 2aj4  size =    3  ^    GALACTOKINASE;                                          #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.6155 -0.6958  0.3702 -0.7838 -0.4913  0.3799  0.0824  0.5240  0.8477     2.078   -19.719   -12.222              
         T  <A  34   THR    > matches  <A 282   THR    >                        ( 13.5 A from    O4  GLA A 529  )
         K  <A  60   LYS    > matches  <A 307   LYS    >                        ( 15.5 A from    O4  GLA A 529  )
         E  <A 124   GLU    > matches  <A 347   GLU    >                        ( 21.8 A from    O6  GLA A 529  )
 
KERBm  3*FOUND in 4q2t  size =    3  ^    ARGININE--TRNA LIGASE, CYTOPLASMIC;                     #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.1693  0.0646 -0.9835  0.1332 -0.9872 -0.0878  0.9765  0.1459 -0.1585   249.960    57.459   -45.506              
         T  <A  34   THR    > matches  <A 311   THR    >                        ( 11.9 A from    NH2 ARG A 601  )
         K  <A  60   LYS    > matches  <A 305   LYS    >                        ( 15.3 A from    CA  ARG A 601  )
         E  <A 124   GLU    > matches  <A 326   GLU    >                        ( 15.3 A from    NH1 ARG A 601  )
 
KERBm  3*FOUND in 3ooq  size =    3  ^    AMIDOHYDROLASE;                                         #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.0751 -0.6962 -0.7139 -0.7437 -0.5160  0.4250  0.6642 -0.4990  0.5565   156.202    45.071    18.436              
         T  <A  34   THR    > matches  <A 113   THR    >                        ( 27.0 A from    O1  GOL A 500  )
         K  <A  60   LYS    > matches  <A 133   LYS    >                        ( 32.1 A from    O1  GOL A 500  )
         E  <A 124   GLU    > matches  <A 329   GLU    >                        ( 20.4 A from    C1  GOL A 500  )
 
KERBm  3*FOUND in 5kkp  size =    3  ^    PSEUDOURIDYLATE SYNTHASE 7;                             #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.7669  0.6232 -0.1533 -0.6305 -0.7762 -0.0015  0.1200 -0.0955 -0.9882    18.953    63.967    33.333              
         T  <A  34   THR    > matches  <A 346   THR    >                        ( 13.6 A from    UNK UNX A 704  )
         K  <A  60   LYS    > matches  <A 624   LYS    >                        ( 18.4 A from    UNK UNX A 704  )
         E  <A 124   GLU    > matches  <A 302   GLU    >                        ( 11.7 A from    UNK UNX A 703  )
 
KERBm  3*FOUND in 4j9j  size =    3  ^    IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF;     #    2                            
  RMSD =     1.57 A
  TRANSFORM   -0.7722 -0.3614  0.5227  0.6139 -0.6366  0.4668 -0.1640 -0.6813 -0.7134   -10.660   -32.366    60.580              
         T  <A  34   THR    > matches  <A  46   THR    > 
         K  <A  60   LYS    > matches  <A  51   LYS    > 
         E  <A 124   GLU    > matches  <A  65   GLU    > 
 
KERBm  3*FOUND in 3jym  size =    3  ^    FK506-BINDING PROTEIN (FKBP) FROM WHEAT;                #    2                            
  RMSD =     1.57 A
  TRANSFORM    0.3158  0.8966 -0.3104 -0.9339  0.3515  0.0652 -0.1676 -0.2693 -0.9484    10.642   -18.248    15.519              
         T  <A  34   THR    > matches  <A 301   THR    > 
         K  <A  60   LYS    > matches  <A 303   LYS    > 
         E  <A 124   GLU    > matches  <A 285   GLU    > 
 
KERBm  3*FOUND in 4rsi  size =    3  ^    STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2;        #    2                            
  RMSD =     1.57 A
  TRANSFORM    0.7769 -0.5684 -0.2710  0.4108  0.1313  0.9022  0.4772  0.8122 -0.3355    38.103  -105.611    15.295              
         T  <A  34   THR    > matches  <B 595   THR    >                        (104.9 A from    O4  PO4 A 801  )
         K  <A  60   LYS    > matches  <B 599   LYS    >                        (100.5 A from    O4  PO4 A 801  )
         E  <A 124   GLU    > matches  <B 583   GLU    >                        (124.6 A from    O4  PO4 A 801  )
 
KERBm  3*FOUND in 3tek  size =    3  ^    THERMODBP-SINGLE STRANDED DNA BINDING PROTEIN;          #    2                            
  RMSD =     1.57 A
  TRANSFORM    0.8332 -0.3131 -0.4559  0.3160 -0.4070  0.8570  0.4538  0.8581  0.2401    10.294    -0.541    26.055              
         T  <A  34   THR    > matches  <A  88   THR    > 
         K  <A  60   LYS    > matches  <A  84   LYS    > 
         E  <A 124   GLU    > matches  <A 103   GLU    > 
 
KERBm  3*FOUND in 3gxa  size =    3  ^    OUTER MEMBRANE LIPOPROTEIN GNA1946;                     #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.1546  0.9484 -0.2767  0.6973  0.0937  0.7107 -0.6999  0.3028  0.6468    -2.836    26.147    27.261              
         T  <A  34   THR    > matches  <A 116   THR    >                        ( 15.4 A from    O2  SO4 A   7  )
         K  <A  60   LYS    > matches  <A 108   LYS    >                        ( 14.2 A from    SD  MET A 296  )
         E  <A 124   GLU    > matches  <A 257   GLU    >                        ( 11.7 A from    O4  SO4 A   7  )
 
KERBm  3*FOUND in 5l8s  size =    3  ^    AMINO ACYL PEPTIDASE;                                   #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.6337  0.0601  0.7713  0.4749  0.8172  0.3265  0.6107 -0.5732  0.5464    15.723    47.259     5.724              
         T  <A  34   THR    > matches  <A 178   THR    >                        ( 36.0 A from    O1  SO4 A 701  )
         K  <A  60   LYS    > matches  <A 420   LYS    >                        ( 38.3 A from    O1  SO4 A 701  )
         E  <A 124   GLU    > matches  <A 125   GLU    >                        ( 48.9 A from    O1  SO4 A 701  )
 
KERBm  3*FOUND in 5ikl  size =    3  ^    GERANYL-COA CARBOXYLASE, BETA-SUBUNIT;                  #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.3274  0.6669 -0.6693 -0.4384 -0.7347 -0.5176  0.8370 -0.1240 -0.5329   150.868   177.142   147.146              
         T  <A  34   THR    > matches  <B 188   THR    > 
         K  <A  60   LYS    > matches  <B 209   LYS    > 
         E  <A 124   GLU    > matches  <B 161   GLU    > 
 
KERBm  3*FOUND in 5h6b  size =    3  ^    PUTATIVE SECRETED LIPASE;                               #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.7601  0.5833 -0.2864  0.4677  0.1850 -0.8643  0.4512  0.7909  0.4135    73.582   -20.262   -34.854              
         T  <A  34   THR    > matches  <A  98   THR    >                        ( 15.3 A from   ZN    ZN A 304  )
         K  <A  60   LYS    > matches  <A  23   LYS    >                        ( 19.9 A from   ZN    ZN A 304  )
         E  <A 124   GLU    > matches  <A  85   GLU    >                        (  5.8 A from   ZN    ZN A 304  )
 
KERBm  3*FOUND in 4kdr  size =    3  ^    3-DEMETHYLUBIQUINONE-9 3-METHYLTRANSFERASE;             #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.6943 -0.5452 -0.4698 -0.6669  0.7329  0.1349 -0.2707 -0.4069  0.8724     7.209   -15.024    24.220              
         T  <A  34   THR    > matches  <A  82   THR    >                        ( 12.7 A from    C2  SAH A 301  )
         K  <A  60   LYS    > matches  <A  59   LYS    >                        ( 17.6 A from    C2  SAH A 301  )
         E  <A 124   GLU    > matches  <A  21   GLU    >                        (  7.4 A from    O2' SAH A 301  )
 
KERBm  3*FOUND in 5g5g  size =    3  ^    PUTATIVE XANTHINE DEHYDROGENASE YAGT IRON-SULFUR-BI     #    2                            
  RMSD =     1.57 A
  TRANSFORM    0.7678 -0.5669  0.2985  0.1798  0.6378  0.7489  0.6149  0.5213 -0.5917  -270.069  -112.867    70.133              
         T  <A  34   THR    > matches  <C 720   THR    >                        (  6.1 A from    O1  GOL C1741  )
         K  <A  60   LYS    > matches  <C 723   LYS    >                        ( -2.7 A from    O1  GOL C1741s )
         E  <A 124   GLU    > matches  <A 201   GLU    >                        (  9.7 A from    O4  FAD B 321  )
 
KERBm  3*FOUND in 3imh  size =    3  ^    GALACTOSE-1-EPIMERASE;                                  #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.4006 -0.0323 -0.9157 -0.8627  0.3499  0.3651 -0.3086 -0.9362  0.1680    70.813    23.542    48.562              
         T  <A  34   THR    > matches  <A 322   THR    >                        ( 12.0 A from    O1  GOL A 345  )
         K  <A  60   LYS    > matches  <A 320   LYS    >                        ( 10.8 A from    O1  GOL A 345  )
         E  <A 124   GLU    > matches  <A 328   GLU    >                        ( 20.5 A from    C1  GOL A 345  )
 
KERBm  3*FOUND in 3ihp  size =    3  ^    UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5;                #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.4330 -0.5190  0.7370 -0.3707 -0.8478 -0.3793 -0.8216  0.1090  0.5595    40.095   -83.598    -7.220              
         T  <A  34   THR    > matches  <A 480   THR    >                        ( 49.1 A from   ZN    ZN A 836  )
         K  <A  60   LYS    > matches  <A 478   LYS    >                        ( 51.5 A from   ZN    ZN A 836  )
         E  <A 124   GLU    > matches  <A 448   GLU    >                        ( 42.5 A from   ZN    ZN A 836  )
 
KERBm  3*FOUND in 3ty4  size =    3  ^    PROBABLE HOMOISOCITRATE DEHYDROGENASE;                  #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.2636  0.9059  0.3314 -0.9307  0.1485  0.3343 -0.2537  0.3966 -0.8823    24.737    -3.391    35.956              
         T  <A  34   THR    > matches  <A 161   THR    >                        ( 22.9 A from    C3  GOL A 364  )
         K  <A  60   LYS    > matches  <A 165   LYS    >                        ( 21.6 A from    O3  GOL A 364  )
         E  <A 124   GLU    > matches  <A 136   GLU    >                        ( 25.4 A from    O1  GOL A 366  )
 
KERBm  3*FOUND in 4ph2  size =    3  ^    BLV CAPSID - N-TERMINAL DOMAIN;                         #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.0779  0.7613 -0.6437  0.9820  0.1701  0.0824 -0.1723  0.6257  0.7608    23.930   -31.458   -30.757              
         T  <A  34   THR    > matches  <A  50   THR    >                        (  7.8 A from    O3  GOL A 203  )
         K  <A  60   LYS    > matches  <A   1+  LYS    >                        ( 13.0 A from    O2  GOL A 203  )
         E  <A 124   GLU    > matches  <A  82   GLU    >                        (  7.0 A from    O4  SO4 A 201  )
 
KERBm  3*FOUND in 5d0o  size =    3  ^    OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA;            #    3                            
  RMSD =     1.57 A
  TRANSFORM   -0.1853 -0.9729 -0.1386 -0.0071 -0.1398  0.9902  0.9827 -0.1845 -0.0190    56.720    -5.372   -50.034              
         T  <A  34   THR    > matches  <A 667   THR    > 
         K  <A  60   LYS    > matches  <A 671   LYS    > 
         E  <A 124   GLU    > matches  <A 717   GLU    > 
 
KERBm  3*FOUND in 3vkw  size =    3  ^    REPLICASE LARGE SUBUNIT;                                #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.0391  0.1508 -0.9878 -0.9249  0.3797  0.0214 -0.3783 -0.9127 -0.1543     6.215    28.686    -8.008              
         T  <A  34   THR    > matches  <A 988   THR    >                        ( 11.2 A from    O4  SO4 A1201  )
         K  <A  60   LYS    > matches  <A1110   LYS    >                        ( 17.1 A from    O4  SO4 A1201  )
         E  <A 124   GLU    > matches  <A1045   GLU    >                        (  7.8 A from    O3  SO4 A1203  )
 
KERBm  3*FOUND in 2itm  size =    3  ^    XYLULOSE KINASE;                                        #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.1909  0.2075 -0.9594  0.5528  0.7849  0.2797 -0.8111  0.5838 -0.0351    82.725  -111.044     1.999              
         T  <A  34   THR    > matches  <A 128   THR    >                        ( 10.3 A from    O3  XUL A4930  )
         K  <A  60   LYS    > matches  <A 131   LYS    >                        (  8.9 A from    O4  XUL A4930  )
         E  <A 124   GLU    > matches  <A 204   GLU    >                        ( 13.1 A from    O1  SO4 A4931  )
 
KERBm  3*FOUND in 5kpg  size =    3  ^    PAVINE N-METHYLTRANSFERASE;                             #    4                            
  RMSD =     1.57 A
  TRANSFORM    0.2582 -0.3843 -0.8864 -0.7671 -0.6393  0.0537  0.5873 -0.6660  0.4598    38.006     8.671    54.009              
         T  <A  34   THR    > matches  <A 259   THR    >                        ( 14.8 A from    N7  SAH A 401  )
         K  <A  60   LYS    > matches  <A 208   LYS    >                        ( 12.8 A from    N6  SAH A 401  )
         E  <A 124   GLU    > matches  <A   9   GLU    >                        ( 28.6 A from    O2' SAH A 401  )
 
KERBm  3*FOUND in 2g8c  size =    3  ^    OUTER SURFACE PROTEIN A;                                #    2                            
  RMSD =     1.57 A
  TRANSFORM   -0.0801  0.1039  0.9914  0.9684 -0.2274  0.1021 -0.2361 -0.9682  0.0824     1.266     4.446    17.635              
         T  <A  34   THR    > matches  <O 224   THR    >                        ( 25.0 A from    C4  IMD O 700  )
         K  <A  60   LYS    > matches  <O 231   LYS    >                        ( 29.0 A from    C5  IMD O 700  )
         E  <A 124   GLU    > matches  <O 160   GLU    >                        (  8.5 A from    N3  IMD O 700  )
 
KERBm  3*FOUND in 2c4m  size =    3  ^    GLYCOGEN PHOSPHORYLASE;                                 #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.2291  0.5603  0.7960  0.2664 -0.8226  0.5023 -0.9362 -0.0970  0.3377   -99.949    30.438   -67.357              
         T  <A  34   THR    > matches  <A 630   THR    >                        ( -3.9 A from    O1  FMT A1799s )
         K  <A  60   LYS    > matches  <A 634   LYS    >                        ( -1.2 A from    C4A PLP A1634s )
         E  <A 124   GLU    > matches  <A 339   GLU    >                        ( 13.5 A from    O4  PO4 A1794  )
 
KERBm  3*FOUND in 4hb9  size =    3  ^    SIMILARITIES WITH PROBABLE MONOOXYGENASE;               #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.2872 -0.9010  0.3251  0.9540  0.2995 -0.0129  0.0857 -0.3138 -0.9456    25.970   -44.092    49.156              
         T  <A  34   THR    > matches  <A  13   THR    >                        (  7.1 A from    O1  EDO A 511  )
         K  <A  60   LYS    > matches  <A 114   LYS    >                        ( -3.3 A from    O1  EDO A 511s )
         E  <A 124   GLU    > matches  <A 362   GLU    >                        (  7.4 A from    O1  EDO A 509  )
 
KERBm  3*FOUND in 4pac  size =    3  ^    HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 2;         #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.7571  0.1513  0.6355 -0.5041 -0.7541 -0.4210 -0.4155  0.6391 -0.6472    31.792    19.676    29.850              
         T  <A  34   THR    > matches  <A  74   THR    >                        ( 16.4 A from    C6  MES A 301  )
         K  <A  60   LYS    > matches  <A  78   LYS    >                        ( 21.1 A from    C6  MES A 301  )
         E  <A 124   GLU    > matches  <A 169   GLU    >                        ( 15.5 A from    C2  MES A 301  )
 
KERBm  3*FOUND in 1qwo  size =    3  ^    PHYTASE;                                                #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.8945 -0.4141  0.1682 -0.1084 -0.1642 -0.9805 -0.4336  0.8953 -0.1020    16.881    47.526    39.722              
         T  <A  34   THR    > matches  <A  65   THR    >                        (  7.2 A from    O1P NEP A  59  )
         K  <A  60   LYS    > matches  <A  68   LYS    >                        (  9.5 A from    O1P NEP A  59  )
         E  <A 124   GLU    > matches  <A 148   GLU    >                        ( 11.8 A from    CB  NEP A  59  )
 
KERBm  3*FOUND in 2p5v  size =    3  ^    TRANSCRIPTIONAL REGULATOR, LRP/ASNC FAMILY;             #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.1598 -0.6898 -0.7061 -0.7409 -0.5565  0.3760  0.6524 -0.4631  0.6000    81.538   -26.092   -34.688              
         T  <A  34   THR    > matches  <A 149   THR    >                        ( 19.2 A from    C1  GOL A 904  )
         K  <A  60   LYS    > matches  <A 147   LYS    >                        ( 20.6 A from    C1  GOL A 904  )
         E  <A 124   GLU    > matches  <A  27   GLU    >                        ( 26.5 A from    O1  GOL A 904  )
 
KERBm  3*FOUND in 3mzk  size =    3  ^    PROTEIN TRANSPORT PROTEIN SEC13;                        #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.2312 -0.8904 -0.3921  0.5032  0.2354 -0.8315 -0.8327  0.3895 -0.3936   -14.106   -58.356    44.673              
         T  <A  34   THR    > matches  <B1060   THR    > 
         K  <A  60   LYS    > matches  <B1056   LYS    > 
         E  <A 124   GLU    > matches  <B1072   GLU    > 
 
KERBm  3*FOUND in 5b3y  size =    3  ^    PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTIN     #    1                            
  RMSD =     1.57 A
  TRANSFORM    0.8785  0.4647 -0.1103  0.3142 -0.3884  0.8663 -0.3598  0.7957  0.4872    -9.841   -50.565   -24.386              
         T  <A  34   THR    > matches  <A  59   THR    >                        ( 21.1 A from    O1' MAL A 401  )
         K  <A  60   LYS    > matches  <A  57   LYS    >                        ( 26.0 A from    O1' MAL A 401  )
         E  <A 124   GLU    > matches  <A  67   GLU    >                        (  5.6 A from    O4  MAL A 401  )
 
KERBm  3*FOUND in 4k36  size =    3  ^    ANAEROBIC SULFATASE-MATURATING ENZYME;                  #    1                            
  RMSD =     1.57 A
  TRANSFORM   -0.8429 -0.5337  0.0692 -0.0880  0.0098 -0.9961 -0.5309  0.8456  0.0552    45.612    40.537     4.231              
         T  <A  34   THR    > matches  <A 102   THR    >                        (  6.7 A from    S1  SF4 A 503  )
         K  <A  60   LYS    > matches  <A 145   LYS    >                        ( 12.3 A from    S1  SF4 A 503  )
         E  <A 124   GLU    > matches  <A 268   GLU    >                        ( 11.0 A from    CG  SAM A 504  )
 
KERBm  3*FOUND in 5w1o  size =    3  ^    MAJOR CAPSID PROTEIN L1;                                #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.6967  0.1185 -0.7075  0.6582 -0.2866 -0.6961  0.2852  0.9507 -0.1217    65.677     4.281    37.065              
         T  <A  34   THR    > matches  <A 154   THR    >                        ( 35.0 A from    O7  JHM A 502  )
         K  <A  60   LYS    > matches  <A 152   LYS    >                        ( 31.1 A from    O7  JHM A 502  )
         E  <A 124   GLU    > matches  <A 106   GLU    >                        ( 44.6 A from    O7  JHM A 501  )
 
KERBm  3*FOUND in 3i6d  size =    3  ^    PROTOPORPHYRINOGEN OXIDASE;                             #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.0528  0.9363  0.3471  0.7331  0.2724 -0.6232  0.6781 -0.2215  0.7008    37.779    -5.090    12.919              
         T  <A  34   THR    > matches  <A 346   THR    >                        (  9.2 A from    O5  ACJ A 471  )
         K  <A  60   LYS    > matches  <A 351   LYS    >                        (  8.2 A from    O4  FAD A 600  )
         E  <A 124   GLU    > matches  <A 389   GLU    >                        ( 24.4 A from    C7M FAD A 600  )
 
KERBm  3*FOUND in 3o8m  size =    3  ^    HEXOKINASE;                                             #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.3386 -0.9340 -0.1141 -0.9195  0.3542 -0.1706 -0.1997 -0.0472  0.9787    75.128     8.453    18.699              
         T  <A  34   THR    > matches  <A 233   THR    >                        (  6.5 A from    O6 AGLC A 486  )
         K  <A  60   LYS    > matches  <A 175   LYS    >                        (  2.9 A from    O6 BBGC A 487s )
         E  <A 124   GLU    > matches  <A 428   GLU    >                        ( 21.2 A from    C6 AGLC A 486  )
 
KERBm  3*FOUND in 3gve  size =    3  ^    YFKN PROTEIN;                                           #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.0829  0.8144  0.5744 -0.3289 -0.5664  0.7556 -0.9407  0.1263 -0.3148   -34.725     3.153    28.898              
         T  <A  34   THR    > matches  <A 196   THR    >                        ( 20.4 A from   MG    MG A 403  )
         K  <A  60   LYS    > matches  <A 199   LYS    >                        ( 25.4 A from   MG    MG A 403  )
         E  <A 124   GLU    > matches  <A 107   GLU    >                        (  7.9 A from   MG    MG A 403  )
 
KERBm  3*FOUND in 2wgh  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE              #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.6015  0.7761  0.1892 -0.7463  0.6304 -0.2135  0.2850  0.0128 -0.9584   -13.101    32.860    42.348              
         T  <A  34   THR    > matches  <A 400   THR    >                        ( 23.6 A from    O1  GOL A1743  )
         K  <A  60   LYS    > matches  <A 316   LYS    >                        ( 23.4 A from    O3' DTP A1745  )
         E  <A 124   GLU    > matches  <A 431   GLU    >                        (  7.8 A from    C3  GOL A1743  )
 
KERBm  3*FOUND in 2foj  size =    3  ^    UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7;                #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.1170 -0.9093  0.3993  0.8202  0.1382  0.5551  0.5600 -0.3925 -0.7297    23.874   -16.129   -20.169              
         T  <A  34   THR    > matches  <A  74   THR    > 
         K  <A  60   LYS    > matches  <A 188   LYS    > 
         E  <A 124   GLU    > matches  <A 124   GLU    > 
 
KERBm  3*FOUND in 1a0i  size =    3  ^    DNA LIGASE;                                             #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.1113  0.0542 -0.9923 -0.6955  0.7175 -0.0388 -0.7099 -0.6945 -0.1176    58.329    30.140     9.982              
         T  <A  34   THR    > matches  <A 292   THR    >                        ( 30.3 A from    O2B ATP A   1  )
         K  <A  60   LYS    > matches  <A 296   LYS    >                        ( 35.4 A from    N7  ATP A   1  )
         E  <A 124   GLU    > matches  <A 217   GLU    >                        ( 12.8 A from    O2B ATP A   1  )
 
KERBm  3*FOUND in 5k1a  size =    3  ^    UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12;               #    2                            
  RMSD =     1.58 A
  TRANSFORM   -0.1327 -0.3926  0.9101  0.8193 -0.5602 -0.1222 -0.5578 -0.7294 -0.3960   -73.920   -30.221    26.802              
         T  <A  34   THR    > matches  <B 430   THR    >                        ( 18.2 A from   ZN    ZN A 401  )
         K  <A  60   LYS    > matches  <B 425   LYS    >                        ( 15.0 A from   ZN    ZN A 401  )
         E  <A 124   GLU    > matches  <B 472   GLU    >                        ( 38.8 A from   ZN    ZN A 401  )
 
KERBm  3*FOUND in 1w6s  size =    3  ^    METHANOL DEHYDROGENASE SUBUNIT 1;                       #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.2343 -0.0858  0.9684  0.9628  0.1179  0.2433  0.1350 -0.9893 -0.0550    31.266    -0.260    54.770              
         T  <A  34   THR    > matches  <A 354   THR    >                        ( 19.8 A from    O4  PQQ A1596  )
         K  <A  60   LYS    > matches  <A 443   LYS    >                        ( 22.8 A from    O4  PQQ A1596  )
         E  <A 124   GLU    > matches  <A 301   GLU    >                        ( 17.1 A from   CA    CA A1599  )
 
KERBm  3*FOUND in 1fs9  size =    3  ^    CYTOCHROME C NITRITE REDUCTASE;                         #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.0622  0.5957  0.8008  0.9769  0.1278 -0.1710  0.2042 -0.7930  0.5740   -32.238   -39.141    36.873              
         T  <A  34   THR    > matches  <A  67   THR    >                        (  7.0 A from    O2A HEM A 510  )
         K  <A  60   LYS    > matches  <A 314   LYS    >                        (  6.4 A from    O2A HEM A 510  )
         E  <A 124   GLU    > matches  <A 474   GLU    >                        ( 12.6 A from    CMA HEM A 508  )
 
KERBm  3*FOUND in 5c46  size =    3  ^    PHOSPHATIDYLINOSITOL 4-KINASE BETA;                     #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.6089  0.7577 -0.2347  0.7820 -0.6230  0.0173  0.1331  0.1941  0.9719    29.493     7.678    50.409              
         T  <A  34   THR    > matches  <E 356   THR    >                        ( 26.1 A from    O1  SO4 E 802  )
         K  <A  60   LYS    > matches  <E 584   LYS    >                        ( 28.1 A from    O1  SO4 E 802  )
         E  <A 124   GLU    > matches  <E 312   GLU    >                        ( 24.5 A from    O1  SO4 E 802  )
 
KERBm  3*FOUND in 3a1c  size =    3  ^    PROBABLE COPPER-EXPORTING P-TYPE ATPASE A;              #    3                            
  RMSD =     1.58 A
  TRANSFORM    0.5731  0.6694  0.4727  0.4020  0.2731 -0.8740  0.7141 -0.6909  0.1126   -55.856    -8.292   -23.687              
         T  <A  34   THR    > matches  <A 572   THR    >                        ( -3.7 A from    O2G ACP A 997s )
         K  <A  60   LYS    > matches  <A 600   LYS    >                        (  2.6 A from    O3G ACP A 997s )
         E  <A 124   GLU    > matches  <A 527   GLU    >                        ( 16.4 A from    O3' ACP A 997  )
 
KERBm  3*FOUND in 2vdw  size =    3  ^    VACCINIA VIRUS CAPPING ENZYME D1 SUBUNIT;               #    3                            
  RMSD =     1.58 A
  TRANSFORM   -0.5773  0.0135 -0.8164  0.3327  0.9170 -0.2201 -0.7457  0.3987  0.5339    43.551    10.083    11.958              
         T  <A  34   THR    > matches  <A 557   THR    >                        (  9.9 A from    O1  SO4 A1845  )
         K  <A  60   LYS    > matches  <A 559   LYS    >                        ( 15.2 A from    O1  SO4 A1845  )
         E  <A 124   GLU    > matches  <A 742   GLU    >                        ( 17.9 A from    C2  SAH A1846  )
 
KERBm  3*FOUND in 2h8o  size =    3  ^    GERANYLTRANSTRANSFERASE;                                #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.1105 -0.9425  0.3156 -0.2972 -0.2716 -0.9154 -0.9484  0.1949  0.2501    47.057    35.554    80.631              
         T  <A  34   THR    > matches  <A 288   THR    > 
         K  <A  60   LYS    > matches  <A 286   LYS    > 
         E  <A 124   GLU    > matches  <A 308   GLU    > 
 
KERBm  3*FOUND in 2brf  size =    3  ^    BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE;         #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.4770 -0.3816 -0.7917 -0.0255 -0.9064  0.4215  0.8786  0.1808  0.4421    14.911    13.387     0.476              
         T  <A  34   THR    > matches  <A  74   THR    >                        ( 18.6 A from    O3  SO4 A1110  )
         K  <A  60   LYS    > matches  <A  77+  LYS    >                        ( 20.0 A from    O3  SO4 A1110  )
         E  <A 124   GLU    > matches  <A  58   GLU    >                        ( 33.3 A from    O2  SO4 A1110  )
 
KERBm  3*FOUND in 3owa  size =    3  ^    ACYL-COA DEHYDROGENASE;                                 #    2                            
  RMSD =     1.58 A
  TRANSFORM   -0.6380  0.7480 -0.1829 -0.7288 -0.5099  0.4570 -0.2486 -0.4249 -0.8705    25.387   -29.303    40.954              
         T  <A  34   THR    > matches  <A 164   THR    >                        ( 11.5 A from    O2  FAD A 601  )
         K  <A  60   LYS    > matches  <A 181   LYS    >                        (  7.5 A from    O2  FAD A 601  )
         E  <A 124   GLU    > matches  <A 171   GLU    >                        ( 29.4 A from    O2  FAD A 601  )
 
KERBm  3*FOUND in 4i4t  size =    3  ^    TUBULIN ALPHA-1B CHAIN;                                 #    2                            
  RMSD =     1.58 A
  TRANSFORM   -0.5909 -0.3723  0.7157  0.3225  0.7042  0.6325  0.7395 -0.6045  0.2961     0.171   -91.496    33.976              
         T  <A  34   THR    > matches  <F   3   THR    >                        ( 25.0 A from   HO3' GTP A 501  )
         K  <A  60   LYS    > matches  <F  28   LYS    >                        ( 28.2 A from   HO3' GTP A 501  )
         E  <A 124   GLU    > matches  <A 207   GLU    >                        ( 11.9 A from   HO3' GTP A 501  )
 
KERBm  3*FOUND in 2wqd  size =    3  ^    PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE;         #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.9136 -0.0576  0.4024 -0.3805  0.2273  0.8964  0.1431  0.9721 -0.1857    50.842   -12.517    19.777              
         T  <A  34   THR    > matches  <A 530   THR    >                        ( 30.4 A from   CA    CA A1572  )
         K  <A  60   LYS    > matches  <A 534   LYS    >                        ( 31.8 A from   CA    CA A1572  )
         E  <A 124   GLU    > matches  <A 127   GLU    >                        ( 25.9 A from   CA    CA A1572  )
 
KERBm  3*FOUND in 2du3  size =    3  ^    TRNA;                                                   #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.2873  0.0879 -0.9538 -0.6999 -0.6605 -0.2718  0.6538 -0.7457  0.1282     0.083    18.642     6.816              
         T  <A  34   THR    > matches  <A 387   THR    >                        ( 57.3 A from    O1P SEP A1002  )
         K  <A  60   LYS    > matches  <A 390   LYS    >                        ( 59.8 A from    O1P SEP A1002  )
         E  <A 124   GLU    > matches  <A 534   GLU    >                        ( 64.0 A from    O1P SEP A1002  )
 
KERBm  3*FOUND in 5tw1  size =    3  ^    RNA POLYMERASE-BINDING PROTEIN RBPA;                    #    2                            
  RMSD =     1.58 A
  TRANSFORM   -0.8669  0.4876 -0.1040  0.0138  0.2319  0.9726 -0.4983 -0.8417  0.2078   -94.288   -96.541    -4.868              
         T  <A  34   THR    > matches  <C 803   THR    >                        ( 30.5 A from    H11 EDO C1205  )
         K  <A  60   LYS    > matches  <C 800   LYS    >                        ( 25.3 A from    H11 EDO C1205  )
         E  <A 124   GLU    > matches  <F 429   GLU    >                        ( 19.7 A from    H21 EDO F 506  )
 
KERBm  3*FOUND in 4hdr  size =    3  ^    ARSA;                                                   #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.5444  0.7549 -0.3656 -0.6994 -0.6492 -0.2989  0.4630 -0.0930 -0.8814    61.306     1.864    74.541              
         T  <A  34   THR    > matches  <A   7   THR    >                        ( 27.4 A from    C1  EDO A 802  )
         K  <A  60   LYS    > matches  <A  10   LYS    >                        ( 30.7 A from    C1  EDO B 401  )
         E  <A 124   GLU    > matches  <A 244   GLU    >                        (  8.4 A from    C1  EDO A 802  )
 
KERBm  3*FOUND in 2uzx  size =    3  ^    INTERNALIN B;                                           #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.3841  0.5535  0.7390 -0.3215  0.6701 -0.6690  0.8655  0.4945  0.0794    63.702    32.847    12.874              
         T  <A  34   THR    > matches  <B  50   THR    > 
         K  <A  60   LYS    > matches  <B 508   LYS    > 
         E  <A 124   GLU    > matches  <B  91   GLU    > 
 
KERBm  3*FOUND in 1q50  size =    3  ^    GLUCOSE-6-PHOSPHATE ISOMERASE;                          #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.0258 -0.4730 -0.8807  0.6384  0.6857 -0.3495 -0.7692  0.5533 -0.3197   156.862    17.304    49.913              
         T  <A  34   THR    > matches  <A 417   THR    > 
         K  <A  60   LYS    > matches  <A 419   LYS    > 
         E  <A 124   GLU    > matches  <A 386   GLU    > 
 
KERBm  3*FOUND in 1iuq  size =    3  ^    GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE;                   #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.4103 -0.1077 -0.9056 -0.2223 -0.9512  0.2138  0.8845 -0.2890 -0.3663    50.338    -9.866    22.346              
         T  <A  34   THR    > matches  <A 210   THR    >                        ( 17.9 A from    O3  SO4 A2001  )
         K  <A  60   LYS    > matches  <A 214   LYS    >                        ( 18.2 A from    O1  SO4 A2001  )
         E  <A 124   GLU    > matches  <A 200   GLU    >                        ( 15.5 A from    O1  GOL A1005  )
 
KERBm  3*FOUND in 1qo7  size =    3  ^    EPOXIDE HYDROLASE;                                      #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.4847 -0.7656 -0.4230  0.8295  0.2488  0.5001  0.2776  0.5933 -0.7556    55.417   -59.518    60.152              
         T  <A  34   THR    > matches  <A  63   THR    > 
         K  <A  60   LYS    > matches  <A  67   LYS    > 
         E  <A 124   GLU    > matches  <A  46   GLU    > 
 
KERBm  3*FOUND in 6fhn  size =    3  ^    PROTEIN;                                                #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.2185 -0.2405 -0.9457 -0.9451 -0.1892  0.2664  0.2430 -0.9520  0.1860    44.074    88.764    24.748              
         T  <A  34   THR    > matches  <A 529   THR    >                        (  9.0 A from    S   SCN A3005  )
         K  <A  60   LYS    > matches  <A 720   LYS    >                        ( 13.3 A from    S   SCN A3005  )
         E  <A 124   GLU    > matches  <A 424   GLU    >                        ( -2.7 A from    O1  B3P A3003s )
 
KERBm  3*FOUND in 4qan  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.5272  0.4553  0.7175  0.4909 -0.5260  0.6945 -0.6936 -0.7184 -0.0538     0.307   -38.865    86.283              
         T  <A  34   THR    > matches  <A 307   THR    > 
         K  <A  60   LYS    > matches  <A 326   LYS    > 
         E  <A 124   GLU    > matches  <A 292   GLU    > 
 
KERBm  3*FOUND in 5ch5  size =    3  ^    CARBOXYLIC ESTER HYDROLASE;                             #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.6782 -0.6727 -0.2959 -0.0145 -0.4148  0.9098  0.7348  0.6127  0.2911     7.475    32.521     5.810              
         T  <A  34   THR    > matches  <A 501   THR    >                        ( 20.1 A from    C2  DPF A 601  )
         K  <A  60   LYS    > matches  <A 156   LYS    >                        ( 26.2 A from    C2  DPF A 601  )
         E  <A 124   GLU    > matches  <A 351   GLU    >                        (  8.3 A from    C1  DPF A 601  )
 
KERBm  3*FOUND in 4cyf  size =    3  ^    PANTETHEINASE;                                          #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.3269  0.9034  0.2773  0.8184 -0.1239 -0.5611  0.4725 -0.4104  0.7799  -305.910   -69.822    58.460              
         T  <A  34   THR    > matches  <A 210   THR    >                        (  3.9 A from    N   CSO A 211  )
         K  <A  60   LYS    > matches  <A 212+  LYS    >                        (  2.9 A from    O   CSO A 211  )
         E  <A 124   GLU    > matches  <A  97   GLU    >                        ( 13.4 A from    C8  NAG A 601  )
 
KERBm  3*FOUND in 2hi0  size =    3  ^    PUTATIVE PHOSPHOGLYCOLATE PHOSPHATASE;                  #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.8803  0.3314 -0.3394 -0.4740  0.6414 -0.6033 -0.0177 -0.6919 -0.7217    36.032    18.592    49.803              
         T  <A  34   THR    > matches  <A 228   THR    >                        ( -4.7 A from    O2  EDO A 246s )
         K  <A  60   LYS    > matches  <A 231   LYS    >                        (  8.3 A from    O2  EDO A 248  )
         E  <A 124   GLU    > matches  <A  41   GLU    >                        (  7.4 A from    OXT ACT A 244  )
 
KERBm  3*FOUND in 5isu  size =    3  ^    LMO0135 PROTEIN;                                        #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.5397  0.7341 -0.4121 -0.4733 -0.6694 -0.5726  0.6962  0.1140 -0.7088    26.845    25.518    13.435              
         T  <A  34   THR    > matches  <A 336   THR    >                        ( 42.1 A from    C2  EDO A 601  )
         K  <A  60   LYS    > matches  <A 338   LYS    >                        ( 47.0 A from    C2  EDO A 601  )
         E  <A 124   GLU    > matches  <A 167   GLU    >                        ( 24.8 A from    C2  EDO A 601  )
 
KERBm  3*FOUND in 1fnn  size =    3  ^    CELL DIVISION CONTROL PROTEIN 6;                        #    1                            
  RMSD =     1.58 A
  TRANSFORM    0.9068  0.3176  0.2770  0.3969 -0.8646 -0.3080 -0.1417 -0.3893  0.9102    18.591   -13.569     1.485              
         T  <A  34   THR    > matches  <A 309   THR    >                        ( 31.5 A from    N1  ADP A 398  )
         K  <A  60   LYS    > matches  <A 362+  LYS    >                        ( 28.2 A from    N6  ADP A 398  )
         E  <A 124   GLU    > matches  <A 323   GLU    >                        ( 42.4 A from    O4' ADP A 398  )
 
KERBm  3*FOUND in 2c5s  size =    3  ^    PROBABLE THIAMINE BIOSYNTHESIS PROTEIN THII;            #    2                            
  RMSD =     1.58 A
  TRANSFORM    0.7491 -0.6182  0.2382 -0.5783 -0.4348  0.6903  0.3231  0.6548  0.6832     3.431   -35.153   -86.186              
         T  <A  34   THR    > matches  <A  26   THR    >                        ( 24.8 A from    O2' AMP A1392  )
         K  <A  60   LYS    > matches  <A  22   LYS    >                        ( 25.0 A from    O2' AMP A1392  )
         E  <A 124   GLU    > matches  <A 391   GLU    >                        ( 28.9 A from    O2' AMP A1392  )
 
KERBm  3*FOUND in 4mew  size =    3  ^    SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY      #    2                            
  RMSD =     1.58 A
  TRANSFORM   -0.5343  0.7633  0.3632  0.4814  0.6279 -0.6116  0.6948  0.1519  0.7029     1.569   -16.919   -27.052              
         T  <A  34   THR    > matches  <A 454   THR    >                        ( 10.3 A from   CA    CA A 501  )
         K  <A  60   LYS    > matches  <A 452   LYS    >                        (  9.3 A from   CA    CA A 501  )
         E  <A 124   GLU    > matches  <A 285   GLU    >                        (  8.0 A from    O1  GOL A 503  )
 
KERBm  3*FOUND in 4yfu  size =    3  ^    DNA POLYMERASE;                                         #    2                            
  RMSD =     1.58 A
  TRANSFORM    0.4970  0.1092 -0.8609 -0.3822  0.9182 -0.1042 -0.7791 -0.3808 -0.4980    19.830    79.548   122.536              
         T  <A  34   THR    > matches  <A 497   THR    >                        ( 22.3 A from    O6  SUC A 902  )
         K  <A  60   LYS    > matches  <A 600   LYS    >                        ( 22.6 A from    O6  SUC A 902  )
         E  <A 124   GLU    > matches  <A 509   GLU    >                        ( 32.1 A from    O1A TTP A 901  )
 
KERBm  3*FOUND in 5gzt  size =    3  ^    CHITINASE;                                              #    1                            
  RMSD =     1.58 A
  TRANSFORM   -0.9529 -0.0911  0.2894 -0.0958 -0.8149 -0.5717 -0.2879  0.5725 -0.7677    64.822    -4.038   -24.973              
         T  <A  34   THR    > matches  <B 634   THR    >                        ( 24.1 A from    O1  FMT B4005  )
         K  <A  60   LYS    > matches  <B 637   LYS    >                        ( 19.7 A from    C   FMT B4005  )
         E  <A 124   GLU    > matches  <B 603   GLU    >                        ( 30.1 A from    O1  FMT B4005  )
 
KERBm  3*FOUND in 2xvl  size =    3  ^    ALPHA-XYLOSIDASE, PUTATIVE, XYL31A;                     #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.4800 -0.2588 -0.8382 -0.8327  0.1663 -0.5282 -0.2761 -0.9515  0.1356    48.641    42.883   113.696              
         T  <A  34   THR    > matches  <A 399   THR    >                        (  7.9 A from    O2  SO4 A1994  )
         K  <A  60   LYS    > matches  <A 401   LYS    >                        ( -3.6 A from    O2  SO4 A1994s )
         E  <A 124   GLU    > matches  <A 585   GLU    >                        (  7.7 A from    OAS PXN A2001  )
 
KERBm  3*FOUND in 4f92  size =    3  ^    U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASE     #    2                            
  RMSD =     1.59 A
  TRANSFORM    0.2794 -0.5505 -0.7867  0.6524  0.7100 -0.2651 -0.7045  0.4392 -0.5575    14.449    -8.892   -12.536              
         T  <A  34   THR    > matches  <B 570   THR    >                        ( 22.4 A from    N1 BSAN B2201  )
         K  <A  60   LYS    > matches  <B 592   LYS    >                        ( 15.2 A from    N1 BSAN B2201  )
         E  <A 124   GLU    > matches  <B 798   GLU    >                        ( 38.9 A from    N1 BSAN B2201  )
 
KERBm  3*FOUND in 3vqi  size =    3  ^    ATG5;                                                   #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.0425 -0.3354  0.9411  0.9519  0.2996  0.0637  0.3034 -0.8932 -0.3320   -25.917   -44.948    19.323              
         T  <A  34   THR    > matches  <A  51   THR    >                        ( 10.3 A from    O3  SO4 A 302  )
         K  <A  60   LYS    > matches  <A  55   LYS    >                        ( -5.0 A from    O3  SO4 A 302s )
         E  <A 124   GLU    > matches  <A  83   GLU    >                        ( -6.1 A from    C3  EPE A 301s )
 
KERBm  3*FOUND in 4xqk  size =    3  ^    LLABIII;                                                #    3                            
  RMSD =     1.59 A
  TRANSFORM    0.2121 -0.9734  0.0862 -0.4135 -0.0095  0.9104  0.8854  0.2287  0.4046    65.333   -30.902    -6.572              
         T  <A  34   THR    > matches  <A 286   THR    >                        ( 51.7 A from    K     K A1601  )
         K  <A  60   LYS    > matches  <A 291   LYS    >                        ( 53.8 A from    K     K A1601  )
         E  <A 124   GLU    > matches  <A 568   GLU    >                        ( 34.6 A from    K     K A1601  )
 
KERBm  3*FOUND in 3sxx  size =    3  ^    PEROXISOMAL PRIMARY AMINE OXIDASE;                      #    3                            
  RMSD =     1.59 A
  TRANSFORM   -0.0379  0.4300 -0.9020  0.8510 -0.4593 -0.2547  0.5238  0.7773  0.3485    45.158    28.192   -16.194              
         T  <A  34   THR    > matches  <A 198   THR    >                        ( 20.4 A from    C3  GOL A 810  )
         K  <A  60   LYS    > matches  <A 201   LYS    >                        ( 23.8 A from    O3  GOL A 809  )
         E  <A 124   GLU    > matches  <A 300   GLU    >                        ( 15.1 A from    O3  GOL A 809  )
 
KERBm  3*FOUND in 3k8t  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN 1;     #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.5265  0.8399 -0.1315  0.6775  0.5080  0.5320 -0.5136 -0.1910  0.8365    -8.629   -43.323    34.447              
         T  <A  34   THR    > matches  <A 399   THR    >                        ( 17.1 A from    N6  2A5 A 891  )
         K  <A  60   LYS    > matches  <A 316   LYS    >                        ( 23.8 A from    N2  DGT A 890  )
         E  <A 124   GLU    > matches  <A 622   GLU    >                        ( 10.0 A from    O1A 2A5 A 891  )
 
KERBm  3*FOUND in 4jg6  size =    3  ^    RIBOSOMAL PROTEIN S6 KINASE ALPHA-3;                    #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.9974 -0.0109  0.0718  0.0045  0.9775  0.2108  0.0725 -0.2106  0.9749    42.367    17.649     0.919              
         T  <A  34   THR    > matches  <A 478   THR    >                        ( -3.4 A from   NA    NA A 802s )
         K  <A  60   LYS    > matches  <A 480   LYS    >                        (  8.0 A from   NA    NA A 802  )
         E  <A 124   GLU    > matches  <A 528   GLU    >                        ( 17.2 A from   NA    NA A 802  )
 
KERBm  3*FOUND in 1bxe  size =    3  ^    PROTEIN (RIBOSOMAL PROTEIN L22);                        #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.0384 -0.9574  0.2861 -0.4384 -0.2411 -0.8658 -0.8979  0.1587  0.4105    36.244    39.834    35.078              
         T  <A  34   THR    > matches  <A  39   THR    >                        ( 15.4 A from   CL    CL A 901  )
         K  <A  60   LYS    > matches  <A  41   LYS    >                        ( 14.4 A from   CL    CL A 901  )
         E  <A 124   GLU    > matches  <A  66   GLU    >                        (-24.4 A from   CL    CL A 901s )
 
KERBm  3*FOUND in 4igb  size =    3  ^    LPXTG CELL WALL SURFACE PROTEIN;                        #    3                            
  RMSD =     1.59 A
  TRANSFORM    0.0207  0.9956  0.0917 -0.4863  0.0902 -0.8691  0.8736  0.0266 -0.4860     1.777    15.593     3.847              
         T  <A  34   THR    > matches  <A 396   THR    >                        ( 17.2 A from    O2  GOL A 503  )
         K  <A  60   LYS    > matches  <A 398   LYS    >                        ( 19.8 A from    C2  GOL A 503  )
         E  <A 124   GLU    > matches  <A 364   GLU    >                        ( 29.1 A from    O2  GOL A 503  )
 
KERBm  3*FOUND in 2dv6  size =    3  ^    NITRITE REDUCTASE;                                      #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.6353  0.3242  0.7009  0.5907 -0.3807  0.7115 -0.4975 -0.8660 -0.0504    27.441    -8.434    99.689              
         T  <A  34   THR    > matches  <A 307   THR    >                        ( 24.6 A from   CU    CU A 502  )
         K  <A  60   LYS    > matches  <A 303   LYS    >                        ( 25.0 A from   CU    CU A 500  )
         E  <A 124   GLU    > matches  <A  63   GLU    >                        ( 26.1 A from   CU    CU A 502  )
 
KERBm  3*FOUND in 3nvw  size =    3  ^    XANTHINE DEHYDROGENASE/OXIDASE;                         #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.3628  0.9235  0.1247 -0.9142 -0.3269 -0.2394  0.1803  0.2009 -0.9629    32.638     0.649    51.713              
         T  <A  34   THR    > matches  <B 435   THR    >                        (  6.8 A from    O2  FAD B 606  )
         K  <A  60   LYS    > matches  <B 433   LYS    >                        (  4.6 A from    O4  FAD B 606  )
         E  <A 124   GLU    > matches  <B 416   GLU    >                        ( 22.4 A from    O2  FAD B 606  )
 
KERBm  3*FOUND in 3nwf  size =    3  ^    ENVELOPE GLYCOPROTEIN B;                                #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.0429 -0.4392  0.8974  0.2589 -0.8724 -0.4146 -0.9650 -0.2145 -0.1511  -147.458    57.165    65.916              
         T  <A  34   THR    > matches  <A 367   THR    >                        ( 19.4 A from    C8  NAG A1398  )
         K  <A  60   LYS    > matches  <A 151   LYS    >                        ( 18.9 A from    C8  NAG A1398  )
         E  <A 124   GLU    > matches  <A 310   GLU    >                        ( 29.6 A from    O7  NAG A1398  )
 
KERBm  3*FOUND in 1tjl  size =    3  ^    DNAK SUPPRESSOR PROTEIN;                                #    2                            
  RMSD =     1.59 A
  TRANSFORM   -0.4528  0.2381  0.8592  0.1406 -0.9326  0.3325 -0.8805 -0.2713 -0.3888    30.395   -15.519    28.167              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 15.8 A from   ZN    ZN A 200  )
         K  <A  60   LYS    > matches  <A  98   LYS    >                        ( 13.6 A from   ZN    ZN A 200  )
         E  <A 124   GLU    > matches  <A  30   GLU    >                        ( 17.8 A from   ZN    ZN A 200  )
 
KERBm  3*FOUND in 3bnj  size =    3  ^    CYTOCHROME C-552;                                       #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.0882  0.5517  0.8294  0.9869  0.0645 -0.1479  0.1350 -0.8315  0.5388   -31.585   -36.793    42.067              
         T  <A  34   THR    > matches  <A  67   THR    >                        (  6.5 A from    O2A HEM A 515  )
         K  <A  60   LYS    > matches  <A 314   LYS    >                        (  5.4 A from    O2A HEM A 515  )
         E  <A 124   GLU    > matches  <A 474   GLU    >                        ( 12.4 A from    CMA HEM A 513  )
 
KERBm  3*FOUND in 2pfm  size =    3  ^    ADENYLOSUCCINATE LYASE;                                 #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.4922  0.7429  0.4538 -0.0215  0.5315 -0.8468  0.8702 -0.4070 -0.2776    87.557    32.310    21.320              
         T  <A  34   THR    > matches  <A 215   THR    >                        (  9.0 A from    C1  MLI A 902  )
         K  <A  60   LYS    > matches  <A 181   LYS    >                        (  9.1 A from    C1  MLI A 902  )
         E  <A 124   GLU    > matches  <A 295   GLU    >                        ( 22.4 A from    O7  MLI A 902  )
 
KERBm  3*FOUND in 5ngg  size =    3  ^    BLR6230 PROTEIN;                                        #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.8298  0.2615  0.4930  0.2388  0.9648 -0.1099  0.5044 -0.0265  0.8630    25.463   -12.661     6.397              
         T  <A  34   THR    > matches  <A  77   THR    >                        ( 15.4 A from   ZN    ZN A 301  )
         K  <A  60   LYS    > matches  <A  81   LYS    >                        ( 21.1 A from   ZN    ZN A 301  )
         E  <A 124   GLU    > matches  <A 143   GLU    >                        ( 18.2 A from   ZN    ZN A 302  )
 
KERBm  3*FOUND in 5p9v  size =    3  ^    CATECHOL O-METHYLTRANSFERASE;                           #    2                            
  RMSD =     1.59 A
  TRANSFORM   -0.2755 -0.2672 -0.9234  0.2317  0.9138 -0.3335 -0.9330  0.3058  0.1898    63.229     6.418    13.256              
         T  <A  34   THR    > matches  <A 134   THR    >                        ( 13.9 A from    C6  CXS A 307  )
         K  <A  60   LYS    > matches  <A 127   LYS    >                        ( 13.2 A from    O1  CXS A 307  )
         E  <A 124   GLU    > matches  <A 190   GLU    >                        ( 13.8 A from    C8  CXS A 307  )
 
KERBm  3*FOUND in 3f9m  size =    3  ^    GLUCOKINASE;                                            #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.7788 -0.6248  0.0554 -0.6216  0.7806  0.0655  0.0842 -0.0166  0.9963    -2.446   -28.012    18.276              
         T  <A  34   THR    > matches  <A 228   THR    >                        (  6.6 A from    O6  GLC A 500  )
         K  <A  60   LYS    > matches  <A 169   LYS    >                        ( -2.8 A from    O6  GLC A 500s )
         E  <A 124   GLU    > matches  <A 421   GLU    >                        ( 20.2 A from    C6  GLC A 500  )
 
KERBm  3*FOUND in 3ugf  size =    3  ^    SUCROSE:(SUCROSE/FRUCTAN) 6-FRUCTOSYLTRANSFERASE;       #    2                            
  RMSD =     1.59 A
  TRANSFORM   -0.7709  0.5586  0.3062  0.6366  0.6603  0.3984 -0.0204 -0.5020  0.8646    24.414     3.988   -47.124              
         T  <A  34   THR    > matches  <A 221   THR    >                        ( 23.3 A from    O4  SO4 A 565  )
         K  <A  60   LYS    > matches  <A 234   LYS    >                        ( 22.7 A from    O4  SO4 A 565  )
         E  <A 124   GLU    > matches  <A 476   GLU    >                        ( 21.2 A from    C8  NAG A 555  )
 
KERBm  3*FOUND in 4mhc  size =    3  ^    NUCLEOPORIN NUP157;                                     #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.9587 -0.2343 -0.1615 -0.2307  0.9722 -0.0412 -0.1667  0.0022  0.9860    69.240   -43.803   -52.802              
         T  <A  34   THR    > matches  <A 359   THR    > 
         K  <A  60   LYS    > matches  <A 339+  LYS    > 
         E  <A 124   GLU    > matches  <A 566   GLU    > 
 
KERBm  3*FOUND in 5i0y  size =    3  ^    PERIPLASMIC PROTEIN-PROBABLY INVOLVED IN HIGH-AFFIN     #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.9461 -0.3070  0.1034  0.0847  0.5425  0.8358  0.3126  0.7820 -0.5393     6.904   -20.821    13.021              
         T  <A  34   THR    > matches  <A 113   THR    >                        ( 19.1 A from   CU  A CU A 201  )
         K  <A  60   LYS    > matches  <A 111   LYS    >                        ( 23.5 A from   CU  B CU A 201  )
         E  <A 124   GLU    > matches  <A  16   GLU    >                        ( 21.8 A from   CU    CU A 202  )
 
KERBm  3*FOUND in 4c4v  size =    3  ^    OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA;            #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.4810 -0.8764 -0.0214  0.0848 -0.0222 -0.9962 -0.8726  0.4810 -0.0850    30.907    23.148    52.819              
         T  <A  34   THR    > matches  <A 612   THR    > 
         K  <A  60   LYS    > matches  <A 610   LYS    > 
         E  <A 124   GLU    > matches  <A 717   GLU    > 
 
KERBm  3*FOUND in 1p16  size =    3  ^    MRNA CAPPING ENZYME ALPHA SUBUNIT;                      #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.4274 -0.9008  0.0764  0.9039 -0.4274  0.0175 -0.0169 -0.0765 -0.9969    85.140     4.663    81.233              
         T  <A  34   THR    > matches  <A 167   THR    >                        (  9.4 A from    O   SEP C 112  )
         K  <A  60   LYS    > matches  <A 172   LYS    >                        (  9.4 A from    O   SEP C 112  )
         E  <A 124   GLU    > matches  <A 228   GLU    >                        ( 15.0 A from    O3P SEP D 112  )
 
KERBm  3*FOUND in 3rj2  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.9656 -0.1997  0.1667  0.2119 -0.9755  0.0587 -0.1509 -0.0920 -0.9843    28.923    14.094    52.638              
         T  <A  34   THR    > matches  <X  19   THR    > 
         K  <A  60   LYS    > matches  <X  17   LYS    > 
         E  <A 124   GLU    > matches  <X 121   GLU    > 
 
KERBm  3*FOUND in 4ghb  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.6416 -0.3774 -0.6677  0.4555  0.5130 -0.7276 -0.6171  0.7710  0.1573    87.464   -26.040    33.417              
         T  <A  34   THR    > matches  <A 310   THR    >                        ( 13.6 A from    C1  GOL A 409  )
         K  <A  60   LYS    > matches  <A  64   LYS    >                        ( 14.0 A from    O1  SO4 A 402  )
         E  <A 124   GLU    > matches  <A  72   GLU    >                        ( 16.3 A from    O3  GOL A 409  )
 
KERBm  3*FOUND in 3c5v  size =    3  ^    PROTEIN PHOSPHATASE METHYLESTERASE 1;                   #    2                            
  RMSD =     1.59 A
  TRANSFORM   -0.2838 -0.2188  0.9336 -0.7929  0.6011 -0.1002  0.5393  0.7686  0.3440    29.459    40.298    -8.681              
         T  <A  34   THR    > matches  <A 294   THR    > 
         K  <A  60   LYS    > matches  <A 296   LYS    > 
         E  <A 124   GLU    > matches  <A 117   GLU    > 
 
KERBm  3*FOUND in 3ege  size =    3  ^    PUTATIVE METHYLTRANSFERASE FROM ANTIBIOTIC BIOSYNTH     #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.9484  0.1109 -0.2970 -0.2035  0.5052  0.8387 -0.2431 -0.8559  0.4565    56.060   -28.994    51.117              
         T  <A  34   THR    > matches  <A  14   THR    >                        ( 14.7 A from    O2  EDO A 261  )
         K  <A  60   LYS    > matches  <A  12+  LYS    >                        ( 12.8 A from    O2  EDO A 261  )
         E  <A 124   GLU    > matches  <A 219   GLU    >                        ( 25.8 A from    O2  EDO A 261  )
 
KERBm  3*FOUND in 1vky  size =    3  ^    S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMER     #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.6477 -0.7520 -0.1225 -0.5811 -0.5916  0.5588  0.4927  0.2908  0.8202    24.916    42.082    -1.410              
         T  <A  34   THR    > matches  <A 105   THR    >                        ( 36.7 A from    O2  UNL A 350  )
         K  <A  60   LYS    > matches  <A  72   LYS    >                        ( 37.9 A from    O2  UNL A 350  )
         E  <A 124   GLU    > matches  <A 266   GLU    >                        ( 23.3 A from    O2  UNL A 350  )
 
KERBm  3*FOUND in 2zsg  size =    3  ^    AMINOPEPTIDASE P, PUTATIVE;                             #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.6306  0.6997 -0.3360  0.5972 -0.1609  0.7858 -0.4957  0.6961  0.5193    34.580   -37.821    10.443              
         T  <A  34   THR    > matches  <A 350   THR    >                        ( 11.1 A from   ZN    ZN A1001  )
         K  <A  60   LYS    > matches  <A 143   LYS    >                        (-15.1 A from   CL    CL A1007s )
         E  <A 124   GLU    > matches  <A 252   GLU    >                        ( 13.1 A from   NA    NA A1002  )
 
KERBm  3*FOUND in 3jvv  size =    3  ^    TWITCHING MOBILITY PROTEIN;                             #    3                            
  RMSD =     1.59 A
  TRANSFORM    0.3971 -0.4741 -0.7858 -0.8295 -0.5518 -0.0862  0.3927 -0.6861  0.6124    65.689   -21.995    28.251              
         T  <A  34   THR    > matches  <A 227   THR    >                        (  6.2 A from   MG    MG A 401  )
         K  <A  60   LYS    > matches  <A 136   LYS    >                        ( -2.9 A from    O2B ACP A 400s )
         E  <A 124   GLU    > matches  <A 248   GLU    >                        ( 25.1 A from    O2G ACP A 400  )
 
KERBm  3*FOUND in 4gfi  size =    3  ^    MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FAMI     #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.7573 -0.0538 -0.6509  0.6500  0.1589  0.7431 -0.0634  0.9858 -0.1553    23.176    -3.858    12.469              
         T  <A  34   THR    > matches  <A 125   THR    >                        ( -3.5 A from    N   ALA A 402s )
         K  <A  60   LYS    > matches  <A 150   LYS    >                        (  2.8 A from    O   GLU A 403s )
         E  <A 124   GLU    > matches  <A 305   GLU    >                        ( 17.1 A from    CB  ALA A 402  )
 
KERBm  3*FOUND in 3mgu  size =    3  ^    PKHD-TYPE HYDROXYLASE TPA1;                             #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.7015 -0.6476 -0.2976  0.6891 -0.5100 -0.5147 -0.1815  0.5662 -0.8041     0.709     0.348   -22.409              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 13.6 A from   FE   FE2 A1501  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        ( 16.9 A from   FE   FE2 A1501  )
         E  <A 124   GLU    > matches  <A 283   GLU    >                        ( 21.9 A from   FE   FE2 A1501  )
 
KERBm  3*FOUND in 5zca  size =    3  ^    REPRESSOR PROTEIN CI,MALTOSE-BINDING PERIPLASMIC PR     #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.8863  0.4501  0.1086 -0.3087 -0.3995 -0.8632  0.3451  0.7986 -0.4931    39.239     7.227    11.749              
         T  <A  34   THR    > matches  <A  59   THR    >                        ( 19.6 A from    O2  CIT A 502  )
         K  <A  60   LYS    > matches  <A  57   LYS    >                        ( 20.7 A from    O2  CIT A 502  )
         E  <A 124   GLU    > matches  <A  67   GLU    >                        (  5.7 A from    O4  MAL A 501  )
 
KERBm  3*FOUND in 2jgn  size =    3  ^    ATP-DEPENDENT RNA HELICASE DDX3X;                       #    2                            
  RMSD =     1.59 A
  TRANSFORM    0.9737 -0.1700  0.1516 -0.2228 -0.8492  0.4789 -0.0474  0.5000  0.8647     2.742   -23.617   -33.844              
         T  <A  34   THR    > matches  <A 443   THR    > 
         K  <A  60   LYS    > matches  <A 439+  LYS    > 
         E  <A 124   GLU    > matches  <A 448   GLU    > 
 
KERBm  3*FOUND in 2b81  size =    3  ^    LUCIFERASE-LIKE MONOOXYGENASE;                          #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.3084 -0.4331  0.8469  0.7906 -0.6119 -0.0251 -0.5291 -0.6618 -0.5311    61.115   -23.602    64.599              
         T  <A  34   THR    > matches  <A 118   THR    >                        (  8.5 A from    O1  SO4 A2531  )
         K  <A  60   LYS    > matches  <A 114   LYS    >                        (  9.4 A from    O4  SO4 A2531  )
         E  <A 124   GLU    > matches  <A  93   GLU    >                        ( 15.0 A from    O1S MES A2403  )
 
KERBm  3*FOUND in 1j7n  size =    3  ^    LETHAL FACTOR PRECURSOR;                                #    1                            
  RMSD =     1.59 A
  TRANSFORM    0.1421 -0.0915  0.9856 -0.4164  0.8978  0.1434  0.8980  0.4308 -0.0894   -72.732   -13.610    -1.663              
         T  <A  34   THR    > matches  <A  89   THR    >                        ( 42.4 A from    O2  SO4 A 777  )
         K  <A  60   LYS    > matches  <A 102   LYS    >                        ( 41.2 A from    O2  SO4 A 777  )
         E  <A 124   GLU    > matches  <A  51   GLU    >                        ( 49.6 A from    O2  SO4 A 777  )
 
KERBm  3*FOUND in 1f1m  size =    3  ^    OUTER SURFACE PROTEIN C;                                #    1                            
  RMSD =     1.59 A
  TRANSFORM   -0.0880  0.0685 -0.9938  0.9820  0.1735 -0.0750 -0.1673  0.9824  0.0826     8.010   -16.282    15.251              
         T  <A  34   THR    > matches  <A 192   THR    >                        ( 50.4 A from   ZN    ZN A 801  )
         K  <A  60   LYS    > matches  <A 196   LYS    >                        ( 55.3 A from   ZN    ZN A 801  )
         E  <A 124   GLU    > matches  <A  61   GLU    >                        ( 37.0 A from   ZN    ZN A 801  )
 
KERBm  3*FOUND in 2ra1  size =    3  ^    SURFACE LAYER PROTEIN;                                  #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.5585  0.4145 -0.7186 -0.0313  0.8551  0.5175 -0.8289 -0.3115  0.4646    75.243   -37.629     6.003              
         T  <A  34   THR    > matches  <A 384   THR    > 
         K  <A  60   LYS    > matches  <A 386   LYS    > 
         E  <A 124   GLU    > matches  <A 442   GLU    > 
 
KERBm  3*FOUND in 1gpm  size =    3  ^    GMP SYNTHETASE;                                         #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.8931 -0.3471 -0.2863 -0.0805  0.7493 -0.6573 -0.4427  0.5640  0.6971   175.430   -11.703   -10.075              
         T  <A  34   THR    > matches  <A 477   THR    >                        (  6.7 A from    O4  PO4 A 528  )
         K  <A  60   LYS    > matches  <A 517   LYS    >                        ( -2.6 A from    O1  PO4 A 528s )
         E  <A 124   GLU    > matches  <A  29   GLU    >                        ( 17.1 A from    O5  CIT A 529  )
 
KERBm  3*FOUND in 4rs3  size =    3  ^    ABC TRANSPORTER, CARBOHYDRATE UPTAKE TRANSPORTER-2      #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.3013  0.1607  0.9399 -0.6163  0.7850  0.0634  0.7276  0.5983 -0.3355    -6.388    23.583   -28.396              
         T  <A  34   THR    > matches  <A 194   THR    >                        ( 10.5 A from    O   ACT A 433  )
         K  <A  60   LYS    > matches  <A 205   LYS    >                        ( 14.1 A from    O   ACT A 433  )
         E  <A 124   GLU    > matches  <A 125   GLU    >                        ( 14.5 A from    O1  XYL A 401  )
 
KERBm  3*FOUND in 4tw2  size =    3  ^    SCAVENGER RECEPTOR CLASS B MEMBER 2;                    #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.3403 -0.8793 -0.3333 -0.8827  0.4208 -0.2091 -0.3241 -0.2230  0.9193    34.369    17.828   -19.396              
         T  <A  34   THR    > matches  <A 251   THR    >                        ( 12.4 A from    O7  NAG A 509  )
         K  <A  60   LYS    > matches  <A 227   LYS    >                        (  7.4 A from    C1  NAG A 508  )
         E  <A 124   GLU    > matches  <A 364   GLU    >                        (  9.6 A from    O6  NAG A 518  )
 
KERBm  3*FOUND in 3miz  size =    3  ^    PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN, LACI        #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.4261  0.5004 -0.7537 -0.0085 -0.8353 -0.5497  0.9047  0.2278 -0.3601    46.956    36.104    21.661              
         T  <A  34   THR    > matches  <A 235   THR    > 
         K  <A  60   LYS    > matches  <A 239   LYS    > 
         E  <A 124   GLU    > matches  <A 226   GLU    > 
 
KERBm  3*FOUND in 2ha9  size =    3  ^    UPF0210 PROTEIN SP0239;                                 #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.8207 -0.3552 -0.4475 -0.5307 -0.7641 -0.3668  0.2116 -0.5385  0.8156     9.448    36.348   -42.139              
         T  <A  34   THR    > matches  <A 241   THR    > 
         K  <A  60   LYS    > matches  <A 244   LYS    > 
         E  <A 124   GLU    > matches  <A 334   GLU    > 
 
KERBm  3*FOUND in 2v0p  size =    3  ^    TYPE 2A PHOSPHATASE-ASSOCIATED PROTEIN 42;              #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.3183 -0.0200  0.9478 -0.2776  0.9579 -0.0730  0.9064  0.2864  0.3104     7.578   -28.784   -31.781              
         T  <A  34   THR    > matches  <A  38   THR    >                        ( 22.9 A from   ZN    ZN A1236  )
         K  <A  60   LYS    > matches  <A  41   LYS    >                        ( 28.3 A from   ZN    ZN A1236  )
         E  <A 124   GLU    > matches  <A 225   GLU    >                        (  9.9 A from   ZN    ZN A1236  )
 
KERBm  3*FOUND in 3mgg  size =    3  ^    METHYLTRANSFERASE;                                      #    2                            
  RMSD =     1.60 A
  TRANSFORM    0.5940 -0.5212 -0.6128  0.6733 -0.0948  0.7332  0.4403  0.8481 -0.2946    78.003   -31.605     7.949              
         T  <A  34   THR    > matches  <A 265   THR    > 
         K  <A  60   LYS    > matches  <A 190   LYS    > 
         E  <A 124   GLU    > matches  <A 100   GLU    > 
 
KERBm  3*FOUND in 4a8j  size =    3  ^    ELONGATOR COMPLEX PROTEIN 4;                            #    2                            
  RMSD =     1.60 A
  TRANSFORM   -0.5417  0.6241  0.5631 -0.8275 -0.2781 -0.4877  0.1478  0.7302 -0.6671   -43.415    76.517   -64.191              
         T  <A  34   THR    > matches  <A 115   THR    > 
         K  <A  60   LYS    > matches  <B 209   LYS    > 
         E  <A 124   GLU    > matches  <C 194   GLU    > 
 
KERBm  3*FOUND in 2ixd  size =    3  ^    LMBE-RELATED PROTEIN;                                   #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.6283  0.2258 -0.7444 -0.7443 -0.1038 -0.6597  0.2263 -0.9686 -0.1029   115.429   117.681    81.416              
         T  <A  34   THR    > matches  <A  23   THR    >                        ( 17.7 A from   ZN    ZN A1234  )
         K  <A  60   LYS    > matches  <A  26   LYS    >                        ( 23.9 A from   ZN    ZN A1234  )
         E  <A 124   GLU    > matches  <A 107   GLU    >                        ( 16.9 A from   ZN    ZN A1234  )
 
KERBm  3*FOUND in 5jea  size =    3  ^    EXOSOME COMPLEX COMPONENT RRP45;                        #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.5694 -0.2256  0.7905  0.4414  0.8951 -0.0625  0.6935 -0.3845 -0.6093    60.281    44.912   -48.859              
         T  <A  34   THR    > matches  <I  23   THR    >                        ( 39.8 A from   NA    NA F 301  )
         K  <A  60   LYS    > matches  <I  30+  LYS    >                        ( 42.1 A from   NA    NA F 301  )
         E  <A 124   GLU    > matches  <K 130   GLU    >                        ( 38.1 A from   NA    NA F 301  )
 
KERBm  3*FOUND in 1zb1  size =    3  ^    BRO1 PROTEIN;                                           #    2                            
  RMSD =     1.60 A
  TRANSFORM   -0.6088 -0.3592 -0.7073  0.7886 -0.3710 -0.4904  0.0863  0.8563 -0.5091    76.245    -9.579    31.038              
         T  <A  34   THR    > matches  <A 304   THR    > 
         K  <A  60   LYS    > matches  <A 307   LYS    > 
         E  <A 124   GLU    > matches  <A 187   GLU    > 
 
KERBm  3*FOUND in 1elk  size =    3  ^    TARGET OF MYB1;                                         #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.3021 -0.3221  0.8972 -0.7233 -0.5356 -0.4358 -0.6209  0.7806  0.0712    11.635    20.819    14.799              
         T  <A  34   THR    > matches  <A  72   THR    > 
         K  <A  60   LYS    > matches  <A 116   LYS    > 
         E  <A 124   GLU    > matches  <A  42   GLU    > 
 
KERBm  3*FOUND in 3v10  size =    3  ^    RHUSIOPATHIAE SURFACE PROTEIN B;                        #    2                            
  RMSD =     1.60 A
  TRANSFORM    0.8746  0.4721  0.1103  0.1748 -0.5192  0.8366 -0.4522  0.7124  0.5366    -7.213   -85.432   -13.786              
         T  <A  34   THR    > matches  <A 288   THR    > 
         K  <A  60   LYS    > matches  <A 220   LYS    > 
         E  <A 124   GLU    > matches  <A 260   GLU    > 
 
KERBm  3*FOUND in 4xjw  size =    3  ^    SIALIDASE B;                                            #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.3891 -0.7882  0.4768 -0.9107 -0.2514  0.3277  0.1385  0.5617  0.8156   -13.618   -20.299   -22.599              
         T  <A  34   THR    > matches  <A 454   THR    >                        ( 20.9 A from    C2  DMS A 702  )
         K  <A  60   LYS    > matches  <A 372   LYS    >                        ( 24.4 A from    C2  DMS A 702  )
         E  <A 124   GLU    > matches  <A 433   GLU    >                        ( 18.8 A from    O   DMS A 702  )
 
KERBm  3*FOUND in 5wti  size =    3  ^    DNA (28-MER);                                           #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.1805 -0.5994  0.7799 -0.0653 -0.7838 -0.6175 -0.9814  0.1624 -0.1023   -75.629   102.841   157.384              
         T  <A  34   THR    > matches  <Z 467   THR    >                        ( 14.5 A from   MG    MG Z1203  )
         K  <A  60   LYS    > matches  <Z 469   LYS    >                        ( 12.8 A from   MG    MG Z1203  )
         E  <A 124   GLU    > matches  <Z 407   GLU    >                        ( 29.9 A from   MG    MG Z1203  )
 
KERBm  3*FOUND in 3ff1  size =    3  ^    GLUCOSE-6-PHOSPHATE ISOMERASE;                          #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.7383 -0.4622  0.4912  0.3889  0.8868  0.2498  0.5510 -0.0066 -0.8345    11.992   -22.832   -13.040              
         T  <A  34   THR    > matches  <A 174   THR    >                        ( 25.7 A from   NA    NA A 444  )
         K  <A  60   LYS    > matches  <A 182   LYS    >                        ( 26.6 A from   NA    NA A 444  )
         E  <A 124   GLU    > matches  <A 396   GLU    >                        ( 29.8 A from   NA    NA A 444  )
 
KERBm  3*FOUND in 3wis  size =    3  ^    PUTATIVE DIHYDROMETHANOPTERIN REDUCTASE (AFPA);         #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.0943 -0.3275  0.9401 -0.8569  0.5074  0.0908  0.5067  0.7971  0.3285   -25.609   -18.426   -33.661              
         T  <A  34   THR    > matches  <A 101   THR    >                        (-12.8 A from    O4' FMN A 201s )
         K  <A  60   LYS    > matches  <A 104   LYS    >                        (  9.1 A from    O4' FMN A 201  )
         E  <A 124   GLU    > matches  <A  31   GLU    >                        ( 14.3 A from    O2  SO4 A 206  )
 
KERBm  3*FOUND in 3ged  size =    3  ^    SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR;                #    2                            
  RMSD =     1.60 A
  TRANSFORM   -0.7399  0.0360 -0.6717  0.6614  0.2211 -0.7167 -0.1227  0.9746  0.1874   109.126    -8.032   -56.162              
         T  <A  34   THR    > matches  <A  61   THR    >                        ( 12.2 A from    O3  THJ A 249  )
         K  <A  60   LYS    > matches  <A  64   LYS    >                        ( 17.8 A from    O3  THJ A 249  )
         E  <A 124   GLU    > matches  <A  98   GLU    >                        ( 14.9 A from    O1  THJ A 249  )
 
KERBm  3*FOUND in 5cwd  size =    3  ^    DESIGNED HELICAL REPEAT PROTEIN;                        #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.1256 -0.8471  0.5165  0.9326 -0.2783 -0.2297 -0.3384 -0.4528 -0.8249     3.959    20.539    33.510              
         T  <A  34   THR    > matches  <A  45   THR    > 
         K  <A  60   LYS    > matches  <A  39   LYS    > 
         E  <A 124   GLU    > matches  <A  96   GLU    > 
 
KERBm  3*FOUND in 5ksz  size =    3  ^    MITOCHONDRIAL RHO GTPASE 1;                             #    2                            
  RMSD =     1.60 A
  TRANSFORM   -0.8763 -0.4742  0.0849  0.3152 -0.6978 -0.6432 -0.3642  0.5369 -0.7610   -19.362   -52.081   -13.589              
         T  <A  34   THR    > matches  <A 266   THR    >                        ( 18.0 A from   CL    CL A 704  )
         K  <A  60   LYS    > matches  <A 264+  LYS    >                        ( 19.4 A from   CL    CL A 704  )
         E  <A 124   GLU    > matches  <A 227   GLU    >                        ( 15.5 A from   MG    MG A 701  )
 
KERBm  3*FOUND in 3psf  size =    3  ^    TRANSCRIPTION ELONGATION FACTOR SPT6;                   #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.5699 -0.6725 -0.4722 -0.1731 -0.4634  0.8691  0.8033 -0.5770 -0.1476     9.401     7.210    42.502              
         T  <A  34   THR    > matches  <A 320   THR    > 
         K  <A  60   LYS    > matches  <A 316   LYS    > 
         E  <A 124   GLU    > matches  <A1024   GLU    > 
 
KERBm  3*FOUND in 4xjc  size =    3  ^    DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE;                   #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.5730  0.4064 -0.7117 -0.2868  0.7140  0.6387 -0.7677 -0.5701  0.2926    67.729    -4.321    34.972              
         T  <A  34   THR    > matches  <A  84   THR    >                        ( 11.0 A from    O2  TTP A 201  )
         K  <A  60   LYS    > matches  <A 165   LYS    >                        ( 12.9 A from    O2  TTP A 201  )
         E  <A 124   GLU    > matches  <A  14   GLU    >                        ( 10.2 A from    O4  PEG A 203  )
 
KERBm  3*FOUND in 4ivk  size =    3  ^    CARBOXYLESTERASES;                                      #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.6116 -0.7840 -0.1062  0.6081  0.5518 -0.5708 -0.5061 -0.2845 -0.8142    31.382     3.889   -37.538              
         T  <A  34   THR    > matches  <A 259   THR    >                        ( 17.4 A from    O3  SO4 A 504  )
         K  <A  60   LYS    > matches  <A 264   LYS    >                        ( 20.2 A from    O1  SO4 A 505  )
         E  <A 124   GLU    > matches  <A 243   GLU    >                        ( 19.1 A from    O4  SO4 A 504  )
 
KERBm  3*FOUND in 2o0y  size =    3  ^    TRANSCRIPTIONAL REGULATOR;                              #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.9061  0.4230  0.0041 -0.2788 -0.5898 -0.7579  0.3182  0.6879 -0.6524    38.575    68.941    63.324              
         T  <A  34   THR    > matches  <A  23   THR    > 
         K  <A  60   LYS    > matches  <A  18+  LYS    > 
         E  <A 124   GLU    > matches  <A  43   GLU    > 
 
KERBm  3*FOUND in 1t72  size =    3  ^    PHOSPHATE TRANSPORT SYSTEM PROTEIN PHOU HOMOLOG;        #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.9591  0.2482 -0.1362 -0.0675 -0.2669 -0.9614  0.2749 -0.9312  0.2393    11.050    88.743    34.964              
         T  <A  34   THR    > matches  <A 146   THR    > 
         K  <A  60   LYS    > matches  <A 150   LYS    > 
         E  <A 124   GLU    > matches  <A  14   GLU    > 
 
KERBm  3*FOUND in 1p16  size =    3  ^    MRNA CAPPING ENZYME ALPHA SUBUNIT;                      #    2                            
  RMSD =     1.60 A
  TRANSFORM   -0.0781  0.7136 -0.6962 -0.6513  0.4922  0.5776 -0.7548 -0.4985 -0.4263    17.344   -64.518   112.614              
         T  <A  34   THR    > matches  <A  56   THR    >                        ( 15.5 A from    N2    G A1167  )
         K  <A  60   LYS    > matches  <A  60   LYS    >                        ( 15.5 A from    N2    G A1167  )
         E  <A 124   GLU    > matches  <A 246   GLU    >                        ( 16.7 A from    OP1   G A1167  )
 
KERBm  3*FOUND in 4s3q  size =    3  ^    4-ALPHA-GLUCANOTRANSFERASE;                             #    1                            
  RMSD =     1.60 A
  TRANSFORM    0.0447 -0.9925  0.1137 -0.3968 -0.1221 -0.9097 -0.9168  0.0045  0.3993   -11.198    10.271    32.992              
         T  <A  34   THR    > matches  <A  61   THR    >                        ( 18.9 A from    C1  EDO A 702  )
         K  <A  60   LYS    > matches  <A  64   LYS    >                        ( 21.8 A from    C1  EDO A 702  )
         E  <A 124   GLU    > matches  <A 429   GLU    >                        ( 14.4 A from    O1  EDO A 701  )
 
KERBm  3*FOUND in 2gum  size =    3  ^    GLYCOPROTEIN B;                                         #    2                            
  RMSD =     1.60 A
  TRANSFORM   -0.1175 -0.9662 -0.2296 -0.6648 -0.0953  0.7409  0.7378 -0.2397  0.6311   152.199   -32.491    -8.368              
         T  <A  34   THR    > matches  <A 367   THR    >                        ( 70.7 A from   NA    NA A 731  )
         K  <A  60   LYS    > matches  <A 151   LYS    >                        ( 67.9 A from   NA    NA A 731  )
         E  <A 124   GLU    > matches  <A 310   GLU    >                        ( 85.9 A from   NA    NA A 731  )
 
KERBm  3*FOUND in 5lst  size =    3  ^    ATP-DEPENDENT DNA HELICASE Q4;                          #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.4541 -0.8537 -0.2549 -0.3671  0.4399 -0.8196 -0.8118  0.2786  0.5132    27.203    17.071    66.286              
         T  <A  34   THR    > matches  <A 641   THR    >                        ( 42.6 A from   ZN    ZN A1201  )
         K  <A  60   LYS    > matches  <A 508   LYS    >                        ( 45.5 A from   ZN    ZN A1201  )
         E  <A 124   GLU    > matches  <A1110   GLU    >                        ( 46.8 A from   ZN    ZN A1201  )
 
KERBm  3*FOUND in 1mty  size =    3  ^    METHANE MONOOXYGENASE HYDROXYLASE;                      #    2                            
  RMSD =     1.60 A
  TRANSFORM   -0.7032  0.6844 -0.1926 -0.6769 -0.7273 -0.1130  0.2175 -0.0509 -0.9747    55.901    47.112    82.103              
         T  <A  34   THR    > matches  <B  73   THR    >                        ( 19.2 A from   FE    FE D   4  )
         K  <A  60   LYS    > matches  <D 185   LYS    >                        ( 19.7 A from   FE    FE D   4  )
         E  <A 124   GLU    > matches  <G 108   GLU    >                        ( 33.7 A from   FE    FE D   3  )
 
KERBm  3*FOUND in 5dik  size =    3  ^    ALKYL HYDROPEROXIDE REDUCTASE AHPD;                     #    1                            
  RMSD =     1.60 A
  TRANSFORM   -0.1515  0.8650 -0.4783 -0.7264 -0.4256 -0.5396  0.6704 -0.2657 -0.6928    16.396    56.198    35.162              
         T  <A  34   THR    > matches  <A  14   THR    > 
         K  <A  60   LYS    > matches  <A  18   LYS    > 
         E  <A 124   GLU    > matches  <A 103   GLU    > 
 
KERBm  3*FOUND in 3qfh  size =    3  ^    EPIDERMIN LEADER PEPTIDE PROCESSING SERINE PROTEASE     #    2                            
  RMSD =     1.60 A
  TRANSFORM   -0.0552 -0.9678 -0.2456  0.4211 -0.2456  0.8731  0.9053  0.0553 -0.4211    36.599   -62.168    36.950              
         T  <A  34   THR    > matches  <A 258   THR    >                        ( 13.8 A from    O3  SO4 A 462  )
         K  <A  60   LYS    > matches  <A  80   LYS    >                        ( 12.9 A from    O2  SO4 A 462  )
         E  <A 124   GLU    > matches  <A 222   GLU    >                        ( 15.9 A from    O3  SO4 A 461  )
 
KERBm  3*FOUND in 6f0a  size =    3  ^    INDOLEAMINE 2,3-DIOXYGENASE 1;                          #    2                            
  RMSD =     1.61 A
  TRANSFORM   -0.1794  0.8475  0.4995  0.4388  0.5234 -0.7304  0.8805 -0.0881  0.4658   -20.166    12.352    28.075              
         T  <A  34   THR    > matches  <A 382   THR    >                        ( -3.0 A from    O2A HEM A 503s )
         K  <A  60   LYS    > matches  <A 377   LYS    >                        (  7.6 A from    O2A HEM A 503  )
         E  <A 124   GLU    > matches  <A 311   GLU    >                        ( 13.8 A from    O2D HEM A 503  )
 
KERBm  3*FOUND in 3x0d  size =    3  ^    PROTEIN ARGININE N-METHYLTRANSFERASE 7;                 #    1                            
  RMSD =     1.61 A
  TRANSFORM   -0.8604 -0.1035  0.4990 -0.0868  0.9946  0.0568  0.5022 -0.0056  0.8647    16.220   -19.871     6.899              
         T  <A  34   THR    > matches  <A  91   THR    >                        ( 11.3 A from    C2  SAH A 701  )
         K  <A  60   LYS    > matches  <A  89   LYS    >                        ( 15.7 A from    C2  SAH A 701  )
         E  <A 124   GLU    > matches  <A 149   GLU    >                        (  5.3 A from    C5' SAH A 701  )
 
KERBm  3*FOUND in 3qcw  size =    3  ^    NEUREXIN-1-ALPHA;                                       #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.0273 -0.1829  0.9828  0.4707 -0.8650 -0.1741 -0.8819 -0.4673 -0.0625     7.180   104.029    73.884              
         T  <A  34   THR    > matches  <A 508   THR    >                        ( 83.5 A from    C8  NAG A2000  )
         K  <A  60   LYS    > matches  <A 506   LYS    >                        ( 78.8 A from    C8  NAG A2000  )
         E  <A 124   GLU    > matches  <A 352   GLU    >                        (100.9 A from    C8  NAG A2000  )
 
KERBm  3*FOUND in 2ya0  size =    3  ^    PUTATIVE ALKALINE AMYLOPULLULANASE;                     #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.3843  0.7141 -0.5851 -0.0588  0.6515  0.7564 -0.9213  0.2562 -0.2924     3.325   -67.605   121.652              
         T  <A  34   THR    > matches  <A 314   THR    >                        ( 23.8 A from    O3  GOL A1699  )
         K  <A  60   LYS    > matches  <A 239   LYS    >                        ( 24.9 A from    O3  GOL A1699  )
         E  <A 124   GLU    > matches  <A 335   GLU    >                        ( 20.7 A from    O1  GOL A1698  )
 
KERBm  3*FOUND in 4q68  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.4500  0.6390 -0.6238 -0.7806 -0.0578 -0.6223  0.4337 -0.7670 -0.4728    17.113    14.020     5.323              
         T  <A  34   THR    > matches  <A 253   THR    >                        (  5.0 A from   NA    NA A 303  )
         K  <A  60   LYS    > matches  <A 182   LYS    >                        ( 11.0 A from   NA    NA A 303  )
         E  <A 124   GLU    > matches  <A 169   GLU    >                        (  8.8 A from    C8 ANAG A 301  )
 
KERBm  3*FOUND in 1o5z  size =    3  ^    FOLYLPOLYGLUTAMATE SYNTHASE/DIHYDROFOLATE SYNTHASE;     #    1                            
  RMSD =     1.61 A
  TRANSFORM   -0.5582 -0.7249  0.4035 -0.3823  0.6564  0.6503  0.7363 -0.2088  0.6436     2.432   -60.274   -96.227              
         T  <A  34   THR    > matches  <A 403   THR    >                        (  6.2 A from   CL    CL A 601  )
         K  <A  60   LYS    > matches  <A 304   LYS    >                        ( -2.7 A from    O1  UNL A 702s )
         E  <A 124   GLU    > matches  <A 318   GLU    >                        ( 18.2 A from    O4  SO4 A 503  )
 
KERBm  3*FOUND in 4j9j  size =    3  ^    IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF;     #    3                            
  RMSD =     1.61 A
  TRANSFORM   -0.5692  0.4039 -0.7162  0.7297  0.6496 -0.2136 -0.3789  0.6442  0.6644    69.262     6.476   -41.273              
         T  <A  34   THR    > matches  <A 167   THR    > 
         K  <A  60   LYS    > matches  <A 172   LYS    > 
         E  <A 124   GLU    > matches  <A 186   GLU    > 
 
KERBm  3*FOUND in 6gru  size =    3  ^    ADP-SUGAR PYROPHOSPHATASE;                              #    1                            
  RMSD =     1.61 A
  TRANSFORM   -0.3308  0.6085  0.7213 -0.6839  0.3721 -0.6275  0.6503  0.7009 -0.2931    29.377   -13.886    38.496              
         T  <A  34   THR    > matches  <A  52   THR    >                        ( 17.7 A from   MG    MG A 301  )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        ( 21.5 A from   MG    MG A 301  )
         E  <A 124   GLU    > matches  <A 115   GLU    >                        (  5.1 A from   MG    MG A 302  )
 
KERBm  3*FOUND in 2pqg  size =    3  ^    RIBOSOME-INACTIVATING PROTEIN 3;                        #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.0016  0.7760 -0.6307 -0.9052  0.2692  0.3290 -0.4251 -0.5704 -0.7028    32.775    -3.773    56.934              
         T  <A  34   THR    > matches  <A  24   THR    > 
         K  <A  60   LYS    > matches  <A  22+  LYS    > 
         E  <A 124   GLU    > matches  <A  30   GLU    > 
 
KERBm  3*FOUND in 4i3v  size =    3  ^    ALDEHYDE DEHYDROGENASE (NAD+);                          #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.9687 -0.0370  0.2453  0.0698  0.9895 -0.1262  0.2380 -0.1394 -0.9612    -3.399   -52.541    69.802              
         T  <A  34   THR    > matches  <A 183   THR    >                        ( -4.6 A from    C3B NAD A 501s )
         K  <A  60   LYS    > matches  <A 181   LYS    >                        ( -2.8 A from    O3B NAD A 501s )
         E  <A 124   GLU    > matches  <A 336   GLU    >                        ( 17.3 A from    O1N NAD A 501  )
 
KERBm  3*FOUND in 1enf  size =    3  ^    ENTEROTOXIN H;                                          #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.6543 -0.6309  0.4170  0.4741 -0.0875 -0.8761 -0.5893 -0.7709 -0.2418   -14.652    48.706   123.424              
         T  <A  34   THR    > matches  <A 128   THR    >                        ( -7.7 A from    O4  SO4 A1004s )
         K  <A  60   LYS    > matches  <A 130   LYS    >                        ( -8.7 A from    O2  SO4 A1004s )
         E  <A 124   GLU    > matches  <A 122   GLU    >                        (-12.9 A from    O4 BSO4 A1009s )
 
KERBm  3*FOUND in 4kf7  size =    3  ^    NUP188;                                                 #    2                            
  RMSD =     1.61 A
  TRANSFORM    0.7498 -0.0377  0.6606  0.0049  0.9987  0.0514  0.6617  0.0353 -0.7490   -30.897   -33.120     5.217              
         T  <A  34   THR    > matches  <A   3   THR    > 
         K  <A  60   LYS    > matches  <A   1+  LYS    > 
         E  <A 124   GLU    > matches  <A 114   GLU    > 
 
KERBm  3*FOUND in 1s48  size =    3  ^    RNA-DEPENDENT RNA POLYMERASE;                           #    2                            
  RMSD =     1.61 A
  TRANSFORM    0.0180  0.3532 -0.9354  0.7891 -0.5795 -0.2037  0.6140  0.7344  0.2892   -20.969    91.228   -79.217              
         T  <A  34   THR    > matches  <A 421   THR    > 
         K  <A  60   LYS    > matches  <A 475   LYS    > 
         E  <A 124   GLU    > matches  <A 332   GLU    > 
 
KERBm  3*FOUND in 4r12  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.61 A
  TRANSFORM   -0.6106  0.0748 -0.7884 -0.3835  0.8431  0.3770 -0.6929 -0.5325  0.4861    33.633    -3.344     8.162              
         T  <A  34   THR    > matches  <A  35   THR    >                        ( 21.6 A from    C1  NAG A 806  )
         K  <A  60   LYS    > matches  <A  33+  LYS    >                        ( 23.9 A from    C1  NAG A 806  )
         E  <A 124   GLU    > matches  <A 433   GLU    >                        (  8.3 A from    C8  NAG A 806  )
 
KERBm  3*FOUND in 1rp3  size =    3  ^    RNA POLYMERASE SIGMA FACTOR SIGMA-28 (FLIA);            #    2                            
  RMSD =     1.61 A
  TRANSFORM    0.8395  0.4253 -0.3382 -0.1396 -0.4326 -0.8907  0.5251 -0.7950  0.3038    32.420    80.304    30.948              
         T  <A  34   THR    > matches  <B  88   THR    > 
         K  <A  60   LYS    > matches  <A  74   LYS    > 
         E  <A 124   GLU    > matches  <A 180   GLU    > 
 
KERBm  3*FOUND in 3pr7  size =    3  ^    USPA1;                                                  #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.7001 -0.1986 -0.6858  0.6845  0.4601  0.5655 -0.2032  0.8654 -0.4581    52.279   -45.424    -2.060              
         T  <A  34   THR    > matches  <A 157   THR    > 
         K  <A  60   LYS    > matches  <A 172   LYS    > 
         E  <A 124   GLU    > matches  <A  95   GLU    > 
 
KERBm  3*FOUND in 4zoh  size =    3  ^    PUTATIVE OXIDOREDUCTASE MOLYBDOPTERIN-BINDING SUBUN     #    2                            
  RMSD =     1.61 A
  TRANSFORM   -0.1855  0.0663  0.9804  0.9439  0.2893  0.1590  0.2731 -0.9550  0.1162    43.812  -105.033    36.570              
         T  <A  34   THR    > matches  <A 271   THR    >                        ( 31.6 A from    C23 1PE A 803  )
         K  <A  60   LYS    > matches  <A 364   LYS    >                        ( 32.0 A from    O4  PEG A 804  )
         E  <A 124   GLU    > matches  <A 141   GLU    >                        ( 29.1 A from    C13 1PE A 803  )
 
KERBm  3*FOUND in 3fiu  size =    3  ^    NH(3)-DEPENDENT NAD(+) SYNTHETASE;                      #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.6323 -0.4698  0.6160  0.3986 -0.4845 -0.7787 -0.6643 -0.7379  0.1191   -18.538    37.078    18.393              
         T  <A  34   THR    > matches  <A 154   THR    >                        (  8.0 A from    O2P AMP A3001  )
         K  <A  60   LYS    > matches  <A 240   LYS    >                        ( 10.3 A from    O2P AMP A3001  )
         E  <A 124   GLU    > matches  <A  95   GLU    >                        ( 15.4 A from    N6  AMP A3001  )
 
KERBm  3*FOUND in 4m37  size =    3  ^    PROTEIN ARGININE N-METHYLTRANSFERASE 7;                 #    2                            
  RMSD =     1.61 A
  TRANSFORM   -0.6660 -0.6365 -0.3889 -0.4281  0.7531 -0.4995 -0.6108  0.1661  0.7741    19.012    -4.627   -16.119              
         T  <A  34   THR    > matches  <A 199   THR    >                        ( 16.5 A from    N6  SAH A 401  )
         K  <A  60   LYS    > matches  <A 196   LYS    >                        ( 21.5 A from    N1  SAH A 401  )
         E  <A 124   GLU    > matches  <A 310   GLU    >                        ( 20.2 A from    O   SAH A 401  )
 
KERBm  3*FOUND in 3fpz  size =    3  ^    THIAZOLE BIOSYNTHETIC ENZYME;                           #    1                            
  RMSD =     1.61 A
  TRANSFORM   -0.0999  0.9338  0.3435  0.7107 -0.1747  0.6815 -0.6964 -0.3122  0.6462    -1.539   -17.621    83.304              
         T  <A  34   THR    > matches  <A 151   THR    >                        (  8.4 A from    O3  SO4 A 328  )
         K  <A  60   LYS    > matches  <A 155   LYS    >                        ( -3.2 A from    O1  SO4 A 328s )
         E  <A 124   GLU    > matches  <A 136   GLU    >                        ( 20.0 A from    C1M AHZ A1100  )
 
KERBm  3*FOUND in 3vbi  size =    3  ^    GALACTOSIDE O-ACETYLTRANSFERASE;                        #    1                            
  RMSD =     1.61 A
  TRANSFORM   -0.1166 -0.3913 -0.9129 -0.9851  0.1625  0.0562 -0.1264 -0.9058  0.4044    49.152   -36.729     5.838              
         T  <A  34   THR    > matches  <A  55   THR    >                        ( 18.6 A from    O1  BCT A 453  )
         K  <A  60   LYS    > matches  <A  53   LYS    >                        ( 21.5 A from    C2P COA A 189  )
         E  <A 124   GLU    > matches  <A 179   GLU    >                        ( 15.7 A from    O3  BCT A 453  )
 
KERBm  3*FOUND in 2as0  size =    3  ^    HYPOTHETICAL PROTEIN PH1915;                            #    2                            
  RMSD =     1.61 A
  TRANSFORM    0.0483 -0.5127 -0.8572  0.8873 -0.3720  0.2725  0.4586  0.7738 -0.4370    78.088   -64.005   -61.047              
         T  <A  34   THR    > matches  <A 180   THR    > 
         K  <A  60   LYS    > matches  <A 177   LYS    > 
         E  <A 124   GLU    > matches  <A 266   GLU    > 
 
KERBm  3*FOUND in 5dkx  size =    3  ^    ALPHA GLUCOSIDASE-LIKE PROTEIN;                         #    3                            
  RMSD =     1.61 A
  TRANSFORM    0.8560 -0.1215 -0.5024  0.2811  0.9251  0.2553 -0.4338  0.3598 -0.8261    44.766   -47.810    35.232              
         T  <A  34   THR    > matches  <A 738   THR    >                        (  6.2 A from   CL    CL A1003  )
         K  <A  60   LYS    > matches  <A 742   LYS    >                        ( -3.1 A from   CL    CL A1003s )
         E  <A 124   GLU    > matches  <A 872   GLU    >                        ( 25.8 A from   CL    CL A1003  )
 
KERBm  3*FOUND in 4i5p  size =    3  ^    SERINE/THREONINE-PROTEIN KINASE PLK2;                   #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.4250 -0.7989  0.4256 -0.7398 -0.5775 -0.3452 -0.5215  0.1682  0.8365     0.746    23.053    22.802              
         T  <A  34   THR    > matches  <A 239   THR    >                        ( 25.0 A from    O23 1D1 A 401  )
         K  <A  60   LYS    > matches  <A 254   LYS    >                        ( 27.8 A from    O23 1D1 A 401  )
         E  <A 124   GLU    > matches  <A 130   GLU    >                        (  7.6 A from    O23 1D1 A 401  )
 
KERBm  3*FOUND in 4k3c  size =    3  ^    OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA;            #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.5603  0.8251 -0.0721 -0.6477  0.3822 -0.6591  0.5163 -0.4160 -0.7486     6.628   -36.570    -1.466              
         T  <A  34   THR    > matches  <A 542   THR    > 
         K  <A  60   LYS    > matches  <A 545   LYS    > 
         E  <A 124   GLU    > matches  <A 781   GLU    > 
 
KERBm  3*FOUND in 2xzo  size =    3  ^    REGULATOR OF NONSENSE TRANSCRIPTS 1;                    #    1                            
  RMSD =     1.61 A
  TRANSFORM    0.4285  0.4995  0.7529  0.6520 -0.7479  0.1250 -0.6255 -0.4373  0.6461    40.359   -20.868    19.440              
         T  <A  34   THR    > matches  <A 499   THR    >                        (  3.3 A from   MG    MG A1006s )
         K  <A  60   LYS    > matches  <A 533   LYS    >                        (  4.4 A from    O2' ADP A1004  )
         E  <A 124   GLU    > matches  <A 686   GLU    >                        ( 13.4 A from    F3  ALF A1005  )
 
KERBm  3*FOUND in 4mx2  size =    3  ^    ADENYLOSUCCINATE LYASE;                                 #    2                            
  RMSD =     1.62 A
  TRANSFORM   -0.1088  0.4416 -0.8906  0.0336  0.8970  0.4407 -0.9935 -0.0180  0.1124    45.678   -63.637   -21.822              
         T  <A  34   THR    > matches  <A 476   THR    >                        ( 53.0 A from    O3P AMP A 501  )
         K  <A  60   LYS    > matches  <A 207   LYS    >                        ( 47.8 A from    O3P AMP A 501  )
         E  <A 124   GLU    > matches  <A 463   GLU    >                        ( 70.6 A from    O3P AMP A 501  )
 
KERBm  3*FOUND in 3uek  size =    3  ^    POLY(ADP-RIBOSE) GLYCOHYDROLASE;                        #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.4221 -0.5862 -0.6916  0.7836 -0.6195  0.0468  0.4559  0.5222 -0.7208    -0.349     1.842    42.738              
         T  <A  34   THR    > matches  <A 683   THR    > 
         K  <A  60   LYS    > matches  <A 686   LYS    > 
         E  <A 124   GLU    > matches  <A 578   GLU    > 
 
KERBm  3*FOUND in 5c2i  size =    3  ^    ALR1585 PROTEIN;                                        #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.3351 -0.9389  0.0785  0.7474  0.3156  0.5847  0.5738  0.1372 -0.8075    15.901    50.776     5.695              
         T  <A  34   THR    > matches  <A 300   THR    >                        ( 10.2 A from    O1D HEM A 501  )
         K  <A  60   LYS    > matches  <A 325   LYS    >                        ( 17.1 A from    O1D HEM A 501  )
         E  <A 124   GLU    > matches  <A 219   GLU    >                        (  9.8 A from    O1A HEM A 501  )
 
KERBm  3*FOUND in 3dv9  size =    3  ^    BETA-PHOSPHOGLUCOMUTASE;                                #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.5966 -0.7167  0.3612 -0.4527  0.0711  0.8888  0.6627  0.6938  0.2821    74.845    -7.741   -50.090              
         T  <A  34   THR    > matches  <A 123   THR    >                        ( 18.5 A from    O1 APO4 A 302  )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        ( 19.1 A from    O1 APO4 A 302  )
         E  <A 124   GLU    > matches  <A 166   GLU    >                        ( 15.0 A from    O3 APO4 A 302  )
 
KERBm  3*FOUND in 5gzu  size =    3  ^    CHITINASE;                                              #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.9297 -0.2635  0.2574  0.1668  0.9242  0.3435  0.3284  0.2764 -0.9032    27.280   -24.620    72.715              
         T  <A  34   THR    > matches  <A 634   THR    >                        ( 64.9 A from    O1  PO4 A3001  )
         K  <A  60   LYS    > matches  <A 637   LYS    >                        ( 65.2 A from    O1  PO4 A3001  )
         E  <A 124   GLU    > matches  <A 603   GLU    >                        ( 78.9 A from    O1  PO4 A3001  )
 
KERBm  3*FOUND in 4uir  size =    3  ^    OLEATE HYDRATASE;                                       #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.9103  0.0561  0.4102  0.0800 -0.9482  0.3074 -0.4062 -0.3126 -0.8586    44.940   -10.939    28.525              
         T  <A  34   THR    > matches  <A 427   THR    >                        ( 16.6 A from    C6  P6G A1649  )
         K  <A  60   LYS    > matches  <A 175   LYS    >                        ( 15.6 A from   NA    NA A1648  )
         E  <A 124   GLU    > matches  <A 390   GLU    >                        ( 12.5 A from    C7M FAD A 701  )
 
KERBm  3*FOUND in 4dgu  size =    3  ^    PUTATIVE CELL ADHESION PROTEIN;                         #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.8975 -0.2076 -0.3890  0.3763  0.8205  0.4304 -0.2298  0.5326 -0.8145    40.601   -38.604    97.318              
         T  <A  34   THR    > matches  <A 177   THR    >                        ( 12.6 A from   ZN    ZN A 302  )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        ( 17.5 A from   ZN    ZN A 302  )
         E  <A 124   GLU    > matches  <A 218   GLU    >                        ( 12.4 A from   ZN    ZN A 304  )
 
KERBm  3*FOUND in 5mzh  size =    3  ^    DYNEIN ASSEMBLY FACTOR WITH WDR REPEAT DOMAINS 1;       #    2                            
  RMSD =     1.62 A
  TRANSFORM   -0.1149  0.7270  0.6769 -0.8597  0.2687 -0.4345  0.4978  0.6319 -0.5941     5.400   -12.674    34.111              
         T  <A  34   THR    > matches  <A 160   THR    >                        ( 54.8 A from    O1  SO4 A 502  )
         K  <A  60   LYS    > matches  <A 176   LYS    >                        ( 59.7 A from    O1  SO4 A 502  )
         E  <A 124   GLU    > matches  <A 128   GLU    >                        ( 52.2 A from    O1  SO4 A 502  )
 
KERBm  3*FOUND in 3szy  size =    3  ^    PHOSPHONOACETATE HYDROLASE;                             #    2                            
  RMSD =     1.62 A
  TRANSFORM    0.6990 -0.0469 -0.7136 -0.3601  0.8390 -0.4079 -0.6178 -0.5421 -0.5696    49.497   -28.664    41.328              
         T  <A  34   THR    > matches  <A 381   THR    >                        ( 14.4 A from   ZN    ZN A 502  )
         K  <A  60   LYS    > matches  <A 254   LYS    >                        ( 14.0 A from   ZN    ZN A 501  )
         E  <A 124   GLU    > matches  <A 333   GLU    >                        ( 26.4 A from   ZN    ZN A 501  )
 
KERBm  3*FOUND in 5njl  size =    3  ^    CELL SURFACE PROTEIN (PUTATIVE S-LAYER PROTEIN);        #    4                            
  RMSD =     1.62 A
  TRANSFORM   -0.4906 -0.8393 -0.2345  0.0723 -0.3074  0.9488  0.8684 -0.4485 -0.2115    76.947     0.793   -43.625              
         T  <A  34   THR    > matches  <A 104   THR    >                        (  7.9 A from    O3  SO4 A 405  )
         K  <A  60   LYS    > matches  <A  69   LYS    >                        (  4.9 A from    O3  SO4 A 410  )
         E  <A 124   GLU    > matches  <A 125   GLU    >                        ( -5.2 A from    O2  SO4 A 411s )
 
KERBm  3*FOUND in 5m45  size =    3  ^    ACETONE CARBOXYLASE ALPHA SUBUNIT;                      #    4                            
  RMSD =     1.62 A
  TRANSFORM   -0.9862  0.0049 -0.1657 -0.0808 -0.8868  0.4550  0.1447 -0.4621 -0.8750   -23.744  -116.464    48.895              
         T  <A  34   THR    > matches  <B 326   THR    >                        (  7.6 A from    OXT ACT B 805  )
         K  <A  60   LYS    > matches  <B 328   LYS    >                        (  3.7 A from    OXT ACT B 805  )
         E  <A 124   GLU    > matches  <B 489   GLU    >                        ( 14.3 A from    OXT ACT A 803  )
 
KERBm  3*FOUND in 4nar  size =    3  ^    PUTATIVE URONATE ISOMERASE;                             #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.3958  0.9114 -0.1124  0.9113  0.3747 -0.1707  0.1134  0.1700  0.9789   -17.213   -10.958    29.187              
         T  <A  34   THR    > matches  <A  37   THR    >                        (  5.2 A from    OXT ACT A 504  )
         K  <A  60   LYS    > matches  <A  84   LYS    >                        (  9.5 A from    CH3 ACT A 504  )
         E  <A 124   GLU    > matches  <A 250   GLU    >                        ( 15.9 A from    O   ACT A 504  )
 
KERBm  3*FOUND in 2dg5  size =    3  ^    GAMMA-GLUTAMYLTRANSPEPTIDASE;                           #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.5099  0.4875  0.7088  0.6640  0.3008 -0.6846  0.5469 -0.8197  0.1703    61.039   -27.995   -22.256              
         T  <A  34   THR    > matches  <A 140   THR    >                        ( 35.7 A from    O3  GOL A 703  )
         K  <A  60   LYS    > matches  <A 136   LYS    >                        ( 37.0 A from    O3  GOL A 703  )
         E  <A 124   GLU    > matches  <A 214   GLU    >                        ( 51.2 A from    O3  GOL A 703  )
 
KERBm  3*FOUND in 4wz0  size =    3  ^    E3 UBIQUITIN-PROTEIN LIGASE LUBX;                       #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.0038 -0.5533  0.8330  0.6912  0.6034  0.3977  0.7226 -0.5743 -0.3847    25.979   -65.693    -1.276              
         T  <A  34   THR    > matches  <A  79   THR    > 
         K  <A  60   LYS    > matches  <A  69   LYS    > 
         E  <A 124   GLU    > matches  <A  88   GLU    > 
 
KERBm  3*FOUND in 2w2g  size =    3  ^    NON-STRUCTURAL PROTEIN 3;                               #    2                            
  RMSD =     1.62 A
  TRANSFORM   -0.1488 -0.1339 -0.9798  0.8290 -0.5570 -0.0498  0.5391  0.8196 -0.1939    42.368    10.025     0.520              
         T  <A  34   THR    > matches  <A 502   THR    >                        ( 23.4 A from    O2  SO4 A1653  )
         K  <A  60   LYS    > matches  <A 506   LYS    >                        ( 25.7 A from    O2  SO4 A1653  )
         E  <A 124   GLU    > matches  <A 619   GLU    >                        ( 19.0 A from    O3  SO4 A1653  )
 
KERBm  3*FOUND in 4n2k  size =    3  ^    PROTEIN-ARGININE DEIMINASE TYPE-2;                      #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.5993 -0.5336 -0.5967 -0.0605 -0.7131  0.6985  0.7982 -0.4547 -0.3951   164.339   -49.891   -65.080              
         T  <A  34   THR    > matches  <A  23   THR    >                        ( 24.1 A from   CA    CA A 705  )
         K  <A  60   LYS    > matches  <A   3+  LYS    >                        ( 25.7 A from   CA    CA A 705  )
         E  <A 124   GLU    > matches  <A 247   GLU    >                        ( 12.5 A from   CA    CA A 705  )
 
KERBm  3*FOUND in 3b4n  size =    3  ^    ENDO-PECTATE LYASE;                                     #    2                            
  RMSD =     1.62 A
  TRANSFORM    0.3257  0.9165  0.2321 -0.6270  0.0256  0.7786 -0.7077  0.3991 -0.5830   -37.718   -17.208    23.625              
         T  <A  34   THR    > matches  <A 205   THR    >                        ( 14.2 A from    O1  EDO A 801  )
         K  <A  60   LYS    > matches  <A 238   LYS    >                        ( 13.4 A from    O1  EDO A 801  )
         E  <A 124   GLU    > matches  <A 120   GLU    >                        ( 13.0 A from    O2  EDO A 801  )
 
KERBm  3*FOUND in 1qdb  size =    3  ^    CYTOCHROME C NITRITE REDUCTASE;                         #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.4841 -0.1001 -0.8693 -0.8304 -0.3656 -0.4203  0.2758 -0.9254  0.2601    67.218    72.574    28.435              
         T  <A  34   THR    > matches  <A 127   THR    >                        (  9.9 A from    CAB HEM A 515  )
         K  <A  60   LYS    > matches  <A 156   LYS    >                        ( 15.1 A from    CAB HEM A 515  )
         E  <A 124   GLU    > matches  <A 216   GLU    >                        ( -2.4 A from   CA    CA A 520s )
 
KERBm  3*FOUND in 3szy  size =    3  ^    PHOSPHONOACETATE HYDROLASE;                             #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.6572 -0.7091 -0.2557 -0.3733 -0.0115 -0.9277 -0.6548 -0.7050  0.2722    52.692    -4.056    29.409              
         T  <A  34   THR    > matches  <A 357   THR    >                        ( 11.2 A from   ZN    ZN A 502  )
         K  <A  60   LYS    > matches  <A 256   LYS    >                        ( 10.9 A from   ZN    ZN A 502  )
         E  <A 124   GLU    > matches  <A 274   GLU    >                        ( 30.4 A from   ZN    ZN A 502  )
 
KERBm  3*FOUND in 5yt0  size =    3  ^    PROBABLE TRANSLATION INITIATION FACTOR IF-2;            #    4                            
  RMSD =     1.62 A
  TRANSFORM   -0.7902 -0.4721  0.3907 -0.2731  0.8421  0.4651  0.5486 -0.2608  0.7944    39.549   -13.151    -3.310              
         T  <A  34   THR    > matches  <A 229   THR    >                        ( 27.9 A from    O6  GDP A 500  )
         K  <A  60   LYS    > matches  <A 232   LYS    >                        ( 31.8 A from    O6  GDP A 500  )
         E  <A 124   GLU    > matches  <A 191   GLU    >                        ( 21.2 A from    O6  GDP A 500  )
 
KERBm  3*FOUND in 4hsu  size =    3  ^    LYSINE-SPECIFIC HISTONE DEMETHYLASE 1B;                 #    2                            
  RMSD =     1.62 A
  TRANSFORM   -0.2995 -0.8789  0.3712  0.1434 -0.4261 -0.8932 -0.9432  0.2143 -0.2537     7.804   -25.418    36.589              
         T  <A  34   THR    > matches  <C  11   THR    >                        ( 19.9 A from    O4  FAD A 901  )
         K  <A  60   LYS    > matches  <C  14   LYS    >                        ( 17.9 A from    N3  FAD A 901  )
         E  <A 124   GLU    > matches  <A 532   GLU    >                        ( 32.0 A from    O4  FAD A 901  )
 
KERBm  3*FOUND in 3og2  size =    3  ^    BETA-GALACTOSIDASE;                                     #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.9998  0.0206 -0.0068 -0.0124  0.7992  0.6009 -0.0179  0.6007 -0.7993     5.409     5.912    -9.053              
         T  <A  34   THR    > matches  <A 483   THR    >                        ( 18.4 A from    O3  GOL A1049  )
         K  <A  60   LYS    > matches  <A 518   LYS    >                        ( 19.3 A from    O3  GOL A1049  )
         E  <A 124   GLU    > matches  <A  58   GLU    >                        ( 15.8 A from    C3  GOL A1049  )
 
KERBm  3*FOUND in 2qxf  size =    3  ^    EXODEOXYRIBONUCLEASE I;                                 #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.8978 -0.1797  0.4021  0.4370  0.4768 -0.7627  0.0546 -0.8605 -0.5066     8.198   -11.885    35.749              
         T  <A  34   THR    > matches  <A 210   THR    >                        ( 25.2 A from   MG    MG A2001  )
         K  <A  60   LYS    > matches  <A 216   LYS    >                        ( 29.9 A from   MG    MG A2001  )
         E  <A 124   GLU    > matches  <A 150   GLU    >                        ( 29.6 A from    O2P TMP A3000  )
 
KERBm  3*FOUND in 1oiz  size =    3  ^    ALPHA-TOCOPHEROL TRANSFER PROTEIN;                      #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.8397 -0.3666 -0.4007  0.2673 -0.3633  0.8925  0.4727  0.8566  0.2070    13.544   -58.030    -8.454              
         T  <A  34   THR    > matches  <A 184   THR    >                        (  8.4 A from    C7  TRT A1275  )
         K  <A  60   LYS    > matches  <A 217   LYS    >                        ( 11.1 A from    C7  TRT A1275  )
         E  <A 124   GLU    > matches  <A  82   GLU    >                        ( 13.4 A from    O18 TRT A1275  )
 
KERBm  3*FOUND in 4uav  size =    3  ^    HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAIN     #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.9700 -0.2055  0.1299  0.1582 -0.9393 -0.3045 -0.1846  0.2748 -0.9436    15.674    36.612    56.996              
         T  <A  34   THR    > matches  <A 272   THR    >                        ( 17.6 A from   MG    MG A 401  )
         K  <A  60   LYS    > matches  <A 267   LYS    >                        ( 16.7 A from   MG    MG A 401  )
         E  <A 124   GLU    > matches  <A 302   GLU    >                        ( 22.5 A from   MG    MG A 401  )
 
KERBm  3*FOUND in 3v3t  size =    3  ^    CELL DIVISION GTPASE FTSZ, DIVERGED;                    #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.2156 -0.9493 -0.2286  0.2469 -0.2795  0.9279  0.9448 -0.1436 -0.2946    29.895    15.538    52.753              
         T  <A  34   THR    > matches  <A 250   THR    > 
         K  <A  60   LYS    > matches  <A 271   LYS    > 
         E  <A 124   GLU    > matches  <A 232   GLU    > 
 
KERBm  3*FOUND in 3lmb  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.1524  0.8929  0.4236  0.8721 -0.3232  0.3674 -0.4650 -0.3135  0.8280   -24.567   -15.833    31.697              
         T  <A  34   THR    > matches  <A  55   THR    > 
         K  <A  60   LYS    > matches  <A  53   LYS    > 
         E  <A 124   GLU    > matches  <A  33   GLU    > 
 
KERBm  3*FOUND in 1jln  size =    3  ^    PROTEIN TYROSINE PHOSPHATASE, RECEPTOR TYPE, R;         #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.0752 -0.9221  0.3796  0.0221 -0.3821 -0.9239 -0.9969  0.0611 -0.0492    22.977    -0.655    29.421              
         T  <A  34   THR    > matches  <A 364   THR    > 
         K  <A  60   LYS    > matches  <A 310   LYS    > 
         E  <A 124   GLU    > matches  <A 399   GLU    > 
 
KERBm  3*FOUND in 1i4n  size =    3  ^    INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE;                   #    1                            
  RMSD =     1.62 A
  TRANSFORM    0.9835 -0.0211  0.1794  0.1387  0.7246 -0.6750  0.1157 -0.6888 -0.7156    -7.465   -11.582    26.179              
         T  <A  34   THR    > matches  <A 185   THR    >                        ( 14.6 A from    O1  SO4 A 500  )
         K  <A  60   LYS    > matches  <A   2+  LYS    >                        ( 17.5 A from    O2  SO4 A 500  )
         E  <A 124   GLU    > matches  <A 217   GLU    >                        (  9.8 A from    O1  SO4 A 500  )
 
KERBm  3*FOUND in 3wra  size =    3  ^    GALLATE DIOXYGENASE;                                    #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.6535 -0.2262  0.7224 -0.6691  0.6187 -0.4116  0.3538  0.7524  0.5557    -0.185    -2.432     5.708              
         T  <A  34   THR    > matches  <A 311   THR    >                        ( 31.9 A from   FE   FE2 A 501  )
         K  <A  60   LYS    > matches  <A 101   LYS    >                        ( 31.1 A from   FE   FE2 A 501  )
         E  <A 124   GLU    > matches  <A 377   GLU    >                        ( 39.2 A from   FE   FE2 A 501  )
 
KERBm  3*FOUND in 2ebf  size =    3  ^    DERMONECROTIC TOXIN;                                    #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.0971  0.5431  0.8340  0.9734  0.2264 -0.0341  0.2073 -0.8086  0.5507   -44.107   -24.109    17.546              
         T  <A  34   THR    > matches  <X 662   THR    >                        (  9.3 A from    C2  TRE X1415  )
         K  <A  60   LYS    > matches  <X 666   LYS    >                        ( 13.9 A from    O6  TRE X1415  )
         E  <A 124   GLU    > matches  <X 652   GLU    >                        ( 19.7 A from    O3  TRE X1414  )
 
KERBm  3*FOUND in 4oge  size =    3  ^    HNH ENDONUCLEASE DOMAIN PROTEIN;                        #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.8753 -0.4525 -0.1704 -0.3019  0.7867 -0.5384 -0.3777  0.4199  0.8253    44.180    -7.153   -78.121              
         T  <A  34   THR    > matches  <A 767   THR    >                        ( 10.2 A from   MG    MG A1202  )
         K  <A  60   LYS    > matches  <A 769   LYS    >                        ( 13.3 A from   MG    MG A1202  )
         E  <A 124   GLU    > matches  <A 656   GLU    >                        ( 16.9 A from   MG    MG A1204  )
 
KERBm  3*FOUND in 5c78  size =    3  ^    ATP-DRIVEN FLIPPASE PGLK;                               #    1                            
  RMSD =     1.62 A
  TRANSFORM   -0.5539  0.7047 -0.4435  0.8020  0.5947 -0.0566 -0.2238  0.3870  0.8945     0.200  -164.230   -52.404              
         T  <A  34   THR    > matches  <A 535   THR    >                        ( 18.5 A from    C16 1PE A 601  )
         K  <A  60   LYS    > matches  <A 374   LYS    >                        ( 19.2 A from    C16 1PE A 601  )
         E  <A 124   GLU    > matches  <A 520   GLU    >                        ( 29.2 A from    OH6 1PE A 601  )
 
KERBm  3*FOUND in 2pnq  size =    3  ^    [PYRUVATE DEHYDROGENASE [LIPOAMIDE]]-PHOSPHATASE        #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.5388  0.0844 -0.8382 -0.8341 -0.0865 -0.5448  0.1185 -0.9927 -0.0239    28.999     8.853    22.101              
         T  <A  34   THR    > matches  <A 325   THR    >                        ( 18.9 A from   MG    MG A 501  )
         K  <A  60   LYS    > matches  <A 170   LYS    >                        ( 24.3 A from   MG    MG A 501  )
         E  <A 124   GLU    > matches  <A 248   GLU    >                        ( 23.1 A from   MG    MG A 502  )
 
KERBm  3*FOUND in 4en2  size =    3  ^    AP-1 COMPLEX SUBUNIT MU-1;                              #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.9483 -0.2987 -0.1074 -0.0216  0.3983 -0.9170 -0.3167  0.8673  0.3841    -7.448    16.752    28.613              
         T  <A  34   THR    > matches  <A 422   THR    > 
         K  <A  60   LYS    > matches  <A 373   LYS    > 
         E  <A 124   GLU    > matches  <A 353   GLU    > 
 
KERBm  3*FOUND in 4zcd  size =    3  ^    RENALASE;                                               #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.0588  0.9354  0.3486  0.9926 -0.0177 -0.1201  0.1062 -0.3531  0.9295     5.981  -177.640   -54.861              
         T  <A  34   THR    > matches  <A  67   THR    >                        ( 18.0 A from    O2  FAD A 401  )
         K  <A  60   LYS    > matches  <A  70   LYS    >                        ( 16.0 A from    O2N NAD A 402  )
         E  <A 124   GLU    > matches  <A 325   GLU    >                        ( 20.5 A from    O2P FAD A 401  )
 
KERBm  3*FOUND in 2w42  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    3                            
  RMSD =     1.63 A
  TRANSFORM    0.0232 -0.9215 -0.3877 -0.7840 -0.2575  0.5649  0.6203 -0.2909  0.7284   141.625    -2.400   -24.342              
         T  <A  34   THR    > matches  <A 271   THR    >                        ( 30.3 A from   MN    MN A1428  )
         K  <A  60   LYS    > matches  <A 227   LYS    >                        ( 34.8 A from   MN    MN A1428  )
         E  <A 124   GLU    > matches  <A 359   GLU    >                        ( 39.3 A from   MN    MN A1428  )
 
KERBm  3*FOUND in 3u4q  size =    3  ^    ATP-DEPENDENT HELICASE/NUCLEASE SUBUNIT A;              #    5                            
  RMSD =     1.63 A
  TRANSFORM    0.2216 -0.4862  0.8453  0.8440  0.5298  0.0834  0.4883 -0.6949 -0.5278    13.602   -38.694    77.418              
         T  <A  34   THR    > matches  <B 512   THR    >                        ( 54.5 A from    O2  SO4 B1167  )
         K  <A  60   LYS    > matches  <B 517   LYS    >                        ( 55.1 A from    O2  SO4 B1167  )
         E  <A 124   GLU    > matches  <B 500   GLU    >                        ( 58.5 A from    O2  SO4 B1167  )
 
KERBm  3*FOUND in 3ckk  size =    3  ^    TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE;                 #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.2837  0.9589  0.0088  0.8805 -0.2569 -0.3985  0.3799 -0.1208  0.9171   -28.849   -22.978    18.138              
         T  <A  34   THR    > matches  <A 206   THR    >                        (  0.8 A from    CB  THR A 206  )
         K  <A  60   LYS    > matches  <A 212   LYS    >                        (  0.0 A from    NZ  LYS A 212  )
         E  <A 124   GLU    > matches  <A 197   GLU    >                        (  0.5 A from    CD  GLU A 197  )
 
KERBm  3*FOUND in 2kfn  size =    3  ^    5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3';                      #    2                            
  RMSD =     1.63 A
  TRANSFORM   -0.8769  0.4674  0.1124 -0.4758 -0.8773 -0.0631 -0.0691  0.1089 -0.9917    58.668    38.319   136.813              
         T  <A  34   THR    > matches  <A 639   THR    >                        ( 20.9 A from   ZN    ZN A 320  )
         K  <A  60   LYS    > matches  <A 643   LYS    >                        ( 26.7 A from   ZN    ZN A 320  )
         E  <A 124   GLU    > matches  <A 615   GLU    >                        ( 20.6 A from   ZN    ZN A 320  )
 
KERBm  3*FOUND in 2vxn  size =    3  ^    TRIOSEPHOSPHATE ISOMERASE;                              #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.5003  0.6342 -0.5895 -0.5129  0.3314  0.7919 -0.6976 -0.6985 -0.1595    44.333     1.174    36.423              
         T  <A  34   THR    > matches  <A 174   THR    >                        (  6.6 A from    O3PAPGH A1251  )
         K  <A  60   LYS    > matches  <A 176   LYS    >                        (  8.4 A from    O3  GOL A1256  )
         E  <A 124   GLU    > matches  <A 104   GLU    >                        (  7.4 A from    O3  GOL A1253  )
 
KERBm  3*FOUND in 2fcw  size =    3  ^    ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED               #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.6330 -0.6467 -0.4257  0.0319 -0.5711  0.8203  0.7735 -0.5056 -0.3821    47.026   -12.029    25.582              
         T  <A  34   THR    > matches  <A 303   THR    >                        ( 10.4 A from   CA    CA B3002  )
         K  <A  60   LYS    > matches  <A 306   LYS    >                        ( 14.8 A from   CA    CA B3002  )
         E  <A 124   GLU    > matches  <B 153   GLU    >                        ( -3.6 A from    O4  MPD A4001s )
 
KERBm  3*FOUND in 5im3  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE;                   #    2                            
  RMSD =     1.63 A
  TRANSFORM    0.1309  0.7002 -0.7019  0.8162 -0.4779 -0.3246  0.5627  0.5304  0.6340    48.736   -22.781   -28.920              
         T  <A  34   THR    > matches  <A 230   THR    >                        ( 32.8 A from    N6  DTP A1004  )
         K  <A  60   LYS    > matches  <A 199   LYS    >                        ( 31.5 A from    O1G DTP A1004  )
         E  <A 124   GLU    > matches  <A 290   GLU    >                        ( 42.4 A from    N6  DTP A1004  )
 
KERBm  3*FOUND in 1ck7  size =    3  ^    PROTEIN (GELATINASE A);                                 #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.3695 -0.8705 -0.3252  0.5920  0.0492 -0.8044 -0.7162  0.4898 -0.4972   176.275    91.684    98.651              
         T  <A  34   THR    > matches  <A  86   THR    >                        ( 18.8 A from    O4  SO4 A 777  )
         K  <A  60   LYS    > matches  <A  71   LYS    >                        ( 18.0 A from    O4  SO4 A 777  )
         E  <A 124   GLU    > matches  <A 484   GLU    >                        ( 15.2 A from   NA    NA A 996  )
 
KERBm  3*FOUND in 3m7p  size =    3  ^    FN1 PROTEIN;                                            #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.7743  0.4257 -0.4682 -0.5084  0.0220  0.8608 -0.3768 -0.9046 -0.1994    34.921    15.352    78.498              
         T  <A  34   THR    > matches  <A 370   THR    >                        ( 10.2 A from   ZN    ZN A 953  )
         K  <A  60   LYS    > matches  <A 533   LYS    >                        (  9.1 A from    C26 12P A 190  )
         E  <A 124   GLU    > matches  <A 358   GLU    >                        ( 13.7 A from    C24 12P A 189  )
 
KERBm  3*FOUND in 4loc  size =    3  ^    PYRUVATE CARBOXYLASE;                                   #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.7102 -0.6023  0.3644  0.6826 -0.4624  0.5659  0.1723 -0.6507 -0.7395    -7.215    -4.399    25.927              
         T  <A  34   THR    > matches  <A 748   THR    >                        (  7.2 A from    C   KCX A 718  )
         K  <A  60   LYS    > matches  <A 719+  LYS    >                        (  3.2 A from    C   KCX A 718  )
         E  <A 124   GLU    > matches  <A 791   GLU    >                        ( 22.2 A from   MG    MG A1102  )
 
KERBm  3*FOUND in 4p6z  size =    3  ^    AP-1 COMPLEX SUBUNIT GAMMA-1;                           #    2                            
  RMSD =     1.63 A
  TRANSFORM   -0.4676 -0.7392 -0.4847 -0.2443  0.6351 -0.7328 -0.8495  0.2243  0.4776   -16.160    31.298   -26.559              
         T  <A  34   THR    > matches  <B 363   THR    > 
         K  <A  60   LYS    > matches  <M 373   LYS    > 
         E  <A 124   GLU    > matches  <B 441   GLU    > 
 
KERBm  3*FOUND in 1tzp  size =    3  ^    PENICILLIN-INSENSITIVE MUREIN ENDOPEPTIDASE;            #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.0306  0.9465  0.3213  0.9461 -0.1312  0.2962 -0.3225 -0.2949  0.8994    13.120   -42.102    -0.376              
         T  <A  34   THR    > matches  <A 174   THR    >                        (  8.9 A from    O2  SO4 A 568  )
         K  <A  60   LYS    > matches  <A 199   LYS    >                        ( 12.8 A from    O2  SO4 A 568  )
         E  <A 124   GLU    > matches  <A 222   GLU    >                        ( 23.2 A from    O1  SO4 A 568  )
 
KERBm  3*FOUND in 3tbk  size =    3  ^    RIG-I HELICASE DOMAIN;                                  #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.7017  0.2113 -0.6804  0.2469 -0.8237 -0.5105  0.6683  0.5262 -0.5258    74.426    22.169     9.271              
         T  <A  34   THR    > matches  <A 410   THR    >                        (  9.7 A from    O3G ANP A   1  )
         K  <A  60   LYS    > matches  <A 271   LYS    >                        ( -2.9 A from    O3G ANP A   1s )
         E  <A 124   GLU    > matches  <A 788   GLU    >                        ( 19.0 A from    C2  EDO A 795  )
 
KERBm  3*FOUND in 4lii  size =    3  ^    APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL;             #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.9237  0.3297  0.1951  0.1959 -0.8441  0.4991 -0.3292  0.4228  0.8443   -23.088    27.619    26.308              
         T  <A  34   THR    > matches  <A 391   THR    >                        ( 20.0 A from    C7M FAD A 700  )
         K  <A  60   LYS    > matches  <A 378   LYS    >                        ( 25.7 A from    C7M FAD A 700  )
         E  <A 124   GLU    > matches  <A 336   GLU    >                        (  4.2 A from    O2  EDO A 702  )
 
KERBm  3*FOUND in 3i0w  size =    3  ^    8-OXOGUANINE-DNA-GLYCOSYLASE;                           #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.2381 -0.9647 -0.1125  0.5383  0.2275 -0.8115 -0.8084 -0.1327 -0.5735    -7.225    -3.667    42.241              
         T  <A  34   THR    > matches  <A 160   THR    >                        ( 13.1 A from    O2  EDO A 292  )
         K  <A  60   LYS    > matches  <A 163   LYS    >                        ( 17.7 A from    C1  EDO A 291  )
         E  <A 124   GLU    > matches  <A  69   GLU    >                        ( 10.6 A from    O2  EDO A 293  )
 
KERBm  3*FOUND in 1vli  size =    3  ^    SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSE     #    2                            
  RMSD =     1.63 A
  TRANSFORM    0.1036  0.4870  0.8672 -0.7474 -0.5372  0.3910 -0.6563  0.6886 -0.3084   -68.285   -32.540    30.115              
         T  <A  34   THR    > matches  <A 108   THR    >                        (  9.0 A from   ZN    ZN A 374  )
         K  <A  60   LYS    > matches  <A  50   LYS    >                        (  6.0 A from   ZN    ZN A 374  )
         E  <A 124   GLU    > matches  <A 171   GLU    >                        ( 28.1 A from   ZN    ZN A 374  )
 
KERBm  3*FOUND in 2jdi  size =    3  ^    ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM;               #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.1637 -0.6960 -0.6991  0.4768 -0.5645  0.6737  0.8636  0.4437 -0.2394   127.627   -50.121   -14.026              
         T  <A  34   THR    > matches  <G   7   THR    >                        ( 19.4 A from    O1B ANP A1511  )
         K  <A  60   LYS    > matches  <G  11   LYS    >                        ( 17.6 A from    O1B ANP A1511  )
         E  <A 124   GLU    > matches  <G 261   GLU    >                        ( 20.2 A from    O3G ANP A1511  )
 
KERBm  3*FOUND in 3jx9  size =    3  ^    PUTATIVE PHOSPHOHEPTOSE ISOMERASE;                      #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.7643  0.6418  0.0619  0.6417 -0.7666  0.0253 -0.0637 -0.0203  0.9978    10.826    31.332     1.513              
         T  <A  34   THR    > matches  <A  15   THR    >                        ( 27.1 A from    O1  GOL A 171  )
         K  <A  60   LYS    > matches  <A  18   LYS    >                        ( 28.9 A from    O1  GOL A 171  )
         E  <A 124   GLU    > matches  <A  47   GLU    >                        ( 26.5 A from    O1  GOL A 171  )
 
KERBm  3*FOUND in 3woy  size =    3  ^    CLIP-ASSOCIATING PROTEIN 2;                             #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.7778 -0.5729 -0.2585 -0.2458  0.1013 -0.9640 -0.5785 -0.8133  0.0620    52.058     2.022    24.280              
         T  <A  34   THR    > matches  <A 258   THR    > 
         K  <A  60   LYS    > matches  <A 261   LYS    > 
         E  <A 124   GLU    > matches  <A 176   GLU    > 
 
KERBm  3*FOUND in 4g6u  size =    3  ^    EC869 CDIA-CT;                                          #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.0093  0.6102  0.7922 -0.8650 -0.3925  0.3126 -0.5017  0.6881 -0.5242   -30.332   -15.117    10.308              
         T  <A  34   THR    > matches  <A 292   THR    >                        ( 17.3 A from   ZN    ZN A 301  )
         K  <A  60   LYS    > matches  <A 290   LYS    >                        ( 19.7 A from   ZN    ZN A 301  )
         E  <A 124   GLU    > matches  <A 160   GLU    >                        ( 24.1 A from   ZN    ZN A 301s )
 
KERBm  3*FOUND in 3kt7  size =    3  ^    PKHD-TYPE HYDROXYLASE TPA1;                             #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.1117 -0.7209 -0.6840  0.2932 -0.6337  0.7158  0.9495  0.2805 -0.1405   -12.617     5.211    54.742              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 11.6 A from    O1  AKG A 702  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        ( 12.4 A from    O1  AKG A 702  )
         E  <A 124   GLU    > matches  <A 283   GLU    >                        ( 18.1 A from    O3  GOL A 707  )
 
KERBm  3*FOUND in 2qr7  size =    3  ^    RIBOSOMAL PROTEIN S6 KINASE ALPHA-3;                    #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.0192  0.9974  0.0690 -0.9935 -0.0112 -0.1133  0.1122  0.0707 -0.9912   -12.888    37.097   149.635              
         T  <A  34   THR    > matches  <A 478   THR    >                        ( -3.1 A from   NA    NA A1000s )
         K  <A  60   LYS    > matches  <A 480   LYS    >                        (  7.5 A from   NA    NA A1000  )
         E  <A 124   GLU    > matches  <A 528   GLU    >                        ( 17.7 A from   NA    NA A1000  )
 
KERBm  3*FOUND in 3fhr  size =    3  ^    MAP KINASE-ACTIVATED PROTEIN KINASE 3;                  #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.1242 -0.1408 -0.9822  0.0580  0.9871 -0.1489 -0.9906  0.0755  0.1144    47.483     6.658    43.452              
         T  <A  34   THR    > matches  <A 194   THR    >                        ( 19.1 A from    O26 P4O A   1  )
         K  <A  60   LYS    > matches  <A 217+  LYS    >                        ( 22.5 A from    O26 P4O A   1  )
         E  <A 124   GLU    > matches  <A  33   GLU    >                        ( 18.3 A from    O26 P4O A   1  )
 
KERBm  3*FOUND in 3sto  size =    3  ^    SERINE PROTEASE INHIBITOR;                              #    2                            
  RMSD =     1.63 A
  TRANSFORM    0.2462 -0.9376  0.2458  0.4893 -0.0987 -0.8665 -0.8366 -0.3335 -0.4345    37.239   -27.377    49.716              
         T  <A  34   THR    > matches  <A 299   THR    > 
         K  <A  60   LYS    > matches  <A 301   LYS    > 
         E  <A 124   GLU    > matches  <A 203   GLU    > 
 
KERBm  3*FOUND in 3q1d  size =    3  ^    TRIPARTITE MOTIF-CONTAINING PROTEIN 54;                 #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.8030  0.5952 -0.0287 -0.5751  0.7615 -0.2988  0.1560 -0.2564 -0.9539    -9.721    -1.433    26.123              
         T  <A  34   THR    > matches  <A 165   THR    >                        ( 14.3 A from   ZN    ZN A 202  )
         K  <A  60   LYS    > matches  <A 168   LYS    >                        ( 17.8 A from   ZN    ZN A 202  )
         E  <A 124   GLU    > matches  <A 128   GLU    >                        (  5.6 A from   ZN    ZN A 202  )
 
KERBm  3*FOUND in 3k8p  size =    3  ^    DSL1;                                                   #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.0395 -0.3272  0.9441 -0.1731 -0.9328 -0.3160 -0.9841  0.1509  0.0935   -80.610    56.066    25.925              
         T  <A  34   THR    > matches  <D 588   THR    > 
         K  <A  60   LYS    > matches  <D 541   LYS    > 
         E  <A 124   GLU    > matches  <C 474   GLU    > 
 
KERBm  3*FOUND in 3dmn  size =    3  ^    PUTATIVE DNA HELICASE;                                  #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.2810  0.7915  0.5427  0.9375  0.3474 -0.0212  0.2053 -0.5028  0.8397    -8.209   -55.954    38.497              
         T  <A  34   THR    > matches  <A 605   THR    >                        ( 15.1 A from    OXT ACT A   3  )
         K  <A  60   LYS    > matches  <A 609   LYS    >                        ( 14.0 A from    OXT ACT A   3  )
         E  <A 124   GLU    > matches  <A 653   GLU    >                        ( 13.1 A from    C   FMT A 771  )
 
KERBm  3*FOUND in 3t57  size =    3  ^    UDP-N-ACETYLGLUCOSAMINE O-ACYLTRANSFERASE DOMAIN-CO     #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.7837 -0.4723  0.4035 -0.6088  0.4551 -0.6498 -0.1233  0.7549  0.6442    45.604    -9.584   -14.394              
         T  <A  34   THR    > matches  <A 164   THR    > 
         K  <A  60   LYS    > matches  <A 183   LYS    > 
         E  <A 124   GLU    > matches  <A 104   GLU    > 
 
KERBm  3*FOUND in 5hsa  size =    3  ^    ALCOHOL OXIDASE 1;                                      #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.6031 -0.1030 -0.7910  0.6020 -0.7093 -0.3667  0.5233  0.6973 -0.4898   178.749    36.457   131.906              
         T  <A  34   THR    > matches  <A 353   THR    >                        ( 12.4 A from    O4  FAS A 701  )
         K  <A  60   LYS    > matches  <A 192   LYS    >                        (  9.7 A from    O4  FAS A 701  )
         E  <A 124   GLU    > matches  <A 334   GLU    >                        (  9.2 A from    O1 BPO4 A 704  )
 
KERBm  3*FOUND in 5b2r  size =    3  ^    GUIDE RNA;                                              #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.7122  0.0546 -0.6999  0.5264 -0.6180 -0.5839  0.4644  0.7843 -0.4114    39.890    34.634    90.655              
         T  <A  34   THR    > matches  <B1048   THR    >                        ( 49.8 A from    K     K B1406  )
         K  <A  60   LYS    > matches  <B1076   LYS    >                        ( 48.2 A from    K     K B1406  )
         E  <A 124   GLU    > matches  <B1250   GLU    >                        ( 49.6 A from    K     K B1402  )
 
KERBm  3*FOUND in 5c5h  size =    3  ^    2-SUCCINYLBENZOATE--COA LIGASE;                         #    2                            
  RMSD =     1.63 A
  TRANSFORM    0.0087 -0.0903  0.9959  0.8928  0.4493  0.0330  0.4504 -0.8888 -0.0846    57.847   -80.207   -36.121              
         T  <A  34   THR    > matches  <A 219   THR    >                        ( 16.1 A from    C7  4YB A 502  )
         K  <A  60   LYS    > matches  <A 241   LYS    >                        ( 19.5 A from    C7  4YB A 502  )
         E  <A 124   GLU    > matches  <A  26   GLU    >                        ( 15.4 A from   MG    MG A 501  )
 
KERBm  3*FOUND in 2wjn  size =    3  ^    PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT     #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.6084  0.4064  0.6817 -0.6778 -0.7128 -0.1801 -0.4127  0.5716 -0.7091   -21.414    36.914    55.998              
         T  <A  34   THR    > matches  <C 252   THR    >                        (  8.8 A from    O2A HEM C 403  )
         K  <A  60   LYS    > matches  <C 259   LYS    >                        ( 14.5 A from    O2A HEM C 403  )
         E  <A 124   GLU    > matches  <M 171   GLU    >                        ( 10.7 A from    CMD BCB M 402  )
 
KERBm  3*FOUND in 2pyx  size =    3  ^    TRYPTOPHAN HALOGENASE;                                  #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.7660  0.0526  0.6407  0.5136  0.5494 -0.6591  0.3866 -0.8339 -0.3938   -33.132   -62.261    63.973              
         T  <A  34   THR    > matches  <A  61   THR    >                        ( 10.4 A from    C1  PG4 A 529  )
         K  <A  60   LYS    > matches  <A  88   LYS    >                        ( 12.5 A from   CL    CL A 526  )
         E  <A 124   GLU    > matches  <A  28   GLU    >                        ( -3.8 A from    C7  PG4 A 529s )
 
KERBm  3*FOUND in 2bmb  size =    3  ^    FOLIC ACID SYNTHESIS PROTEIN FOL1;                      #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.3108 -0.5614  0.7670  0.9345 -0.3279  0.1386 -0.1736 -0.7598 -0.6265   -10.680   -14.228    82.363              
         T  <A  34   THR    > matches  <A 683   THR    >                        ( 10.0 A from    C4A PMM A1865  )
         K  <A  60   LYS    > matches  <A 762   LYS    >                        (  8.6 A from    O4  PMM A1865  )
         E  <A 124   GLU    > matches  <A 606   GLU    >                        ( 18.6 A from    N8  PMM A1865  )
 
KERBm  3*FOUND in 2gxg  size =    3  ^    146AA LONG HYPOTHETICAL TRANSCRIPTIONAL REGULATOR;      #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.8350 -0.3250  0.4440 -0.5489  0.5480 -0.6311  0.0382  0.7707  0.6360    32.372    33.138   -31.089              
         T  <A  34   THR    > matches  <A 103   THR    > 
         K  <A  60   LYS    > matches  <A  99   LYS    > 
         E  <A 124   GLU    > matches  <A  25   GLU    > 
 
KERBm  3*FOUND in 2vob  size =    3  ^    TRYPANOTHIONE SYNTHETASE;                               #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.7049  0.2710 -0.6555 -0.6941  0.0736 -0.7161  0.1459 -0.9598 -0.2400    45.353    -8.333   -14.249              
         T  <A  34   THR    > matches  <A 337   THR    >                        ( 49.1 A from   CL    CL A1653  )
         K  <A  60   LYS    > matches  <A 217   LYS    >                        ( 52.1 A from   CL    CL A1653  )
         E  <A 124   GLU    > matches  <A 539   GLU    >                        ( 47.8 A from   CL    CL A1653  )
 
KERBm  3*FOUND in 5xne  size =    3  ^    ALPHA-ACETOLACTATE DECARBOXYLASE;                       #    2                            
  RMSD =     1.63 A
  TRANSFORM    0.9503 -0.3017  0.0772 -0.2923 -0.9496 -0.1131 -0.1074 -0.0849  0.9906    10.637    14.432    54.298              
         T  <A  34   THR    > matches  <A  94   THR    >                        ( 15.9 A from   ZN    ZN A 301  )
         K  <A  60   LYS    > matches  <A  19+  LYS    >                        ( 22.0 A from   ZN    ZN A 301  )
         E  <A 124   GLU    > matches  <A 251   GLU    >                        (  4.5 A from   ZN    ZN A 301  )
 
KERBm  3*FOUND in 4rs3  size =    3  ^    ABC TRANSPORTER, CARBOHYDRATE UPTAKE TRANSPORTER-2      #    2                            
  RMSD =     1.63 A
  TRANSFORM   -0.8239  0.3691 -0.4300  0.1511  0.8744  0.4611 -0.5462 -0.3149  0.7762    65.742   -37.452    23.964              
         T  <A  34   THR    > matches  <A  57   THR    >                        (  7.1 A from   CL    CL A 421  )
         K  <A  60   LYS    > matches  <A  60   LYS    >                        (  3.4 A from   CL    CL A 420s )
         E  <A 124   GLU    > matches  <A 312   GLU    >                        ( 15.2 A from   CL  B CL A 423  )
 
KERBm  3*FOUND in 5ifp  size =    3  ^    BETA-GALACTOSIDASE A;                                   #    2                            
  RMSD =     1.63 A
  TRANSFORM   -0.6892  0.1413 -0.7107  0.2987 -0.8382 -0.4563  0.6601  0.5268 -0.5354    -6.925   -61.267     7.123              
         T  <A  34   THR    > matches  <A 493   THR    >                        ( 14.0 A from    O6  NAG A1478  )
         K  <A  60   LYS    > matches  <A 495   LYS    >                        ( 11.0 A from    O6  NAG A1478  )
         E  <A 124   GLU    > matches  <A 511   GLU    >                        (  8.8 A from    O3  MAN A1626  )
 
KERBm  3*FOUND in 4mlv  size =    3  ^    PORPHOBILINOGEN DEAMINASE;                              #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.5797 -0.8116 -0.0723  0.7350 -0.4825 -0.4764 -0.3518  0.3293 -0.8762     6.183    12.298    35.393              
         T  <A  34   THR    > matches  <A 260   THR    >                        ( 14.8 A from    O2AB29P A 402  )
         K  <A  60   LYS    > matches  <A 273   LYS    >                        ( 15.5 A from    O2AB29P A 402  )
         E  <A 124   GLU    > matches  <A 100   GLU    >                        (  9.0 A from    O3BADPM A 401  )
 
KERBm  3*FOUND in 1jy1  size =    3  ^    TYROSYL-DNA PHOSPHODIESTERASE;                          #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.4811  0.6007  0.6385 -0.1722 -0.6494  0.7407 -0.8596  0.4663  0.2090   -32.691   -32.286    73.088              
         T  <A  34   THR    > matches  <A 281   THR    > 
         K  <A  60   LYS    > matches  <A 265   LYS    > 
         E  <A 124   GLU    > matches  <A 483   GLU    > 
 
KERBm  3*FOUND in 4nf0  size =    3  ^    PROBABLE C4-DICARBOXYLATE-BINDING PROTEIN;              #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.7121  0.6864  0.1474  0.1799 -0.0246  0.9834 -0.6787 -0.7268  0.1060     6.711   -47.755    19.444              
         T  <A  34   THR    > matches  <A  92   THR    >                        (  7.0 A from    O4A LMR A 401  )
         K  <A  60   LYS    > matches  <A  96   LYS    >                        ( -2.7 A from    O1A LMR A 401s )
         E  <A 124   GLU    > matches  <A  65   GLU    >                        ( 21.0 A from    O4A LMR A 401  )
 
KERBm  3*FOUND in 5ndx  size =    3  ^    GLYCOSYL HYDROLASE;                                     #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.7888 -0.4429 -0.4262 -0.5131  0.8562  0.0599 -0.3384 -0.2659  0.9026    79.882   -49.326    56.225              
         T  <A  34   THR    > matches  <A 232   THR    >                        ( 16.9 A from    O6  8U8 A 712  )
         K  <A  60   LYS    > matches  <A 234   LYS    >                        ( 15.4 A from    O6  8U8 A 712  )
         E  <A 124   GLU    > matches  <A 457   GLU    >                        ( 10.1 A from    O3  SO4 A 705  )
 
KERBm  3*FOUND in 4r5o  size =    3  ^    QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN;       #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.5083 -0.6406 -0.5756 -0.7612  0.6468 -0.0477 -0.4028 -0.4139  0.8164    83.945    24.087    15.615              
         T  <A  34   THR    > matches  <A 357   THR    >                        ( 20.0 A from    O10 7PE A 503  )
         K  <A  60   LYS    > matches  <A 305   LYS    >                        ( 17.3 A from   CA    CA A 508  )
         E  <A 124   GLU    > matches  <A 139   GLU    >                        ( 16.3 A from   CA    CA A 509  )
 
KERBm  3*FOUND in 2p6c  size =    3  ^    AQ_2013 PROTEIN;                                        #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.7114 -0.4828  0.5107  0.0622 -0.6806 -0.7300 -0.7000 -0.5511  0.4542    22.226   -17.609     3.674              
         T  <A  34   THR    > matches  <A  22   THR    >                        ( 23.4 A from    O2  PO4 A1001  )
         K  <A  60   LYS    > matches  <A  26   LYS    >                        ( 28.9 A from    O2  PO4 A1001  )
         E  <A 124   GLU    > matches  <A  57   GLU    >                        ( 19.1 A from    O2  PO4 A1003  )
 
KERBm  3*FOUND in 2z86  size =    3  ^    CHONDROITIN SYNTHASE;                                   #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.4216  0.2318  0.8766 -0.2903 -0.8814  0.3727 -0.8591  0.4116  0.3043    57.998     5.692   -14.468              
         T  <A  34   THR    > matches  <A 427   THR    >                        ( 25.4 A from    O4' UGA A 683  )
         K  <A  60   LYS    > matches  <A 429   LYS    >                        ( 22.9 A from    O4' UGA A 683  )
         E  <A 124   GLU    > matches  <A  81   GLU    >                        ( 42.7 A from    O'Q UGA A 683  )
 
KERBm  3*FOUND in 5im3  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE;                   #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.1350  0.7750 -0.6174  0.8307 -0.2511 -0.4969  0.5401  0.5799  0.6099    52.690   -16.245   -27.333              
         T  <A  34   THR    > matches  <A 230   THR    >                        ( 32.8 A from    N6  DTP A1004  )
         K  <A  60   LYS    > matches  <A 199   LYS    >                        ( 31.5 A from    O1G DTP A1004  )
         E  <A 124   GLU    > matches  <A 174   GLU    >                        ( 45.4 A from    N6  DTP A1004  )
 
KERBm  3*FOUND in 1gjw  size =    3  ^    MALTODEXTRIN GLYCOSYLTRANSFERASE;                       #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.8237 -0.1386 -0.5499 -0.5653 -0.1242 -0.8155 -0.0447 -0.9825  0.1807    61.284     1.308    77.640              
         T  <A  34   THR    > matches  <A 267   THR    >                        ( 23.1 A from    O4  MAL A 700  )
         K  <A  60   LYS    > matches  <A 225   LYS    >                        ( 25.9 A from    O4  MAL A 700  )
         E  <A 124   GLU    > matches  <A 357   GLU    >                        ( 23.6 A from    O1  PO4 A 699  )
 
KERBm  3*FOUND in 4ic1  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.6832 -0.7010  0.2046 -0.6601 -0.4731  0.5834  0.3122  0.5337  0.7860     4.146    16.577     6.138              
         T  <A  34   THR    > matches  <A  23   THR    >                        ( 19.3 A from   MN    MN A 301  )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        ( 24.0 A from   MN    MN A 301  )
         E  <A 124   GLU    > matches  <A  44   GLU    >                        ( 17.1 A from    S3  SF4 A 302  )
 
KERBm  3*FOUND in 5agd  size =    3  ^    ALPHA-1,6-MANNANASE;                                    #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.4079  0.8154 -0.4107  0.6567 -0.0505 -0.7525  0.6343  0.5767  0.5149    36.592    -0.510    49.326              
         T  <A  34   THR    > matches  <A 312   THR    >                        ( 24.7 A from    O3  MAN A 501  )
         K  <A  60   LYS    > matches  <A 257   LYS    >                        ( 25.2 A from    O3  MAN A 501  )
         E  <A 124   GLU    > matches  <A 328   GLU    >                        ( 25.8 A from    C6  MAN A 504  )
 
KERBm  3*FOUND in 4fn6  size =    3  ^    THIAMINASE-2;                                           #    1                            
  RMSD =     1.63 A
  TRANSFORM    0.6117  0.1937  0.7670 -0.7264 -0.2466  0.6415 -0.3134  0.9496  0.0101    18.543    44.804     9.300              
         T  <A  34   THR    > matches  <A 160   THR    >                        ( 15.9 A from    O2  GOL A 303  )
         K  <A  60   LYS    > matches  <A 158   LYS    >                        ( 18.9 A from    O1  GOL A 303  )
         E  <A 124   GLU    > matches  <A 208   GLU    >                        ( -2.5 A from    OXT ACT A 302s )
 
KERBm  3*FOUND in 4fxy  size =    3  ^    NEUROLYSIN, MITOCHONDRIAL;                              #    2                            
  RMSD =     1.63 A
  TRANSFORM    0.3663  0.8315  0.4176  0.8767 -0.4588  0.1444 -0.3116 -0.3132  0.8971   -16.540   -66.836   -23.405              
         T  <A  34   THR    > matches  <P 285   THR    >                        ( 15.7 A from   ZN    ZN P 702  )
         K  <A  60   LYS    > matches  <P 287   LYS    >                        ( 19.4 A from    C40 0W2 P 701  )
         E  <A 124   GLU    > matches  <P 510   GLU    >                        (  7.9 A from   ZN    ZN P 702  )
 
KERBm  3*FOUND in 3cb6  size =    3  ^    FACT COMPLEX SUBUNIT SPT16;                             #    1                            
  RMSD =     1.63 A
  TRANSFORM   -0.3607  0.2814  0.8892  0.7954  0.5907  0.1357  0.4871 -0.7562  0.4368    16.437   -22.329    22.740              
         T  <A  34   THR    > matches  <A  20   THR    > 
         K  <A  60   LYS    > matches  <A  23   LYS    > 
         E  <A 124   GLU    > matches  <A 178   GLU    > 
 
KERBm  3*FOUND in 2jke  size =    3  ^    ALPHA-GLUCOSIDASE (ALPHA-GLUCOSIDASE SUSB);             #    4                            
  RMSD =     1.63 A
  TRANSFORM   -0.2459 -0.8936 -0.3755 -0.0949  0.4078 -0.9081 -0.9646  0.1877  0.1851   104.893    65.948    27.081              
         T  <A  34   THR    > matches  <A 697   THR    >                        ( 28.2 A from    C2  EDO A1731  )
         K  <A  60   LYS    > matches  <A 699   LYS    >                        ( 33.1 A from    C2  EDO A1731  )
         E  <A 124   GLU    > matches  <A 691   GLU    >                        ( 26.0 A from    O2  EDO A1731  )
 
KERBm  3*FOUND in 4fgx  size =    3  ^    BETA-SECRETASE 1;                                       #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.6851  0.3684  0.6284  0.3714 -0.9188  0.1337 -0.6266 -0.1418  0.7663   -11.193     1.344    45.996              
         T  <A  34   THR    > matches  <A 377   THR    >                        (-18.4 A from    N2  URE A 504s )
         K  <A  60   LYS    > matches  <A 272   LYS    >                        (-20.9 A from    N2  URE A 504s )
         E  <A 124   GLU    > matches  <A 313   GLU    >                        ( 14.0 A from    N1  URE A 504  )
 
KERBm  3*FOUND in 4ezg  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.2125 -0.5980 -0.7728  0.8034 -0.3432  0.4865  0.5562  0.7243 -0.4075    39.661   -58.297    -5.160              
         T  <A  34   THR    > matches  <A 140   THR    >                        ( 16.7 A from    O2  SO4 A 301  )
         K  <A  60   LYS    > matches  <A 165   LYS    >                        ( 14.0 A from    O2  SO4 A 301  )
         E  <A 124   GLU    > matches  <A  68   GLU    >                        ( 24.9 A from    O3  SO4 A 301  )
 
KERBm  3*FOUND in 3av4  size =    3  ^    DNA (CYTOSINE-5)-METHYLTRANSFERASE 1;                   #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.2140  0.8939 -0.3940  0.4784 -0.4475 -0.7555  0.8517  0.0268  0.5234     6.975    18.826   -86.660              
         T  <A  34   THR    > matches  <A 866   THR    >                        ( 24.1 A from   ZN    ZN A2004  )
         K  <A  60   LYS    > matches  <A 836   LYS    >                        ( 24.8 A from   ZN    ZN A2004  )
         E  <A 124   GLU    > matches  <A 849   GLU    >                        ( 32.2 A from   ZN    ZN A2004  )
 
KERBm  3*FOUND in 4whe  size =    3  ^    PHAGE SHOCK PROTEIN A;                                  #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.4841  0.4847 -0.7285 -0.6994  0.7147  0.0107 -0.5259 -0.5043 -0.6849    67.843   -14.765    69.419              
         T  <A  34   THR    > matches  <A  58   THR    >                        ( 41.5 A from    C2  TRS A 201  )
         K  <A  60   LYS    > matches  <A  54   LYS    >                        ( 44.8 A from    C2  TRS A 201  )
         E  <A 124   GLU    > matches  <A  70   GLU    >                        ( 26.6 A from    C1  TRS A 201  )
 
KERBm  3*FOUND in 2nap  size =    3  ^    PROTEIN (PERIPLASMIC NITRATE REDUCTASE);                #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.2557  0.9179  0.3033 -0.5987  0.0959 -0.7952  0.7590  0.3850 -0.5251    13.566    21.781   -38.980              
         T  <A  34   THR    > matches  <A 628   THR    >                        (  6.9 A from    N18 MGD A 812  )
         K  <A  60   LYS    > matches  <A  49   LYS    >                        ( -3.0 A from    N19 MGD A 812s )
         E  <A 124   GLU    > matches  <A 453   GLU    >                        ( 12.4 A from    O3' MGD A 811  )
 
KERBm  3*FOUND in 5i1t  size =    3  ^    STAGE II SPORULATION PROTEIN D;                         #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.2832 -0.8505 -0.4432  0.4839  0.2723 -0.8317 -0.8280  0.4500 -0.3345    12.761    26.270   -17.619              
         T  <A  34   THR    > matches  <A 184   THR    >                        ( 12.6 A from   NA    NA A 402  )
         K  <A  60   LYS    > matches  <A 351   LYS    >                        ( 11.9 A from   NA    NA A 402  )
         E  <A 124   GLU    > matches  <A 206   GLU    >                        (  8.5 A from    O71 CTO A 404  )
 
KERBm  3*FOUND in 5z5c  size =    3  ^    CYSTEINE SYNTHASE;                                      #    3                            
  RMSD =     1.64 A
  TRANSFORM    0.6943  0.1872  0.6949 -0.3848  0.9125  0.1386  0.6082  0.3636 -0.7056     8.169   -16.923    -7.229              
         T  <A  34   THR    > matches  <A 132   THR    >                        (  3.6 A from    N   MLY A 133  )
         K  <A  60   LYS    > matches  <A 134+  LYS    >                        (  2.9 A from    O   MLY A 133  )
         E  <A 124   GLU    > matches  <A 228   GLU    >                        ( -5.7 A from    O   MLY A 303s )
 
KERBm  3*FOUND in 4r4x  size =    3  ^    PNGF-II;                                                #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.7382  0.2732  0.6167 -0.4300 -0.8950 -0.1183 -0.5197  0.3526 -0.7782    -8.303    34.212    18.077              
         T  <A  34   THR    > matches  <A 187   THR    >                        ( 31.5 A from   ZN    ZN A1001  )
         K  <A  60   LYS    > matches  <A 182   LYS    >                        ( 27.5 A from   ZN    ZN A1001  )
         E  <A 124   GLU    > matches  <A 334   GLU    >                        ( 28.9 A from   ZN    ZN A1002  )
 
KERBm  3*FOUND in 5ch5  size =    3  ^    CARBOXYLIC ESTER HYDROLASE;                             #    2                            
  RMSD =     1.64 A
  TRANSFORM   -0.1523  0.5268 -0.8362  0.9469  0.3202  0.0292 -0.2831  0.7874  0.5476     1.073   -17.747    46.499              
         T  <A  34   THR    > matches  <A 102   THR    >                        ( 16.8 A from    C3  DPF A 601  )
         K  <A  60   LYS    > matches  <A  10   LYS    >                        ( 18.4 A from    C3  DPF A 601  )
         E  <A 124   GLU    > matches  <A 109   GLU    >                        ( 22.5 A from    O4  DPF A 601  )
 
KERBm  3*FOUND in 5dl8  size =    3  ^    BENZOATE TRANSPORT PORIN BENP;                          #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.7472 -0.6392  0.1820  0.1806  0.4587  0.8700  0.6396  0.6172 -0.4582    50.866    21.300     3.084              
         T  <A  34   THR    > matches  <A 103   THR    >                        ( 17.6 A from    C2  C8E A 402  )
         K  <A  60   LYS    > matches  <A 105   LYS    >                        ( 19.0 A from    C1  C8E A 402  )
         E  <A 124   GLU    > matches  <A 166   GLU    >                        (  8.5 A from    C10 C8E A 402  )
 
KERBm  3*FOUND in 5zzw  size =    3  ^    PROTEIN ARGININE METHYLTRANSFERASE NDUFAF7 HOMOLOG,     #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.1566  0.8114 -0.5631  0.9727  0.0279 -0.2303  0.1712  0.5838  0.7936   -45.048    -3.604    12.850              
         T  <A  34   THR    > matches  <A 379   THR    >                        ( 16.8 A from    SD  SAH A 501  )
         K  <A  60   LYS    > matches  <A 124   LYS    >                        ( 15.9 A from    O2' SAH A 501  )
         E  <A 124   GLU    > matches  <A 324   GLU    >                        ( 16.4 A from    N7  SAH A 501  )
 
KERBm  3*FOUND in 4acc  size =    3  ^    GLYCOGEN SYNTHASE KINASE-3 BETA;                        #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.2235  0.6946 -0.6838  0.3348 -0.6042 -0.7231  0.9154  0.3906  0.0975    14.128     7.062   -14.961              
         T  <A  34   THR    > matches  <A  59   THR    >                        (  3.9 A from    C1  DMS A1386  )
         K  <A  60   LYS    > matches  <A  36   LYS    >                        (  6.4 A from    C1  DMS A1386  )
         E  <A 124   GLU    > matches  <A  97   GLU    >                        (  5.1 A from    N29 7YG A1387  )
 
KERBm  3*FOUND in 4nar  size =    3  ^    PUTATIVE URONATE ISOMERASE;                             #    3                            
  RMSD =     1.64 A
  TRANSFORM    0.3840  0.4735  0.7927  0.8856 -0.4317 -0.1711 -0.2612 -0.7677  0.5851    33.194    24.934    48.180              
         T  <A  34   THR    > matches  <A  75   THR    >                        ( 13.0 A from    O2  SO4 A 501  )
         K  <A  60   LYS    > matches  <A  77   LYS    >                        ( 18.2 A from    O2  SO4 A 501  )
         E  <A 124   GLU    > matches  <A 174   GLU    >                        ( 13.2 A from    O3  SO4 A 501  )
 
KERBm  3*FOUND in 5yww  size =    3  ^    NUCLEOTIDE BINDING PROTEIN PINC;                        #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.0332 -0.2769  0.9603  0.0789 -0.9571 -0.2787 -0.9963 -0.0850  0.0099   -21.350    76.052    13.624              
         T  <A  34   THR    > matches  <A 392   THR    >                        ( 32.5 A from    O1  GOL A 601  )
         K  <A  60   LYS    > matches  <A 394   LYS    >                        ( 32.9 A from    O1  GOL A 601  )
         E  <A 124   GLU    > matches  <A 249   GLU    >                        ( 25.6 A from    O1  GOL A 601  )
 
KERBm  3*FOUND in 4fa8  size =    3  ^    SECRETED PROTEIN BARF1;                                 #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.8735  0.4319 -0.2244  0.3662  0.8869  0.2817 -0.3207 -0.1639  0.9329    44.241     7.679    34.831              
         T  <A  34   THR    > matches  <A  22   THR    >                        ( 16.9 A from    C1  NAG A 301  )
         K  <A  60   LYS    > matches  <A  20+  LYS    >                        ( 18.1 A from    O6  NAG A 301  )
         E  <A 124   GLU    > matches  <A 209   GLU    >                        ( 28.7 A from    C8  NAG A 301  )
 
KERBm  3*FOUND in 3l3f  size =    3  ^    PROTEIN DOA1;                                           #    2                            
  RMSD =     1.64 A
  TRANSFORM    0.1084  0.5389  0.8353 -0.2142 -0.8079  0.5490 -0.9708  0.2385 -0.0278     3.233    36.744    43.764              
         T  <A  34   THR    > matches  <X 384   THR    > 
         K  <A  60   LYS    > matches  <X 377   LYS    > 
         E  <A 124   GLU    > matches  <X 476   GLU    > 
 
KERBm  3*FOUND in 4xlg  size =    3  ^    STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX4;           #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.1444 -0.3904  0.9092 -0.7291 -0.5792 -0.3645 -0.6690  0.7156  0.2010    13.109   -48.351   -19.927              
         T  <A  34   THR    > matches  <A 197   THR    >                        ( 13.8 A from   CL    CL A 404  )
         K  <A  60   LYS    > matches  <A 201   LYS    >                        ( 17.1 A from   CL    CL A 404  )
         E  <A 124   GLU    > matches  <A  61   GLU    >                        ( 16.1 A from   CL    CL A 403  )
 
KERBm  3*FOUND in 2vdj  size =    3  ^    HOMOSERINE O-SUCCINYLTRANSFERASE;                       #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.7763 -0.6198  0.1149 -0.3299 -0.5548 -0.7637 -0.5371 -0.5550  0.6352    33.681   -13.489    -3.460              
         T  <A  34   THR    > matches  <A 195   THR    >                        (  8.8 A from    O3  HSE A1298  )
         K  <A  60   LYS    > matches  <A 157   LYS    >                        ( 12.1 A from    O3  HSE A1298  )
         E  <A 124   GLU    > matches  <A  49   GLU    >                        (  9.1 A from    O2  SO4 A1297  )
 
KERBm  3*FOUND in 2gg2  size =    3  ^    METHIONINE AMINOPEPTIDASE;                              #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.6435  0.3118 -0.6991  0.4703  0.5596  0.6824 -0.6040  0.7679 -0.2134    13.798   -21.969    20.579              
         T  <A  34   THR    > matches  <A 200   THR    >                        ( 12.2 A from   CO    CO A 301  )
         K  <A  60   LYS    > matches  <A   6   LYS    >                        ( 13.0 A from   CO    CO A 301  )
         E  <A 124   GLU    > matches  <A  26   GLU    >                        ( 16.7 A from   CO    CO A 302  )
 
KERBm  3*FOUND in 4s3j  size =    3  ^    CORTICAL-LYTIC ENZYME;                                  #    3                            
  RMSD =     1.64 A
  TRANSFORM   -0.7025  0.5630 -0.4353  0.4931 -0.0560 -0.8682  0.5132  0.8246  0.2382    40.316   102.456    -9.885              
         T  <A  34   THR    > matches  <A 133   THR    >                        ( 24.3 A from    H21 EDO A 501  )
         K  <A  60   LYS    > matches  <A 429   LYS    >                        ( 28.7 A from    H21 EDO A 501  )
         E  <A 124   GLU    > matches  <A 384   GLU    >                        ( 21.9 A from    H21 EDO A 501  )
 
KERBm  3*FOUND in 5fxu  size =    3  ^    ENVELOPE POLYPROTEIN;                                   #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.5026  0.7747  0.3838  0.4351  0.1569 -0.8866  0.7470 -0.6126  0.2582    -4.205    39.593     2.370              
         T  <A  34   THR    > matches  <A 339   THR    >                        ( 13.0 A from    O5  NAG A1386  )
         K  <A  60   LYS    > matches  <A 364   LYS    >                        (  8.9 A from    O5  NAG A1386  )
         E  <A 124   GLU    > matches  <A 125   GLU    >                        ( 29.9 A from    C1  NAG A1386  )
 
KERBm  3*FOUND in 4paa  size =    3  ^    DIMETHYLGLYCINE DEHYDROGENASE;                          #    4                            
  RMSD =     1.64 A
  TRANSFORM   -0.0754  0.9884  0.1320  0.7076 -0.0402  0.7054 -0.7026 -0.1466  0.6964     9.445     0.855   -35.148              
         T  <A  34   THR    > matches  <A 848   THR    >                        ( 12.0 A from    OX1 THG A 902  )
         K  <A  60   LYS    > matches  <A 852   LYS    >                        ( 17.0 A from    OE2 THG A 902  )
         E  <A 124   GLU    > matches  <A 676   GLU    >                        ( -2.8 A from    N3  THG A 902s )
 
KERBm  3*FOUND in 1dqa  size =    3  ^    PROTEIN (HMG-COA REDUCTASE);                            #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.8543  0.5196 -0.0097 -0.3476  0.5574 -0.7540  0.3864 -0.6475 -0.6568     5.363    16.185    53.628              
         T  <A  34   THR    > matches  <A 636   THR    >                        ( 19.7 A from    O7N NAP A   1  )
         K  <A  60   LYS    > matches  <A 606   LYS    >                        ( 24.2 A from    O7N NAP A   1  )
         E  <A 124   GLU    > matches  <A 801   GLU    >                        (  8.5 A from    C5N NAP A   1  )
 
KERBm  3*FOUND in 1tg7  size =    3  ^    BETA-GALACTOSIDASE;                                     #    2                            
  RMSD =     1.64 A
  TRANSFORM   -0.5552 -0.5974  0.5786  0.8162 -0.5250  0.2412 -0.1596 -0.6062 -0.7791   -45.536   -77.792   141.820              
         T  <A  34   THR    > matches  <A 496   THR    >                        ( 11.3 A from   NA    NA A9002  )
         K  <A  60   LYS    > matches  <A 498   LYS    >                        (  7.7 A from   NA    NA A9002  )
         E  <A 124   GLU    > matches  <A 514   GLU    >                        (  7.7 A from    O3  MAN A3007  )
 
KERBm  3*FOUND in 3c6x  size =    3  ^    HYDROXYNITRILASE;                                       #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.2327 -0.3373 -0.9122 -0.1800  0.9366 -0.3005 -0.9557 -0.0943  0.2787    60.708   -33.484    24.162              
         T  <A  34   THR    > matches  <A 110   THR    >                        ( -2.7 A from    O1  SO4 A1003s )
         K  <A  60   LYS    > matches  <A 191   LYS    >                        (  6.7 A from    O2  SO4 A1003  )
         E  <A 124   GLU    > matches  <A 123   GLU    >                        (  6.8 A from    O1  SO4 A1005  )
 
KERBm  3*FOUND in 3k1d  size =    3  ^    1,4-ALPHA-GLUCAN-BRANCHING ENZYME;                      #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.7775  0.1197 -0.6174  0.5604  0.5774 -0.5938 -0.2853  0.8077  0.5160    46.306   -14.298    51.863              
         T  <A  34   THR    > matches  <A 225   THR    > 
         K  <A  60   LYS    > matches  <A 198   LYS    > 
         E  <A 124   GLU    > matches  <A 586   GLU    > 
 
KERBm  3*FOUND in 1vi2  size =    3  ^    SHIKIMATE 5-DEHYDROGENASE 2;                            #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.9179 -0.0961 -0.3850  0.3917  0.3752  0.8401 -0.0637  0.9219 -0.3821    18.598   -50.172   -50.939              
         T  <A  34   THR    > matches  <A  82   THR    >                        ( 16.1 A from    O3  SO4 A 299  )
         K  <A  60   LYS    > matches  <A  86   LYS    >                        ( 17.8 A from    O3  SO4 A 299  )
         E  <A 124   GLU    > matches  <A 117   GLU    >                        ( 16.1 A from    O7N NAD A 300  )
 
KERBm  3*FOUND in 2nvw  size =    3  ^    GALACTOSE/LACTOSE METABOLISM REGULATORY PROTEIN         #    1                            
  RMSD =     1.64 A
  TRANSFORM    0.3799  0.6717 -0.6359  0.2069 -0.7318 -0.6494  0.9016 -0.1151  0.4170    -6.161    62.836   -28.853              
         T  <A  34   THR    > matches  <A  56   THR    > 
         K  <A  60   LYS    > matches  <A  58   LYS    > 
         E  <A 124   GLU    > matches  <A 196   GLU    > 
 
KERBm  3*FOUND in 3ecq  size =    3  ^    ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE;                   #    3                            
  RMSD =     1.64 A
  TRANSFORM    0.5323  0.8410  0.0969  0.5664 -0.2687 -0.7791  0.6292 -0.4695  0.6194    -8.949     5.538    10.948              
         T  <A  34   THR    > matches  <A1368   THR    >                        ( 18.2 A from   CA    CA A2001  )
         K  <A  60   LYS    > matches  <A1366   LYS    >                        ( 14.7 A from   CA    CA A2001  )
         E  <A 124   GLU    > matches  <A1309   GLU    >                        ( 26.7 A from   CA    CA A2001  )
 
KERBm  3*FOUND in 2y65  size =    3  ^    KINESIN HEAVY CHAIN;                                    #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.6431  0.0833 -0.7613  0.7105 -0.3061 -0.6337  0.2858  0.9484 -0.1377    34.901   -57.497    10.422              
         T  <A  34   THR    > matches  <A  78   THR    >                        ( 25.6 A from    N6  ADP A 603  )
         K  <A  60   LYS    > matches  <A  74   LYS    >                        ( 20.9 A from    N6  ADP A 603  )
         E  <A 124   GLU    > matches  <A 225   GLU    >                        ( 43.5 A from    N6  ADP A 603  )
 
KERBm  3*FOUND in 4p0d  size =    3  ^    TRYPSIN-RESISTANT SURFACE T6 PROTEIN;                   #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.6598  0.3528  0.6635 -0.7157 -0.0261 -0.6979  0.2289  0.9353 -0.2697    20.032    -6.986   -89.446              
         T  <A  34   THR    > matches  <A 182   THR    >                        ( 22.4 A from    I   IOD A 602  )
         K  <A  60   LYS    > matches  <A 184   LYS    >                        ( 21.0 A from    I   IOD A 602  )
         E  <A 124   GLU    > matches  <A  47   GLU    >                        ( 14.4 A from   CA    CA A 604  )
 
KERBm  3*FOUND in 5j9t  size =    3  ^    HISTONE ACETYLTRANSFERASE ESA1;                         #    2                            
  RMSD =     1.64 A
  TRANSFORM   -0.6185  0.6712 -0.4085  0.6863  0.2083 -0.6969  0.3827  0.7114  0.5895    20.232   -54.166    44.616              
         T  <A  34   THR    > matches  <C 160   THR    >                        ( 29.9 A from    CE  ALY A 262  )
         K  <A  60   LYS    > matches  <A 217   LYS    >                        ( 27.5 A from    CE  ALY A 262  )
         E  <A 124   GLU    > matches  <C 269   GLU    >                        ( 47.6 A from    CE  ALY A 262  )
 
KERBm  3*FOUND in 1xwv  size =    3  ^    DER F II;                                               #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.6672  0.1793 -0.7230 -0.6653  0.2930  0.6866 -0.3350 -0.9391  0.0762    31.613   -11.977    27.295              
         T  <A  34   THR    > matches  <A 107   THR    >                        (  8.6 A from    O10 PE3 A1001  )
         K  <A  60   LYS    > matches  <A 109   LYS    >                        ( 11.4 A from    C15 PE3 A1001  )
         E  <A 124   GLU    > matches  <A 102   GLU    >                        ( 11.9 A from    O4  PE3 A1001  )
 
KERBm  3*FOUND in 4h18  size =    3  ^    CMT1;                                                   #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.1443  0.7041  0.6953  0.4609  0.6696 -0.5825  0.8757 -0.2364  0.4211     9.820   -47.114   -66.310              
         T  <A  34   THR    > matches  <A  91   THR    > 
         K  <A  60   LYS    > matches  <A  72   LYS    > 
         E  <A 124   GLU    > matches  <A 364   GLU    > 
 
KERBm  3*FOUND in 5e4g  size =    3  ^    GROWTH/DIFFERENTIATION FACTOR 11;                       #    1                            
  RMSD =     1.64 A
  TRANSFORM   -0.0471  0.1866 -0.9813 -0.9636 -0.2672 -0.0046  0.2630 -0.9454 -0.1924    17.803    -8.482    30.996              
         T  <A  34   THR    > matches  <A  77   THR    >                        ( 25.2 A from    C1  PG4 A 202  )
         K  <A  60   LYS    > matches  <A  54   LYS    >                        ( 24.6 A from    C1  PG4 A 202  )
         E  <A 124   GLU    > matches  <A   8   GLU    >                        ( 26.0 A from    C5  PG4 A 202  )
 
KERBm  3*FOUND in 1c4o  size =    3  ^    DNA NUCLEOTIDE EXCISION REPAIR ENZYME UVRB;             #    2                            
  RMSD =     1.65 A
  TRANSFORM   -0.2332 -0.0841 -0.9688  0.4198 -0.9073 -0.0223  0.8771  0.4119 -0.2469    53.329    72.437    -5.241              
         T  <A  34   THR    > matches  <A 410   THR    >                        (  8.3 A from    O4  SO4 A9001  )
         K  <A  60   LYS    > matches  <A  11   LYS    >                        ( 12.7 A from    O4  SO4 A9001  )
         E  <A 124   GLU    > matches  <A 543   GLU    >                        (  7.6 A from    O3  SO4 A9002  )
 
KERBm  3*FOUND in 5j72  size =    3  ^    PUTATIVE N-ACETYLMURAMOYL-L-ALANINE AMIDASE,AUTOLYS     #    1                            
  RMSD =     1.65 A
  TRANSFORM   -0.1583  0.2706 -0.9496  0.0695  0.9624  0.2626 -0.9849  0.0244  0.1711    16.853   -47.125    41.891              
         T  <A  34   THR    > matches  <A 588   THR    >                        ( 17.4 A from   CL    CL A 705  )
         K  <A  60   LYS    > matches  <A 559   LYS    >                        ( 19.5 A from   CL    CL A 705  )
         E  <A 124   GLU    > matches  <A 486   GLU    >                        ( -2.4 A from   ZN    ZN A 707s )
 
KERBm  3*FOUND in 1ldj  size =    3  ^    CULLIN HOMOLOG 1;                                       #    4                            
  RMSD =     1.65 A
  TRANSFORM   -0.5999 -0.7953  0.0875  0.4060 -0.2083  0.8898  0.6894 -0.5693 -0.4478    70.764   -29.678   -46.788              
         T  <A  34   THR    > matches  <A 580   THR    >                        ( 16.5 A from   ZN    ZN B 202  )
         K  <A  60   LYS    > matches  <A 578   LYS    >                        ( 16.8 A from   ZN    ZN B 202  )
         E  <A 124   GLU    > matches  <A 691   GLU    >                        ( 30.8 A from   ZN    ZN B 203  )
 
KERBm  3*FOUND in 3i5x  size =    3  ^    ATP-DEPENDENT RNA HELICASE MSS116;                      #    2                            
  RMSD =     1.65 A
  TRANSFORM   -0.5418  0.7682 -0.3410  0.0532 -0.3735 -0.9261  0.8388  0.5199 -0.1615    45.275    20.673   -54.231              
         T  <A  34   THR    > matches  <A 330   THR    >                        (  9.2 A from    O2B ANP A1000  )
         K  <A  60   LYS    > matches  <A 135   LYS    >                        ( 14.9 A from    O2B ANP A1000  )
         E  <A 124   GLU    > matches  <A 456   GLU    >                        ( 12.7 A from    O1G ANP A1000  )
 
KERBm  3*FOUND in 2flh  size =    3  ^    CYTOKININ-SPECIFIC BINDING PROTEIN;                     #    2                            
  RMSD =     1.65 A
  TRANSFORM   -0.1505 -0.8302 -0.5367  0.7937 -0.4251  0.4350  0.5894  0.3605 -0.7230    19.610   -32.289     5.411              
         T  <A  34   THR    > matches  <A  28   THR    >                        (  4.6 A from    C8  ZEA A 708  )
         K  <A  60   LYS    > matches  <A  32   LYS    >                        ( 10.8 A from    C8  ZEA A 708  )
         E  <A 124   GLU    > matches  <A  76   GLU    >                        (  9.9 A from    O16 ZEA A 708  )
 
KERBm  3*FOUND in 4fj6  size =    3  ^    GLYCOSIDE HYDROLASE FAMILY 33, CANDIDATE SIALIDASE;     #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.0361  0.6146  0.7880  0.0607  0.7857 -0.6156  0.9975 -0.0700  0.0089  -210.577   140.163   -70.475              
         T  <A  34   THR    > matches  <A 479   THR    >                        ( 15.4 A from    O3  GOL A 601  )
         K  <A  60   LYS    > matches  <A 481   LYS    >                        ( 18.2 A from    O3  PO4 A 607  )
         E  <A 124   GLU    > matches  <A  43   GLU    >                        (  5.3 A from    O2  PO4 A 606  )
 
KERBm  3*FOUND in 5ux9  size =    3  ^    CHLORAMPHENICOL ACETYLTRANSFERASE;                      #    1                            
  RMSD =     1.65 A
  TRANSFORM   -0.5375 -0.8300 -0.1489  0.3465 -0.0564 -0.9363 -0.7687  0.5549 -0.3180   146.390    55.804    53.246              
         T  <A  34   THR    > matches  <A  38   THR    >                        ( 20.3 A from    CH3 ACT A 304  )
         K  <A  60   LYS    > matches  <A   3+  LYS    >                        ( 24.1 A from    CH3 ACT A 303  )
         E  <A 124   GLU    > matches  <A  58   GLU    >                        ( 16.3 A from    CH3 ACT A 304  )
 
KERBm  3*FOUND in 3ogh  size =    3  ^    PROTEIN YCIE;                                           #    2                            
  RMSD =     1.65 A
  TRANSFORM   -0.7446 -0.4225 -0.5169 -0.6320  0.6955  0.3419 -0.2150 -0.5812  0.7848    40.644     6.293     5.548              
         T  <A  34   THR    > matches  <A 151   THR    >                        ( 17.1 A from   FE    FE A 401  )
         K  <A  60   LYS    > matches  <A 154   LYS    >                        ( 21.5 A from   FE    FE A 401  )
         E  <A 124   GLU    > matches  <A 137   GLU    >                        (  2.5 A from   MG    MG A 501s )
 
KERBm  3*FOUND in 4ewt  size =    3  ^    PEPTIDASE, M20/M25/M40 FAMILY;                          #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.2344  0.6676  0.7066  0.5624  0.4998 -0.6587  0.7930 -0.5518  0.2583    28.773    25.698   -45.267              
         T  <A  34   THR    > matches  <A 127   THR    >                        ( 31.7 A from   MN    MN A 402  )
         K  <A  60   LYS    > matches  <A  68   LYS    >                        ( 33.3 A from   MN    MN A 402  )
         E  <A 124   GLU    > matches  <A 305   GLU    >                        ( 27.2 A from   MN    MN A 402  )
 
KERBm  3*FOUND in 2oc5  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.4028  0.4229  0.8117  0.9133 -0.2441 -0.3260 -0.0603 -0.8727  0.4846   -41.464     5.267    27.918              
         T  <A  34   THR    > matches  <A  81   THR    >                        (  9.0 A from    O20 UNL A 304  )
         K  <A  60   LYS    > matches  <A  85   LYS    >                        ( 13.3 A from    O20 UNL A 304  )
         E  <A 124   GLU    > matches  <A 128   GLU    >                        (  1.9 A from   FE    FE A 302s )
 
KERBm  3*FOUND in 3b6h  size =    3  ^    PROSTACYCLIN SYNTHASE;                                  #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.4563  0.0761 -0.8866 -0.7895  0.4943 -0.3639 -0.4105 -0.8660 -0.2856    10.599    29.927    88.372              
         T  <A  34   THR    > matches  <A  55   THR    >                        ( 17.0 A from    C8' BOG A 701  )
         K  <A  60   LYS    > matches  <A  58   LYS    >                        ( 20.3 A from    C4' BOG A 701  )
         E  <A 124   GLU    > matches  <A 489   GLU    >                        ( 19.3 A from    C8' BOG A 701  )
 
KERBm  3*FOUND in 2e2r  size =    3  ^    ESTROGEN-RELATED RECEPTOR GAMMA;                        #    4                            
  RMSD =     1.65 A
  TRANSFORM   -0.8294 -0.5186 -0.2077  0.3593 -0.7799  0.5125  0.4277 -0.3505 -0.8332     8.630    -1.898   -12.049              
         T  <A  34   THR    > matches  <A 420   THR    >                        ( 17.2 A from    C12 2OH A1401  )
         K  <A  60   LYS    > matches  <A 355   LYS    >                        ( 17.0 A from    O1  2OH A1401  )
         E  <A 124   GLU    > matches  <A 397   GLU    >                        (  6.7 A from    O1  GOL A 503  )
 
KERBm  3*FOUND in 4tnd  size =    3  ^    G PROTEIN-COUPLED RECEPTOR KINASE 5;                    #    3                            
  RMSD =     1.65 A
  TRANSFORM    0.8234 -0.1417  0.5495 -0.1147 -0.9899 -0.0834 -0.5557 -0.0056  0.8313   -17.213   -22.062    22.359              
         T  <A  34   THR    > matches  <A 208   THR    >                        ( 17.4 A from    N6  ANP A 601  )
         K  <A  60   LYS    > matches  <A  26   LYS    >                        ( 22.9 A from    N1  ANP A 601  )
         E  <A 124   GLU    > matches  <A 239   GLU    >                        ( 17.0 A from    N6  ANP A 601  )
 
KERBm  3*FOUND in 3eph  size =    3  ^    TRNA ISOPENTENYLTRANSFERASE;                            #    2                            
  RMSD =     1.65 A
  TRANSFORM    0.8930 -0.1037 -0.4380 -0.2185 -0.9506 -0.2204  0.3936 -0.2925  0.8715    -6.966    49.199   -47.822              
         T  <A  34   THR    > matches  <A 118   THR    >                        ( 18.1 A from    O12 PPV A 422  )
         K  <A  60   LYS    > matches  <A 198   LYS    >                        ( 23.5 A from    O12 PPV A 422  )
         E  <A 124   GLU    > matches  <A  82   GLU    >                        ( 15.0 A from   MG    MG A   7  )
 
KERBm  3*FOUND in 2bma  size =    3  ^    GLUTAMATE DEHYDROGENASE (NADP+);                        #    2                            
  RMSD =     1.65 A
  TRANSFORM   -0.1399 -0.9830  0.1190  0.9831 -0.1522 -0.1015 -0.1179 -0.1028 -0.9877    22.220  -103.523    63.325              
         T  <A  34   THR    > matches  <A 192   THR    > 
         K  <A  60   LYS    > matches  <A 194   LYS    > 
         E  <A 124   GLU    > matches  <A 109   GLU    > 
 
KERBm  3*FOUND in 2w5q  size =    3  ^    PROCESSED GLYCEROL PHOSPHATE LIPOTEICHOIC ACID          #    1                            
  RMSD =     1.65 A
  TRANSFORM   -0.8006 -0.1872 -0.5692  0.0278 -0.9605  0.2768  0.5986 -0.2058 -0.7742    43.865    44.960    51.169              
         T  <A  34   THR    > matches  <A 501   THR    >                        ( 18.9 A from   MN    MN A1642  )
         K  <A  60   LYS    > matches  <A 573   LYS    >                        ( 23.0 A from   MN    MN A1642  )
         E  <A 124   GLU    > matches  <A 255   GLU    >                        ( -1.8 A from   MN    MN A1642s )
 
KERBm  3*FOUND in 6bt1  size =    3  ^    NOCTURNIN;                                              #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.8872  0.0436 -0.4593 -0.1637 -0.9010 -0.4017  0.4313 -0.4316  0.7923    48.105    -6.668    42.886              
         T  <A  34   THR    > matches  <A 330   THR    >                        ( 19.8 A from   MG    MG A 501  )
         K  <A  60   LYS    > matches  <A 335   LYS    >                        ( 22.8 A from   MG    MG A 501  )
         E  <A 124   GLU    > matches  <A 371   GLU    >                        ( 16.5 A from   MG    MG A 501  )
 
KERBm  3*FOUND in 1pzs  size =    3  ^    SUPEROXIDE DISMUTASE [CU-ZN];                           #    1                            
  RMSD =     1.65 A
  TRANSFORM   -0.0659  0.9761  0.2072 -0.2333  0.1868 -0.9543  0.9702  0.1112 -0.2154    -0.339    -7.006     9.521              
         T  <A  34   THR    > matches  <A  33   THR    >                        ( 17.4 A from   CU    CU A 172  )
         K  <A  60   LYS    > matches  <A  38   LYS    >                        ( 20.2 A from   CU    CU A 172  )
         E  <A 124   GLU    > matches  <A  21   GLU    >                        ( 23.8 A from   CU    CU A 172  )
 
KERBm  3*FOUND in 1di2  size =    3  ^    RNA (5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3');           #    1                            
  RMSD =     1.65 A
  TRANSFORM   -0.9093  0.2439  0.3371  0.4120  0.4144  0.8115 -0.0582 -0.8768  0.4773     4.580   -22.081     6.845              
         T  <A  34   THR    > matches  <A 176   THR    > 
         K  <A  60   LYS    > matches  <A 179   LYS    > 
         E  <A 124   GLU    > matches  <A 144   GLU    > 
 
KERBm  3*FOUND in 5nf3  size =    3  ^    MINOR FIMBRIUM SUBUNIT MFA1;                            #    1                            
  RMSD =     1.65 A
  TRANSFORM   -0.6720  0.0829  0.7359  0.0358  0.9962 -0.0796  0.7397  0.0272  0.6724   -14.774   -11.275    19.007              
         T  <A  34   THR    > matches  <A 233   THR    >                        ( 14.9 A from    OXT ACT A 602  )
         K  <A  60   LYS    > matches  <A 231   LYS    >                        ( 19.8 A from    OXT ACT A 602  )
         E  <A 124   GLU    > matches  <A 198   GLU    >                        ( 17.0 A from    OXT ACT A 602  )
 
KERBm  3*FOUND in 2bji  size =    3  ^    INOSITOL-1(OR 4)-MONOPHOSPHATASE;                       #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.9841 -0.0577  0.1679  0.1361  0.8526 -0.5045  0.1141 -0.5194 -0.8469   -36.283    23.712    26.228              
         T  <A  34   THR    > matches  <A1229   THR    >                        ( 18.7 A from   MG    MG A2278  )
         K  <A  60   LYS    > matches  <A1135   LYS    >                        ( 24.3 A from   MG    MG A2278  )
         E  <A 124   GLU    > matches  <A1213   GLU    >                        (  8.8 A from   MG    MG A2278  )
 
KERBm  3*FOUND in 4u6d  size =    3  ^    CONSERVED HYPOTHETICAL PERIPLASMIC PROTEIN;             #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.7022  0.4309  0.5668  0.5073  0.2558 -0.8229  0.4995 -0.8654  0.0390   -24.500   -50.197    75.054              
         T  <A  34   THR    > matches  <A  66   THR    >                        (  8.3 A from   CA    CA A 501  )
         K  <A  60   LYS    > matches  <A 385   LYS    >                        ( -2.8 A from    O1  EDO A 509s )
         E  <A 124   GLU    > matches  <A 285   GLU    >                        ( -3.8 A from    O1  3DY A 521s )
 
KERBm  3*FOUND in 5c3u  size =    3  ^    L-SERINE AMMONIA-LYASE;                                 #    1                            
  RMSD =     1.65 A
  TRANSFORM   -0.2270 -0.8843 -0.4081  0.5984  0.2040 -0.7748 -0.7684  0.4200 -0.4828    65.939    -5.954    51.252              
         T  <A  34   THR    > matches  <A 312   THR    >                        ( -3.1 A from    N1  PLP A 401s )
         K  <A  60   LYS    > matches  <A  52   LYS    >                        ( -1.5 A from    C4A PLP A 401s )
         E  <A 124   GLU    > matches  <A 272   GLU    >                        ( 20.7 A from    C2A PLP A 401  )
 
KERBm  3*FOUND in 3c5i  size =    3  ^    CHOLINE KINASE;                                         #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.2800  0.2905  0.9150  0.6119 -0.7884  0.0631 -0.7397 -0.5422  0.3985     2.165   -45.167   118.870              
         T  <A  34   THR    > matches  <A 227   THR    >                        ( 15.5 A from   MG    MG A 370  )
         K  <A  60   LYS    > matches  <A 230+  LYS    >                        ( 16.1 A from   MG    MG A 370  )
         E  <A 124   GLU    > matches  <A  27   GLU    >                        ( 24.0 A from   MG    MG A 370  )
 
KERBm  3*FOUND in 4nnr  size =    3  ^    PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP2;              #    1                            
  RMSD =     1.65 A
  TRANSFORM    0.8201 -0.3353  0.4637  0.4261 -0.1832 -0.8859 -0.3820 -0.9241  0.0074    21.079     0.888    55.029              
         T  <A  34   THR    > matches  <A  57   THR    >                        (  8.9 A from    O4  FK5 A 201  )
         K  <A  60   LYS    > matches  <A  59   LYS    >                        ( 12.3 A from    O4  FK5 A 201  )
         E  <A 124   GLU    > matches  <A  98   GLU    >                        ( 17.7 A from    C4  FK5 A 201  )
 
KERBm  3*FOUND in 2vdw  size =    3  ^    VACCINIA VIRUS CAPPING ENZYME D1 SUBUNIT;               #    2                            
  RMSD =     1.65 A
  TRANSFORM    0.8981  0.4375  0.0441 -0.2846  0.6547 -0.7003  0.3352 -0.6164 -0.7125    17.438    10.468    42.373              
         T  <A  34   THR    > matches  <A 725   THR    >                        ( 20.0 A from    SD  SAH A1846  )
         K  <A  60   LYS    > matches  <A 723   LYS    >                        ( 18.4 A from    C2  SAH A1846  )
         E  <A 124   GLU    > matches  <A 825   GLU    >                        ( 23.5 A from    O4  SO4 A1845  )
 
KERBm  3*FOUND in 2hoe  size =    3  ^    N-ACETYLGLUCOSAMINE KINASE;                             #    1                            
  RMSD =     1.65 A
  TRANSFORM   -0.4948  0.0408 -0.8681  0.7455 -0.4934 -0.4481  0.4466  0.8689 -0.2137    33.601    72.597    12.917              
         T  <A  34   THR    > matches  <A 366   THR    >                        ( 27.0 A from    K     K A 369  )
         K  <A  60   LYS    > matches  <A  48   LYS    >                        ( 32.0 A from    K     K A 369  )
         E  <A 124   GLU    > matches  <A 183   GLU    >                        (  9.3 A from    K     K A 369  )
 
KERBm  3*FOUND in 5luz  size =    3  ^    NEUROLYSIN, MITOCHONDRIAL;                              #    2                            
  RMSD =     1.65 A
  TRANSFORM    0.1331 -0.0699 -0.9886  0.8780  0.4711  0.0849 -0.4598  0.8793 -0.1241    35.960     2.963    29.874              
         T  <A  34   THR    > matches  <A 285   THR    >                        ( 15.3 A from   ZN    ZN A1001  )
         K  <A  60   LYS    > matches  <A 287   LYS    >                        ( 18.7 A from    C3  GOL A1003  )
         E  <A 124   GLU    > matches  <A 510   GLU    >                        (  7.9 A from   ZN    ZN A1001  )
 
KERBm  3*FOUND in 4iu6  size =    3  ^    METHIONINE AMINOPEPTIDASE 1;                            #    1                            
  RMSD =     1.66 A
  TRANSFORM    0.6582  0.0501 -0.7512  0.5637  0.6286  0.5358 -0.4991  0.7761 -0.3855    15.413   -39.480    -1.724              
         T  <A  34   THR    > matches  <A 260   THR    >                        ( 14.2 A from    O1  SO4 A 407  )
         K  <A  60   LYS    > matches  <A 256   LYS    >                        ( 14.9 A from    O1  SO4 A 407  )
         E  <A 124   GLU    > matches  <A 280   GLU    >                        ( 15.3 A from    O4  SO4 A 407  )
 
KERBm  3*FOUND in 3bb0  size =    3  ^    VANADIUM CHLOROPEROXIDASE;                              #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.2890 -0.9550 -0.0666 -0.7989  0.2022  0.5665  0.5275 -0.2169  0.8214    60.731    -9.255    15.322              
         T  <A  34   THR    > matches  <A 314   THR    >                        ( 24.2 A from    CB  CSO A  69  )
         K  <A  60   LYS    > matches  <A 316   LYS    >                        ( 20.0 A from    SG  CSO A  69  )
         E  <A 124   GLU    > matches  <A 485   GLU    >                        ( 14.8 A from    O3  PO3 A 800  )
 
KERBm  3*FOUND in 5iku  size =    3  ^    COLLAGENASE;                                            #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.5121 -0.7148 -0.4763  0.2316 -0.6489  0.7248  0.8271 -0.2609 -0.4978    18.655    19.779    21.783              
         T  <A  34   THR    > matches  <A 799   THR    >                        ( 15.1 A from   CA    CA A2004  )
         K  <A  60   LYS    > matches  <A 801   LYS    >                        ( 13.4 A from   CA    CA A2004  )
         E  <A 124   GLU    > matches  <A 941   GLU    >                        ( 28.1 A from   CA    CA A2002  )
 
KERBm  3*FOUND in 4oev  size =    3  ^    PUTATIVE PEPTIDE ABC-TRANSPORT SYSTEM PERIPLASMIC P     #    1                            
  RMSD =     1.66 A
  TRANSFORM    0.2597 -0.6476 -0.7164  0.9068  0.4187 -0.0497 -0.3322  0.6367 -0.6959    41.049    33.144    -6.195              
         T  <A  34   THR    > matches  <A 121   THR    >                        ( 18.6 A from    O3  GOL A 503  )
         K  <A  60   LYS    > matches  <A 119   LYS    >                        ( 23.4 A from    O3  GOL A 503  )
         E  <A 124   GLU    > matches  <A 436   GLU    >                        ( 19.2 A from    O3  GOL A 503  )
 
KERBm  3*FOUND in 5n6n  size =    3  ^    PROTEIN BMH1;                                           #    2                            
  RMSD =     1.66 A
  TRANSFORM    0.1832 -0.9269  0.3276  0.9496  0.2530  0.1851  0.2544 -0.2772 -0.9265    32.314    41.795    42.999              
         T  <A  34   THR    > matches  <C 160   THR    >                        ( 12.7 A from   CA    CA C 801  )
         K  <A  60   LYS    > matches  <C 163   LYS    >                        ( 16.8 A from   CA    CA C 801  )
         E  <A 124   GLU    > matches  <C 124   GLU    >                        (  8.6 A from   CA    CA C 801  )
 
KERBm  3*FOUND in 2fco  size =    3  ^    RECOMBINATION PROTEIN U (PENICILLIN-BINDING PROTEIN     #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.6849 -0.2714 -0.6761 -0.6659 -0.1434  0.7321  0.2957 -0.9517  0.0826   120.200   -70.471    37.113              
         T  <A  34   THR    > matches  <A  85   THR    >                        (  5.8 A from   MG    MG A 701  )
         K  <A  60   LYS    > matches  <A  55   LYS    >                        (  8.3 A from   MG    MG A 701  )
         E  <A 124   GLU    > matches  <A 160   GLU    >                        ( 16.9 A from   MG    MG A 701  )
 
KERBm  3*FOUND in 5t1a  size =    3  ^    CHIMERA PROTEIN OF CC CHEMOKINE RECEPTOR TYPE 2 ISO     #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.1634  0.7655  0.6224 -0.9750 -0.2216  0.0167 -0.1507  0.6041 -0.7825   -88.238     7.424   131.835              
         T  <A  34   THR    > matches  <A 179   THR    >                        (  4.3 A from    C42 73R A1201  )
         K  <A  60   LYS    > matches  <A 114   LYS    >                        (  6.4 A from    N   YCM A 181  )
         E  <A 124   GLU    > matches  <A 270   GLU    >                        ( 17.1 A from    C18 73R A1201  )
 
KERBm  3*FOUND in 1w2p  size =    3  ^    ENDO-1,4-BETA-XYLANASE A PRECURSOR;                     #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.5193  0.7472  0.4148  0.4525  0.6522 -0.6082  0.7250  0.1282  0.6767     0.100   -23.084   -24.010              
         T  <A  34   THR    > matches  <A 183   THR    >                        ( 23.2 A from   CA  A CA A1348  )
         K  <A  60   LYS    > matches  <A 189   LYS    >                        ( 21.5 A from   CA  A CA A1348  )
         E  <A 124   GLU    > matches  <A 175   GLU    >                        ( 37.3 A from   CA  A CA A1348  )
 
KERBm  3*FOUND in 4ge6  size =    3  ^    TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 9;       #    2                            
  RMSD =     1.66 A
  TRANSFORM    0.8665 -0.2144  0.4508  0.4961  0.4705 -0.7298  0.0556 -0.8560 -0.5140    27.507    -5.901    34.044              
         T  <A  34   THR    > matches  <A 461   THR    >                        ( 21.7 A from    O2  B26 A 601  )
         K  <A  60   LYS    > matches  <A 444   LYS    >                        ( 24.4 A from    O1  B26 A 601  )
         E  <A 124   GLU    > matches  <A 454   GLU    >                        ( 30.7 A from    O3  B26 A 601  )
 
KERBm  3*FOUND in 5k0w  size =    3  ^    CLASS B CARBAPENEMASE GOB-18;                           #    1                            
  RMSD =     1.66 A
  TRANSFORM    0.2801  0.8980  0.3394 -0.5113  0.4388 -0.7390  0.8125 -0.0335 -0.5820    19.534    11.271    31.492              
         T  <A  34   THR    > matches  <A 166   THR    >                        ( 20.7 A from   CL    CL A 307  )
         K  <A  60   LYS    > matches  <A 159   LYS    >                        ( 16.6 A from   CL    CL A 304  )
         E  <A 124   GLU    > matches  <A 189   GLU    >                        ( 22.4 A from    C3  GOL A 310  )
 
KERBm  3*FOUND in 2vsq  size =    3  ^    SURFACTIN SYNTHETASE SUBUNIT 3;                         #    2                            
  RMSD =     1.66 A
  TRANSFORM   -0.5649  0.7975 -0.2119 -0.3628 -0.0094  0.9318 -0.7411 -0.6032 -0.2947   -17.337     2.339   -28.233              
         T  <A  34   THR    > matches  <A 213   THR    >                        ( 30.2 A from    CB  LEU A2291  )
         K  <A  60   LYS    > matches  <A 347   LYS    >                        ( 33.5 A from    CB  LEU A2291  )
         E  <A 124   GLU    > matches  <A 793   GLU    >                        ( 25.7 A from    CB  LEU A2291  )
 
KERBm  3*FOUND in 5na1  size =    3  ^    NADH DEHYDROGENASE-LIKE PROTEIN SAOUHSC_00878;          #    2                            
  RMSD =     1.66 A
  TRANSFORM    0.2561 -0.9571  0.1354  0.9221  0.1998 -0.3313 -0.2901 -0.2097 -0.9338    31.030   -21.243   -13.389              
         T  <A  34   THR    > matches  <A 258   THR    >                        ( 15.9 A from    O3  PO4 A1002  )
         K  <A  60   LYS    > matches  <A 144   LYS    >                        ( 18.0 A from    O3  PO4 A1002  )
         E  <A 124   GLU    > matches  <A 201   GLU    >                        ( 14.7 A from    C8  FAD A1001  )
 
KERBm  3*FOUND in 2yve  size =    3  ^    TRANSCRIPTIONAL REGULATOR;                              #    1                            
  RMSD =     1.66 A
  TRANSFORM    0.0183  0.9941 -0.1068 -0.4973  0.1017  0.8616 -0.8674 -0.0373 -0.4962   -11.092   -18.552    31.812              
         T  <A  34   THR    > matches  <A   3   THR    >                        ( 15.1 A from    O2  GOL A2004  )
         K  <A  60   LYS    > matches  <A   1+  LYS    >                        ( 19.9 A from    O2  GOL A2004  )
         E  <A 124   GLU    > matches  <A  90   GLU    >                        (  4.6 A from    C16 MBT A1001  )
 
KERBm  3*FOUND in 4jps  size =    3  ^    PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE 3-KINASE CATA     #    3                            
  RMSD =     1.66 A
  TRANSFORM   -0.2816  0.8230  0.4934  0.3884 -0.3724  0.8429 -0.8774 -0.4289  0.2147     4.458   -31.702   -32.759              
         T  <A  34   THR    > matches  <B 369   THR    >                        ( 37.6 A from    S   SCN A1101  )
         K  <A  60   LYS    > matches  <B 367+  LYS    >                        ( 37.2 A from    S   SCN A1101  )
         E  <A 124   GLU    > matches  <A 365   GLU    >                        ( 40.9 A from    C12 1LT A1102  )
 
KERBm  3*FOUND in 4fca  size =    3  ^    CONSERVED DOMAIN PROTEIN;                               #    2                            
  RMSD =     1.66 A
  TRANSFORM   -0.1786 -0.0885  0.9799 -0.2933  0.9555  0.0328  0.9392  0.2815  0.1966   -24.056   -27.946    14.283              
         T  <A  34   THR    > matches  <A 415   THR    >                        ( 28.5 A from   NI    NI A 602  )
         K  <A  60   LYS    > matches  <A 418   LYS    >                        ( 29.8 A from   NI    NI A 602  )
         E  <A 124   GLU    > matches  <A 339   GLU    >                        ( 21.9 A from    C2  IMD A 601  )
 
KERBm  3*FOUND in 4ffb  size =    3  ^    TUBULIN ALPHA-1 CHAIN;                                  #    1                            
  RMSD =     1.66 A
  TRANSFORM    0.5256 -0.5593 -0.6410 -0.8254 -0.1526 -0.5435 -0.2062 -0.8148  0.5419    46.935   -15.603    20.939              
         T  <A  34   THR    > matches  <C  65   THR    > 
         K  <A  60   LYS    > matches  <C 110   LYS    > 
         E  <A 124   GLU    > matches  <C  16   GLU    > 
 
KERBm  3*FOUND in 2xnj  size =    3  ^    FERREDOXIN NADP-H REDUCTASE;                            #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.7521  0.6379  0.1655  0.4557  0.6848 -0.5687  0.4761  0.3523  0.8057    59.777   -33.216   -11.095              
         T  <A  34   THR    > matches  <A  23   THR    >                        (  7.2 A from   ZN    ZN A1263  )
         K  <A  60   LYS    > matches  <A  11   LYS    >                        ( 11.3 A from   ZN    ZN A1263  )
         E  <A 124   GLU    > matches  <A 254   GLU    >                        (  4.0 A from    C7M FAD A1257  )
 
KERBm  3*FOUND in 5b1a  size =    3  ^    CYTOCHROME C OXIDASE SUBUNIT 1;                         #    2                            
  RMSD =     1.66 A
  TRANSFORM   -0.1241  0.8724  0.4727 -0.3403 -0.4850  0.8056 -0.9321  0.0609 -0.3571  -321.816   -34.692   137.744              
         T  <A  34   THR    > matches  <B  53   THR    >                        ( 10.3 A from    C21 PSC B 304  )
         K  <A  60   LYS    > matches  <A 264   LYS    >                        (  7.9 A from    C26 PSC B 304  )
         E  <A 124   GLU    > matches  <E  44   GLU    >                        (  9.7 A from    C06 PSC B 304  )
 
KERBm  3*FOUND in 2c12  size =    3  ^    NITROALKANE OXIDASE;                                    #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.6695  0.1281 -0.7317  0.2313  0.9720 -0.0415 -0.7059  0.1970  0.6804   262.956   -53.128   -81.634              
         T  <A  34   THR    > matches  <A  23   THR    >                        ( 25.1 A from    C7M FAD A1432  )
         K  <A  60   LYS    > matches  <A  27   LYS    >                        ( 26.1 A from    C7M FAD A1432  )
         E  <A 124   GLU    > matches  <A  71   GLU    >                        ( -9.7 A from    C1  GOL A1433s )
 
KERBm  3*FOUND in 2ww8  size =    3  ^    CELL WALL SURFACE ANCHOR FAMILY PROTEIN;                #    2                            
  RMSD =     1.66 A
  TRANSFORM   -0.0803  0.6254 -0.7761 -0.7445  0.4801  0.4639 -0.6628 -0.6151 -0.4270    72.018   -65.792    47.137              
         T  <A  34   THR    > matches  <A 588   THR    >                        ( 28.5 A from   CA    CA A1001  )
         K  <A  60   LYS    > matches  <A 590   LYS    >                        ( 29.4 A from    C6  EPE A1101  )
         E  <A 124   GLU    > matches  <A 564   GLU    >                        ( 21.8 A from   CA    CA A1001  )
 
KERBm  3*FOUND in 4ar9  size =    3  ^    COLLAGENASE COLT;                                       #    4                            
  RMSD =     1.66 A
  TRANSFORM   -0.5868 -0.1925 -0.7865 -0.7108 -0.3429  0.6142  0.3879 -0.9194 -0.0644     9.691    10.048    15.746              
         T  <A  34   THR    > matches  <A 613   THR    >                        ( 21.3 A from   ZN    ZN A1731  )
         K  <A  60   LYS    > matches  <A 517   LYS    >                        ( 22.5 A from   ZN    ZN A1731  )
         E  <A 124   GLU    > matches  <A 373   GLU    >                        ( 25.7 A from   ZN    ZN A1731  )
 
KERBm  3*FOUND in 2fna  size =    3  ^    CONSERVED HYPOTHETICAL PROTEIN;                         #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.0468  0.9922  0.1158  0.9791  0.0226  0.2021 -0.1979 -0.1228  0.9725   -31.333   -31.387   -16.256              
         T  <A  34   THR    > matches  <A  40   THR    >                        ( -4.5 A from    O1B ADP A 500s )
         K  <A  60   LYS    > matches  <A  42   LYS    >                        ( -2.9 A from    O1B ADP A 500s )
         E  <A 124   GLU    > matches  <A 232   GLU    >                        ( 18.7 A from    N6  ADP A 500  )
 
KERBm  3*FOUND in 5zzw  size =    3  ^    PROTEIN ARGININE METHYLTRANSFERASE NDUFAF7 HOMOLOG,     #    2                            
  RMSD =     1.66 A
  TRANSFORM   -0.5263 -0.7236  0.4467  0.1446 -0.5938 -0.7915 -0.8379  0.3520 -0.4171    82.324    13.811   -25.685              
         T  <A  34   THR    > matches  <A 208   THR    >                        (  8.8 A from    O3' SAH A 501  )
         K  <A  60   LYS    > matches  <A 129   LYS    >                        ( 14.0 A from    O   SAH A 501  )
         E  <A 124   GLU    > matches  <A 245   GLU    >                        ( 10.2 A from    C2  SAH A 501  )
 
KERBm  3*FOUND in 5v3h  size =    3  ^    N-LYSINE METHYLTRANSFERASE SMYD2;                       #    1                            
  RMSD =     1.66 A
  TRANSFORM    0.4490 -0.6815  0.5779  0.7139  0.6625  0.2267  0.5374 -0.3108 -0.7840    24.538    32.521    46.452              
         T  <A  34   THR    > matches  <A  57   THR    >                        (  5.3 A from   ZN    ZN A 503  )
         K  <A  60   LYS    > matches  <A  59   LYS    >                        (  8.3 A from   ZN    ZN A 503  )
         E  <A 124   GLU    > matches  <A   4   GLU    >                        ( 14.1 A from    O1  EDO A 509  )
 
KERBm  3*FOUND in 3cpg  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.5249  0.3749  0.7642 -0.2380 -0.9266  0.2911 -0.8172  0.0291 -0.5756    -5.999    36.301    30.871              
         T  <A  34   THR    > matches  <A  58   THR    >                        (  9.6 A from    O   ACT A 301  )
         K  <A  60   LYS    > matches  <A  10   LYS    >                        ( 13.5 A from    O   ACT A 301  )
         E  <A 124   GLU    > matches  <A 166   GLU    >                        ( 14.7 A from    CH3 ACT A 301  )
 
KERBm  3*FOUND in 4xqk  size =    3  ^    LLABIII;                                                #    1                            
  RMSD =     1.66 A
  TRANSFORM    0.2787 -0.9117  0.3020  0.8404  0.3837  0.3827  0.4648 -0.1472 -0.8731    60.210   -61.640   101.228              
         T  <A  34   THR    > matches  <A 847   THR    >                        ( 24.0 A from    K     K A1602  )
         K  <A  60   LYS    > matches  <A 851   LYS    >                        ( 28.8 A from    K     K A1602  )
         E  <A 124   GLU    > matches  <A 958   GLU    >                        ( 13.0 A from    K     K A1602  )
 
KERBm  3*FOUND in 3u7q  size =    3  ^    NITROGENASE MOLYBDENUM-IRON PROTEIN ALPHA CHAIN;        #    2                            
  RMSD =     1.66 A
  TRANSFORM    0.3626 -0.8290 -0.4258 -0.7951 -0.0368 -0.6053 -0.4861 -0.5580  0.6725    49.451    44.779   -13.352              
         T  <A  34   THR    > matches  <B 119   THR    >                        ( 10.3 A from    N1  IMD B 525  )
         K  <A  60   LYS    > matches  <A  51   LYS    >                        ( 11.6 A from    N1  IMD B 525  )
         E  <A 124   GLU    > matches  <A 164   GLU    >                        ( 11.1 A from    N3  IMD B 525  )
 
KERBm  3*FOUND in 1dp4  size =    3  ^    ATRIAL NATRIURETIC PEPTIDE RECEPTOR A;                  #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.3061  0.9518 -0.0215  0.7726  0.2351 -0.5898  0.5563  0.1971  0.8073  -116.741   -43.615   -29.397              
         T  <A  34   THR    > matches  <A  45   THR    >                        ( 26.1 A from   CL    CL A 610  )
         K  <A  60   LYS    > matches  <A  35   LYS    >                        ( 27.5 A from   CL    CL A 610  )
         E  <A 124   GLU    > matches  <A  75   GLU    >                        ( 18.0 A from   CL    CL A 610  )
 
KERBm  3*FOUND in 5foc  size =    3  ^    LEUCYL-TRNA SYNTHETASE;                                 #    1                            
  RMSD =     1.66 A
  TRANSFORM    0.9967 -0.0758  0.0290  0.0603  0.9308  0.3604  0.0543  0.3575 -0.9323     7.786   -57.270   116.298              
         T  <A  34   THR    > matches  <A 558   THR    > 
         K  <A  60   LYS    > matches  <A 560   LYS    > 
         E  <A 124   GLU    > matches  <A 626   GLU    > 
 
KERBm  3*FOUND in 1g99  size =    3  ^    ACETATE KINASE;                                         #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.1847 -0.4648 -0.8659  0.9581 -0.2815 -0.0532  0.2190  0.8395 -0.4973    97.583   -19.260    11.405              
         T  <A  34   THR    > matches  <A 226   THR    >                        ( 12.4 A from    O3  SO4 A 409  )
         K  <A  60   LYS    > matches  <A 176   LYS    >                        ( 16.5 A from    O3  SO4 A 409  )
         E  <A 124   GLU    > matches  <A 334   GLU    >                        (  6.3 A from    O2B ADP A 410  )
 
KERBm  3*FOUND in 3zrd  size =    3  ^    THIOL PEROXIDASE;                                       #    2                            
  RMSD =     1.66 A
  TRANSFORM   -0.6763 -0.2288  0.7002 -0.1432  0.9732  0.1797  0.7226 -0.0213  0.6910    11.806   -17.360    10.764              
         T  <A  34   THR    > matches  <A 131   THR    > 
         K  <A  60   LYS    > matches  <A 115   LYS    > 
         E  <A 124   GLU    > matches  <A  98   GLU    > 
 
KERBm  3*FOUND in 4bg2  size =    3  ^    PATF;                                                   #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.4737 -0.2744 -0.8368 -0.8225  0.4776  0.3089 -0.3149 -0.8346  0.4520    66.645     2.638    52.817              
         T  <A  34   THR    > matches  <A 147   THR    > 
         K  <A  60   LYS    > matches  <A 116   LYS    > 
         E  <A 124   GLU    > matches  <A 165   GLU    > 
 
KERBm  3*FOUND in 3gd8  size =    3  ^    AQUAPORIN-4;                                            #    1                            
  RMSD =     1.66 A
  TRANSFORM   -0.1075  0.8717 -0.4781 -0.3240  0.4239  0.8458 -0.9399 -0.2458 -0.2369    45.788    -3.709    33.586              
         T  <A  34   THR    > matches  <A 107   THR    >                        ( 18.4 A from    C2  GOL A   4  )
         K  <A  60   LYS    > matches  <A 109   LYS    >                        ( 14.9 A from    C2  GOL A   4  )
         E  <A 124   GLU    > matches  <A 163   GLU    >                        (  8.9 A from    O3  GOL A   6  )
 
KERBm  3*FOUND in 5b74  size =    3  ^    L-ASPARAGINASE;                                         #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.2868 -0.8247  0.4874 -0.3045 -0.4039 -0.8626 -0.9083  0.3958  0.1353    30.786   -14.454   -19.793              
         T  <A  34   THR    > matches  <A  83   THR    >                        ( -3.2 A from    OA2 FLC A 201s )
         K  <A  60   LYS    > matches  <A 154   LYS    >                        (  4.5 A from    CA  FLC A 201  )
         E  <A 124   GLU    > matches  <A  29   GLU    >                        ( 17.4 A from    OB1 FLC A 201  )
 
KERBm  3*FOUND in 3nt1  size =    3  ^    PROSTAGLANDIN-ENDOPEROXIDE SYNTHASE 2;                  #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.4987  0.8662  0.0327  0.1583 -0.1282  0.9790 -0.8522  0.4830  0.2010    76.874    24.729     4.995              
         T  <A  34   THR    > matches  <A 129   THR    >                        ( 16.4 A from    O5  NAG A 671  )
         K  <A  60   LYS    > matches  <A 137   LYS    >                        ( 19.5 A from    C1  NAG A 661  )
         E  <A 124   GLU    > matches  <A 524   GLU    >                        (  4.1 A from    C5  BOG A   6  )
 
KERBm  3*FOUND in 4h0p  size =    3  ^    ACETATE KINASE;                                         #    2                            
  RMSD =     1.67 A
  TRANSFORM   -0.2664 -0.3694 -0.8903  0.3727 -0.8913  0.2583  0.8889  0.2630 -0.3751    48.961    -3.340    19.479              
         T  <A  34   THR    > matches  <A 238   THR    > 
         K  <A  60   LYS    > matches  <A 188   LYS    > 
         E  <A 124   GLU    > matches  <A 364   GLU    > 
 
KERBm  3*FOUND in 3aoe  size =    3  ^    GLUTAMATE DEHYDROGENASE;                                #    2                            
  RMSD =     1.67 A
  TRANSFORM   -0.1601 -0.9674  0.1964 -0.4565  0.2490  0.8542  0.8752 -0.0471  0.4814    77.568     8.230   -25.769              
         T  <A  34   THR    > matches  <A  20   THR    >                        ( 18.4 A from    CD2 LEU A 500  )
         K  <A  60   LYS    > matches  <A  41   LYS    >                        ( 18.0 A from    CD2 LEU A 500  )
         E  <A 124   GLU    > matches  <A 322   GLU    >                        ( 28.7 A from    CD2 LEU A 500  )
 
KERBm  3*FOUND in 4h2g  size =    3  ^    5'-NUCLEOTIDASE;                                        #    2                            
  RMSD =     1.67 A
  TRANSFORM   -0.2639 -0.9574 -0.1174 -0.2644  0.1889 -0.9457 -0.9276  0.2185  0.3030    58.141    32.705    27.993              
         T  <A  34   THR    > matches  <A 430   THR    >                        ( 18.8 A from    O2' ADN A 603  )
         K  <A  60   LYS    > matches  <A 433   LYS    >                        ( 20.8 A from    O2' ADN A 603  )
         E  <A 124   GLU    > matches  <A 224   GLU    >                        ( -5.5 A from   CL    CL A 605s )
 
KERBm  3*FOUND in 3zyi  size =    3  ^    LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4;               #    2                            
  RMSD =     1.67 A
  TRANSFORM    0.2657  0.6631  0.6998 -0.9596  0.2514  0.1262  0.0923  0.7051 -0.7031    15.057   -26.057     1.356              
         T  <A  34   THR    > matches  <A 136   THR    >                        ( 39.3 A from    O1  PO4 A1443  )
         K  <A  60   LYS    > matches  <A 183   LYS    >                        ( 35.6 A from    O1  PO4 A1443  )
         E  <A 124   GLU    > matches  <A 144   GLU    >                        ( 48.4 A from    O2  PO4 A1443  )
 
KERBm  3*FOUND in 1q25  size =    3  ^    CATION-INDEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR;        #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.6088  0.2765 -0.7436  0.7213 -0.5831  0.3737  0.3303  0.7639  0.5544    59.993   -31.595   -43.881              
         T  <A  34   THR    > matches  <A  16   THR    >                        ( 21.5 A from    C8  NAG A1001  )
         K  <A  60   LYS    > matches  <A  29   LYS    >                        ( 23.7 A from    C8  NAG A2001  )
         E  <A 124   GLU    > matches  <A 229   GLU    >                        ( 35.3 A from    O1  GOL A4005  )
 
KERBm  3*FOUND in 3snf  size =    3  ^    PROTEIN P-30;                                           #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.7981  0.4512  0.3994  0.5342  0.8364  0.1227  0.2787 -0.3113  0.9085    13.009   -28.095    15.085              
         T  <A  34   THR    > matches  <A  35   THR    >                        (  8.9 A from    O2  SO4 A 105  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        (  9.2 A from    O2  SO4 A 105  )
         E  <A 124   GLU    > matches  <A  42   GLU    >                        ( -6.2 A from    O1  SO4 A 106s )
 
KERBm  3*FOUND in 3iag  size =    3  ^    5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*AP*CP*AP*CP*GP*AP*T)-     #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.2839 -0.9451 -0.1621 -0.4789  0.0067 -0.8779 -0.8307 -0.3268  0.4507    60.730    25.534    14.532              
         T  <A  34   THR    > matches  <C 153   THR    >                        (  9.8 A from    O1  EDO C   1  )
         K  <A  60   LYS    > matches  <C  90   LYS    >                        (  7.6 A from    O1  EDO C   1  )
         E  <A 124   GLU    > matches  <C 144   GLU    >                        ( 20.2 A from    O1  EDO C   2  )
 
KERBm  3*FOUND in 3liu  size =    3  ^    PUTATIVE CELL ADHESION PROTEIN;                         #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.5456  0.4711 -0.6931 -0.7093 -0.7000  0.0826  0.4463 -0.5367 -0.7161    60.356    30.386    59.306              
         T  <A  34   THR    > matches  <A 145   THR    >                        ( 14.1 A from    O2  GOL A   5  )
         K  <A  60   LYS    > matches  <A 142   LYS    >                        ( 14.3 A from    O2  GOL A   5  )
         E  <A 124   GLU    > matches  <A 237   GLU    >                        ( 27.1 A from    O1  GOL A   5  )
 
KERBm  3*FOUND in 5abh  size =    3  ^    O-GLCNACASE BT_4395;                                    #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.4834 -0.8243 -0.2947  0.6937 -0.5661  0.4454  0.5340 -0.0109 -0.8454   158.890  -100.405   201.907              
         T  <A  34   THR    > matches  <A 295   THR    >                        ( 19.3 A from    C15 YWN A1717  )
         K  <A  60   LYS    > matches  <A 331   LYS    >                        ( 21.4 A from    C15 YWN A1717  )
         E  <A 124   GLU    > matches  <A 247   GLU    >                        ( 20.7 A from    C9  YWN A1717  )
 
KERBm  3*FOUND in 2z0j  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN TTHA1438;              #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.1992  0.9412 -0.2730 -0.9550 -0.1241  0.2692 -0.2195 -0.3144 -0.9236    25.269    -2.055   110.451              
         T  <A  34   THR    > matches  <A  97   THR    >                        ( -3.7 A from    C3  MES A 301s )
         K  <A  60   LYS    > matches  <A 101   LYS    >                        (  9.9 A from    C3  MES A 301  )
         E  <A 124   GLU    > matches  <A 206   GLU    >                        ( 12.2 A from    O2S MES A 301  )
 
KERBm  3*FOUND in 4upi  size =    3  ^    SULFATASE FAMILY PROTEIN;                               #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.3235  0.2692  0.9071 -0.9462 -0.0881 -0.3113  0.0039  0.9590 -0.2833    18.854    30.505    25.786              
         T  <A  34   THR    > matches  <A 188   THR    >                        ( 23.6 A from   ZN    ZN A1576  )
         K  <A  60   LYS    > matches  <A 192   LYS    >                        ( 25.0 A from   ZN    ZN A1576  )
         E  <A 124   GLU    > matches  <A 275   GLU    >                        ( 15.6 A from    N  ADDZ A  53  )
 
KERBm  3*FOUND in 4rsw  size =    3  ^    HOPA1;                                                  #    2                            
  RMSD =     1.67 A
  TRANSFORM    0.0537  0.0775  0.9955 -0.2492 -0.9644  0.0885 -0.9670  0.2529  0.0325    33.019   -12.317    37.711              
         T  <A  34   THR    > matches  <A 250   THR    > 
         K  <A  60   LYS    > matches  <A 254   LYS    > 
         E  <A 124   GLU    > matches  <A 172   GLU    > 
 
KERBm  3*FOUND in 1uzb  size =    3  ^    1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE;                #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.5247 -0.8504 -0.0372 -0.8274 -0.4993 -0.2573 -0.2002 -0.1658  0.9656    59.878    70.857   -48.278              
         T  <A  34   THR    > matches  <A 300   THR    >                        ( 33.5 A from    O2  MRD A1517  )
         K  <A  60   LYS    > matches  <A 453   LYS    >                        ( 34.1 A from    O2  MRD A1517  )
         E  <A 124   GLU    > matches  <A 406   GLU    >                        ( 45.0 A from    O2  MRD A1517  )
 
KERBm  3*FOUND in 3ihp  size =    3  ^    UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5;                #    2                            
  RMSD =     1.67 A
  TRANSFORM   -0.6188  0.0006 -0.7855 -0.4473 -0.8223  0.3518  0.6457 -0.5690 -0.5091   -32.766   -55.135    -4.959              
         T  <A  34   THR    > matches  <A 577   THR    >                        ( 32.7 A from   ZN    ZN A 836  )
         K  <A  60   LYS    > matches  <A 585   LYS    >                        ( 32.4 A from   ZN    ZN A 836  )
         E  <A 124   GLU    > matches  <A 534   GLU    >                        ( 51.9 A from   ZN    ZN A 836  )
 
KERBm  3*FOUND in 5a62  size =    3  ^    PUTATIVE ALPHA/BETA HYDROLASE FOLD PROTEIN;             #    2                            
  RMSD =     1.67 A
  TRANSFORM    0.7745  0.6020 -0.1940 -0.4572  0.7449  0.4859 -0.4370  0.2876 -0.8522    17.468    -1.003    46.478              
         T  <A  34   THR    > matches  <A 231   THR    >                        ( 14.2 A from    CH3 ACT A 484  )
         K  <A  60   LYS    > matches  <A 127   LYS    >                        ( 15.5 A from    CH3 ACT A 484  )
         E  <A 124   GLU    > matches  <A 257   GLU    >                        ( 22.1 A from    OXT ACT A 484  )
 
KERBm  3*FOUND in 5na1  size =    3  ^    NADH DEHYDROGENASE-LIKE PROTEIN SAOUHSC_00878;          #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.6902 -0.7177 -0.0920  0.6868  0.6898 -0.2290 -0.2278 -0.0948 -0.9691    11.807   -41.421    -1.047              
         T  <A  34   THR    > matches  <A 352   THR    >                        (  5.0 A from    N3  FAD A1001  )
         K  <A  60   LYS    > matches  <A 379   LYS    >                        ( -2.9 A from    O4  FAD A1001s )
         E  <A 124   GLU    > matches  <A 311   GLU    >                        ( 19.6 A from    O2  FAD A1001  )
 
KERBm  3*FOUND in 4n01  size =    3  ^    PERIPLASMIC BINDING PROTEIN;                            #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.9390  0.3199  0.1265  0.2593  0.4167  0.8713 -0.2260 -0.8509  0.4742    21.675   -40.241    37.327              
         T  <A  34   THR    > matches  <A 227   THR    >                        (  8.0 A from    O2  FMT A 406  )
         K  <A  60   LYS    > matches  <A 231   LYS    >                        (  6.9 A from    O2  FMT A 406  )
         E  <A 124   GLU    > matches  <A  90   GLU    >                        ( -3.7 A from    O2  GOL A 403s )
 
KERBm  3*FOUND in 4xpm  size =    3  ^    PROTEIN MEH1;                                           #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.3032 -0.8901  0.3403 -0.4554  0.1784  0.8722  0.8371  0.4194  0.3513    36.351    17.470    46.736              
         T  <A  34   THR    > matches  <B  72   THR    > 
         K  <A  60   LYS    > matches  <A 151   LYS    > 
         E  <A 124   GLU    > matches  <B  33   GLU    > 
 
KERBm  3*FOUND in 5vbb  size =    3  ^    RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROT     #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.0992  0.2600  0.9605 -0.1656 -0.9561  0.2417 -0.9812  0.1351 -0.1379   -16.397    11.471    28.976              
         T  <A  34   THR    > matches  <A  70   THR    >                        (  5.8 A from   CL    CL A 304  )
         K  <A  60   LYS    > matches  <A  23   LYS    >                        (  7.1 A from    O4  SO4 A 301  )
         E  <A 124   GLU    > matches  <A 195   GLU    >                        ( 16.2 A from    O1  SO4 A 301  )
 
KERBm  3*FOUND in 5v6r  size =    3  ^    PLEXIN-D1;                                              #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.4648  0.8190  0.3365  0.4130  0.1356 -0.9006  0.7832 -0.5575  0.2752    74.165   -12.117    14.495              
         T  <A  34   THR    > matches  <A1460   THR    > 
         K  <A  60   LYS    > matches  <A1464   LYS    > 
         E  <A 124   GLU    > matches  <A1867   GLU    > 
 
KERBm  3*FOUND in 5b3h  size =    3  ^    PROTEIN SCARECROW;                                      #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.0392 -0.9986 -0.0347  0.9294 -0.0237 -0.3683 -0.3670  0.0467 -0.9291    -3.528     9.811    70.365              
         T  <A  34   THR    > matches  <B 464   THR    >                        ( 39.7 A from   ZN    ZN C 302  )
         K  <A  60   LYS    > matches  <B 467   LYS    >                        ( 43.9 A from   ZN    ZN C 301  )
         E  <A 124   GLU    > matches  <B 423   GLU    >                        ( 34.8 A from   ZN    ZN C 301  )
 
KERBm  3*FOUND in 3mdj  size =    3  ^    ENDOPLASMIC RETICULUM AMINOPEPTIDASE 1;                 #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.4862 -0.0366 -0.8731  0.5613 -0.7526  0.3441  0.6698  0.6574  0.3453    40.609    71.333     1.027              
         T  <A  34   THR    > matches  <A  79   THR    >                        ( 14.9 A from    O7  NAG A6000  )
         K  <A  60   LYS    > matches  <A  81   LYS    >                        ( 19.9 A from    O7  NAG A5001  )
         E  <A 124   GLU    > matches  <A 210   GLU    >                        ( -3.8 A from    N2  NAG A5001s )
 
KERBm  3*FOUND in 4pfb  size =    3  ^    C4-DICARBOXYLATE-BINDING PROTEIN;                       #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.7005  0.5826  0.4122  0.7123 -0.6059 -0.3542 -0.0434 -0.5417  0.8394   -36.230    43.518    20.493              
         T  <A  34   THR    > matches  <A 268   THR    >                        ( 12.2 A from   ZN    ZN A 408  )
         K  <A  60   LYS    > matches  <A 272   LYS    >                        ( 15.2 A from   ZN    ZN A 402  )
         E  <A 124   GLU    > matches  <A 257   GLU    >                        (-17.6 A from   ZN    ZN A 402s )
 
KERBm  3*FOUND in 6evu  size =    3  ^    PRGB;                                                   #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.0784 -0.2438 -0.9667 -0.8254 -0.5278  0.2001  0.5590 -0.8136  0.1599    25.924     9.001    36.962              
         T  <A  34   THR    > matches  <A 356   THR    >                        ( 24.4 A from    C2  TRS A 602  )
         K  <A  60   LYS    > matches  <A 371   LYS    >                        ( 28.6 A from    O2  TRS A 602  )
         E  <A 124   GLU    > matches  <A 348   GLU    >                        ( 21.3 A from    O4  PO4 A 601  )
 
KERBm  3*FOUND in 1bf5  size =    3  ^    DNA (5'-                                                #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.7724 -0.4134 -0.4822  0.6296 -0.3986 -0.6669 -0.0835  0.8187 -0.5681   145.377    32.699    27.260              
         T  <A  34   THR    > matches  <A 337   THR    >                        ( 45.4 A from    O1P PTR A 701  )
         K  <A  60   LYS    > matches  <A 410   LYS    >                        ( 45.9 A from    O1P PTR A 701  )
         E  <A 124   GLU    > matches  <A 563   GLU    >                        ( 35.8 A from    O1P PTR A 701  )
 
KERBm  3*FOUND in 3mn1  size =    3  ^    PROBABLE YRBI FAMILY PHOSPHATASE;                       #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.6713 -0.0355  0.7404 -0.6494 -0.4534 -0.6105 -0.3574  0.8906 -0.2813    59.890    68.036   -13.565              
         T  <A  34   THR    > matches  <A  29   THR    >                        ( 13.2 A from   CL    CL A 188  )
         K  <A  60   LYS    > matches  <A  43   LYS    >                        ( 15.8 A from   CL    CL A 188  )
         E  <A 124   GLU    > matches  <A   2   GLU    >                        ( 20.2 A from   CL    CL A 188  )
 
KERBm  3*FOUND in 2w3p  size =    3  ^    BENZOYL-COA-DIHYDRODIOL LYASE;                          #    1                            
  RMSD =     1.67 A
  TRANSFORM    0.2637  0.8369  0.4796 -0.4372  0.5470 -0.7139  0.8598  0.0214 -0.5102   -37.606     1.915    32.056              
         T  <A  34   THR    > matches  <A 282   THR    >                        ( 26.8 A from    O2  GOL A 603  )
         K  <A  60   LYS    > matches  <A 284   LYS    >                        ( 30.0 A from    C3  GOL A 604  )
         E  <A 124   GLU    > matches  <A 501   GLU    >                        ( 20.9 A from    S2  BME A 601  )
 
KERBm  3*FOUND in 4j34  size =    3  ^    KYNURENINE 3-MONOOXYGENASE;                             #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.4868  0.7893  0.3742 -0.6555 -0.0469 -0.7537  0.5773  0.6123 -0.5402   -50.594    55.521   -19.732              
         T  <A  34   THR    > matches  <A 203   THR    >                        ( 23.7 A from    O4  FAD A 401  )
         K  <A  60   LYS    > matches  <A 207   LYS    >                        ( 27.4 A from    O4  FAD A 401  )
         E  <A 124   GLU    > matches  <A 197   GLU    >                        (  6.1 A from    C7M FAD A 401  )
 
KERBm  3*FOUND in 3bes  size =    3  ^    INTERFERON GAMMA;                                       #    1                            
  RMSD =     1.67 A
  TRANSFORM   -0.2527  0.9675 -0.0047 -0.3731 -0.0930  0.9231 -0.8927 -0.2350 -0.3845    -3.377   -26.341    58.095              
         T  <A  34   THR    > matches  <R 125   THR    >                        ( 26.1 A from    C8  NAG R 270  )
         K  <A  60   LYS    > matches  <R 130   LYS    >                        ( 25.7 A from    C8  NAG R 270  )
         E  <A 124   GLU    > matches  <R  33   GLU    >                        ( 20.9 A from    C8  NAG R 267  )
 
KERBm  3*FOUND in 3d2l  size =    3  ^    SAM-DEPENDENT METHYLTRANSFERASE;                        #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.1439 -0.7848  0.6029  0.1032  0.6178  0.7795  0.9842  0.0500 -0.1699     3.339   -70.254   -53.824              
         T  <A  34   THR    > matches  <A  45   THR    >                        ( 32.9 A from   MG    MG A 243  )
         K  <A  60   LYS    > matches  <A  72   LYS    >                        ( 34.5 A from   MG    MG A 243  )
         E  <A 124   GLU    > matches  <A  28   GLU    >                        ( 21.4 A from   MG    MG A 243  )
 
KERBm  3*FOUND in 3eif  size =    3  ^    C5A PEPTIDASE;                                          #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.6173  0.3704  0.6941  0.3059 -0.6998  0.6455 -0.7248 -0.6108 -0.3187   -12.546    22.287    -0.150              
         T  <A  34   THR    > matches  <A 480   THR    >                        (  6.7 A from    O3  SO4 A   2  )
         K  <A  60   LYS    > matches  <A 486   LYS    >                        (  6.7 A from    O3  SO4 A   2  )
         E  <A 124   GLU    > matches  <A 864   GLU    >                        ( -5.1 A from    O4  SO4 A   4s )
 
KERBm  3*FOUND in 4w8y  size =    3  ^    CRISPR SYSTEM CMR SUBUNIT CMR2;                         #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.9681 -0.0237  0.2495  0.1861  0.5990  0.7789  0.1679 -0.8004  0.5754    35.672    40.967     5.622              
         T  <A  34   THR    > matches  <A 495   THR    >                        (  0.8 A from    CB  THR A 495  )
         K  <A  60   LYS    > matches  <A 282   LYS    >                        (  0.0 A from    NZ  LYS A 282  )
         E  <A 124   GLU    > matches  <A 339   GLU    >                        (  0.6 A from    CD  GLU A 339  )
 
KERBm  3*FOUND in 5o7n  size =    3  ^    BETA-LACTAMASE VIM-2;                                   #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.3955 -0.3288  0.8576  0.9151 -0.0612  0.3985  0.0785 -0.9424 -0.3251    14.414   -99.856    27.197              
         T  <A  34   THR    > matches  <A 253   THR    >                        (  8.8 A from    O2  FMT A 306  )
         K  <A  60   LYS    > matches  <A 257   LYS    >                        ( 11.5 A from    O2  FMT A 306  )
         E  <A 124   GLU    > matches  <A 232   GLU    >                        ( 20.3 A from    O1  EDO A 310  )
 
KERBm  3*FOUND in 3bje  size =    3  ^    NUCLEOSIDE PHOSPHORYLASE, PUTATIVE;                     #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.6655  0.0393  0.7454  0.4251 -0.8408 -0.3352 -0.6135 -0.5399  0.5762    23.480    -0.585    15.788              
         T  <A  34   THR    > matches  <A 132   THR    >                        ( 25.1 A from    O2P R1P A 401  )
         K  <A  60   LYS    > matches  <A 134   LYS    >                        ( 22.4 A from    O2P R1P A 401  )
         E  <A 124   GLU    > matches  <A 108   GLU    >                        ( 35.5 A from    O2P R1P A 401  )
 
KERBm  3*FOUND in 1afw  size =    3  ^    3-KETOACETYL-COA THIOLASE;                              #    2                            
  RMSD =     1.68 A
  TRANSFORM    0.5474 -0.8350  0.0551  0.7979  0.5009 -0.3355 -0.2525 -0.2276 -0.9404   -18.285   -21.069   114.033              
         T  <A  34   THR    > matches  <A 307   THR    >                        ( 15.2 A from    C5  MRD A 501  )
         K  <A  60   LYS    > matches  <A 325   LYS    >                        ( 19.9 A from    C5  MRD A 501  )
         E  <A 124   GLU    > matches  <A 153   GLU    >                        ( 10.7 A from    C5  MRD A 501  )
 
KERBm  3*FOUND in 5jxg  size =    3  ^    FURIN;                                                  #    2                            
  RMSD =     1.68 A
  TRANSFORM   -0.1513  0.1052  0.9829 -0.2792  0.9493 -0.1445  0.9482  0.2963  0.1143    24.043    57.848    -8.993              
         T  <A  34   THR    > matches  <A 554   THR    >                        ( 17.9 A from   CA    CA A 603  )
         K  <A  60   LYS    > matches  <A 463   LYS    >                        ( 24.5 A from   NA    NA A 609  )
         E  <A 124   GLU    > matches  <A 331   GLU    >                        ( -2.2 A from   CA    CA A 603s )
 
KERBm  3*FOUND in 5gxu  size =    3  ^    NADPH--CYTOCHROME P450 REDUCTASE 2;                     #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.3302  0.4977 -0.8021  0.1256  0.8190  0.5599 -0.9355  0.2856 -0.2079    31.848   -50.603    42.060              
         T  <A  34   THR    > matches  <A 115   THR    >                        ( -3.7 A from    O2P FMN A 801s )
         K  <A  60   LYS    > matches  <A 419   LYS    >                        (  5.6 A from    O2P FMN A 801  )
         E  <A 124   GLU    > matches  <A 252   GLU    >                        ( 21.2 A from    O4' FMN A 801  )
 
KERBm  3*FOUND in 5umh  size =    3  ^    CATECHOL 1,2-DIOXYGENASE;                               #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.6771  0.3381  0.6536 -0.1184  0.9267 -0.3568  0.7263 -0.1642 -0.6675    39.463    24.005    38.530              
         T  <A  34   THR    > matches  <A 104   THR    >                        (  7.8 A from    C1  EDO A 411  )
         K  <A  60   LYS    > matches  <A  82   LYS    >                        (  6.0 A from    O1  EDO A 411  )
         E  <A 124   GLU    > matches  <A 285   GLU    >                        ( 23.3 A from   ZN    ZN A 401  )
 
KERBm  3*FOUND in 4ca7  size =    3  ^    ANGIOTENSIN-CONVERTING ENZYME;                          #    2                            
  RMSD =     1.68 A
  TRANSFORM    0.9780  0.1642 -0.1287  0.2058 -0.6576  0.7247 -0.0344  0.7353  0.6769    -3.315   -43.960    25.391              
         T  <A  34   THR    > matches  <A 434   THR    >                        ( 10.1 A from    CAJ 3EF A1715  )
         K  <A  60   LYS    > matches  <A 438   LYS    >                        (  3.7 A from    OH  3EF A1715  )
         E  <A 124   GLU    > matches  <A 534   GLU    >                        ( 27.0 A from    C8  NAG A1621  )
 
KERBm  3*FOUND in 1htn  size =    3  ^    TETRANECTIN;                                            #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.1147 -0.2600  0.9588 -0.2378 -0.9299 -0.2806 -0.9645  0.2602 -0.0449    49.358    22.383    52.072              
         T  <A  34   THR    > matches  <A  48   THR    >                        ( 35.9 A from   CA    CA A 183  )
         K  <A  60   LYS    > matches  <A  52   LYS    >                        ( 33.0 A from   CA    CA A 183  )
         E  <A 124   GLU    > matches  <A  36   GLU    >                        ( 51.4 A from   CA    CA A 182  )
 
KERBm  3*FOUND in 6a5k  size =    3  ^    HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPE     #    3                            
  RMSD =     1.68 A
  TRANSFORM    0.2038  0.6050 -0.7697  0.8511 -0.4980 -0.1661  0.4838  0.6212  0.6165    35.964   -12.738   -68.728              
         T  <A  34   THR    > matches  <A 536   THR    >                        ( 15.5 A from    CE  SAM A 805  )
         K  <A  60   LYS    > matches  <A 514   LYS    >                        ( 17.2 A from    O   SAM A 805  )
         E  <A 124   GLU    > matches  <A 654   GLU    >                        ( 19.9 A from    CE  SAM A 805  )
 
KERBm  3*FOUND in 3odn  size =    3  ^    DALLY-LIKE PROTEIN;                                     #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.8412 -0.3682 -0.3960 -0.2728  0.3432 -0.8988 -0.4668 -0.8641 -0.1883    11.304    13.633    87.718              
         T  <A  34   THR    > matches  <A 162   THR    > 
         K  <A  60   LYS    > matches  <A 166   LYS    > 
         E  <A 124   GLU    > matches  <A 282   GLU    > 
 
KERBm  3*FOUND in 5fyz  size =    3  ^    LYSINE-SPECIFIC DEMETHYLASE 5B;                         #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.9042  0.0555  0.4234 -0.4120 -0.3744 -0.8308 -0.1124  0.9256 -0.3614    94.042    64.869   -33.355              
         T  <A  34   THR    > matches  <A 571   THR    >                        ( 12.1 A from    C01 NYK A1756  )
         K  <A  60   LYS    > matches  <A  63   LYS    >                        ( 14.2 A from    O13 NYK A1756  )
         E  <A 124   GLU    > matches  <A  92   GLU    >                        (  9.2 A from   NA    NA A1773  )
 
KERBm  3*FOUND in 2yfo  size =    3  ^    ALPHA-GALACTOSIDASE-SUCROSE KINASE AGASK;               #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.3801  0.2055 -0.9018  0.3921 -0.9189 -0.0441  0.8377  0.3368  0.4298    76.430     6.263   -34.506              
         T  <A  34   THR    > matches  <A 616   THR    >                        (  8.1 A from   NA    NA A1747  )
         K  <A  60   LYS    > matches  <A 619   LYS    >                        ( 13.5 A from   NA    NA A1747  )
         E  <A 124   GLU    > matches  <A 708   GLU    >                        ( 16.8 A from   NA    NA A1747  )
 
KERBm  3*FOUND in 4v33  size =    3  ^    POLYSACCHARIDE DEACETYLASE-LIKE PROTEIN;                #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.4939 -0.3839  0.7802 -0.2169 -0.9233 -0.3170 -0.8420  0.0126  0.5393   -22.789    46.020   -13.013              
         T  <A  34   THR    > matches  <A 134   THR    >                        ( 32.3 A from    O1  EDO A1365  )
         K  <A  60   LYS    > matches  <A  45+  LYS    >                        ( 36.9 A from    O1  EDO A1365  )
         E  <A 124   GLU    > matches  <A 109   GLU    >                        ( 22.8 A from    OXT ACT A1363  )
 
KERBm  3*FOUND in 3dwc  size =    3  ^    METALLOCARBOXYPEPTIDASE;                                #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.9385  0.1250 -0.3218 -0.3320 -0.5825  0.7419  0.0947 -0.8032 -0.5882    96.734   -17.121   120.386              
         T  <A  34   THR    > matches  <A 481   THR    >                        (  6.3 A from    C3  GOL A 708  )
         K  <A  60   LYS    > matches  <A 463   LYS    >                        ( -2.8 A from    O1  GOL A 708s )
         E  <A 124   GLU    > matches  <A 171   GLU    >                        ( 19.5 A from    O4  SO4 A 610  )
 
KERBm  3*FOUND in 2ok5  size =    3  ^    COMPLEMENT FACTOR B;                                    #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.2228 -0.2961 -0.9288  0.7432 -0.6682  0.0347  0.6309  0.6826 -0.3689    39.465    68.788    20.794              
         T  <A  34   THR    > matches  <A 291   THR    >                        ( 19.0 A from    C1  NAG A1260  )
         K  <A  60   LYS    > matches  <A 332   LYS    >                        ( 23.6 A from    C1  NAG A1260  )
         E  <A 124   GLU    > matches  <A  29   GLU    >                        ( 11.5 A from    O7  NAG A1260  )
 
KERBm  3*FOUND in 4zwv  size =    3  ^    PUTATIVE AMINOTRANSFERASE;                              #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.7180 -0.5779  0.3879  0.3280 -0.2105 -0.9209 -0.6139 -0.7885 -0.0384    50.419    32.277    87.966              
         T  <A  34   THR    > matches  <A 364   THR    >                        ( 11.4 A from    O1  GOL A 402  )
         K  <A  60   LYS    > matches  <A 306   LYS    >                        (  7.9 A from    O1  GOL A 402  )
         E  <A 124   GLU    > matches  <A 262   GLU    >                        ( 18.2 A from    O  ALLP A 187  )
 
KERBm  3*FOUND in 3wir  size =    3  ^    KOJIBIOSE PHOSPHORYLASE;                                #    2                            
  RMSD =     1.68 A
  TRANSFORM    0.2247 -0.1593  0.9613  0.9728  0.0937 -0.2118  0.0564 -0.9828 -0.1760    35.252   -40.488    -3.369              
         T  <A  34   THR    > matches  <A 670   THR    >                        (  9.9 A from    O4  PO4 A 805  )
         K  <A  60   LYS    > matches  <A  20   LYS    >                        ( 15.7 A from    O4  PO4 A 805  )
         E  <A 124   GLU    > matches  <A 483   GLU    >                        (  2.6 A from    O3  BGC A 802s )
 
KERBm  3*FOUND in 4oic  size =    3  ^    BET V I ALLERGEN-LIKE;                                  #    2                            
  RMSD =     1.68 A
  TRANSFORM    0.5139  0.8579  0.0023  0.8389 -0.5031  0.2079 -0.1795  0.1049  0.9781    10.699   -30.317   -48.092              
         T  <A  34   THR    > matches  <B 370   THR    >                        ( 11.5 A from   MN    MN B 504  )
         K  <A  60   LYS    > matches  <B 246   LYS    >                        ( 10.7 A from   MN    MN B 504  )
         E  <A 124   GLU    > matches  <B 395   GLU    >                        ( 20.5 A from   NA    NA B 505  )
 
KERBm  3*FOUND in 3fo3  size =    3  ^    EIGHT-HEME NITRITE REDUCTASE;                           #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.9398  0.3317  0.0826  0.0543  0.0938 -0.9941  0.3375 -0.9387 -0.0702   -44.667   152.248    51.374              
         T  <A  34   THR    > matches  <A 502   THR    >                        (  4.1 A from    C2  PG6 A 536  )
         K  <A  60   LYS    > matches  <A 506   LYS    >                        ( -3.4 A from    C1  PG6 A 536s )
         E  <A 124   GLU    > matches  <A 363   GLU    >                        (  4.3 A from   HBD1 HEC A1004  )
 
KERBm  3*FOUND in 4c8m  size =    3  ^    LARGE FRAGMENT OF TAQ DNA POLYMERASE I;                 #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.3920  0.1195  0.9122 -0.8156 -0.4136  0.4047 -0.4257  0.9026  0.0647   -11.568   -35.480    43.006              
         T  <A  34   THR    > matches  <A 544   THR    >                        ( 23.0 A from    H12 GOL A1837  )
         K  <A  60   LYS    > matches  <A 540   LYS    >                        ( 22.9 A from    H31 GOL A1838  )
         E  <A 124   GLU    > matches  <A 445   GLU    >                        ( 12.5 A from    H2  GOL A1837  )
 
KERBm  3*FOUND in 3swh  size =    3  ^    PROTEIN UNC-13 HOMOLOG A;                               #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.3812  0.2373 -0.8935  0.1394 -0.9702 -0.1982  0.9139  0.0489  0.4029     2.492    21.710   -27.293              
         T  <A  34   THR    > matches  <A1373   THR    > 
         K  <A  60   LYS    > matches  <A1377   LYS    > 
         E  <A 124   GLU    > matches  <A1327   GLU    > 
 
KERBm  3*FOUND in 1sxj  size =    3  ^    ACTIVATOR 1 95 KDA SUBUNIT;                             #    2                            
  RMSD =     1.68 A
  TRANSFORM    0.3516  0.4973 -0.7931  0.2435 -0.8666 -0.4355  0.9039  0.0400  0.4258     8.662    21.787    14.853              
         T  <A  34   THR    > matches  <D  69   THR    >                        ( -4.2 A from    O1B AGS D 804s )
         K  <A  60   LYS    > matches  <D  71   LYS    >                        ( -3.2 A from    S1G AGS D 804s )
         E  <A 124   GLU    > matches  <D 306   GLU    >                        ( 22.0 A from    N7  AGS D 804  )
 
KERBm  3*FOUND in 3ilv  size =    3  ^    GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE;                  #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.4164  0.1473 -0.8972 -0.0285  0.9884  0.1491 -0.9088  0.0365 -0.4157    63.936   -26.312    93.128              
         T  <A  34   THR    > matches  <A  14   THR    > 
         K  <A  60   LYS    > matches  <A 298   LYS    > 
         E  <A 124   GLU    > matches  <A  67   GLU    > 
 
KERBm  3*FOUND in 1wdc  size =    3  ^    SCALLOP MYOSIN;                                         #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.7275 -0.5953 -0.3412  0.6667  0.4958  0.5564  0.1620  0.6323 -0.7576    54.278   -51.472    71.316              
         T  <A  34   THR    > matches  <C  55   THR    >                        ( 13.7 A from   CA    CA C 501  )
         K  <A  60   LYS    > matches  <C  61   LYS    >                        ( 14.2 A from   CA    CA C 501  )
         E  <A 124   GLU    > matches  <C 120   GLU    >                        ( 23.1 A from   CA    CA C 501  )
 
KERBm  3*FOUND in 5y5a  size =    3  ^    KLLA0F20702P;                                           #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.3521  0.0734  0.9331  0.2394 -0.9567  0.1656 -0.9048 -0.2817 -0.3192   -10.133    -8.725    93.416              
         T  <A  34   THR    > matches  <A 156   THR    > 
         K  <A  60   LYS    > matches  <A 159   LYS    > 
         E  <A 124   GLU    > matches  <A 178   GLU    > 
 
KERBm  3*FOUND in 5y9q  size =    3  ^    CARBON CATABOLITE RESPONSIVE REGULATOR;                 #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.8300 -0.4489  0.3309 -0.3143  0.1136  0.9425  0.4607  0.8863  0.0469    37.921    -8.411    28.042              
         T  <A  34   THR    > matches  <A  39   THR    > 
         K  <A  60   LYS    > matches  <A  43   LYS    > 
         E  <A 124   GLU    > matches  <A 128   GLU    > 
 
KERBm  3*FOUND in 4tq1  size =    3  ^    AUTOPHAGY PROTEIN 5;                                    #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.3132  0.2562  0.9145  0.3586  0.8597 -0.3637  0.8794 -0.4419 -0.1774    16.511    16.377    22.469              
         T  <A  34   THR    > matches  <B 587   THR    > 
         K  <A  60   LYS    > matches  <B 591   LYS    > 
         E  <A 124   GLU    > matches  <A 248   GLU    > 
 
KERBm  3*FOUND in 1kzq  size =    3  ^    MAJOR SURFACE ANTIGEN P30;                              #    2                            
  RMSD =     1.68 A
  TRANSFORM    0.4201 -0.6284 -0.6547  0.6801 -0.2596  0.6856  0.6008  0.7333 -0.3183    29.903   -41.169     6.502              
         T  <A  34   THR    > matches  <A  31   THR    > 
         K  <A  60   LYS    > matches  <A  33   LYS    > 
         E  <A 124   GLU    > matches  <A 100   GLU    > 
 
KERBm  3*FOUND in 3aon  size =    3  ^    V-TYPE SODIUM ATPASE SUBUNIT D;                         #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.6449 -0.7626 -0.0514 -0.7204  0.5840  0.3742  0.2554 -0.2784  0.9259     3.202   -11.401   -11.960              
         T  <A  34   THR    > matches  <A 163   THR    >                        ( 35.2 A from    O3  NO3 B 116  )
         K  <A  60   LYS    > matches  <A  32   LYS    >                        ( 38.4 A from    O3  NO3 B 116  )
         E  <A 124   GLU    > matches  <B  63   GLU    >                        ( 20.4 A from    O3  NO3 B 116  )
 
KERBm  3*FOUND in 5l3s  size =    3  ^    SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN;             #    1                            
  RMSD =     1.68 A
  TRANSFORM    0.1701  0.6471  0.7432  0.9204 -0.3738  0.1148 -0.3521 -0.6645  0.6592   -25.355   -14.580    -6.304              
         T  <A  34   THR    > matches  <A 112   THR    >                        (  5.7 A from    N7  GNP A 301  )
         K  <A  60   LYS    > matches  <A 115   LYS    >                        ( -3.1 A from    O6  GNP A 301s )
         E  <A 124   GLU    > matches  <A 195   GLU    >                        ( -4.2 A from    N2  GNP B 401s )
 
KERBm  3*FOUND in 1jnr  size =    3  ^    ADENYLYLSULFATE REDUCTASE;                              #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.4469 -0.5352  0.7169 -0.4582 -0.5513 -0.6972 -0.7683  0.6401 -0.0011   -57.231   112.870    42.519              
         T  <A  34   THR    > matches  <A  53   THR    >                        ( 12.0 A from    C2A FAD A1000  )
         K  <A  60   LYS    > matches  <A  51   LYS    >                        ( 17.0 A from    C2A FAD A1000  )
         E  <A 124   GLU    > matches  <A 573   GLU    >                        (  7.2 A from    N7A FAD A1000  )
 
KERBm  3*FOUND in 3f8p  size =    3  ^    THIOREDOXIN REDUCTASE (TRXB-3);                         #    1                            
  RMSD =     1.68 A
  TRANSFORM   -0.9466 -0.3121  0.0815 -0.2644  0.8955  0.3580  0.1847 -0.3174  0.9301    80.099   -58.733    27.134              
         T  <A  34   THR    > matches  <A 253   THR    >                        ( 12.9 A from    N7A NAD A4001  )
         K  <A  60   LYS    > matches  <A 257   LYS    >                        ( 15.8 A from    N6A NAD A4001  )
         E  <A 124   GLU    > matches  <A 246   GLU    >                        (  7.1 A from    O1  SO4 A4159  )
 
KERBm  3*FOUND in 4mjf  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    2                            
  RMSD =     1.69 A
  TRANSFORM   -0.3667 -0.0979  0.9252 -0.7479 -0.5605 -0.3558 -0.5534  0.8224 -0.1323    24.311    70.709   -17.188              
         T  <A  34   THR    > matches  <A  90   THR    >                        (  8.2 A from    O2  CXS A 301  )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        ( 12.3 A from    C2  CXS A 301  )
         E  <A 124   GLU    > matches  <A 234   GLU    >                        ( -4.5 A from    O4  SO4 A 305s )
 
KERBm  3*FOUND in 3pw3  size =    3  ^    AMINOPEPTIDASE C;                                       #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.4280 -0.9021 -0.0546 -0.6576  0.2694  0.7035  0.6199 -0.3371  0.7086   136.422   -61.454    19.002              
         T  <A  34   THR    > matches  <A 209   THR    >                        ( 13.3 A from    K     K A 408  )
         K  <A  60   LYS    > matches  <A  74   LYS    >                        ( 11.5 A from    O2  EDO A 436  )
         E  <A 124   GLU    > matches  <A 191   GLU    >                        ( 22.1 A from    K     K A 408  )
 
KERBm  3*FOUND in 5w78  size =    3  ^    ACYLOXYACYL HYDROLASE;                                  #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.2924  0.9526  0.0842 -0.9562  0.2897  0.0426 -0.0162  0.0930 -0.9955   -85.010    29.007    51.128              
         T  <A  34   THR    > matches  <B 471   THR    >                        (  8.8 A from    H62 NAG B 605  )
         K  <A  60   LYS    > matches  <B 467   LYS    >                        ( 11.9 A from    H1  NAG B 605  )
         E  <A 124   GLU    > matches  <B 390   GLU    >                        ( 17.7 A from    H3  NAG B 606  )
 
KERBm  3*FOUND in 5zhz  size =    3  ^    PROBABLE ENDONUCLEASE 4;                                #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.0946  0.2828  0.9545  0.9708 -0.1860  0.1513 -0.2203 -0.9410  0.2570    18.550   -26.980    19.834              
         T  <A  34   THR    > matches  <A 250   THR    >                        ( 18.1 A from   ZN    ZN A 305  )
         K  <A  60   LYS    > matches  <A 224   LYS    >                        ( 21.8 A from   ZN    ZN A 305  )
         E  <A 124   GLU    > matches  <A  17   GLU    >                        ( 23.9 A from   ZN    ZN A 305  )
 
KERBm  3*FOUND in 3woa  size =    3  ^    REPRESSOR PROTEIN CI, MALTOSE-BINDING PERIPLASMIC P     #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.0035 -0.8431 -0.5378  0.9169 -0.2120  0.3383  0.3992  0.4943 -0.7722    27.116    43.716    13.283              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 21.3 A from    O1' MAL A 501  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        ( 26.6 A from    O1' MAL A 501  )
         E  <A 124   GLU    > matches  <A  93   GLU    >                        (  5.6 A from    O4  MAL A 501  )
 
KERBm  3*FOUND in 2xes  size =    3  ^    PROTEIN PAT1 HOMOLOG 1;                                 #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.8728 -0.2164  0.4374 -0.3048 -0.4583 -0.8349 -0.3811  0.8621 -0.3340    -4.529    21.042    22.287              
         T  <A  34   THR    > matches  <A 522   THR    >                        (  3.8 A from    K     K A1771  )
         K  <A  60   LYS    > matches  <A 518   LYS    >                        (  6.6 A from    K     K A1771  )
         E  <A 124   GLU    > matches  <A 537   GLU    >                        (  8.1 A from    N   SCN A1768  )
 
KERBm  3*FOUND in 1to9  size =    3  ^    THI-4 PROTEIN;                                          #    2                            
  RMSD =     1.69 A
  TRANSFORM    0.7250  0.6867 -0.0527  0.3537 -0.3056  0.8840 -0.5910  0.6595  0.4645    39.526   -23.131    35.064              
         T  <A  34   THR    > matches  <A  49   THR    >                        ( 12.0 A from    O1 AHMH A 301  )
         K  <A  60   LYS    > matches  <A  53   LYS    >                        ( 16.6 A from    O1 BHMH A 301  )
         E  <A 124   GLU    > matches  <A  99   GLU    >                        ( 20.0 A from    N4A HMH A 301  )
 
KERBm  3*FOUND in 1r4x  size =    3  ^    COATOMER GAMMA SUBUNIT;                                 #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.8390 -0.5416 -0.0512 -0.0159  0.0697 -0.9974 -0.5438 -0.8377 -0.0499    14.329    17.001    71.121              
         T  <A  34   THR    > matches  <A 731   THR    >                        ( 15.4 A from   MG    MG A 875  )
         K  <A  60   LYS    > matches  <A 733   LYS    >                        ( 15.6 A from   MG    MG A 875  )
         E  <A 124   GLU    > matches  <A 682   GLU    >                        ( 14.2 A from    O   CAS A 691  )
 
KERBm  3*FOUND in 3m8k  size =    3  ^    FTSZ/TUBULIN-RELATED PROTEIN;                           #    2                            
  RMSD =     1.69 A
  TRANSFORM    0.2207 -0.9366  0.2722  0.4536 -0.1485 -0.8787 -0.8634 -0.3174 -0.3921    48.478    28.957    87.071              
         T  <A  34   THR    > matches  <A  55   THR    > 
         K  <A  60   LYS    > matches  <A 118   LYS    > 
         E  <A 124   GLU    > matches  <A 250   GLU    > 
 
KERBm  3*FOUND in 1py5  size =    3  ^    TGF-BETA RECEPTOR TYPE I;                               #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.4045 -0.1409  0.9036  0.4996  0.8616 -0.0892  0.7660 -0.4875 -0.4189    18.709   -11.083    12.940              
         T  <A  34   THR    > matches  <A 346   THR    >                        ( 13.9 A from    N23 PY1 A 700  )
         K  <A  60   LYS    > matches  <A 304   LYS    >                        ( 18.0 A from    N23 PY1 A 700  )
         E  <A 124   GLU    > matches  <A 227   GLU    >                        ( 13.3 A from    C24 PY1 A 700  )
 
KERBm  3*FOUND in 2a9v  size =    3  ^    GMP SYNTHASE;                                           #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.6770  0.7116  0.1878  0.1594  0.1073 -0.9814  0.7185 -0.6943  0.0408    -5.385     8.335   -19.835              
         T  <A  34   THR    > matches  <A 141   THR    >                        (  4.3 A from    S   SCN A 201  )
         K  <A  60   LYS    > matches  <A 157   LYS    >                        ( -3.0 A from    N   SCN A 201s )
         E  <A 124   GLU    > matches  <A 101   GLU    >                        ( 18.4 A from    S   SCN A 201  )
 
KERBm  3*FOUND in 5iwi  size =    3  ^    DNA GYRASE SUBUNIT B,DNA GYRASE SUBUNIT B;              #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.2041  0.5912 -0.7803  0.1011  0.8055  0.5839 -0.9737 -0.0403  0.2241    36.881   -48.137    28.155              
         T  <A  34   THR    > matches  <A  59   THR    >                        (  6.8 A from    C1  GOL A 505  )
         K  <A  60   LYS    > matches  <A  62   LYS    >                        (  7.2 A from    O1  GOL A 505  )
         E  <A 124   GLU    > matches  <A 156   GLU    >                        (  3.8 A from    C1  GOL A 502  )
 
KERBm  3*FOUND in 1lkx  size =    3  ^    MYOSIN IE HEAVY CHAIN;                                  #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.6484  0.0151  0.7612  0.7491 -0.1658  0.6414 -0.1359 -0.9860 -0.0962   108.647   -88.994   102.937              
         T  <A  34   THR    > matches  <A  29   THR    >                        ( 17.5 A from    N7  ADP A 791  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        ( 16.9 A from    C4  ADP A 791  )
         E  <A 124   GLU    > matches  <A 615   GLU    >                        ( 21.8 A from    O3B ADP A 791  )
 
KERBm  3*FOUND in 5kdw  size =    3  ^    METALLOPEPTIDASE;                                       #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.1580 -0.4310  0.8884 -0.9069  0.2926  0.3032  0.3907  0.8536  0.3446     3.308    27.063   -17.772              
         T  <A  34   THR    > matches  <A 684   THR    >                        (  7.4 A from    O1  EDO A1008  )
         K  <A  60   LYS    > matches  <A 594   LYS    >                        (  6.6 A from    O1  EDO A1008  )
         E  <A 124   GLU    > matches  <A 716   GLU    >                        ( -2.2 A from   ZN    ZN A1022s )
 
KERBm  3*FOUND in 3pe7  size =    3  ^    OLIGOGALACTURONATE LYASE;                               #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.7515 -0.3507 -0.5588  0.3195 -0.5476  0.7733  0.5772  0.7597  0.2995    45.601    -3.128     3.692              
         T  <A  34   THR    > matches  <A  32   THR    >                        ( 15.3 A from   MN    MN A 389  )
         K  <A  60   LYS    > matches  <A 374   LYS    >                        ( 16.0 A from   CA    CA A 390  )
         E  <A 124   GLU    > matches  <A 114   GLU    >                        ( 11.7 A from    CH3 ACT A 393  )
 
KERBm  3*FOUND in 4e3y  size =    3  ^    NUCLEASE;                                               #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.1643 -0.2681  0.9493 -0.9730  0.1138  0.2006  0.1618  0.9567  0.2421   -31.405     1.623   -29.471              
         T  <A  34   THR    > matches  <A1165   THR    >                        (  8.2 A from    O1  PEG A2603  )
         K  <A  60   LYS    > matches  <A1156   LYS    >                        (  8.8 A from    O1  PEG A2603  )
         E  <A 124   GLU    > matches  <A1209   GLU    >                        (  6.1 A from    O2  EDO A2602  )
 
KERBm  3*FOUND in 3zx4  size =    3  ^    MANNOSYL-3-PHOSPHOGLYCERATE PHOSPHATASE;                #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.2126  0.9463 -0.2437  0.5737  0.0810  0.8150 -0.7910  0.3131  0.5257   -42.782   -30.944    32.637              
         T  <A  34   THR    > matches  <A  39   THR    >                        ( -3.6 A from    O1  PO4 A 261s )
         K  <A  60   LYS    > matches  <A 177   LYS    >                        ( -3.2 A from    O2  PO4 A 261s )
         E  <A 124   GLU    > matches  <A 127   GLU    >                        ( 13.9 A from    O4  2M8 A 262  )
 
KERBm  3*FOUND in 2xol  size =    3  ^    CHAPERONE PROTEIN TTRD;                                 #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.9093 -0.3719 -0.1866  0.4154  0.7856  0.4586  0.0240  0.4945 -0.8688     0.806   -12.975    30.228              
         T  <A  34   THR    > matches  <A   2   THR    >                        (  8.9 A from    C2  EDO A1167  )
         K  <A  60   LYS    > matches  <A  -1+  LYS    >                        ( 11.5 A from    C1  EDO A1167  )
         E  <A 124   GLU    > matches  <A  94   GLU    >                        ( 17.1 A from    O2  EDO A1167  )
 
KERBm  3*FOUND in 4ewt  size =    3  ^    PEPTIDASE, M20/M25/M40 FAMILY;                          #    2                            
  RMSD =     1.69 A
  TRANSFORM    0.6857  0.7212  0.0985  0.3575 -0.2158 -0.9086  0.6341 -0.6583  0.4058    43.343    -1.776   -53.278              
         T  <A  34   THR    > matches  <A 127   THR    >                        ( 31.7 A from   MN    MN A 402  )
         K  <A  60   LYS    > matches  <A  68   LYS    >                        ( 33.3 A from   MN    MN A 402  )
         E  <A 124   GLU    > matches  <A 316   GLU    >                        ( 30.0 A from   MN    MN A 402  )
 
KERBm  3*FOUND in 3loy  size =    3  ^    COPPER AMINE OXIDASE;                                   #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.8019 -0.0227  0.5970 -0.4041  0.7566 -0.5141  0.4400  0.6535  0.6159   -37.075   -46.894    20.049              
         T  <A  34   THR    > matches  <A 382   THR    >                        (  4.1 A from    O   TPQ A 386  )
         K  <A  60   LYS    > matches  <A 387+  LYS    >                        (  3.4 A from    C   TPQ A 386  )
         E  <A 124   GLU    > matches  <A 108   GLU    >                        ( 21.4 A from    O5  TPQ A 386  )
 
KERBm  3*FOUND in 3nl6  size =    3  ^    THIAMINE BIOSYNTHETIC BIFUNCTIONAL ENZYME;              #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.6206  0.7736 -0.1284 -0.3191  0.0996 -0.9425  0.7163 -0.6258 -0.3087   -31.244   -35.564     0.205              
         T  <A  34   THR    > matches  <A 416   THR    >                        ( -3.1 A from    O2A ACP A 799s )
         K  <A  60   LYS    > matches  <A 367   LYS    >                        (  3.7 A from    O1B ACP A 799  )
         E  <A 124   GLU    > matches  <A 505   GLU    >                        ( 12.4 A from    C2  ACP A 799  )
 
KERBm  3*FOUND in 5gta  size =    3  ^    AUTOINDUCER 2-BINDING PROTEIN LSRB;                     #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.4762  0.8447 -0.2444 -0.6371 -0.5230 -0.5662  0.6061  0.1140 -0.7872   -35.919     7.634    17.946              
         T  <A  34   THR    > matches  <A 203   THR    >                        ( 14.7 A from    O12 PAV A 401  )
         K  <A  60   LYS    > matches  <A 199   LYS    >                        ( 17.3 A from    O12 PAV A 401  )
         E  <A 124   GLU    > matches  <A 186   GLU    >                        ( 26.0 A from    O3  PAV A 401  )
 
KERBm  3*FOUND in 5txu  size =    3  ^    STAGE II SPORULATION PROTEIN D;                         #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.2313  0.8881 -0.3972 -0.5292 -0.2277 -0.8174  0.8163 -0.3993 -0.4173    14.665    28.810   -16.447              
         T  <A  34   THR    > matches  <A 184   THR    >                        (  9.1 A from    O1  FMT A 410  )
         K  <A  60   LYS    > matches  <A 351   LYS    >                        ( 11.7 A from   NA    NA A 402  )
         E  <A 124   GLU    > matches  <A 206   GLU    >                        ( -9.0 A from    O2  FMT A 406s )
 
KERBm  3*FOUND in 3d0g  size =    3  ^    ANGIOTENSIN-CONVERTING ENZYME 2;                        #    2                            
  RMSD =     1.69 A
  TRANSFORM    0.8700  0.4488  0.2044 -0.4931  0.7933  0.3570  0.0020  0.4114 -0.9115   -54.996   -26.909    85.614              
         T  <A  34   THR    > matches  <A 593   THR    >                        ( 31.2 A from   ZN    ZN A 901  )
         K  <A  60   LYS    > matches  <A 596   LYS    >                        ( 31.3 A from   CL    CL A 902  )
         E  <A 124   GLU    > matches  <A 536   GLU    >                        ( 32.4 A from   ZN    ZN A 901  )
 
KERBm  3*FOUND in 4u4p  size =    3  ^    STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2;        #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.7835  0.3540  0.5108 -0.2739  0.5411 -0.7951  0.5578  0.7629  0.3270    32.660    15.160     3.398              
         T  <A  34   THR    > matches  <A 559   THR    > 
         K  <A  60   LYS    > matches  <A 562   LYS    > 
         E  <A 124   GLU    > matches  <A 621   GLU    > 
 
KERBm  3*FOUND in 3tf0  size =    3  ^    METHYL-ACCEPTING CHEMOTAXIS PROTEIN;                    #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.1071 -0.3174 -0.9422 -0.6199 -0.7196  0.3129  0.7773 -0.6176  0.1197    64.835    36.601   -21.113              
         T  <A  34   THR    > matches  <A  77   THR    >                        (  9.9 A from   HMBB HEM A 500  )
         K  <A  60   LYS    > matches  <A  11   LYS    >                        ( 14.2 A from    H3  ACT A 189  )
         E  <A 124   GLU    > matches  <A 154   GLU    >                        ( 12.6 A from    HMC HEM A 500  )
 
KERBm  3*FOUND in 5b66  size =    3  ^    PHOTOSYSTEM II PROTEIN D1;                              #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.8543  0.1111  0.5077  0.5057 -0.4028 -0.7629 -0.1198 -0.9085  0.4003   -56.417    33.769    -6.577              
         T  <A  34   THR    > matches  <O  94   THR    >                        (  9.0 A from    C2  DMS O 304  )
         K  <A  60   LYS    > matches  <O  86   LYS    >                        (  9.2 A from    C2  DMS O 303  )
         E  <A 124   GLU    > matches  <O 218   GLU    >                        (  5.1 A from    S   DMS O 306  )
 
KERBm  3*FOUND in 3s28  size =    3  ^    SUCROSE SYNTHASE 1;                                     #    3                            
  RMSD =     1.69 A
  TRANSFORM    0.2664  0.2070  0.9414 -0.5525  0.8331 -0.0268  0.7898  0.5130 -0.3363    32.384    24.838   189.146              
         T  <A  34   THR    > matches  <A 432   THR    >                        ( 16.9 A from    K     K A 931  )
         K  <A  60   LYS    > matches  <A 773   LYS    >                        ( 14.6 A from    K     K A 931  )
         E  <A 124   GLU    > matches  <A 316   GLU    >                        ( 20.0 A from    O3  SO4 A 911  )
 
KERBm  3*FOUND in 4pj3  size =    3  ^    INTRON-BINDING PROTEIN AQUARIUS;                        #    4                            
  RMSD =     1.69 A
  TRANSFORM   -0.0208  0.5084 -0.8609 -0.6795  0.6244  0.3852 -0.7334 -0.5930 -0.3325   138.808   -30.460   110.506              
         T  <A  34   THR    > matches  <A1259   THR    >                        ( 17.5 A from    O2G ANP A1501  )
         K  <A  60   LYS    > matches  <A1234   LYS    >                        ( 20.9 A from    O2G ANP A1501  )
         E  <A 124   GLU    > matches  <A 104   GLU    >                        ( 23.3 A from   MG    MG A1503  )
 
KERBm  3*FOUND in 5lun  size =    3  ^    2-OXOGLUTARATE-DEPENDENT ETHYLENE/SUCCINATE-FORMING     #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.0164 -0.7196  0.6942 -0.0202 -0.6939 -0.7198 -0.9997  0.0259  0.0032    44.560  -112.655   149.390              
         T  <A  34   THR    > matches  <A 132   THR    >                        ( 19.0 A from    O3  GOL A 404  )
         K  <A  60   LYS    > matches  <A 128   LYS    >                        ( 16.3 A from    O3  GOL A 404  )
         E  <A 124   GLU    > matches  <A  12   GLU    >                        ( 26.6 A from    O4 BOGA A 402  )
 
KERBm  3*FOUND in 1tmx  size =    3  ^    HYDROXYQUINOL 1,2-DIOXYGENASE;                          #    2                            
  RMSD =     1.69 A
  TRANSFORM    0.7152 -0.4799  0.5082  0.6345  0.1409 -0.7600 -0.2931 -0.8659 -0.4052   -14.338   -26.016    33.419              
         T  <A  34   THR    > matches  <A 106   THR    >                        (  8.2 A from    O1  BEZ A 881  )
         K  <A  60   LYS    > matches  <A 255   LYS    >                        ( -6.0 A from    O1  SO4 A 902s )
         E  <A 124   GLU    > matches  <A 114   GLU    >                        ( 14.8 A from    O2  BEZ A 881  )
 
KERBm  3*FOUND in 2p6x  size =    3  ^    TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 22;      #    2                            
  RMSD =     1.69 A
  TRANSFORM   -0.9702 -0.0444  0.2381  0.0120 -0.9906 -0.1360 -0.2419  0.1291 -0.9617    23.494    32.404   108.938              
         T  <A  34   THR    > matches  <A 173   THR    >                        ( 29.9 A from    O1  EDO A 601  )
         K  <A  60   LYS    > matches  <A 175   LYS    >                        ( 33.6 A from    O1  EDO A 601  )
         E  <A 124   GLU    > matches  <A 207   GLU    >                        ( 14.7 A from    O2  EDO A 604  )
 
KERBm  3*FOUND in 6bhc  size =    3  ^    PSEUDOPODIUM-ENRICHED ATYPICAL KINASE 1;                #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.9189 -0.1441 -0.3671  0.3315  0.2222 -0.9169 -0.2137  0.9643  0.1564    30.761    -7.215    15.516              
         T  <A  34   THR    > matches  <A1295   THR    > 
         K  <A  60   LYS    > matches  <A1299   LYS    > 
         E  <A 124   GLU    > matches  <A1285   GLU    > 
 
KERBm  3*FOUND in 2pn5  size =    3  ^    THIOESTER-CONTAINING PROTEIN I;                         #    2                            
  RMSD =     1.69 A
  TRANSFORM   -0.5079  0.3960  0.7650  0.5619  0.8254 -0.0542  0.6529 -0.4023  0.6418   -35.295  -105.834   -97.877              
         T  <A  34   THR    > matches  <A 913   THR    >                        ( 20.0 A from   NA    NA A1331  )
         K  <A  60   LYS    > matches  <A 916   LYS    >                        ( 25.2 A from   NA    NA A1331  )
         E  <A 124   GLU    > matches  <A1050   GLU    >                        ( 13.1 A from   NA    NA A1331  )
 
KERBm  3*FOUND in 1uay  size =    3  ^    TYPE II 3-HYDROXYACYL-COA DEHYDROGENASE;                #    2                            
  RMSD =     1.69 A
  TRANSFORM    0.8631  0.2827  0.4185 -0.4505  0.8054  0.3851  0.2282  0.5209 -0.8225   -13.835   -12.294    20.769              
         T  <A  34   THR    > matches  <A 133   THR    >                        (  7.7 A from    O5' ADN A1001  )
         K  <A  60   LYS    > matches  <A 152   LYS    >                        (  7.4 A from    O5' ADN A1001  )
         E  <A 124   GLU    > matches  <A 222   GLU    >                        ( 23.8 A from    O5' ADN A1001  )
 
KERBm  3*FOUND in 3qx3  size =    3  ^    DNA TOPOISOMERASE 2-BETA;                               #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.9977  0.0547 -0.0408  0.0671  0.8947 -0.4416 -0.0124  0.4433  0.8963    62.435   -54.901   -76.838              
         T  <A  34   THR    > matches  <A 666   THR    >                        ( 26.5 A from   MG    MG A1222  )
         K  <A  60   LYS    > matches  <A 673   LYS    >                        ( 30.2 A from   MG    MG A1222  )
         E  <A 124   GLU    > matches  <A 588   GLU    >                        ( 14.5 A from   MG    MG A1222  )
 
KERBm  3*FOUND in 5mhf  size =    3  ^    MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE;                   #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.6902  0.7150 -0.1108  0.7134  0.6470 -0.2692  0.1207  0.2649  0.9567    28.004   -65.881   -11.975              
         T  <A  34   THR    > matches  <A 154   THR    >                        ( 11.4 A from    N   MLY A 366  )
         K  <A  60   LYS    > matches  <A 173   LYS    >                        ( 16.0 A from    O   MLY A 111  )
         E  <A 124   GLU    > matches  <A 370   GLU    >                        (  3.0 A from    CB  MLY A 376  )
 
KERBm  3*FOUND in 4du6  size =    3  ^    GTP CYCLOHYDROLASE 1;                                   #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.7926 -0.4810  0.3747  0.2679  0.2773  0.9227  0.5477 -0.8317  0.0909   116.584   -16.788   -48.284              
         T  <A  34   THR    > matches  <A 167   THR    >                        ( 13.6 A from    C1  GOL A 302  )
         K  <A  60   LYS    > matches  <A 127   LYS    >                        ( 17.4 A from    N2  GTP A 301  )
         E  <A 124   GLU    > matches  <A  21   GLU    >                        ( 14.7 A from    C3  GOL A 302  )
 
KERBm  3*FOUND in 1wyz  size =    3  ^    PUTATIVE S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANS     #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.4948 -0.4563  0.7396  0.8645  0.3451 -0.3654  0.0885 -0.8202 -0.5652   -32.674   -36.971    80.839              
         T  <A  34   THR    > matches  <A 210   THR    > 
         K  <A  60   LYS    > matches  <A 194   LYS    > 
         E  <A 124   GLU    > matches  <A 204   GLU    > 
 
KERBm  3*FOUND in 2vpz  size =    3  ^    THIOSULFATE REDUCTASE;                                  #    2                            
  RMSD =     1.69 A
  TRANSFORM    0.7589  0.6367  0.1365 -0.3618  0.5866 -0.7246  0.5414 -0.5005 -0.6755  -146.585   -24.270    60.461              
         T  <A  34   THR    > matches  <A 256   THR    >                        (  7.3 A from    O6  MGD A1766  )
         K  <A  60   LYS    > matches  <A 253   LYS    >                        ( 11.0 A from    O6  MGD A1766  )
         E  <A 124   GLU    > matches  <A 591   GLU    >                        ( 22.0 A from    N1  MGD A1766  )
 
KERBm  3*FOUND in 1i2k  size =    3  ^    4-AMINO-4-DEOXYCHORISMATE LYASE;                        #    2                            
  RMSD =     1.69 A
  TRANSFORM    0.7724 -0.5262  0.3556  0.3476 -0.1185 -0.9301 -0.5316 -0.8421 -0.0914     8.436    -4.848    46.433              
         T  <A  34   THR    > matches  <A  27   THR    >                        (  6.4 A from    O2P PLP A 301  )
         K  <A  60   LYS    > matches  <A 140   LYS    >                        ( -1.3 A from    C4A PLP A 301s )
         E  <A 124   GLU    > matches  <A  73   GLU    >                        ( 22.5 A from    O1P PLP A 301  )
 
KERBm  3*FOUND in 4p0p  size =    3  ^    CROSSOVER JUNCTION ENDONUCLEASE MUS81;                  #    1                            
  RMSD =     1.69 A
  TRANSFORM   -0.1649  0.9426 -0.2905  0.9860  0.1504 -0.0717  0.0239  0.2983  0.9542     6.538   -62.843    -2.342              
         T  <A  34   THR    > matches  <A 391   THR    >                        ( 15.7 A from   MG    MG A 601  )
         K  <A  60   LYS    > matches  <A 353   LYS    >                        ( 16.6 A from   MG    MG A 601  )
         E  <A 124   GLU    > matches  <B 409   GLU    >                        ( 22.2 A from   MG    MG A 601  )
 
KERBm  3*FOUND in 2pus  size =    3  ^    IBDV VP1 RNA-DEPENDANT RNA POLYMERASE;                  #    1                            
  RMSD =     1.69 A
  TRANSFORM    0.5877  0.0665 -0.8064 -0.4365 -0.8131 -0.3852  0.6812 -0.5784  0.4488   153.050     8.736   -34.794              
         T  <A  34   THR    > matches  <A 684   THR    > 
         K  <A  60   LYS    > matches  <A 682   LYS    > 
         E  <A 124   GLU    > matches  <A 151   GLU    > 
 
KERBm  3*FOUND in 3cqj  size =    3  ^    L-RIBULOSE-5-PHOSPHATE 3-EPIMERASE ULAE;                #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.3008  0.9493  0.0913  0.8503  0.2237  0.4764 -0.4318 -0.2209  0.8745   -13.012   -48.364    15.522              
         T  <A  34   THR    > matches  <A  67   THR    >                        ( 23.9 A from   ZN    ZN A 285  )
         K  <A  60   LYS    > matches  <A  29   LYS    >                        ( 26.5 A from   ZN    ZN A 285  )
         E  <A 124   GLU    > matches  <A  55   GLU    >                        ( 33.4 A from   ZN    ZN A 285  )
 
KERBm  3*FOUND in 4joq  size =    3  ^    ABC RIBOSE TRANSPORTER, PERIPLASMIC SOLUTE-BINDING      #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.6297  0.5054 -0.5900  0.4529  0.8558  0.2498 -0.6312  0.1099  0.7678    38.723    10.758    51.754              
         T  <A  34   THR    > matches  <A  71   THR    >                        ( 18.4 A from    OXT ACT A 401  )
         K  <A  60   LYS    > matches  <A  77   LYS    >                        ( 22.9 A from    OXT ACT A 401  )
         E  <A 124   GLU    > matches  <A 281   GLU    >                        ( 21.9 A from    O   ACT A 401  )
 
KERBm  3*FOUND in 3uem  size =    3  ^    PROTEIN DISULFIDE-ISOMERASE;                            #    2                            
  RMSD =     1.70 A
  TRANSFORM   -0.5654 -0.1561 -0.8099 -0.5511  0.8021  0.2301 -0.6137 -0.5764  0.5395    32.047    18.409     9.223              
         T  <A  34   THR    > matches  <A 325   THR    >                        ( 12.5 A from    C1  D1D A2815  )
         K  <A  60   LYS    > matches  <A 436   LYS    >                        ( 14.4 A from    C1  D1D A2815  )
         E  <A 124   GLU    > matches  <A 341   GLU    >                        ( 22.6 A from    O3  D1D A2815  )
 
KERBm  3*FOUND in 2a5y  size =    3  ^    APOPTOSIS REGULATOR CED-9;                              #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.4372  0.7944  0.4217 -0.4168 -0.5945  0.6876 -0.7969 -0.1248 -0.5910    13.906    -9.821   112.029              
         T  <A  34   THR    > matches  <B  49   THR    >                        ( 38.9 A from   MG    MG B 550  )
         K  <A  60   LYS    > matches  <A 215   LYS    >                        ( 43.4 A from   MG    MG B 550  )
         E  <A 124   GLU    > matches  <B  31   GLU    >                        ( 51.4 A from   MG    MG B 550  )
 
KERBm  3*FOUND in 1nkt  size =    3  ^    PREPROTEIN TRANSLOCASE SECA 1 SUBUNIT;                  #    2                            
  RMSD =     1.70 A
  TRANSFORM   -0.2578 -0.3308 -0.9078  0.8664  0.3367 -0.3688 -0.4276  0.8816 -0.1998   229.423     7.048    37.178              
         T  <A  34   THR    > matches  <A 259   THR    >                        ( 62.9 A from   MG    MG A 951  )
         K  <A  60   LYS    > matches  <A 257   LYS    >                        ( 62.5 A from   MG    MG A 951  )
         E  <A 124   GLU    > matches  <A 781   GLU    >                        ( 46.3 A from   MG    MG A 951  )
 
KERBm  3*FOUND in 1oxx  size =    3  ^    ABC TRANSPORTER, ATP BINDING PROTEIN;                   #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.8317  0.2809 -0.4789 -0.5546 -0.4610  0.6928  0.0261 -0.8418 -0.5392    37.166    -1.045    35.854              
         T  <A  34   THR    > matches  <K 193   THR    >                        ( 10.3 A from    I   IOD K1930  )
         K  <A  60   LYS    > matches  <K   1+  LYS    >                        (  8.0 A from    I   IOD K1930  )
         E  <A 124   GLU    > matches  <K 166   GLU    >                        ( 12.3 A from    I   IOD K1914  )
 
KERBm  3*FOUND in 3hj4  size =    3  ^    MINOR EDITOSOME-ASSOCIATED TUTASE;                      #    3                            
  RMSD =     1.70 A
  TRANSFORM   -0.4556  0.0315  0.8896  0.7894  0.4760  0.3875  0.4113 -0.8789  0.2418    60.939   -54.025     3.255              
         T  <A  34   THR    > matches  <A 206   THR    > 
         K  <A  60   LYS    > matches  <A 204   LYS    > 
         E  <A 124   GLU    > matches  <A 295   GLU    > 
 
KERBm  3*FOUND in 1p1j  size =    3  ^    INOSITOL-3-PHOSPHATE SYNTHASE;                          #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.1136 -0.7816  0.6134 -0.6472  0.5266  0.5511  0.7538  0.3344  0.5657    42.493   -43.289     5.744              
         T  <A  34   THR    > matches  <A 326   THR    >                        ( -3.8 A from    O1  PO4 A1700s )
         K  <A  60   LYS    > matches  <A 329   LYS    >                        (  7.1 A from    O1  PO4 A1700  )
         E  <A 124   GLU    > matches  <A 248   GLU    >                        (  6.1 A from    N6A NAI A 650  )
 
KERBm  3*FOUND in 4cc9  size =    3  ^    PROTEIN VPRBP;                                          #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.4107 -0.8390 -0.3570 -0.3368  0.5034 -0.7957 -0.8473  0.2066  0.4893    -6.020    13.304    21.984              
         T  <A  34   THR    > matches  <A1139   THR    >                        ( 13.2 A from   ZN    ZN B1112  )
         K  <A  60   LYS    > matches  <B  84   LYS    >                        ( 14.7 A from   ZN    ZN B1112  )
         E  <A 124   GLU    > matches  <B  16   GLU    >                        ( 23.3 A from    O1  PG4 A2394  )
 
KERBm  3*FOUND in 1pwh  size =    3  ^    L-SERINE DEHYDRATASE;                                   #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.4245 -0.8882 -0.1756  0.6120  0.4244 -0.6674 -0.6673 -0.1758 -0.7237   -32.952    27.195    17.436              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 11.9 A from    K     K A 332  )
         K  <A  60   LYS    > matches  <A 215   LYS    >                        ( 16.4 A from    C7  PLV A 328  )
         E  <A 124   GLU    > matches  <A 324   GLU    >                        ( 25.7 A from    C2A PLV A 328  )
 
KERBm  3*FOUND in 5gt5  size =    3  ^    PECTATE LYASE;                                          #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.4687 -0.1213  0.8750  0.7768 -0.4150 -0.4736 -0.4205 -0.9017  0.1003    22.842   -15.542    55.315              
         T  <A  34   THR    > matches  <A 155   THR    > 
         K  <A  60   LYS    > matches  <A 180   LYS    > 
         E  <A 124   GLU    > matches  <A  64   GLU    > 
 
KERBm  3*FOUND in 3i6d  size =    3  ^    PROTOPORPHYRINOGEN OXIDASE;                             #    2                            
  RMSD =     1.70 A
  TRANSFORM   -0.5785  0.7388  0.3458  0.6558  0.6733 -0.3414  0.4851 -0.0292  0.8740    33.916     0.147    14.997              
         T  <A  34   THR    > matches  <A 346   THR    >                        (  9.2 A from    O5  ACJ A 471  )
         K  <A  60   LYS    > matches  <A 351   LYS    >                        (  8.2 A from    O4  FAD A 600  )
         E  <A 124   GLU    > matches  <A 400   GLU    >                        ( 24.2 A from    C7M FAD A 600  )
 
KERBm  3*FOUND in 2dq0  size =    3  ^    SERYL-TRNA SYNTHETASE;                                  #    3                            
  RMSD =     1.70 A
  TRANSFORM   -0.8196  0.0542  0.5704  0.5567 -0.1605  0.8151 -0.1357 -0.9856 -0.1014    43.698   -41.519    13.214              
         T  <A  34   THR    > matches  <A 345   THR    >                        ( 17.5 A from    O2  SO4 A2005  )
         K  <A  60   LYS    > matches  <A  20   LYS    >                        ( 23.2 A from    O2S SSA A1001  )
         E  <A 124   GLU    > matches  <A 144   GLU    >                        ( 17.8 A from    O2  SO4 A2005  )
 
KERBm  3*FOUND in 4hes  size =    3  ^    BETA-LACTAMASE CLASS A-LIKE PROTEIN;                    #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.5411 -0.7887 -0.2920 -0.8369  0.4708  0.2792  0.0828 -0.3954  0.9148   144.791   -52.430    31.988              
         T  <A  34   THR    > matches  <A  41   THR    >                        ( 27.0 A from    O2  GOL A 302  )
         K  <A  60   LYS    > matches  <A   3   LYS    >                        ( 29.0 A from    C   FMT A 304  )
         E  <A 124   GLU    > matches  <A 145   GLU    >                        ( 15.5 A from    C1  GOL A 302  )
 
KERBm  3*FOUND in 3v0a  size =    3  ^    BONT/A;                                                 #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.0959 -0.0448 -0.9944  0.9219  0.3806  0.0717 -0.3753  0.9236 -0.0778    57.867  -102.690    16.531              
         T  <A  34   THR    > matches  <B 576   THR    >                        ( 27.0 A from    C6  MES B1203  )
         K  <A  60   LYS    > matches  <B 587   LYS    >                        ( 25.8 A from    O4  SO4 B1197  )
         E  <A 124   GLU    > matches  <B 975   GLU    >                        ( 23.5 A from    O3  SO4 B1198  )
 
KERBm  3*FOUND in 3e0j  size =    3  ^    DNA POLYMERASE SUBUNIT DELTA-2;                         #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.3824 -0.1759  0.9071 -0.6417  0.7569 -0.1238  0.6648  0.6294  0.4023   -26.445  -116.641  -102.020              
         T  <A  34   THR    > matches  <A 381   THR    > 
         K  <A  60   LYS    > matches  <A 389   LYS    > 
         E  <A 124   GLU    > matches  <A 298   GLU    > 
 
KERBm  3*FOUND in 4nuy  size =    3  ^    ENDO-BETA-N-ACETYLGLUCOSAMINIDASE F2;                   #    4                            
  RMSD =     1.70 A
  TRANSFORM   -0.7273 -0.4868 -0.4839  0.5884 -0.0792 -0.8047 -0.3534  0.8699 -0.3440     7.735    14.288    23.911              
         T  <A  34   THR    > matches  <A 713   THR    >                        ( 22.8 A from   CA    CA A1001  )
         K  <A  60   LYS    > matches  <A 727   LYS    >                        ( 29.0 A from   CA    CA A1001  )
         E  <A 124   GLU    > matches  <A 795   GLU    >                        ( 14.4 A from   CA    CA A1001  )
 
KERBm  3*FOUND in 3m8k  size =    3  ^    FTSZ/TUBULIN-RELATED PROTEIN;                           #    3                            
  RMSD =     1.70 A
  TRANSFORM   -0.2284  0.9229 -0.3101 -0.3917  0.2045  0.8971 -0.8913 -0.3263 -0.3148     4.574   -35.413   104.300              
         T  <A  34   THR    > matches  <A 317   THR    > 
         K  <A  60   LYS    > matches  <A 351   LYS    > 
         E  <A 124   GLU    > matches  <A 188   GLU    > 
 
KERBm  3*FOUND in 2o0r  size =    3  ^    RV0858C (N-SUCCINYLDIAMINOPIMELATE AMINOTRANSFERASE     #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.8783 -0.0743  0.4723 -0.4652  0.0952  0.8801  0.1104  0.9927 -0.0491   -13.988   -36.682    22.168              
         T  <A  34   THR    > matches  <A  95   THR    >                        (  3.5 A from    OP2 LLP A 232  )
         K  <A  60   LYS    > matches  <A 240   LYS    >                        (  2.7 A from    OP2 LLP A 232  )
         E  <A 124   GLU    > matches  <A 116   GLU    >                        ( 15.5 A from    C2' LLP A 232  )
 
KERBm  3*FOUND in 4eme  size =    3  ^    M18 ASPARTYL AMINOPEPTIDASE;                            #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.9936 -0.0874  0.0720  0.1129  0.7183 -0.6865 -0.0083 -0.6902 -0.7235    90.199    17.546   -15.219              
         T  <A  34   THR    > matches  <A 472   THR    >                        ( 15.0 A from   ZN    ZN A1001  )
         K  <A  60   LYS    > matches  <A 468   LYS    >                        ( 18.2 A from   ZN    ZN A1001  )
         E  <A 124   GLU    > matches  <A 458   GLU    >                        ( 22.4 A from   ZN    ZN A1001  )
 
KERBm  3*FOUND in 6ej2  size =    3  ^    BETA-SECRETASE 1;                                       #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.9058 -0.1725  0.3870 -0.3222 -0.8736  0.3647 -0.2752  0.4551  0.8469    25.260   -53.031    50.125              
         T  <A  34   THR    > matches  <A 738   THR    >                        (  9.3 A from    O21 B7E A 901  )
         K  <A  60   LYS    > matches  <A 633   LYS    >                        ( 10.3 A from    O21 B7E A 901  )
         E  <A 124   GLU    > matches  <A 674   GLU    >                        ( 21.4 A from    N29 B7E A 901  )
 
KERBm  3*FOUND in 1jr2  size =    3  ^    UROPORPHYRINOGEN-III SYNTHASE;                          #    2                            
  RMSD =     1.70 A
  TRANSFORM    0.0653 -0.9818 -0.1781 -0.2974 -0.1895  0.9357  0.9525  0.0081  0.3044    60.434   -25.007   -31.165              
         T  <A  34   THR    > matches  <A 202   THR    > 
         K  <A  60   LYS    > matches  <A 206   LYS    > 
         E  <A 124   GLU    > matches  <A 149   GLU    > 
 
KERBm  3*FOUND in 1mkz  size =    3  ^    MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN B;             #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.0298  0.7990  0.6006  0.8327 -0.3125  0.4572 -0.5530 -0.5137  0.6560   -18.606   -36.504    13.747              
         T  <A  34   THR    > matches  <A 131   THR    >                        (  9.1 A from    O2  SO4 A 304  )
         K  <A  60   LYS    > matches  <A 169   LYS    >                        ( -7.4 A from    OXT ACY A1201s )
         E  <A 124   GLU    > matches  <A  89   GLU    >                        ( 10.0 A from    O1  SO4 A 301  )
 
KERBm  3*FOUND in 4hdo  size =    3  ^    KREV INTERACTION TRAPPED PROTEIN 1;                     #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.6159  0.6291 -0.4742  0.0666 -0.6413 -0.7644  0.7850 -0.4392  0.4369   -20.931    -2.420     4.391              
         T  <A  34   THR    > matches  <A 588   THR    >                        ( 13.2 A from    O1  GOL A 801  )
         K  <A  60   LYS    > matches  <A 675   LYS    >                        (  8.3 A from    O1  GOL A 801  )
         E  <A 124   GLU    > matches  <A 604   GLU    >                        ( 28.1 A from    O1  GOL A 801  )
 
KERBm  3*FOUND in 2b0t  size =    3  ^    NADP ISOCITRATE DEHYDROGENASE;                          #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.1469  0.4021 -0.9037  0.9658 -0.1391 -0.2189  0.2137  0.9049  0.3679    55.846   -47.725     6.256              
         T  <A  34   THR    > matches  <A   9   THR    >                        ( 21.6 A from   MG    MG A 800  )
         K  <A  60   LYS    > matches  <A  80   LYS    >                        ( 16.6 A from   MG    MG A 800  )
         E  <A 124   GLU    > matches  <A 717   GLU    >                        ( 40.6 A from   MG    MG A 800  )
 
KERBm  3*FOUND in 2ght  size =    3  ^    CARBOXY-TERMINAL DOMAIN RNA POLYMERASE II               #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.4283 -0.6673  0.6094  0.9020 -0.3569  0.2431 -0.0553 -0.6538 -0.7547    29.490   -45.234    23.646              
         T  <A  34   THR    > matches  <A 152   THR    >                        (  7.5 A from   MG    MG A 257  )
         K  <A  60   LYS    > matches  <A 190   LYS    >                        (  5.4 A from   MG    MG A 257  )
         E  <A 124   GLU    > matches  <A 119   GLU    >                        ( 23.7 A from   MG    MG A 257  )
 
KERBm  3*FOUND in 3ed5  size =    3  ^    YFNB;                                                   #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.0001  0.9836 -0.1802  0.5413  0.1515  0.8271 -0.8408  0.0976  0.5324   -15.953   -20.922    23.110              
         T  <A  34   THR    > matches  <A 122   THR    >                        (  4.8 A from    O2  FMT A 237  )
         K  <A  60   LYS    > matches  <A 155   LYS    >                        ( -2.7 A from    O2  FMT A 237s )
         E  <A 124   GLU    > matches  <A  97   GLU    >                        ( 12.6 A from    C   FMT A 241  )
 
KERBm  3*FOUND in 4hlu  size =    3  ^    PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN TM_022     #    2                            
  RMSD =     1.70 A
  TRANSFORM   -0.9484 -0.3025 -0.0952 -0.0947 -0.0165  0.9954  0.3026 -0.9530  0.0129    92.417    17.015    39.656              
         T  <A  34   THR    > matches  <C1042   THR    >                        ( -3.4 A from    O1B ADP C1301s )
         K  <A  60   LYS    > matches  <C1046   LYS    >                        (  5.4 A from    N7  ADP C1301  )
         E  <A 124   GLU    > matches  <C1226   GLU    >                        ( 11.7 A from    O   ACT C1302  )
 
KERBm  3*FOUND in 1kut  size =    3  ^    PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYN     #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.1112  0.9773  0.1804  0.5491  0.0908 -0.8308  0.8284 -0.1915  0.5265    -3.661    17.662   -61.930              
         T  <A  34   THR    > matches  <A   7   THR    > 
         K  <A  60   LYS    > matches  <A  22   LYS    > 
         E  <A 124   GLU    > matches  <A 119   GLU    > 
 
KERBm  3*FOUND in 1qqp  size =    3  ^    PROTEIN (GENOME POLYPROTEIN);                           #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.5006 -0.8423  0.1999 -0.5875  0.5002  0.6361  0.6358 -0.2010  0.7452   -18.863   -68.993   -83.422              
         T  <A  34   THR    > matches  <3 156   THR    >                        ( 58.0 A from    O3SBIDX 1 705  )
         K  <A  60   LYS    > matches  <3 154   LYS    >                        ( 61.9 A from    O3SBIDX 1 705  )
         E  <A 124   GLU    > matches  <2 213   GLU    >                        ( 44.9 A from    O1SBIDX 1 705  )
 
KERBm  3*FOUND in 3khy  size =    3  ^    PROPIONATE KINASE;                                      #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.3178 -0.7642  0.5613  0.4554 -0.3962 -0.7973 -0.8317 -0.5089 -0.2221    -1.458    64.961    92.862              
         T  <A  34   THR    > matches  <A 218   THR    > 
         K  <A  60   LYS    > matches  <A 170   LYS    > 
         E  <A 124   GLU    > matches  <A 325   GLU    > 
 
KERBm  3*FOUND in 4czw  size =    3  ^    PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT     #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.2289  0.5744  0.7859  0.9729  0.1631  0.1642  0.0339 -0.8022  0.5961  -156.070   -61.962  -105.075              
         T  <A  34   THR    > matches  <A1065   THR    >                        ( 36.0 A from   ZN    ZN A3094  )
         K  <A  60   LYS    > matches  <A1068   LYS    >                        ( 38.7 A from   ZN    ZN A3094  )
         E  <A 124   GLU    > matches  <A 963   GLU    >                        ( 39.5 A from   ZN    ZN A3094  )
 
KERBm  3*FOUND in 5d68  size =    3  ^    KREV INTERACTION TRAPPED PROTEIN 1;                     #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.2284  0.9443  0.2370 -0.8424  0.0696  0.5344 -0.4881  0.3217 -0.8113     8.203    63.556    98.974              
         T  <A  34   THR    > matches  <A 588   THR    > 
         K  <A  60   LYS    > matches  <A 675   LYS    > 
         E  <A 124   GLU    > matches  <A 604   GLU    > 
 
KERBm  3*FOUND in 3sqw  size =    3  ^    ATP-DEPENDENT RNA HELICASE MSS116, MITOCHONDRIAL;       #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.5460  0.7722 -0.3249  0.0481 -0.3583 -0.9324  0.8364  0.5247 -0.1585    44.800    20.683   -53.819              
         T  <A  34   THR    > matches  <A 330   THR    >                        (  9.2 A from    O2B ANP A 800  )
         K  <A  60   LYS    > matches  <A 135   LYS    >                        ( 15.0 A from    O2B ANP A 800  )
         E  <A 124   GLU    > matches  <A 456   GLU    >                        ( 12.7 A from    O2G ANP A 800  )
 
KERBm  3*FOUND in 2kfn  size =    3  ^    5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3';                      #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.9114  0.2929 -0.2889 -0.1730 -0.9100 -0.3767  0.3733  0.2934 -0.8801   108.962    55.197    92.297              
         T  <A  34   THR    > matches  <A 639   THR    >                        ( 20.9 A from   ZN    ZN A 320  )
         K  <A  60   LYS    > matches  <A 643   LYS    >                        ( 26.7 A from   ZN    ZN A 320  )
         E  <A 124   GLU    > matches  <A 612   GLU    >                        ( 23.8 A from   ZN    ZN A 320  )
 
KERBm  3*FOUND in 4lxq  size =    3  ^    WLARD, A SUGAR 3N-FORMYL TRANSFERASE;                   #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.4021  0.9117  0.0843 -0.6628 -0.2263 -0.7138  0.6317  0.3429 -0.6953     5.899    -1.330    32.372              
         T  <A  34   THR    > matches  <A 149   THR    >                        ( 10.1 A from    O2  TYD A 302  )
         K  <A  60   LYS    > matches  <A 234   LYS    >                        ( 15.4 A from    O2  TYD A 302  )
         E  <A 124   GLU    > matches  <A 162   GLU    >                        ( 15.0 A from    O2  EDO A 304  )
 
KERBm  3*FOUND in 5oup  size =    3  ^    PERFORIN-LIKE PROTEIN 1;                                #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.0549  0.5118 -0.8574 -0.9942  0.0516  0.0945 -0.0926 -0.8576 -0.5060    15.127   -18.199    38.948              
         T  <A  34   THR    > matches  <A 734   THR    >                        ( 39.8 A from    O6  NAG A 901  )
         K  <A  60   LYS    > matches  <A 732   LYS    >                        ( 44.0 A from    O6  NAG A 901  )
         E  <A 124   GLU    > matches  <A 760   GLU    >                        ( 30.4 A from    C1  NAG A 901  )
 
KERBm  3*FOUND in 2gum  size =    3  ^    GLYCOPROTEIN B;                                         #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.3988  0.9069 -0.1358 -0.8849  0.3417 -0.3164  0.2405 -0.2464 -0.9389  -124.686   -12.538   127.256              
         T  <A  34   THR    > matches  <A 268   THR    >                        (114.9 A from   NA    NA A 731  )
         K  <A  60   LYS    > matches  <A 253   LYS    >                        (110.2 A from   NA    NA A 731  )
         E  <A 124   GLU    > matches  <A 195   GLU    >                        (112.6 A from   NA    NA A 731  )
 
KERBm  3*FOUND in 1dmu  size =    3  ^    DNA (5'-                                                #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.2358  0.8195 -0.5222  0.6280 -0.5386 -0.5617  0.7417  0.1955  0.6417    52.954    -8.272   -75.166              
         T  <A  34   THR    > matches  <A 294   THR    >                        ( 18.1 A from   CA    CA A 300  )
         K  <A  60   LYS    > matches  <A 234   LYS    >                        ( 20.4 A from   CA    CA A 300  )
         E  <A 124   GLU    > matches  <A  28   GLU    >                        ( 17.1 A from    S2  BME A 303  )
 
KERBm  3*FOUND in 1x6v  size =    3  ^    BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE      #    1                            
  RMSD =     1.70 A
  TRANSFORM    0.4107  0.9117 -0.0127 -0.0768  0.0485  0.9959 -0.9085  0.4080 -0.0899   -40.177   -12.874    38.218              
         T  <A  34   THR    > matches  <A 589   THR    >                        ( 17.1 A from   CL    CL A 700  )
         K  <A  60   LYS    > matches  <A 593   LYS    >                        ( 22.8 A from   CL    CL A 700  )
         E  <A 124   GLU    > matches  <A 502   GLU    >                        (  6.8 A from   CL    CL A 700  )
 
KERBm  3*FOUND in 1cid  size =    3  ^    T CELL SURFACE GLYCOPROTEIN CD4;                        #    2                            
  RMSD =     1.70 A
  TRANSFORM    0.0769 -0.7025 -0.7076 -0.6844 -0.5532  0.4749  0.7250 -0.4478  0.5233    65.941     1.434    34.802              
         T  <A  34   THR    > matches  <A  59   THR    >                        ( 45.6 A from    S   SO4 A 202  )
         K  <A  60   LYS    > matches  <A  57   LYS    >                        ( 50.6 A from    S   SO4 A 202  )
         E  <A 124   GLU    > matches  <A  35   GLU    >                        ( 28.4 A from    S   SO4 A 202  )
 
KERBm  3*FOUND in 4h3w  size =    3  ^    HYPOTHETICAL PROTEIN;                                   #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.8732  0.4313 -0.2269  0.1831  0.7219  0.6673 -0.4516 -0.5412  0.7094    37.553   -13.957    -4.984              
         T  <A  34   THR    > matches  <A 304   THR    >                        (  3.7 A from    N   MLY A 305  )
         K  <A  60   LYS    > matches  <A 306+  LYS    >                        (  3.0 A from    O   MLY A 305  )
         E  <A 124   GLU    > matches  <A 291   GLU    >                        (  3.9 A from    CH1 MLY A 293  )
 
KERBm  3*FOUND in 1ygp  size =    3  ^    YEAST GLYCOGEN PHOSPHORYLASE;                           #    1                            
  RMSD =     1.70 A
  TRANSFORM   -0.6328 -0.7737  0.0312 -0.7743  0.6323 -0.0239  0.0012  0.0393  0.9992   -38.076    93.493    38.449              
         T  <A  34   THR    > matches  <A 178   THR    >                        ( 17.7 A from    C2A PLP A 860  )
         K  <A  60   LYS    > matches  <A 169   LYS    >                        ( 17.0 A from    C2A PLP A 860  )
         E  <A 124   GLU    > matches  <A 273   GLU    >                        ( 24.8 A from    O2  PO4 A 859  )
 
KERBm  3*FOUND in 2bzv  size =    3  ^    FIBER PROTEIN 2;                                        #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.2781 -0.9575  0.0763 -0.6595  0.1326 -0.7399 -0.6983  0.2561  0.6684    44.362   -15.271    37.241              
         T  <A  34   THR    > matches  <A 268   THR    > 
         K  <A  60   LYS    > matches  <A 270   LYS    > 
         E  <A 124   GLU    > matches  <A 310   GLU    > 
 
KERBm  3*FOUND in 3dcy  size =    3  ^    REGULATOR PROTEIN;                                      #    2                            
  RMSD =     1.71 A
  TRANSFORM    0.2421  0.8886  0.3897  0.9056 -0.0628 -0.4193  0.3481 -0.4544  0.8199    -6.455   -18.589    33.998              
         T  <A  34   THR    > matches  <A 211   THR    >                        ( 21.0 A from    O2  PO4 A 271  )
         K  <A  60   LYS    > matches  <A 214   LYS    >                        ( 26.6 A from    O2  PO4 A 271  )
         E  <A 124   GLU    > matches  <A 113   GLU    >                        ( 20.5 A from    O3  PO4 A 271  )
 
KERBm  3*FOUND in 3n9y  size =    3  ^    CHOLESTEROL SIDE-CHAIN CLEAVAGE ENZYME;                 #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.7471 -0.5599  0.3583 -0.0622  0.5956  0.8009  0.6618 -0.5760  0.4798    27.819    -8.634     4.408              
         T  <A  34   THR    > matches  <A 456   THR    >                        ( 12.8 A from    C19 CLR A 602  )
         K  <A  60   LYS    > matches  <A  34   LYS    >                        ( 15.3 A from    C2  CLR A 602  )
         E  <A 124   GLU    > matches  <A 432   GLU    >                        (  5.9 A from    CMC HEM A 601  )
 
KERBm  3*FOUND in 1doa  size =    3  ^    PROTEIN (GTP-BINDING PROTEIN);                          #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.5716  0.6170 -0.5409 -0.3605 -0.4034 -0.8410  0.7371 -0.6757  0.0081     9.739    50.969   -24.071              
         T  <A  34   THR    > matches  <B 197   THR    > 
         K  <A  60   LYS    > matches  <B 199   LYS    > 
         E  <A 124   GLU    > matches  <B  95   GLU    > 
 
KERBm  3*FOUND in 2j5v  size =    3  ^    GLUTAMATE 5-KINASE;                                     #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.9242  0.3152  0.2157 -0.1021 -0.3404  0.9347 -0.3680  0.8859  0.2824    31.192     3.303    -5.933              
         T  <A  34   THR    > matches  <A 216   THR    >                        (  6.1 A from    OA1 RGP A1370  )
         K  <A  60   LYS    > matches  <A 214+  LYS    >                        (  9.1 A from    O1  SO4 A1371  )
         E  <A 124   GLU    > matches  <A 277   GLU    >                        ( 20.8 A from    O   RGP A1370  )
 
KERBm  3*FOUND in 1eu8  size =    3  ^    TREHALOSE/MALTOSE BINDING PROTEIN;                      #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.7117  0.6996  0.0638  0.0644 -0.0254  0.9976 -0.6995 -0.7141  0.0270     3.170   -79.589   127.559              
         T  <A  34   THR    > matches  <A 238   THR    >                        (  7.4 A from    O6  TRE A 563  )
         K  <A  60   LYS    > matches  <A 175   LYS    >                        ( 11.3 A from    O6  TRE A 563  )
         E  <A 124   GLU    > matches  <A  19   GLU    >                        ( 13.8 A from    O4P TRE A 563  )
 
KERBm  3*FOUND in 6gkv  size =    3  ^    COCLAURINE N-METHYLTRANSFERASE;                         #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.3609 -0.9047 -0.2264  0.8715 -0.2407 -0.4272 -0.3320  0.3515 -0.8754    56.821   -23.244    -2.783              
         T  <A  34   THR    > matches  <A 189   THR    >                        (  5.0 A from    N6  SAH A 501  )
         K  <A  60   LYS    > matches  <A  68   LYS    >                        ( 10.6 A from    N6  SAH A 501  )
         E  <A 124   GLU    > matches  <A 182   GLU    >                        ( 15.8 A from    C2  SAH A 501  )
 
KERBm  3*FOUND in 3tix  size =    3  ^    UBIQUITIN-LIKE PROTEIN SMT3,RNA-INDUCED TRANSCRIPTI     #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.6885  0.2397  0.6845  0.6202  0.2945 -0.7270  0.3758 -0.9251 -0.0541    12.447    11.197     4.057              
         T  <A  34   THR    > matches  <B 758   THR    >                        ( 14.0 A from    K     K B1001  )
         K  <A  60   LYS    > matches  <B 761   LYS    >                        ( 14.9 A from    K     K B1001  )
         E  <A 124   GLU    > matches  <B 934   GLU    >                        ( 32.5 A from    K     K B1001  )
 
KERBm  3*FOUND in 1ck7  size =    3  ^    PROTEIN (GELATINASE A);                                 #    2                            
  RMSD =     1.71 A
  TRANSFORM   -0.9792 -0.1007 -0.1763 -0.0798 -0.6078  0.7900  0.1867 -0.7877 -0.5871   122.222   -42.674   166.615              
         T  <A  34   THR    > matches  <A 262   THR    >                        ( 33.3 A from   CA    CA A 992  )
         K  <A  60   LYS    > matches  <A 270   LYS    >                        ( 38.3 A from   CA    CA A 992  )
         E  <A 124   GLU    > matches  <A 539   GLU    >                        ( 16.9 A from   CA    CA A 994  )
 
KERBm  3*FOUND in 2zgi  size =    3  ^    PUTATIVE 4-AMINO-4-DEOXYCHORISMATE LYASE;               #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.2593  0.7996 -0.5416 -0.9554  0.2944 -0.0228 -0.1412 -0.5234 -0.8403    57.903   -31.180    56.417              
         T  <A  34   THR    > matches  <A  26   THR    >                        (  6.3 A from    O1P PLP A 248  )
         K  <A  60   LYS    > matches  <A 126   LYS    >                        ( -1.7 A from    C4A PLP A 248s )
         E  <A 124   GLU    > matches  <A  67   GLU    >                        ( 24.2 A from    O1P PLP A 248  )
 
KERBm  3*FOUND in 2qgm  size =    3  ^    SUCCINOGLYCAN BIOSYNTHESIS PROTEIN;                     #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.2473 -0.1953  0.9491 -0.8292 -0.4641 -0.3116 -0.5013  0.8640  0.0471   -12.979    44.863   -25.199              
         T  <A  34   THR    > matches  <A 268   THR    > 
         K  <A  60   LYS    > matches  <A 227   LYS    > 
         E  <A 124   GLU    > matches  <A 330   GLU    > 
 
KERBm  3*FOUND in 4paa  size =    3  ^    DIMETHYLGLYCINE DEHYDROGENASE;                          #    3                            
  RMSD =     1.71 A
  TRANSFORM    0.3991 -0.8804 -0.2562  0.3951 -0.0870  0.9145  0.8274  0.4662 -0.3131    58.684   -32.443    45.744              
         T  <A  34   THR    > matches  <A 769   THR    >                        ( 19.7 A from    OX2 THG A 902  )
         K  <A  60   LYS    > matches  <A 804   LYS    >                        ( 24.9 A from    OX1 THG A 902  )
         E  <A 124   GLU    > matches  <A 814   GLU    >                        ( 27.3 A from    OX2 THG A 902  )
 
KERBm  3*FOUND in 2gy5  size =    3  ^    ANGIOPOIETIN-1 RECEPTOR;                                #    2                            
  RMSD =     1.71 A
  TRANSFORM   -0.7143 -0.6542 -0.2485 -0.5605  0.3222  0.7629  0.4190 -0.6842  0.5969   126.580   -14.635    -8.686              
         T  <A  34   THR    > matches  <A 115   THR    >                        ( 13.1 A from    O1  SO4 A   1  )
         K  <A  60   LYS    > matches  <A 117   LYS    >                        ( 19.4 A from    O4  SO4 A   3  )
         E  <A 124   GLU    > matches  <A 235   GLU    >                        (  9.8 A from    O1  SO4 A   1  )
 
KERBm  3*FOUND in 3a1c  size =    3  ^    PROBABLE COPPER-EXPORTING P-TYPE ATPASE A;              #    2                            
  RMSD =     1.71 A
  TRANSFORM    0.2195  0.5873  0.7791  0.6167  0.5352 -0.5772  0.7560 -0.6072  0.2447   -42.476   -43.983   -34.865              
         T  <A  34   THR    > matches  <A 572   THR    >                        ( -3.7 A from    O2G ACP A 997s )
         K  <A  60   LYS    > matches  <A 600   LYS    >                        (  2.6 A from    O3G ACP A 997s )
         E  <A 124   GLU    > matches  <A 522   GLU    >                        ( 17.4 A from    O2' ACP A 997  )
 
KERBm  3*FOUND in 2fq4  size =    3  ^    TRANSCRIPTIONAL REGULATOR, TETR FAMILY;                 #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.7926 -0.3863  0.4717  0.5989 -0.3479  0.7213  0.1146 -0.8542 -0.5071    48.835    -7.982    59.883              
         T  <A  34   THR    > matches  <A  48   THR    > 
         K  <A  60   LYS    > matches  <A  51   LYS    > 
         E  <A 124   GLU    > matches  <A  27   GLU    > 
 
KERBm  3*FOUND in 2oqe  size =    3  ^    PEROXISOMAL COPPER AMINE OXIDASE;                       #    3                            
  RMSD =     1.71 A
  TRANSFORM   -0.4095  0.7808 -0.4719 -0.6455 -0.6135 -0.4550  0.6447 -0.1183 -0.7552    67.859    27.617   -33.580              
         T  <A  34   THR    > matches  <A 255   THR    >                        ( 10.5 A from    O3  GOL A4007  )
         K  <A  60   LYS    > matches  <A 253   LYS    >                        ( 13.3 A from    O3  GOL A4007  )
         E  <A 124   GLU    > matches  <A  32   GLU    >                        ( 16.7 A from    C3  GOL A4007  )
 
KERBm  3*FOUND in 2q99  size =    3  ^    SACCHAROPINE DEHYDROGENASE [NAD+, L-LYSINE-FORMING;     #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.7647  0.6308  0.1320  0.4909 -0.4373 -0.7535  0.4175 -0.6410  0.6440   -66.882    11.748    -8.835              
         T  <A  34   THR    > matches  <A  25   THR    > 
         K  <A  60   LYS    > matches  <A  28   LYS    > 
         E  <A 124   GLU    > matches  <A 122   GLU    > 
 
KERBm  3*FOUND in 5i0n  size =    3  ^    PHOSPHATIDYLINOSITOL 4-KINASE TYPE 2-ALPHA,LYSOZYME     #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.2921  0.9131  0.2843  0.2797  0.2027 -0.9384  0.9146 -0.3537  0.1962    11.503     7.603    20.194              
         T  <A  34   THR    > matches  <A 431   THR    >                        ( 17.4 A from    H1' ATP A1202  )
         K  <A  60   LYS    > matches  <A 435   LYS    >                        ( 20.4 A from    H1' ATP A1202  )
         E  <A 124   GLU    > matches  <A 452   GLU    >                        ( 19.2 A from   HO2' ATP A1202  )
 
KERBm  3*FOUND in 3wwt  size =    3  ^    SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 1-     #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.9398 -0.2385 -0.2447 -0.1934 -0.2189  0.9564  0.2817 -0.9461 -0.1596    -3.208    17.641    35.672              
         T  <A  34   THR    > matches  <B 102   THR    >                        ( 29.7 A from   CA    CA A 201  )
         K  <A  60   LYS    > matches  <B 106   LYS    >                        ( 34.3 A from   CA    CA A 201  )
         E  <A 124   GLU    > matches  <A  96   GLU    >                        ( 22.1 A from   CA    CA A 201  )
 
KERBm  3*FOUND in 4f9t  size =    3  ^    50S RIBOSOMAL PROTEIN L1;                               #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.8626  0.1778 -0.4737  0.4955 -0.4864  0.7197  0.1025  0.8555  0.5076    -6.703   -12.308     7.491              
         T  <A  34   THR    > matches  <A 116   THR    >                        (  9.0 A from    O4  SO4 A 305  )
         K  <A  60   LYS    > matches  <A  82   LYS    >                        (-11.1 A from    C5  MRD A 304s )
         E  <A 124   GLU    > matches  <A  42   GLU    >                        (  7.0 A from    C3 AMPD A 303  )
 
KERBm  3*FOUND in 4qc6  size =    3  ^    BIFUNCTIONAL AAC/APH;                                   #    2                            
  RMSD =     1.71 A
  TRANSFORM    0.7452  0.0842 -0.6615  0.2130  0.9100  0.3558 -0.6319  0.4060 -0.6602    48.293     6.915    39.563              
         T  <A  34   THR    > matches  <A 114   THR    >                        ( -3.5 A from    O2A 30N A 202s )
         K  <A  60   LYS    > matches  <A 118   LYS    >                        (  8.1 A from    O2A 30N A 202  )
         E  <A 124   GLU    > matches  <A  32   GLU    >                        (  9.1 A from    C7P 30N A 202  )
 
KERBm  3*FOUND in 4f7b  size =    3  ^    LYSOSOME MEMBRANE PROTEIN 2;                            #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.3869 -0.6261 -0.6770 -0.2065  0.7743 -0.5981 -0.8987  0.0916  0.4289   -27.478   -18.510    21.849              
         T  <A  34   THR    > matches  <A 251   THR    >                        (  8.4 A from    C1  PEG A 722  )
         K  <A  60   LYS    > matches  <A 227   LYS    >                        (  7.5 A from    O6  NAG A 710  )
         E  <A 124   GLU    > matches  <A 364   GLU    >                        (  9.9 A from    C6  NAG A 705  )
 
KERBm  3*FOUND in 2y4d  size =    3  ^    PEROXIDASE YCDB;                                        #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.8909  0.4510  0.0545  0.0211 -0.0788  0.9967 -0.4538 -0.8891 -0.0607    27.956    10.076    95.013              
         T  <A  34   THR    > matches  <A 191   THR    >                        (  0.8 A from    CB  THR A 191  )
         K  <A  60   LYS    > matches  <A 199   LYS    >                        (  0.0 A from    NZ  LYS A 199  )
         E  <A 124   GLU    > matches  <A  17   GLU    >                        ( -0.5 A from    CD  GLU A  17s )
 
KERBm  3*FOUND in 4ap5  size =    3  ^    GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2;              #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.8849 -0.4656 -0.0124  0.4594 -0.8769  0.1417  0.0768 -0.1197 -0.9898    46.814   -39.676    -2.073              
         T  <A  34   THR    > matches  <A  72   THR    >                        ( 23.7 A from    O6  NAG A1430  )
         K  <A  60   LYS    > matches  <A  75   LYS    >                        ( 27.7 A from    O6  NAG A1430  )
         E  <A 124   GLU    > matches  <A 221   GLU    >                        ( 16.7 A from   CL    CL A1432  )
 
KERBm  3*FOUND in 1xx1  size =    3  ^    SPHINGOMYELINASE I;                                     #    2                            
  RMSD =     1.71 A
  TRANSFORM   -0.7293  0.6837  0.0275 -0.3367 -0.3936  0.8554 -0.5956 -0.6145 -0.5172    52.410     6.396    28.540              
         T  <A  34   THR    > matches  <A  36   THR    >                        ( 10.3 A from   MG    MG A9001  )
         K  <A  60   LYS    > matches  <A  38   LYS    >                        ( 10.8 A from    O2  SO4 A5001  )
         E  <A 124   GLU    > matches  <A  72   GLU    >                        ( 10.7 A from    O8  EPE A2001  )
 
KERBm  3*FOUND in 5odq  size =    3  ^    HETERODISULFIDE REDUCTASE, SUBUNIT A;                   #    2                            
  RMSD =     1.71 A
  TRANSFORM   -0.7737  0.6320 -0.0433  0.5044  0.6559  0.5615 -0.3833 -0.4126  0.8263    49.424   -52.707    15.003              
         T  <A  34   THR    > matches  <A 421   THR    >                        (  6.1 A from    O   ACT A 702  )
         K  <A  60   LYS    > matches  <A 415   LYS    >                        ( 11.7 A from    O   ACT A 702  )
         E  <A 124   GLU    > matches  <A 462   GLU    >                        ( 17.4 A from    O2  GOL A 710  )
 
KERBm  3*FOUND in 5kod  size =    3  ^    INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.5;            #    3                            
  RMSD =     1.71 A
  TRANSFORM    0.2473  0.3953 -0.8846  0.8491  0.3514  0.3944 -0.4668  0.8487  0.2487    23.368   -93.532   -81.252              
         T  <A  34   THR    > matches  <A  32   THR    >                        ( 18.3 A from    N6  AMP A 701  )
         K  <A  60   LYS    > matches  <A 435   LYS    >                        ( 19.7 A from    N6  AMP A 701  )
         E  <A 124   GLU    > matches  <A  45   GLU    >                        ( 23.7 A from    O3P AMP A 701  )
 
KERBm  3*FOUND in 3m62  size =    3  ^    UBIQUITIN CONJUGATION FACTOR E4;                        #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.1892 -0.8669 -0.4611 -0.5763 -0.2821  0.7670  0.7950 -0.4109  0.4462    29.712   -16.068   -14.789              
         T  <A  34   THR    > matches  <A 807   THR    >                        ( 45.1 A from    C14 1PE A 962  )
         K  <A  60   LYS    > matches  <A 804   LYS    >                        ( 43.4 A from    C14 1PE A 962  )
         E  <A 124   GLU    > matches  <A 866   GLU    >                        ( 58.0 A from    C25 1PE A 962  )
 
KERBm  3*FOUND in 4mvf  size =    3  ^    CALCIUM-DEPENDENT PROTEIN KINASE 2;                     #    2                            
  RMSD =     1.71 A
  TRANSFORM   -0.1853  0.8204 -0.5409  0.1214 -0.5271 -0.8411  0.9752  0.2215  0.0020    -9.377    66.036   -28.088              
         T  <A  34   THR    > matches  <A 316   THR    >                        ( 16.9 A from   CA    CA A 602  )
         K  <A  60   LYS    > matches  <A 248   LYS    >                        ( 20.6 A from    C1  GOL A 605  )
         E  <A 124   GLU    > matches  <A 394   GLU    >                        ( -2.2 A from   CA    CA A 602s )
 
KERBm  3*FOUND in 1kv9  size =    3  ^    TYPE II QUINOHEMOPROTEIN ALCOHOL DEHYDROGENASE;         #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.4849  0.0518 -0.8731 -0.3236 -0.9168 -0.2341  0.8125 -0.3960  0.4277    22.884   -18.256    15.952              
         T  <A  34   THR    > matches  <A 299   THR    >                        (  6.4 A from    N6  PQQ A 801  )
         K  <A  60   LYS    > matches  <A 322   LYS    >                        (  2.6 A from    O5  PQQ A 801s )
         E  <A 124   GLU    > matches  <A 206   GLU    >                        ( 18.1 A from    O7B PQQ A 801  )
 
KERBm  3*FOUND in 3irp  size =    3  ^    URO-ADHERENCE FACTOR A;                                 #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.3726  0.3737  0.8494  0.3625 -0.7840  0.5039 -0.8543 -0.4957 -0.1566    11.501   -30.968     6.986              
         T  <A  34   THR    > matches  <X 736   THR    >                        ( 17.2 A from    K     K X   4  )
         K  <A  60   LYS    > matches  <X 392+  LYS    >                        ( 17.4 A from    K     K X   4  )
         E  <A 124   GLU    > matches  <X 784   GLU    >                        ( -3.6 A from    O3  GOL X1001s )
 
KERBm  3*FOUND in 3oba  size =    3  ^    BETA-GALACTOSIDASE;                                     #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.1395  0.6896 -0.7106  0.2668  0.6649  0.6976 -0.9536  0.2869  0.0912    21.470    31.136    31.826              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( 34.0 A from   MN   MN3 A2001  )
         K  <A  60   LYS    > matches  <A 173   LYS    >                        ( 39.9 A from   MN   MN3 A2001  )
         E  <A 124   GLU    > matches  <A 614   GLU    >                        ( 22.8 A from   MN   MN3 A2001  )
 
KERBm  3*FOUND in 2qma  size =    3  ^    DIAMINOBUTYRATE-PYRUVATE TRANSAMINASE AND L-2,4-        #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.4765 -0.8423  0.2520 -0.8070 -0.3053  0.5055  0.3489  0.4442  0.8252    49.227    25.913   -32.367              
         T  <A  34   THR    > matches  <A 791   THR    >                        ( 21.8 A from    O2  EDO A 961  )
         K  <A  60   LYS    > matches  <A 840   LYS    >                        ( 20.0 A from    O2  EDO A 961  )
         E  <A 124   GLU    > matches  <A 511   GLU    >                        ( 38.3 A from    O2  EDO A 961  )
 
KERBm  3*FOUND in 2ozt  size =    3  ^    TLR1174 PROTEIN;                                        #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.9256  0.2341 -0.2973  0.2362 -0.9713 -0.0293  0.2956  0.0432  0.9543    15.205    41.877   -30.831              
         T  <A  34   THR    > matches  <A  71   THR    >                        ( 38.3 A from   NA    NA A 701  )
         K  <A  60   LYS    > matches  <A   0+  LYS    >                        ( 40.1 A from   NA    NA A 701  )
         E  <A 124   GLU    > matches  <A  80   GLU    >                        ( 23.1 A from   NA    NA A 701  )
 
KERBm  3*FOUND in 1l1l  size =    3  ^    RIBONUCLEOSIDE TRIPHOSPHATE REDUCTASE;                  #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.0689 -0.6535  0.7538 -0.7528  0.4618  0.4691  0.6546  0.5998  0.4601     0.644   -17.841   -49.307              
         T  <A  34   THR    > matches  <A 552   THR    > 
         K  <A  60   LYS    > matches  <A 555   LYS    > 
         E  <A 124   GLU    > matches  <A 156   GLU    > 
 
KERBm  3*FOUND in 1pq4  size =    3  ^    PERIPLASMIC BINDING PROTEIN COMPONENT OF AN ABC TYP     #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.9236 -0.3684  0.1058  0.0587  0.4088  0.9108  0.3787  0.8350 -0.3992    19.929   -17.162    24.716              
         T  <A  34   THR    > matches  <A 193   THR    >                        ( 20.8 A from   ZN    ZN A1002  )
         K  <A  60   LYS    > matches  <A 196   LYS    >                        ( 27.4 A from   ZN    ZN A1002  )
         E  <A 124   GLU    > matches  <A 136   GLU    >                        ( 17.0 A from   ZN    ZN A1002  )
 
KERBm  3*FOUND in 1l5w  size =    3  ^    MALTODEXTRIN PHOSPHORYLASE;                             #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.5252  0.7745 -0.3525 -0.7188  0.1820 -0.6710  0.4555 -0.6058 -0.6523    63.767    53.413    86.733              
         T  <A  34   THR    > matches  <A 633   THR    >                        ( 11.9 A from    O6  GLC A 994  )
         K  <A  60   LYS    > matches  <A 636   LYS    >                        (  9.4 A from    O6  GLC A 994  )
         E  <A 124   GLU    > matches  <A 711   GLU    >                        ( 21.9 A from    C1  GLC A 994  )
 
KERBm  3*FOUND in 1iv8  size =    3  ^    MALTOOLIGOSYL TREHALOSE SYNTHASE;                       #    1                            
  RMSD =     1.71 A
  TRANSFORM    0.9595 -0.1319 -0.2490 -0.2359  0.1072 -0.9659 -0.1541 -0.9854 -0.0717    18.316    -2.324    94.917              
         T  <A  34   THR    > matches  <A 522   THR    >                        (  6.7 A from    CA  MLZ A 519  )
         K  <A  60   LYS    > matches  <A 520+  LYS    >                        (  3.3 A from    C   MLZ A 519  )
         E  <A 124   GLU    > matches  <A 505   GLU    >                        (  3.3 A from    NZ  MLZ A 508  )
 
KERBm  3*FOUND in 1r0v  size =    3  ^    TRNA-INTRON ENDONUCLEASE;                               #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.3679 -0.9030  0.2218  0.9277 -0.3726  0.0218 -0.0630 -0.2138 -0.9749     5.799   -37.594    21.078              
         T  <A  34   THR    > matches  <A 180   THR    > 
         K  <A  60   LYS    > matches  <A 175   LYS    > 
         E  <A 124   GLU    > matches  <A 211   GLU    > 
 
KERBm  3*FOUND in 4rkn  size =    3  ^    MCCA;                                                   #    1                            
  RMSD =     1.71 A
  TRANSFORM   -0.1069  0.5817 -0.8063  0.6611 -0.5641 -0.4946  0.7426  0.5859  0.3243   112.918   -23.550   -33.709              
         T  <A  34   THR    > matches  <A 130   THR    >                        ( 11.6 A from    CBC HEM A 905  )
         K  <A  60   LYS    > matches  <A 309   LYS    >                        (  8.0 A from    CBC HEM A 905  )
         E  <A 124   GLU    > matches  <A  95   GLU    >                        ( 14.2 A from    O2  DTN A 901  )
 
KERBm  3*FOUND in 3gwq  size =    3  ^    D-SERINE DEAMINASE;                                     #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.6951  0.7015  0.1573  0.7039  0.6196  0.3473 -0.1462 -0.3521  0.9245    25.796   -50.524     1.585              
         T  <A  34   THR    > matches  <A  92   THR    >                        ( 14.3 A from    C3  GOL A 426  )
         K  <A  60   LYS    > matches  <A  60   LYS    >                        ( 18.0 A from    C3  GOL A 426  )
         E  <A 124   GLU    > matches  <A 139   GLU    >                        ( 13.4 A from    O3  GOL A 426  )
 
KERBm  3*FOUND in 2ayu  size =    3  ^    NUCLEOSOME ASSEMBLY PROTEIN;                            #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.2691  0.6441  0.7161 -0.7403 -0.6139  0.2740 -0.6160  0.4564 -0.6420   -65.294    64.771    33.589              
         T  <A  34   THR    > matches  <A 244   THR    > 
         K  <A  60   LYS    > matches  <A 277   LYS    > 
         E  <A 124   GLU    > matches  <A 220   GLU    > 
 
KERBm  3*FOUND in 2ix5  size =    3  ^    ACYL-COENZYME A OXIDASE 4, PEROXISOMAL;                 #    2                            
  RMSD =     1.72 A
  TRANSFORM    0.7360 -0.4291 -0.5235  0.0296  0.7931 -0.6084 -0.6763 -0.4323 -0.5965    -1.157   -22.006    49.577              
         T  <A  34   THR    > matches  <A 188   THR    >                        ( 11.2 A from    O2  FAD A1433  )
         K  <A  60   LYS    > matches  <A 203   LYS    >                        (  7.3 A from    O2  FAD A1433  )
         E  <A 124   GLU    > matches  <A 194   GLU    >                        ( 30.0 A from    O2  FAD A1433  )
 
KERBm  3*FOUND in 5xlu  size =    3  ^    GAMMA GLUTAMYL TRANSPEPTIDASE;                          #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.5857  0.6503  0.4839 -0.7889  0.5944  0.1560  0.1862  0.4731 -0.8611    38.241   -21.396     7.796              
         T  <A  34   THR    > matches  <B 417   THR    >                        ( -3.4 A from    C5  AVN B 602s )
         K  <A  60   LYS    > matches  <B 399+  LYS    >                        ( -4.7 A from    C4  AVN B 602s )
         E  <A 124   GLU    > matches  <A 265   GLU    >                        ( 21.5 A from    O2  AVN B 602  )
 
KERBm  3*FOUND in 4qen  size =    3  ^    HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPE     #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.5227  0.8477 -0.0909  0.6519  0.4661  0.5981 -0.5494 -0.2533  0.7962     2.303    -8.451    16.679              
         T  <A  34   THR    > matches  <A 218   THR    >                        ( 44.7 A from   ZN    ZN A 805  )
         K  <A  60   LYS    > matches  <A 297   LYS    >                        ( 48.0 A from   ZN    ZN A 805  )
         E  <A 124   GLU    > matches  <A 308   GLU    >                        ( 29.4 A from   ZN    ZN A 805  )
 
KERBm  3*FOUND in 5i1v  size =    3  ^    CRMK;                                                   #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.7984  0.2976  0.5234  0.5984 -0.4876 -0.6357 -0.0661 -0.8208  0.5674   -12.281    82.315    16.921              
         T  <A  34   THR    > matches  <A   8   THR    >                        ( 18.2 A from    N6A FAD A 600  )
         K  <A  60   LYS    > matches  <A  10   LYS    >                        ( 21.5 A from    O2B FAD A 600  )
         E  <A 124   GLU    > matches  <A  99   GLU    >                        ( 11.0 A from    N6A FAD A 600  )
 
KERBm  3*FOUND in 4mj2  size =    3  ^    ALPHA-L-IDURONIDASE;                                    #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.2433 -0.1762  0.9538 -0.0835  0.9835  0.1604  0.9664  0.0406  0.2540    38.185  -321.636   134.447              
         T  <A  34   THR    > matches  <A 364   THR    >                        (  9.9 A from   CL    CL A 910  )
         K  <A  60   LYS    > matches  <A 384   LYS    >                        (  9.3 A from   CL    CL A 910  )
         E  <A 124   GLU    > matches  <A 178   GLU    >                        ( 18.1 A from   CL    CL A 910  )
 
KERBm  3*FOUND in 5i34  size =    3  ^    ADENYLOSUCCINATE SYNTHETASE;                            #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.5972  0.2548 -0.7605  0.0993  0.9174  0.3853 -0.7959  0.3057 -0.5226    25.996   -62.469    53.651              
         T  <A  34   THR    > matches  <A 139   THR    >                        ( -2.9 A from    O2P IMP A 502s )
         K  <A  60   LYS    > matches  <A 141   LYS    >                        (  7.7 A from    O2P IMP A 502  )
         E  <A 124   GLU    > matches  <A 286   GLU    >                        ( 12.6 A from   HO2' IMP A 502  )
 
KERBm  3*FOUND in 2iw3  size =    3  ^    ELONGATION FACTOR 3A;                                   #    5                            
  RMSD =     1.72 A
  TRANSFORM   -0.5095  0.7522  0.4179  0.3791  0.6322 -0.6757  0.7725  0.1858  0.6073   145.121    85.395  -205.878              
         T  <A  34   THR    > matches  <A 808   THR    >                        (  9.6 A from    O1  SO4 A1977  )
         K  <A  60   LYS    > matches  <A 804   LYS    >                        ( -4.6 A from    O1  SO4 A1977s )
         E  <A 124   GLU    > matches  <A 777   GLU    >                        ( 24.3 A from    O4  SO4 A1977  )
 
KERBm  3*FOUND in 3gmi  size =    3  ^    UPF0348 PROTEIN MJ0951;                                 #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.1541  0.6333  0.7584 -0.5486  0.5836 -0.5987  0.8218  0.5083 -0.2575    26.309    19.662   -12.438              
         T  <A  34   THR    > matches  <A 336   THR    >                        ( 19.3 A from    O9  MLI A 401  )
         K  <A  60   LYS    > matches  <A  26   LYS    >                        ( 25.0 A from    O9  MLI A 401  )
         E  <A 124   GLU    > matches  <A 297   GLU    >                        ( 19.7 A from    O8  MLI A 401  )
 
KERBm  3*FOUND in 1sdd  size =    3  ^    COAGULATION FACTOR V;                                   #    2                            
  RMSD =     1.72 A
  TRANSFORM   -0.5427  0.0156 -0.8398  0.2950  0.9397 -0.1732 -0.7864  0.3418  0.5146    37.150   -53.008    -1.196              
         T  <A  34   THR    > matches  <B1572   THR    >                        ( 22.3 A from   CU    CU B2190  )
         K  <A  60   LYS    > matches  <B1569+  LYS    >                        ( 22.8 A from   CU    CU B2190  )
         E  <A 124   GLU    > matches  <B1696   GLU    >                        ( 25.5 A from    O6  NDG B2187  )
 
KERBm  3*FOUND in 4aco  size =    3  ^    CENTROMERE DNA-BINDING PROTEIN COMPLEX CBF3 SUBUNIT     #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.3422 -0.9388 -0.0399 -0.4168 -0.1897  0.8890  0.8421  0.2876  0.4562    19.571   -26.605   -54.120              
         T  <A  34   THR    > matches  <A  50   THR    > 
         K  <A  60   LYS    > matches  <A  46   LYS    > 
         E  <A 124   GLU    > matches  <A 388   GLU    > 
 
KERBm  3*FOUND in 3tw5  size =    3  ^    TRANSGLUTAMINASE ELICITOR;                              #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.1519 -0.0420  0.9875 -0.7197 -0.6801 -0.1396 -0.6775  0.7319 -0.0731    -4.695    57.895    95.347              
         T  <A  34   THR    > matches  <A 337   THR    >                        ( 28.1 A from    C7  CXS A   1  )
         K  <A  60   LYS    > matches  <A 172   LYS    >                        ( 30.0 A from    C6  CXS A 530  )
         E  <A 124   GLU    > matches  <A 444   GLU    >                        ( 27.0 A from    C1  CXS A 530  )
 
KERBm  3*FOUND in 1n11  size =    3  ^    ANKYRIN;                                                #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.7678  0.1169 -0.6299 -0.4986  0.7265 -0.4729 -0.4023 -0.6772 -0.6161   -18.754   -66.317    68.035              
         T  <A  34   THR    > matches  <A 472   THR    >                        (  8.7 A from   CL    CL A1006  )
         K  <A  60   LYS    > matches  <A 466   LYS    >                        (  9.5 A from   CL    CL A1006  )
         E  <A 124   GLU    > matches  <A 524   GLU    >                        ( 15.2 A from   CL    CL A1007  )
 
KERBm  3*FOUND in 5wx1  size =    3  ^    SERINE PROTEASE NS3;                                    #    2                            
  RMSD =     1.72 A
  TRANSFORM   -0.6180 -0.3600 -0.6989  0.7613 -0.4959 -0.4177  0.1962  0.7902 -0.5806   138.316   -26.193   -50.288              
         T  <A  34   THR    > matches  <A 414   THR    > 
         K  <A  60   LYS    > matches  <A 417   LYS    > 
         E  <A 124   GLU    > matches  <A 474   GLU    > 
 
KERBm  3*FOUND in 1nxc  size =    3  ^    MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE IA;      #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.5335 -0.2735  0.8003 -0.6240 -0.7661  0.1542 -0.5709  0.5817  0.5794    21.918    64.548   -25.632              
         T  <A  34   THR    > matches  <A 380   THR    >                        ( 25.6 A from   CA    CA A 656  )
         K  <A  60   LYS    > matches  <A 384   LYS    >                        ( 28.8 A from   CA    CA A 656  )
         E  <A 124   GLU    > matches  <A 358   GLU    >                        ( 10.2 A from   CA    CA A 656  )
 
KERBm  3*FOUND in 4pjw  size =    3  ^    COHESIN SUBUNIT SA-2;                                   #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.4217  0.5502 -0.7207 -0.7720 -0.6347 -0.0328  0.4755 -0.5426 -0.6924   -27.544   -18.815    42.612              
         T  <A  34   THR    > matches  <A 626   THR    >                        ( 61.3 A from    H22 MES A1101  )
         K  <A  60   LYS    > matches  <A 692   LYS    >                        ( 64.7 A from    H22 MES A1101  )
         E  <A 124   GLU    > matches  <A 523   GLU    >                        ( 48.3 A from    H22 MES A1101  )
 
KERBm  3*FOUND in 4rgw  size =    3  ^    TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1;        #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.2718  0.1239  0.9543 -0.5598  0.7862 -0.2615  0.7827  0.6054  0.1444    -9.328    -4.826    36.831              
         T  <A  34   THR    > matches  <B 151   THR    >                        ( 12.0 A from    O1  GOL A1302  )
         K  <A  60   LYS    > matches  <B 153   LYS    >                        ( 16.9 A from    O2  GOL A1302  )
         E  <A 124   GLU    > matches  <A 703   GLU    >                        ( 14.1 A from    OG1 TPO A1106  )
 
KERBm  3*FOUND in 5fhz  size =    3  ^    ALDEHYDE DEHYDROGENASE FAMILY 1 MEMBER A3;              #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.7023 -0.2149 -0.6787 -0.6578  0.5604  0.5032 -0.2722 -0.7999  0.5349    75.945  -102.485    49.089              
         T  <A  34   THR    > matches  <A 122   THR    >                        ( 11.7 A from    O1N NAD A 601  )
         K  <A  60   LYS    > matches  <A 124   LYS    >                        (  8.6 A from    C13 REA A 602  )
         E  <A 124   GLU    > matches  <A  65   GLU    >                        ( 11.4 A from    O2B NAD A 601  )
 
KERBm  3*FOUND in 4obs  size =    3  ^    ALPHA-L-IDURONIDASE;                                    #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.1979 -0.9339  0.2977  0.8829 -0.3018 -0.3598 -0.4259 -0.1917 -0.8842     4.587    16.998    27.070              
         T  <A  34   THR    > matches  <A 364   THR    >                        (  9.9 A from   CL    CL A 915  )
         K  <A  60   LYS    > matches  <A 384   LYS    >                        (  9.0 A from   CL    CL A 915  )
         E  <A 124   GLU    > matches  <A 178   GLU    >                        ( 17.8 A from    O4  SO4 A 916  )
 
KERBm  3*FOUND in 4b4y  size =    3  ^    NEUROGLOBIN;                                            #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.3340 -0.7357  0.5892  0.9167  0.1081 -0.3847 -0.2193 -0.6686 -0.7105     8.380   -41.716    59.616              
         T  <A  34   THR    > matches  <A 122   THR    >                        ( 15.2 A from    CMC HEM A1155  )
         K  <A  60   LYS    > matches  <A 126   LYS    >                        ( 17.5 A from    O1  OXY A1156  )
         E  <A 124   GLU    > matches  <A 111   GLU    >                        (  9.9 A from    CMC HEM A1155  )
 
KERBm  3*FOUND in 3aog  size =    3  ^    GLUTAMATE DEHYDROGENASE;                                #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.2017  0.3688  0.9074  0.9651 -0.2330 -0.1198 -0.1672 -0.8998  0.4029    10.446    22.270    29.627              
         T  <A  34   THR    > matches  <A  20   THR    >                        ( 17.5 A from    OE2 GLU A 425  )
         K  <A  60   LYS    > matches  <A  41   LYS    >                        ( 17.6 A from    OE2 GLU A 425  )
         E  <A 124   GLU    > matches  <A 322   GLU    >                        ( 16.3 A from    O   GLU A 500  )
 
KERBm  3*FOUND in 1d7m  size =    3  ^    CORTEXILLIN I;                                          #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.3698  0.9275 -0.0547 -0.6625 -0.2220  0.7154 -0.6514 -0.3008 -0.6966   -42.175   -36.261   108.330              
         T  <A  34   THR    > matches  <A 300   THR    > 
         K  <A  60   LYS    > matches  <A 296   LYS    > 
         E  <A 124   GLU    > matches  <A 315   GLU    > 
 
KERBm  3*FOUND in 2r75  size =    3  ^    CELL DIVISION PROTEIN FTSZ;                             #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.0651  0.9218  0.3823 -0.1435 -0.3704  0.9177 -0.9875  0.1146 -0.1082    26.829    -8.923    29.189              
         T  <A  34   THR    > matches  <1 116   THR    >                        ( 17.8 A from    O1B 01G 1 614  )
         K  <A  60   LYS    > matches  <1  86   LYS    >                        ( 22.8 A from    O1B 01G 1 614  )
         E  <A 124   GLU    > matches  <1 315   GLU    >                        ( 22.3 A from    C4' 01G 1 614  )
 
KERBm  3*FOUND in 2hfs  size =    3  ^    MEVALONATE KINASE, PUTATIVE;                            #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.4208  0.5747 -0.7018 -0.2357 -0.6778 -0.6964  0.8760 -0.4585  0.1498     8.165    24.742   -13.943              
         T  <A  34   THR    > matches  <A 269   THR    > 
         K  <A  60   LYS    > matches  <A 309   LYS    > 
         E  <A 124   GLU    > matches  <A  24   GLU    > 
 
KERBm  3*FOUND in 4n0r  size =    3  ^    PUTATIVE GLYCOSIDE HYDROLASE;                           #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.9340  0.3344  0.1259  0.1906  0.7644 -0.6159  0.3022  0.5513  0.7777    49.944    11.944   -33.465              
         T  <A  34   THR    > matches  <A 323   THR    >                        ( 17.0 A from   NI    NI A 604  )
         K  <A  60   LYS    > matches  <A 348   LYS    >                        ( 14.4 A from   NI    NI A 604  )
         E  <A 124   GLU    > matches  <A  58   GLU    >                        ( 17.4 A from    O3  GOL A 609  )
 
KERBm  3*FOUND in 5fky  size =    3  ^    O-GLCNACASE BT_4395;                                    #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.5483  0.7446 -0.3808  0.6455  0.0873 -0.7588  0.5317  0.6618  0.5285    44.515     0.549    10.901              
         T  <A  34   THR    > matches  <A 295   THR    >                        ( 19.4 A from    N1  2J4 A1717  )
         K  <A  60   LYS    > matches  <A 331   LYS    >                        ( 20.6 A from    N1  2J4 A1717  )
         E  <A 124   GLU    > matches  <A 247   GLU    >                        ( 21.3 A from    N1  2J4 A1717  )
 
KERBm  3*FOUND in 2dq0  size =    3  ^    SERYL-TRNA SYNTHETASE;                                  #    2                            
  RMSD =     1.72 A
  TRANSFORM    0.5118  0.5870  0.6273  0.1182  0.6751 -0.7282  0.8509 -0.4468 -0.2762   -13.670     0.679    -0.873              
         T  <A  34   THR    > matches  <A 288   THR    >                        (  6.4 A from    O4  SO4 A2001  )
         K  <A  60   LYS    > matches  <A 291   LYS    >                        ( -4.8 A from    O3  SO4 A2003s )
         E  <A 124   GLU    > matches  <A 254   GLU    >                        ( -3.4 A from    N10 SSA A1001s )
 
KERBm  3*FOUND in 5swu  size =    3  ^    PENTAFUNCTIONAL AROM POLYPEPTIDE;                       #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.1288 -0.9206  0.3688  0.9809 -0.1730 -0.0890 -0.1457 -0.3502 -0.9253    53.467    30.034    17.933              
         T  <A  34   THR    > matches  <A1276   THR    > 
         K  <A  60   LYS    > matches  <A1280   LYS    > 
         E  <A 124   GLU    > matches  <A1070   GLU    > 
 
KERBm  3*FOUND in 3nkd  size =    3  ^    CRISPR-ASSOCIATED PROTEIN CAS1;                         #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.2268  0.6891 -0.6883 -0.8854  0.1484  0.4404 -0.4057 -0.7093 -0.5764    32.314     4.963    65.033              
         T  <A  34   THR    > matches  <A 260   THR    > 
         K  <A  60   LYS    > matches  <A 263   LYS    > 
         E  <A 124   GLU    > matches  <A 246   GLU    > 
 
KERBm  3*FOUND in 4n9o  size =    3  ^    MAJOR PRION PROTEIN;                                    #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.6368  0.0876 -0.7661  0.3536 -0.8497 -0.3910  0.6852  0.5199 -0.5101    40.748   -19.096    19.553              
         T  <A  34   THR    > matches  <A 191   THR    > 
         K  <A  60   LYS    > matches  <A 194   LYS    > 
         E  <A 124   GLU    > matches  <A 211   GLU    > 
 
KERBm  3*FOUND in 2qiz  size =    3  ^    UBIQUITIN CONJUGATION FACTOR E4;                        #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.2292  0.2645 -0.9368  0.7910 -0.6114  0.0209  0.5672  0.7458  0.3494    26.879   -21.803   -38.620              
         T  <A  34   THR    > matches  <A 448   THR    >                        ( 14.9 A from    K     K A 962  )
         K  <A  60   LYS    > matches  <A 444   LYS    >                        ( 17.0 A from    K     K A 962  )
         E  <A 124   GLU    > matches  <A 256   GLU    >                        ( 13.1 A from    K     K A 962  )
 
KERBm  3*FOUND in 3tkj  size =    3  ^    L-ASPARAGINASE;                                         #    1                            
  RMSD =     1.72 A
  TRANSFORM   -0.9686  0.1113  0.2222  0.1013  0.9933 -0.0556  0.2269  0.0313  0.9734    38.383   -31.092   -37.212              
         T  <A  34   THR    > matches  <A  71   THR    >                        ( 14.6 A from    O4  SO4 A 403  )
         K  <A  60   LYS    > matches  <A 152   LYS    >                        ( 16.7 A from    O4  SO4 A 403  )
         E  <A 124   GLU    > matches  <A 133   GLU    >                        ( 18.9 A from   NA    NA A 401  )
 
KERBm  3*FOUND in 2c5a  size =    3  ^    GDP-MANNOSE-3', 5'-EPIMERASE;                           #    1                            
  RMSD =     1.72 A
  TRANSFORM    0.6120  0.6347 -0.4719 -0.1125  0.6604  0.7424 -0.7828  0.4013 -0.4756    -3.241   -23.059    14.651              
         T  <A  34   THR    > matches  <A  13   THR    >                        (  5.3 A from    O1  FMT A1382  )
         K  <A  60   LYS    > matches  <A  15   LYS    >                        ( -7.3 A from    O1  FMT A1379s )
         E  <A 124   GLU    > matches  <A  63   GLU    >                        ( -5.2 A from    O1  FMT A1383s )
 
KERBm  3*FOUND in 6f87  size =    3  ^    THREONYLCARBAMOYL-AMP SYNTHASE;                         #    2                            
  RMSD =     1.73 A
  TRANSFORM   -0.8388 -0.4940 -0.2289 -0.0243  0.4539 -0.8907 -0.5439  0.7415  0.3928     2.426    41.045    10.142              
         T  <A  34   THR    > matches  <A 224   THR    >                        ( 13.5 A from    O3  POP A 401  )
         K  <A  60   LYS    > matches  <A 231   LYS    >                        ( 11.2 A from    O3  POP A 401  )
         E  <A 124   GLU    > matches  <A 105   GLU    >                        ( 25.6 A from    N   THR A 402  )
 
KERBm  3*FOUND in 5njl  size =    3  ^    CELL SURFACE PROTEIN (PUTATIVE S-LAYER PROTEIN);        #    2                            
  RMSD =     1.73 A
  TRANSFORM   -0.5843 -0.3916 -0.7108  0.2982 -0.9182  0.2607  0.7547  0.0596 -0.6533    65.863   -18.528   -53.220              
         T  <A  34   THR    > matches  <A 102   THR    >                        (  9.6 A from    O3  SO4 A 410  )
         K  <A  60   LYS    > matches  <A  69   LYS    >                        (  4.9 A from    O3  SO4 A 410  )
         E  <A 124   GLU    > matches  <A 280   GLU    >                        ( 17.0 A from    O4  SO4 A 411  )
 
KERBm  3*FOUND in 3u7z  size =    3  ^    PUTATIVE METAL BINDING PROTEIN RUMGNA_00854;            #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.0587 -0.9224  0.3817 -0.9899  0.0044 -0.1414 -0.1287  0.3862  0.9134    50.606    22.380    17.590              
         T  <A  34   THR    > matches  <A 126   THR    >                        ( 11.2 A from    C1  EDO A 145  )
         K  <A  60   LYS    > matches  <A 128   LYS    >                        ( 10.0 A from    C1  EDO A 145  )
         E  <A 124   GLU    > matches  <A  54   GLU    >                        (  2.8 A from   CA    CA A 136s )
 
KERBm  3*FOUND in 5gzt  size =    3  ^    CHITINASE;                                              #    3                            
  RMSD =     1.73 A
  TRANSFORM   -0.4696  0.4095  0.7821 -0.5064  0.6007 -0.6186  0.7232  0.6866  0.0747    25.079   -41.082    -9.085              
         T  <A  34   THR    > matches  <B1285   THR    >                        (  8.8 A from    O1  FMT B4010  )
         K  <A  60   LYS    > matches  <B1289   LYS    >                        ( -5.4 A from    O1  FMT B4010s )
         E  <A 124   GLU    > matches  <B1259   GLU    >                        ( 26.8 A from    O1  FMT B4007  )
 
KERBm  3*FOUND in 4mr0  size =    3  ^    PLASMIN AND FIBRONECTIN-BINDING PROTEIN A;              #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.8777  0.2169  0.4272 -0.0949  0.9527 -0.2888  0.4696 -0.2129 -0.8568     1.792   -11.447   -15.163              
         T  <A  34   THR    > matches  <A 481   THR    >                        ( 19.0 A from   MN    MN A 706  )
         K  <A  60   LYS    > matches  <A 432   LYS    >                        ( 13.9 A from   MN    MN A 706  )
         E  <A 124   GLU    > matches  <A 545   GLU    >                        ( 28.0 A from   CA    CA A 702  )
 
KERBm  3*FOUND in 1bjt  size =    3  ^    TOPOISOMERASE II;                                       #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.1366 -0.9698  0.2021  0.7957  0.2289  0.5607  0.5901 -0.0842 -0.8030    99.034   -23.673    46.594              
         T  <A  34   THR    > matches  <A1157   THR    > 
         K  <A  60   LYS    > matches  <A1160   LYS    > 
         E  <A 124   GLU    > matches  <A1138   GLU    > 
 
KERBm  3*FOUND in 5cec  size =    3  ^    BD3459;                                                 #    2                            
  RMSD =     1.73 A
  TRANSFORM   -0.4970  0.6023 -0.6247 -0.5963  0.2859  0.7501 -0.6304 -0.7453 -0.2171    -2.514     2.318   -11.932              
         T  <A  34   THR    > matches  <A 386   THR    >                        ( 10.5 A from    O2  SO4 A 501  )
         K  <A  60   LYS    > matches  <A  38+  LYS    >                        ( 16.5 A from    O2  SO4 A 501  )
         E  <A 124   GLU    > matches  <A 294   GLU    >                        ( 15.1 A from    O3  SO4 A 501  )
 
KERBm  3*FOUND in 3k6j  size =    3  ^    PROTEIN F01G10.3, CONFIRMED BY TRANSCRIPT EVIDENCE;     #    2                            
  RMSD =     1.73 A
  TRANSFORM    0.9677 -0.1001  0.2313  0.0912  0.9946  0.0490  0.2350  0.0263 -0.9716    19.534    27.628     1.759              
         T  <A  34   THR    > matches  <A 300   THR    >                        ( 17.2 A from    O1  PO4 A 502  )
         K  <A  60   LYS    > matches  <A 302   LYS    >                        ( 23.7 A from    O1  PO4 A 502  )
         E  <A 124   GLU    > matches  <A 278   GLU    >                        ( 16.5 A from    O2  PO4 A 503  )
 
KERBm  3*FOUND in 1iwe  size =    3  ^    ADENYLOSUCCINATE SYNTHETASE;                            #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.1806  0.5038 -0.8447 -0.9365  0.1743  0.3042 -0.3006 -0.8460 -0.4404    67.026    29.014    56.007              
         T  <A  34   THR    > matches  <A 163   THR    >                        ( -3.0 A from    O1P IMP A 460s )
         K  <A  60   LYS    > matches  <A 165   LYS    >                        (  8.2 A from    O   ACT A 459  )
         E  <A 124   GLU    > matches  <A 313   GLU    >                        ( 12.1 A from    O3' IMP A 460  )
 
KERBm  3*FOUND in 1qks  size =    3  ^    CYTOCHROME CD1 NITRITE REDUCTASE;                       #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.1526  0.1930 -0.9693  0.7100  0.7037  0.0284 -0.6875  0.6838  0.2444    85.102   -35.262    20.786              
         T  <A  34   THR    > matches  <A  82   THR    >                        ( 10.1 A from    O2A HEC A 601  )
         K  <A  60   LYS    > matches  <A  74   LYS    >                        ( 13.2 A from    O2A HEC A 601  )
         E  <A 124   GLU    > matches  <A  44   GLU    >                        ( 21.8 A from    CMA HEC A 601  )
 
KERBm  3*FOUND in 2a6h  size =    3  ^    DNA-DIRECTED RNA POLYMERASE ALPHA CHAIN;                #    2                            
  RMSD =     1.73 A
  TRANSFORM    0.7531  0.1255 -0.6459  0.2079  0.8860  0.4145 -0.6242  0.4464 -0.6411    23.200  -121.602   -46.410              
         T  <A  34   THR    > matches  <C 954   THR    >                        ( 42.3 A from   MG    MG D9001  )
         K  <A  60   LYS    > matches  <C 957   LYS    >                        ( 45.9 A from   MG    MG D9001  )
         E  <A 124   GLU    > matches  <D 959   GLU    >                        ( 38.0 A from   MG    MG D9001  )
 
KERBm  3*FOUND in 3sxx  size =    3  ^    PEROXISOMAL PRIMARY AMINE OXIDASE;                      #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.4256 -0.7749 -0.4673 -0.3620  0.6191 -0.6969 -0.8294  0.1275  0.5440    69.039    28.514   -32.473              
         T  <A  34   THR    > matches  <A 255   THR    >                        (  8.4 A from    C3  GOL A 807  )
         K  <A  60   LYS    > matches  <A 253   LYS    >                        ( 11.1 A from    C3  GOL A 807  )
         E  <A 124   GLU    > matches  <A  32   GLU    >                        ( 15.9 A from    O1  GOL A 807  )
 
KERBm  3*FOUND in 2iu4  size =    3  ^    DIHYDROXYACETONE KINASE;                                #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.3776 -0.3168  0.8701 -0.8286  0.3038  0.4702  0.4133  0.8985  0.1477    26.486   -66.144    19.658              
         T  <A  34   THR    > matches  <A 151   THR    >                        (  9.0 A from    O3  HIQ A 215  )
         K  <A  60   LYS    > matches  <A 102   LYS    >                        (  3.5 A from    O3  HIQ A 215  )
         E  <A 124   GLU    > matches  <A 164   GLU    >                        ( 10.0 A from    O1  SO4 A1373  )
 
KERBm  3*FOUND in 1rni  size =    3  ^    ORF904;                                                 #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.6739  0.7262  0.1362 -0.1912  0.0067 -0.9815  0.7137  0.6875 -0.1343   105.142    17.359    84.797              
         T  <A  34   THR    > matches  <A 193   THR    >                        (  7.6 A from   ZN    ZN A 256  )
         K  <A  60   LYS    > matches  <A 199   LYS    >                        ( 10.6 A from   ZN    ZN A 256  )
         E  <A 124   GLU    > matches  <A 163   GLU    >                        ( 24.4 A from   ZN    ZN A 256  )
 
KERBm  3*FOUND in 3g2f  size =    3  ^    BONE MORPHOGENETIC PROTEIN RECEPTOR TYPE-2;             #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.0400 -0.5410  0.8401  0.5847  0.6944  0.4194  0.8102 -0.4745 -0.3441    21.303   -99.160    -3.324              
         T  <A  34   THR    > matches  <A 309   THR    >                        (  6.9 A from    C   CAS A 496  )
         K  <A  60   LYS    > matches  <A 497+  LYS    >                        (  3.0 A from    O   CAS A 496  )
         E  <A 124   GLU    > matches  <A 243   GLU    >                        (  4.7 A from    O1A ADP A 900  )
 
KERBm  3*FOUND in 2r0x  size =    3  ^    POSSIBLE FLAVIN REDUCTASE;                              #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.4501  0.5055  0.7361 -0.8870  0.1579  0.4339 -0.1031  0.8483 -0.5195    13.460   -33.743     9.138              
         T  <A  34   THR    > matches  <A  73   THR    >                        ( 13.1 A from    O1 BSO4 A 163  )
         K  <A  60   LYS    > matches  <A 144   LYS    >                        ( 17.6 A from    O1 BSO4 A 163  )
         E  <A 124   GLU    > matches  <A  91   GLU    >                        ( 13.3 A from    O4  SO4 A 165  )
 
KERBm  3*FOUND in 5z67  size =    3  ^    DNA REPLICATION AND REPAIR PROTEIN RECF;                #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.0934  0.9114 -0.4007 -0.1236 -0.3887 -0.9130  0.9879 -0.1348 -0.0763    -0.477    13.754    21.007              
         T  <A  34   THR    > matches  <A 106   THR    > 
         K  <A  60   LYS    > matches  <A  94   LYS    > 
         E  <A 124   GLU    > matches  <A 308   GLU    > 
 
KERBm  3*FOUND in 4ewg  size =    3  ^    BETA-KETOACYL SYNTHASE;                                 #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.2561 -0.9126 -0.3186 -0.5268  0.4081 -0.7456 -0.8105  0.0231  0.5853    58.136    36.692    -8.647              
         T  <A  34   THR    > matches  <A 336   THR    >                        ( 18.6 A from    N3  IMD A 501  )
         K  <A  60   LYS    > matches  <A 330   LYS    >                        ( 17.8 A from    N3  IMD A 501  )
         E  <A 124   GLU    > matches  <A  82   GLU    >                        ( 36.9 A from    N3  IMD A 501  )
 
KERBm  3*FOUND in 3rqt  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.5595 -0.2047  0.8032 -0.7922  0.4173 -0.4454  0.2439  0.8854  0.3956    39.942    25.587   -49.097              
         T  <A  34   THR    > matches  <A 467   THR    >                        ( 17.5 A from    O3  SO4 A 477  )
         K  <A  60   LYS    > matches  <A   6   LYS    >                        ( 20.3 A from    O1  SO4 A 477  )
         E  <A 124   GLU    > matches  <A 457   GLU    >                        ( 10.6 A from    OXT HIS A 471  )
 
KERBm  3*FOUND in 1w9i  size =    3  ^    MYOSIN II HEAVY CHAIN;                                  #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.2700  0.9545  0.1268 -0.4056  0.2322 -0.8840  0.8732 -0.1873 -0.4499   -56.146    -9.469    -5.713              
         T  <A  34   THR    > matches  <A 629   THR    >                        ( 11.3 A from    C1  EDO A1759  )
         K  <A  60   LYS    > matches  <A 623   LYS    >                        ( 12.1 A from    O2  EDO A1768  )
         E  <A 124   GLU    > matches  <A 580   GLU    >                        (  6.0 A from    O1  EDO A1765  )
 
KERBm  3*FOUND in 1uj2  size =    3  ^    URIDINE-CYTIDINE KINASE 2;                              #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.8523 -0.2314  0.4691 -0.1288  0.7763  0.6171  0.5070  0.5863 -0.6318    -2.739   -53.426    51.309              
         T  <A  34   THR    > matches  <A  29   THR    >                        ( -3.5 A from    O2P C5P A2301s )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        (  2.6 A from    O1B ADP A2302s )
         E  <A 124   GLU    > matches  <A 179   GLU    >                        ( 17.2 A from    O2  C5P A2301  )
 
KERBm  3*FOUND in 3nhe  size =    3  ^    UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2;                #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.6135  0.7481  0.2529  0.5190  0.1406  0.8431 -0.5952 -0.6485  0.4745    34.712   -42.068    11.867              
         T  <A  34   THR    > matches  <A 463   THR    >                        ( 23.7 A from   ZN    ZN A   1  )
         K  <A  60   LYS    > matches  <A 488   LYS    >                        ( 20.3 A from   ZN    ZN A   1  )
         E  <A 124   GLU    > matches  <A 452   GLU    >                        ( 26.7 A from    O   CME A 276  )
 
KERBm  3*FOUND in 3mx7  size =    3  ^    FAS APOPTOTIC INHIBITORY MOLECULE 1;                    #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.1483 -0.1963 -0.9693  0.3759 -0.8953  0.2389  0.9147  0.3998  0.0590    24.097    -3.917   -27.313              
         T  <A  34   THR    > matches  <A  53   THR    > 
         K  <A  60   LYS    > matches  <A  62   LYS    > 
         E  <A 124   GLU    > matches  <A  43   GLU    > 
 
KERBm  3*FOUND in 4ido  size =    3  ^    ATLASTIN-1;                                             #    2                            
  RMSD =     1.73 A
  TRANSFORM   -0.5652 -0.8089 -0.1616 -0.6720  0.5651 -0.4786 -0.4785  0.1619  0.8631    -6.826    16.429   -70.354              
         T  <A  34   THR    > matches  <A 366   THR    >                        ( 49.1 A from    F2  ALF A 502  )
         K  <A  60   LYS    > matches  <A 370   LYS    >                        ( 53.8 A from    F2  ALF A 502  )
         E  <A 124   GLU    > matches  <A 411   GLU    >                        ( 39.8 A from    F4  ALF A 502  )
 
KERBm  3*FOUND in 3dxq  size =    3  ^    CHOLINE/ETHANOLAMINE KINASE FAMILY PROTEIN;             #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.6522 -0.5867 -0.4800  0.5516 -0.8017  0.2303  0.5199  0.1146 -0.8465   124.183    54.616    22.968              
         T  <A  34   THR    > matches  <A  93   THR    > 
         K  <A  60   LYS    > matches  <A  98   LYS    > 
         E  <A 124   GLU    > matches  <A  72   GLU    > 
 
KERBm  3*FOUND in 3cmg  size =    3  ^    PUTATIVE BETA-GALACTOSIDASE;                            #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.5636 -0.6874  0.4581 -0.5317  0.7263  0.4357  0.6322 -0.0020  0.7748    40.375   -17.512   -20.328              
         T  <A  34   THR    > matches  <A 492   THR    >                        ( 21.8 A from    O4  PO4 A 810  )
         K  <A  60   LYS    > matches  <A 488   LYS    >                        ( 23.0 A from    O4  PO4 A 810  )
         E  <A 124   GLU    > matches  <A 503   GLU    >                        ( 23.3 A from   CL    CL A 820  )
 
KERBm  3*FOUND in 1jqn  size =    3  ^    PHOSPHOENOLPYRUVATE CARBOXYLASE;                        #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.2217  0.6650 -0.7132 -0.7007 -0.6173 -0.3578  0.6782 -0.4204 -0.6028   -15.520    28.987    11.011              
         T  <A  34   THR    > matches  <A 882   THR    >                        (  7.9 A from    OD2 ASP A 884  )
         K  <A  60   LYS    > matches  <A 773   LYS    >                        ( -2.6 A from    OD2 ASP A 884s )
         E  <A 124   GLU    > matches  <A 506   GLU    >                        (  2.8 A from   MN    MN A 902s )
 
KERBm  3*FOUND in 5gzu  size =    3  ^    CHITINASE;                                              #    4                            
  RMSD =     1.73 A
  TRANSFORM    0.4486 -0.8645  0.2267  0.4716  0.0135 -0.8817 -0.7592 -0.5024 -0.4137   -12.092    44.787    37.143              
         T  <A  34   THR    > matches  <A1285   THR    >                        ( 36.3 A from    O1  PO4 A3001  )
         K  <A  60   LYS    > matches  <A1289   LYS    >                        ( 38.7 A from    O1  PO4 A3001  )
         E  <A 124   GLU    > matches  <A1259   GLU    >                        ( 40.3 A from    O1  PO4 A3001  )
 
KERBm  3*FOUND in 1ear  size =    3  ^    UREASE ACCESSORY PROTEIN UREE;                          #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.5332  0.6433  0.5494 -0.2536  0.4980 -0.8292  0.8070  0.5815  0.1024   -15.044    41.014     5.317              
         T  <A  34   THR    > matches  <A 117   THR    >                        ( 16.3 A from   ZN  A ZN A1143  )
         K  <A  60   LYS    > matches  <A 120   LYS    >                        ( 14.1 A from   ZN  A ZN A1143  )
         E  <A 124   GLU    > matches  <A  26   GLU    >                        ( 24.5 A from   ZN  A ZN A1143  )
 
KERBm  3*FOUND in 4xur  size =    3  ^    ENDO-1,4-BETA-XYLANASE C;                               #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.2075  0.1194  0.9709  0.9464 -0.2755 -0.1684 -0.2474 -0.9539  0.1701    17.623   -50.382    30.300              
         T  <A  34   THR    > matches  <A 275   THR    >                        ( 16.5 A from    O3B XYP A1003  )
         K  <A  60   LYS    > matches  <A 282   LYS    >                        ( 19.3 A from    O3B XYP A1003  )
         E  <A 124   GLU    > matches  <A 313   GLU    >                        ( 14.1 A from    C5B XYP A1004  )
 
KERBm  3*FOUND in 4s17  size =    3  ^    GLUTAMINE SYNTHETASE;                                   #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.7734 -0.5931 -0.2239  0.0555  0.4151 -0.9081 -0.6315 -0.6898 -0.3540   -35.009    79.184    60.061              
         T  <A  34   THR    > matches  <A 128   THR    >                        ( 25.3 A from   MG    MG A 501  )
         K  <A  60   LYS    > matches  <A 121   LYS    >                        ( 30.4 A from   MG    MG A 501  )
         E  <A 124   GLU    > matches  <A 134   GLU    >                        (  5.7 A from   MG    MG A 501  )
 
KERBm  3*FOUND in 4ewg  size =    3  ^    BETA-KETOACYL SYNTHASE;                                 #    2                            
  RMSD =     1.73 A
  TRANSFORM   -0.5902 -0.7828 -0.1970  0.1872  0.1047 -0.9767 -0.7852  0.6134 -0.0847    52.019    48.068    30.195              
         T  <A  34   THR    > matches  <A 336   THR    >                        ( 18.6 A from    N3  IMD A 501  )
         K  <A  60   LYS    > matches  <A 330   LYS    >                        ( 17.8 A from    N3  IMD A 501  )
         E  <A 124   GLU    > matches  <A 113   GLU    >                        ( 25.3 A from    N3  IMD A 501  )
 
KERBm  3*FOUND in 2a6h  size =    3  ^    DNA-DIRECTED RNA POLYMERASE ALPHA CHAIN;                #    4                            
  RMSD =     1.73 A
  TRANSFORM    0.7204 -0.0799 -0.6889 -0.5554  0.5284 -0.6421 -0.4153 -0.8452 -0.3363    72.705   -90.244   142.783              
         T  <A  34   THR    > matches  <D 999   THR    >                        ( 30.9 A from    C25 STD D8001  )
         K  <A  60   LYS    > matches  <D1002   LYS    >                        ( 34.0 A from    C27 STD D8001  )
         E  <A 124   GLU    > matches  <C 520   GLU    >                        ( 22.4 A from    C15 STD D8001  )
 
KERBm  3*FOUND in 5to5  size =    3  ^    NUCLEOPROTEIN TPR;                                      #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.2253  0.2345 -0.9456  0.9163 -0.2787 -0.2874  0.3310  0.9313  0.1521    42.550    18.080    26.578              
         T  <A  34   THR    > matches  <A  93   THR    > 
         K  <A  60   LYS    > matches  <A  97   LYS    > 
         E  <A 124   GLU    > matches  <A  81   GLU    > 
 
KERBm  3*FOUND in 3tu8  size =    3  ^    BURKHOLDERIA LETHAL FACTOR 1 (BLF1);                    #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.9401 -0.1226 -0.3181 -0.1226  0.7492 -0.6510 -0.3181 -0.6510 -0.6892     6.744    13.800    35.812              
         T  <A  34   THR    > matches  <A  34   THR    >                        ( 21.3 A from    OD  CSO A  94  )
         K  <A  60   LYS    > matches  <A  60   LYS    >                        ( 24.5 A from    OD  CSO A  94  )
         E  <A 124   GLU    > matches  <A 124   GLU    >                        ( 25.6 A from    C   CSO A  94  )
 
KERBm  3*FOUND in 6cmj  size =    3  ^    CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE      #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.9108  0.4120  0.0257 -0.3659  0.7771  0.5121 -0.1910  0.4758 -0.8586   -30.670   -25.493    17.384              
         T  <A  34   THR    > matches  <A 166   THR    >                        ( 17.0 A from    N2  F6J A 501  )
         K  <A  60   LYS    > matches  <A 161+  LYS    >                        ( 18.1 A from    O2  FMT A 503  )
         E  <A 124   GLU    > matches  <A 322   GLU    >                        ( -5.9 A from    O2  EDO A 505s )
 
KERBm  3*FOUND in 1mty  size =    3  ^    METHANE MONOOXYGENASE HYDROXYLASE;                      #    5                            
  RMSD =     1.73 A
  TRANSFORM    0.9582 -0.2842  0.0324  0.2035  0.7568  0.6212  0.2011  0.5887 -0.7829   -10.432   -49.040    36.426              
         T  <A  34   THR    > matches  <B 219   THR    >                        ( 34.8 A from   FE    FE D   3  )
         K  <A  60   LYS    > matches  <B 225   LYS    >                        ( 38.6 A from   FE    FE D   3  )
         E  <A 124   GLU    > matches  <D 132   GLU    >                        ( 20.6 A from   FE    FE D   3  )
 
KERBm  3*FOUND in 2jdi  size =    3  ^    ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM;               #    2                            
  RMSD =     1.73 A
  TRANSFORM    0.2054 -0.8915  0.4038  0.7177 -0.1433 -0.6815 -0.6654 -0.4297 -0.6104    56.397     7.089    95.438              
         T  <A  34   THR    > matches  <G 137   THR    >                        ( 50.9 A from    N1  ANP A1511  )
         K  <A  60   LYS    > matches  <G 218   LYS    >                        ( 51.8 A from    N1  ANP A1511  )
         E  <A 124   GLU    > matches  <H 130   GLU    >                        ( 58.5 A from    C2  ANP A1511  )
 
KERBm  3*FOUND in 3n98  size =    3  ^    ALPHA-AMYLASE, GH57 FAMILY;                             #    2                            
  RMSD =     1.73 A
  TRANSFORM   -0.0920 -0.9932 -0.0719  0.6331 -0.0026 -0.7741 -0.7686  0.1167 -0.6290    24.829    -7.599   -16.628              
         T  <A  34   THR    > matches  <A  69   THR    >                        ( 11.7 A from    C2  DIO A 569  )
         K  <A  60   LYS    > matches  <A  74   LYS    >                        ( 12.9 A from    O1  DIO A 569  )
         E  <A 124   GLU    > matches  <A 454   GLU    >                        ( 24.2 A from    C1  PEG A 571  )
 
KERBm  3*FOUND in 2w2r  size =    3  ^    MATRIX PROTEIN;                                         #    1                            
  RMSD =     1.73 A
  TRANSFORM    0.8113  0.5748  0.1062 -0.3924  0.6702 -0.6299  0.4333 -0.4694 -0.7694    48.175    -3.845    27.052              
         T  <A  34   THR    > matches  <A 219   THR    > 
         K  <A  60   LYS    > matches  <A 214   LYS    > 
         E  <A 124   GLU    > matches  <A 184   GLU    > 
 
KERBm  3*FOUND in 5l16  size =    3  ^    PUTATIVE SELENOPHOSPHATE SYNTHETASE;                    #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.9544  0.0900  0.2847  0.2456  0.7790  0.5769  0.1699 -0.6205  0.7656     7.821    -1.577    55.103              
         T  <A  34   THR    > matches  <A  27   THR    >                        ( 24.6 A from    O3  SO4 A 401  )
         K  <A  60   LYS    > matches  <A   6+  LYS    >                        ( 25.4 A from    O3  SO4 A 401  )
         E  <A 124   GLU    > matches  <A  92   GLU    >                        ( 35.5 A from    O3  SO4 A 401  )
 
KERBm  3*FOUND in 2oa5  size =    3  ^    HYPOTHETICAL PROTEIN BQLF2;                             #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.1061  0.4864 -0.8673  0.9537  0.2967  0.0497 -0.2815  0.8218  0.4953    30.625    21.516     8.134              
         T  <A  34   THR    > matches  <A  26   THR    >                        ( 14.1 A from    C48 PE5 A4870  )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        ( 20.0 A from    C48 PE5 A4870  )
         E  <A 124   GLU    > matches  <A 101   GLU    >                        ( 11.5 A from    C48 PE5 A4870  )
 
KERBm  3*FOUND in 3qo6  size =    3  ^    PROTEASE DO-LIKE 1, CHLOROPLASTIC;                      #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.9407 -0.2197  0.2586  0.0882  0.5777  0.8115  0.3276 -0.7862  0.5240    83.599     2.987   -17.396              
         T  <A  34   THR    > matches  <A 333   THR    > 
         K  <A  60   LYS    > matches  <A 331   LYS    > 
         E  <A 124   GLU    > matches  <A 414   GLU    > 
 
KERBm  3*FOUND in 1h0h  size =    3  ^    FORMATE DEHYDROGENASE SUBUNIT ALPHA;                    #    2                            
  RMSD =     1.73 A
  TRANSFORM    0.9387 -0.3432  0.0333 -0.3317 -0.8724  0.3589  0.0941  0.3480  0.9328     2.023   -34.287   -70.445              
         T  <A  34   THR    > matches  <A 109   THR    >                        ( 31.9 A from    N2  2MD A1001  )
         K  <A  60   LYS    > matches  <A 626   LYS    >                        ( 29.8 A from    N2  2MD A1001  )
         E  <A 124   GLU    > matches  <A 441   GLU    >                        ( 35.6 A from    UNK UNX A1003  )
 
KERBm  3*FOUND in 1pj5  size =    3  ^    N,N-DIMETHYLGLYCINE OXIDASE;                            #    2                            
  RMSD =     1.73 A
  TRANSFORM    0.7991 -0.5584 -0.2227 -0.2566  0.0182 -0.9663 -0.5437 -0.8293  0.1287    31.291    35.788   103.023              
         T  <A  34   THR    > matches  <A 527   THR    >                        ( 36.0 A from    O2P FAD A 902  )
         K  <A  60   LYS    > matches  <A 725   LYS    >                        ( 39.1 A from    O2P FAD A 902  )
         E  <A 124   GLU    > matches  <A 709   GLU    >                        ( 21.0 A from    O2  FAD A 902  )
 
KERBm  3*FOUND in 3qex  size =    3  ^    DNA POLYMERASE;                                         #    1                            
  RMSD =     1.73 A
  TRANSFORM   -0.5194  0.0513  0.8530  0.4300 -0.8469  0.3128 -0.7385 -0.5292 -0.4179    45.918   -17.007    22.896              
         T  <A  34   THR    > matches  <A 264   THR    >                        ( 24.5 A from   CA    CA A 909  )
         K  <A  60   LYS    > matches  <A 251   LYS    >                        ( 21.7 A from    O6  DGT A 904  )
         E  <A 124   GLU    > matches  <A  26   GLU    >                        ( 28.1 A from   CA    CA A 909  )
 
KERBm  3*FOUND in 2pjz  size =    3  ^    HYPOTHETICAL PROTEIN ST1066;                            #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.1832 -0.9284 -0.3233  0.5969 -0.1562  0.7870  0.7811  0.3372 -0.5255   100.415    -0.378     5.446              
         T  <A  34   THR    > matches  <A 182   THR    >                        (  9.5 A from    O3  SO4 A 502  )
         K  <A  60   LYS    > matches  <A  43   LYS    >                        ( -2.6 A from    O3  SO4 A 502s )
         E  <A 124   GLU    > matches  <A 215   GLU    >                        ( 25.7 A from    O3  SO4 A 502  )
 
KERBm  3*FOUND in 2o6k  size =    3  ^    UPF0346 PROTEIN MW1311;                                 #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.8699 -0.4734  0.1380 -0.4759 -0.7325  0.4868  0.1294  0.4892  0.8625    25.910    41.651   -13.422              
         T  <A  34   THR    > matches  <A  68   THR    > 
         K  <A  60   LYS    > matches  <A  72   LYS    > 
         E  <A 124   GLU    > matches  <A  48   GLU    > 
 
KERBm  3*FOUND in 2qj8  size =    3  ^    MLR6093 PROTEIN;                                        #    2                            
  RMSD =     1.74 A
  TRANSFORM    0.4184 -0.5923 -0.6885 -0.2412 -0.8033  0.5445  0.8757  0.0618  0.4790    40.423    56.443   -51.198              
         T  <A  34   THR    > matches  <A 250   THR    > 
         K  <A  60   LYS    > matches  <A 171   LYS    > 
         E  <A 124   GLU    > matches  <A 321   GLU    > 
 
KERBm  3*FOUND in 2y8n  size =    3  ^    4-HYDROXYPHENYLACETATE DECARBOXYLASE LARGE SUBUNIT;     #    5                            
  RMSD =     1.74 A
  TRANSFORM   -0.2029  0.7718 -0.6026 -0.1565  0.5819  0.7980 -0.9666 -0.2562 -0.0027    -4.213   -78.625    96.972              
         T  <A  34   THR    > matches  <B  74   THR    >                        ( 10.9 A from   FE3  SF4 B  88  )
         K  <A  60   LYS    > matches  <B  44   LYS    >                        ( 10.7 A from    S3  SF4 B  87  )
         E  <A 124   GLU    > matches  <A 128   GLU    >                        ( 27.6 A from    S2  SF4 B  88  )
 
KERBm  3*FOUND in 5no8  size =    3  ^    BACCELL_00875;                                          #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.6787 -0.7186 -0.1517  0.7234  0.6897 -0.0306 -0.1267  0.0890 -0.9879    59.099   -92.559    77.714              
         T  <A  34   THR    > matches  <A 465   THR    >                        ( 16.7 A from    O1  GOL A 704  )
         K  <A  60   LYS    > matches  <A 415   LYS    >                        ( 19.8 A from    O1  GOL A 704  )
         E  <A 124   GLU    > matches  <A 511   GLU    >                        ( 20.1 A from    O2  GOL A 704  )
 
KERBm  3*FOUND in 1hty  size =    3  ^    ALPHA-MANNOSIDASE II;                                   #    4                            
  RMSD =     1.74 A
  TRANSFORM    0.9262  0.3168 -0.2044 -0.1359 -0.2252 -0.9648  0.3517 -0.9214  0.1655   -32.055    -2.294    77.035              
         T  <A  34   THR    > matches  <A 420   THR    >                        ( 16.4 A from    O1  TRS A1103  )
         K  <A  60   LYS    > matches  <A 426   LYS    >                        ( 11.8 A from    O1  TRS A1103  )
         E  <A 124   GLU    > matches  <A 861   GLU    >                        ( 31.5 A from    O1  TRS A1103  )
 
KERBm  3*FOUND in 1ez0  size =    3  ^    ALDEHYDE DEHYDROGENASE;                                 #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.2473 -0.7358  0.6305 -0.9689 -0.1889  0.1596 -0.0016  0.6504  0.7596    -6.594    48.716    -8.410              
         T  <A  34   THR    > matches  <A 117   THR    >                        ( 42.2 A from    O7N NAP A 650  )
         K  <A  60   LYS    > matches  <A 127   LYS    >                        ( 41.0 A from    O7N NAP A 650  )
         E  <A 124   GLU    > matches  <A 498   GLU    >                        ( 37.6 A from    O7N NAP A 650  )
 
KERBm  3*FOUND in 2cjq  size =    3  ^    RNA-DIRECTED RNA POLYMERASE;                            #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.4429 -0.6817  0.5823  0.8817 -0.2136  0.4206  0.1624 -0.6997 -0.6957    15.326    37.859    12.578              
         T  <A  34   THR    > matches  <A 637   THR    > 
         K  <A  60   LYS    > matches  <A 640   LYS    > 
         E  <A 124   GLU    > matches  <A 542   GLU    > 
 
KERBm  3*FOUND in 3mmp  size =    3  ^    ELONGATION FACTOR TU 2, ELONGATION FACTOR TS;           #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.6034  0.7848 -0.1414 -0.7968 -0.6005  0.0676  0.0318 -0.1535 -0.9876   106.032    18.564    52.658              
         T  <A  34   THR    > matches  <F 382   THR    > 
         K  <A  60   LYS    > matches  <F 376   LYS    > 
         E  <A 124   GLU    > matches  <F  74   GLU    > 
 
KERBm  3*FOUND in 3g65  size =    3  ^    CELL CYCLE CHECKPOINT CONTROL PROTEIN RAD9A;            #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.4264 -0.9031  0.0513  0.7437 -0.3178  0.5881  0.5148 -0.2889 -0.8071    38.955   -38.006    48.006              
         T  <A  34   THR    > matches  <B 142   THR    > 
         K  <A  60   LYS    > matches  <B  57   LYS    > 
         E  <A 124   GLU    > matches  <B  78   GLU    > 
 
KERBm  3*FOUND in 4dyn  size =    3  ^    NUCLEOCAPSID PROTEIN;                                   #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.7699 -0.3335  0.5440 -0.2032 -0.9363 -0.2864 -0.6049 -0.1099  0.7887    -0.833   -29.102    47.174              
         T  <A  34   THR    > matches  <A 188   THR    >                        ( 27.8 A from    O35 0MR A 601  )
         K  <A  60   LYS    > matches  <A 184   LYS    >                        ( 26.8 A from    O35 0MR A 601  )
         E  <A 124   GLU    > matches  <A 495   GLU    >                        ( 38.8 A from    O35 0MR A 601  )
 
KERBm  3*FOUND in 3cqy  size =    3  ^    ANHYDRO-N-ACETYLMURAMIC ACID KINASE;                    #    3                            
  RMSD =     1.74 A
  TRANSFORM    0.2455  0.5101 -0.8243 -0.4076  0.8258  0.3897 -0.8796 -0.2404 -0.4106    24.107   -69.059    84.734              
         T  <A  34   THR    > matches  <A 189   THR    >                        (  9.4 A from    O4  SIN A 374  )
         K  <A  60   LYS    > matches  <A 240   LYS    >                        ( 11.9 A from    O4  SIN A 374  )
         E  <A 124   GLU    > matches  <A 303   GLU    >                        ( 24.6 A from    O4  SIN A 374  )
 
KERBm  3*FOUND in 3idf  size =    3  ^    USP-LIKE PROTEIN;                                       #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.1134  0.9842 -0.1362 -0.1222 -0.1222 -0.9849  0.9860 -0.1283 -0.1064     9.611    43.085    25.845              
         T  <A  34   THR    > matches  <A  34   THR    >                        ( 22.1 A from    O4  SO4 A 139  )
         K  <A  60   LYS    > matches  <A   3   LYS    >                        ( 27.2 A from    O4  SO4 A 139  )
         E  <A 124   GLU    > matches  <A  61   GLU    >                        ( 22.6 A from    O1  SO4 A 139  )
 
KERBm  3*FOUND in 3o74  size =    3  ^    FRUCTOSE TRANSPORT SYSTEM REPRESSOR FRUR;               #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.8586  0.4345 -0.2720 -0.1636  0.2705  0.9487 -0.4858 -0.8591  0.1611    38.694   -38.691    36.074              
         T  <A  34   THR    > matches  <A 323   THR    >                        ( 15.9 A from    O3  GOL A 332  )
         K  <A  60   LYS    > matches  <A 325   LYS    >                        ( 16.3 A from    O3  GOL A 332  )
         E  <A 124   GLU    > matches  <A 302   GLU    >                        ( 22.2 A from    O1  GOL A 332  )
 
KERBm  3*FOUND in 3osg  size =    3  ^    MYB21;                                                  #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.1680 -0.6079 -0.7761  0.7187  0.6144 -0.3257 -0.6748  0.5030 -0.5401    42.428    -4.129    23.332              
         T  <A  34   THR    > matches  <A 133   THR    > 
         K  <A  60   LYS    > matches  <A  91   LYS    > 
         E  <A 124   GLU    > matches  <A 106   GLU    > 
 
KERBm  3*FOUND in 3mmp  size =    3  ^    ELONGATION FACTOR TU 2, ELONGATION FACTOR TS;           #    2                            
  RMSD =     1.74 A
  TRANSFORM   -0.6024  0.7650 -0.2277 -0.7754 -0.6286 -0.0605  0.1894 -0.1401 -0.9718   108.606    21.979    42.392              
         T  <A  34   THR    > matches  <F 381   THR    > 
         K  <A  60   LYS    > matches  <F 376   LYS    > 
         E  <A 124   GLU    > matches  <F  74   GLU    > 
 
KERBm  3*FOUND in 3aca  size =    3  ^    ADP-SUGAR PYROPHOSPHATASE;                              #    2                            
  RMSD =     1.74 A
  TRANSFORM   -0.3101 -0.3951  0.8647  0.1196 -0.9186 -0.3768 -0.9432  0.0134 -0.3321   -31.683    37.649    44.163              
         T  <A  34   THR    > matches  <A  52   THR    >                        (  8.5 A from    N3  8DD A   2  )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        ( 14.0 A from    O3' 8DD A   2  )
         E  <A 124   GLU    > matches  <A 115   GLU    >                        (  4.7 A from   MN    MN A   5  )
 
KERBm  3*FOUND in 1vem  size =    3  ^    BETA-AMYLASE;                                           #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.3709 -0.1846 -0.9102  0.0032 -0.9803  0.1975  0.9287 -0.0704 -0.3641    54.600    16.254   -10.943              
         T  <A  34   THR    > matches  <A 328   THR    >                        (  7.0 A from    O6  GLC A 901  )
         K  <A  60   LYS    > matches  <A 287   LYS    >                        ( -2.7 A from    O6  GLC A 901s )
         E  <A 124   GLU    > matches  <A 445   GLU    >                        ( 15.8 A from    C4  GLC A 906  )
 
KERBm  3*FOUND in 1of8  size =    3  ^    PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE,            #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.8546 -0.4967 -0.1514  0.2533 -0.6534  0.7133  0.4532 -0.5713 -0.6843   171.246   -40.013   -20.314              
         T  <A  34   THR    > matches  <A 204   THR    >                        (  6.8 A from    O1P PEP A1370  )
         K  <A  60   LYS    > matches  <A 252   LYS    >                        ( 13.2 A from    O1P PEP A1370  )
         E  <A 124   GLU    > matches  <A 111   GLU    >                        (-11.5 A from    C3  PEP A1370s )
 
KERBm  3*FOUND in 1fp2  size =    3  ^    ISOFLAVONE O-METHYLTRANSFERASE;                         #    2                            
  RMSD =     1.74 A
  TRANSFORM   -0.2927 -0.3336 -0.8961 -0.4137 -0.8007  0.4332  0.8621 -0.4975 -0.0963    19.928   -13.630    39.875              
         T  <A  34   THR    > matches  <A 201   THR    >                        (  6.3 A from    O   SAH A1699  )
         K  <A  60   LYS    > matches  <A 204   LYS    >                        ( 11.3 A from    O   SAH A1699  )
         E  <A 124   GLU    > matches  <A 318   GLU    >                        (  6.7 A from    C2  HMO A2000  )
 
KERBm  3*FOUND in 3fkd  size =    3  ^    L-THREONINE-O-3-PHOSPHATE DECARBOXYLASE;                #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.5621  0.7461  0.3569  0.6466 -0.6655  0.3728 -0.5156 -0.0212  0.8566    -5.215    15.312     9.870              
         T  <A  34   THR    > matches  <A 162   THR    > 
         K  <A  60   LYS    > matches  <A 187   LYS    > 
         E  <A 124   GLU    > matches  <A 101   GLU    > 
 
KERBm  3*FOUND in 3v10  size =    3  ^    RHUSIOPATHIAE SURFACE PROTEIN B;                        #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.9244  0.3740 -0.0757  0.3181 -0.6459  0.6940 -0.2107  0.6656  0.7160     8.015   -76.134   -35.746              
         T  <A  34   THR    > matches  <A 289   THR    > 
         K  <A  60   LYS    > matches  <A 220   LYS    > 
         E  <A 124   GLU    > matches  <A 260   GLU    > 
 
KERBm  3*FOUND in 5u2l  size =    3  ^    HEAT SHOCK PROTEIN 104;                                 #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.0827 -0.8316  0.5492  0.9939  0.0282 -0.1070 -0.0735 -0.5547 -0.8288     5.589   -24.136    63.456              
         T  <A  34   THR    > matches  <A  16   THR    > 
         K  <A  60   LYS    > matches  <A  20   LYS    > 
         E  <A 124   GLU    > matches  <A   2   GLU    > 
 
KERBm  3*FOUND in 1evy  size =    3  ^    GLYCEROL-3-PHOSPHATE DEHYDROGENASE;                     #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.0932  0.7065 -0.7016  0.9955  0.0766 -0.0551 -0.0148  0.7036  0.7105    -3.780   -44.518   -14.942              
         T  <A  34   THR    > matches  <A 277   THR    >                        ( 15.6 A from    C13 MYS A 500  )
         K  <A  60   LYS    > matches  <A 281   LYS    >                        ( 17.2 A from    C14 MYS A 500  )
         E  <A 124   GLU    > matches  <A 159   GLU    >                        ( 24.4 A from    C9  MYS A 500  )
 
KERBm  3*FOUND in 5exe  size =    3  ^    OXALATE OXIDOREDUCTASE SUBUNIT ALPHA;                   #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.7774  0.3869 -0.4959  0.6271 -0.4160  0.6586 -0.0485  0.8230  0.5660    44.219    -3.877   -19.611              
         T  <A  34   THR    > matches  <B 149   THR    >                        ( 14.9 A from    S2  SF4 C 401  )
         K  <A  60   LYS    > matches  <B  26   LYS    >                        ( 19.4 A from    S2  SF4 C 401  )
         E  <A 124   GLU    > matches  <C 169   GLU    >                        ( 22.3 A from   MG    MG C 403  )
 
KERBm  3*FOUND in 5lxe  size =    3  ^    F420-DEPENDENT GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1;     #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.1254 -0.4664  0.8756  0.7047  0.5794  0.4095  0.6983 -0.6684 -0.2561    -8.076    -6.632    17.720              
         T  <A  34   THR    > matches  <A  35   THR    >                        ( 22.3 A from    O3  GOL A 401  )
         K  <A  60   LYS    > matches  <A   8   LYS    >                        ( 22.3 A from    O3  GOL A 401  )
         E  <A 124   GLU    > matches  <A 223   GLU    >                        ( 37.4 A from    C3  GOL A 401  )
 
KERBm  3*FOUND in 3hj4  size =    3  ^    MINOR EDITOSOME-ASSOCIATED TUTASE;                      #    2                            
  RMSD =     1.74 A
  TRANSFORM   -0.9799  0.1556  0.1251 -0.1708 -0.3286 -0.9289  0.1034  0.9316 -0.3485    96.107     6.715   -19.053              
         T  <A  34   THR    > matches  <A  94   THR    > 
         K  <A  60   LYS    > matches  <A  98   LYS    > 
         E  <A 124   GLU    > matches  <A 305   GLU    > 
 
KERBm  3*FOUND in 5inw  size =    3  ^    PUTATIVE ANGIOTENSINOGEN;                               #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.5873  0.2195  0.7791  0.7326 -0.5535 -0.3963 -0.3442 -0.8034  0.4858   -85.028   196.573   324.301              
         T  <A  34   THR    > matches  <A 393   THR    > 
         K  <A  60   LYS    > matches  <A 391   LYS    > 
         E  <A 124   GLU    > matches  <A 406   GLU    > 
 
KERBm  3*FOUND in 3ijl  size =    3  ^    MUCONATE CYCLOISOMERASE;                                #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.1225  0.9270 -0.3545  0.0203  0.3548  0.9347 -0.9923  0.1217 -0.0247    -0.749   -33.655    58.102              
         T  <A  34   THR    > matches  <A 172   THR    >                        (  7.5 A from    N   PRO A 384  )
         K  <A  60   LYS    > matches  <A 198   LYS    >                        ( -3.3 A from    O   PRO A 384s )
         E  <A 124   GLU    > matches  <A 166   GLU    >                        ( 23.4 A from    N   PRO A 384  )
 
KERBm  3*FOUND in 1gte  size =    3  ^    DIHYDROPYRIMIDINE DEHYDROGENASE;                        #    2                            
  RMSD =     1.74 A
  TRANSFORM   -0.5435  0.8159  0.1974  0.5937  0.2074  0.7775 -0.5934 -0.5398  0.5971   -21.575  -123.064    41.309              
         T  <A  34   THR    > matches  <A  93   THR    >                        (  4.6 A from    S3  SF4 A1026  )
         K  <A  60   LYS    > matches  <A 497   LYS    >                        (  9.0 A from    S3  SF4 A1026  )
         E  <A 124   GLU    > matches  <A 375   GLU    >                        ( 10.8 A from    O4  FAD A1031  )
 
KERBm  3*FOUND in 1p32  size =    3  ^    MITOCHONDRIAL MATRIX PROTEIN, SF2P32;                   #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.0949  0.4183 -0.9033  0.2276 -0.8743 -0.4288  0.9691  0.2463  0.0122    36.404   -19.792   -36.164              
         T  <A  34   THR    > matches  <A 130   THR    > 
         K  <A  60   LYS    > matches  <A 128   LYS    > 
         E  <A 124   GLU    > matches  <A 258   GLU    > 
 
KERBm  3*FOUND in 2w00  size =    3  ^    HSDR;                                                   #    5                            
  RMSD =     1.74 A
  TRANSFORM   -0.4867  0.6164  0.6191 -0.7933 -0.6086 -0.0178 -0.3658  0.4998 -0.7851    16.952    74.512    50.685              
         T  <A  34   THR    > matches  <A 717   THR    >                        ( 19.7 A from    O1G ATP A1886  )
         K  <A  60   LYS    > matches  <A 722   LYS    >                        ( 22.9 A from    O1G ATP A1886  )
         E  <A 124   GLU    > matches  <A 593   GLU    >                        ( 13.0 A from    O1G ATP A1886  )
 
KERBm  3*FOUND in 5fp1  size =    3  ^    TONB-DEPENDENT SIDEROPHORE RECEPTOR;                    #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.1718  0.9268 -0.3340 -0.9851 -0.1601  0.0624 -0.0043 -0.3398 -0.9405   -15.448    52.964    92.142              
         T  <A  34   THR    > matches  <A  55   THR    >                        ( 24.6 A from    O12 C8E A1724  )
         K  <A  60   LYS    > matches  <A  53   LYS    >                        ( 27.9 A from    O12 C8E A1724  )
         E  <A 124   GLU    > matches  <A 265   GLU    >                        ( 10.2 A from    O12 C8E A1724  )
 
KERBm  3*FOUND in 2hsz  size =    3  ^    NOVEL PREDICTED PHOSPHATASE;                            #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.8945 -0.2935 -0.3372  0.4456  0.6469  0.6189 -0.0365  0.7038 -0.7094    54.631   -71.249   -17.745              
         T  <A  34   THR    > matches  <A 118   THR    >                        (  7.0 A from   CL    CL A 226  )
         K  <A  60   LYS    > matches  <A 151   LYS    >                        (  8.4 A from   CL    CL A 226  )
         E  <A 124   GLU    > matches  <A  88   GLU    >                        ( 12.4 A from    O4  UNL A 227  )
 
KERBm  3*FOUND in 5mq8  size =    3  ^    UNCHARACTERIZED PROTEIN YACP;                           #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.8645 -0.1296  0.4857  0.1694  0.9848 -0.0388  0.4733 -0.1158 -0.8733     6.772    -4.602    17.633              
         T  <A  34   THR    > matches  <A 160   THR    > 
         K  <A  60   LYS    > matches  <A 163   LYS    > 
         E  <A 124   GLU    > matches  <A 129   GLU    > 
 
KERBm  3*FOUND in 1m6y  size =    3  ^    S-ADENOSYL-METHYLTRANSFERASE MRAW;                      #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.5450 -0.7898  0.2814  0.0449 -0.3076 -0.9504 -0.8372 -0.5306  0.1322    47.334   -13.794    -8.729              
         T  <A  34   THR    > matches  <A 119   THR    >                        ( 13.9 A from    SD  SAH A 401  )
         K  <A  60   LYS    > matches  <A 112   LYS    >                        ( 15.2 A from    SD  SAH A 401  )
         E  <A 124   GLU    > matches  <A 195   GLU    >                        (  6.9 A from    O2  SO4 A 500  )
 
KERBm  3*FOUND in 3ht4  size =    3  ^    ALUMINUM RESISTANCE PROTEIN;                            #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.2513  0.9292  0.2711  0.1085  0.3053 -0.9461  0.9618  0.2083  0.1775     2.791    36.491    39.218              
         T  <A  34   THR    > matches  <A 166   THR    > 
         K  <A  60   LYS    > matches  <A 199   LYS    > 
         E  <A 124   GLU    > matches  <A 122   GLU    > 
 
KERBm  3*FOUND in 2ddu  size =    3  ^    REELIN;                                                 #    1                            
  RMSD =     1.74 A
  TRANSFORM    0.4189 -0.0739 -0.9050  0.1014  0.9943 -0.0342 -0.9024  0.0774 -0.4240    28.387   -29.149    27.102              
         T  <A  34   THR    > matches  <A1385   THR    >                        ( 32.4 A from   MG    MG A   3  )
         K  <A  60   LYS    > matches  <A1294+  LYS    >                        ( 37.9 A from   MG    MG A   3  )
         E  <A 124   GLU    > matches  <A1357   GLU    >                        ( 19.2 A from   MG    MG A   3  )
 
KERBm  3*FOUND in 3u84  size =    3  ^    MENIN;                                                  #    1                            
  RMSD =     1.74 A
  TRANSFORM   -0.0171  0.6938 -0.7199  0.6374  0.5623  0.5268 -0.7703  0.4499  0.4519    89.294    28.380    75.092              
         T  <A  34   THR    > matches  <A 438   THR    > 
         K  <A  60   LYS    > matches  <A 576   LYS    > 
         E  <A 124   GLU    > matches  <A 378   GLU    > 
 
KERBm  3*FOUND in 4cp6  size =    3  ^    CHOLINE BINDING PROTEIN PCPA;                           #    2                            
  RMSD =     1.75 A
  TRANSFORM   -0.4080  0.7656 -0.4974 -0.3365 -0.6325 -0.6976  0.8487  0.1172 -0.5157    40.659     5.630     4.761              
         T  <A  34   THR    > matches  <A 262   THR    > 
         K  <A  60   LYS    > matches  <A 283   LYS    > 
         E  <A 124   GLU    > matches  <A 244   GLU    > 
 
KERBm  3*FOUND in 5i9j  size =    3  ^    STAR-RELATED LIPID TRANSFER PROTEIN 3;                  #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.4269  0.3220 -0.8450 -0.8839 -0.0486 -0.4651  0.1908 -0.9455 -0.2638    23.083    39.362    56.936              
         T  <A  34   THR    > matches  <A 273   THR    >                        (  7.0 A from    H21 EDO A 503  )
         K  <A  60   LYS    > matches  <A 260   LYS    >                        ( 12.0 A from    H21 EDO A 503  )
         E  <A 124   GLU    > matches  <A 382   GLU    >                        ( 11.7 A from    H12 EDO A 503  )
 
KERBm  3*FOUND in 4kn8  size =    3  ^    THERMOSTABLE NPPASE;                                    #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.8506 -0.5256 -0.0117 -0.2962 -0.4606 -0.8367 -0.4344 -0.7152  0.5475    -3.689    -9.662    52.105              
         T  <A  34   THR    > matches  <A 231   THR    > 
         K  <A  60   LYS    > matches  <A 234   LYS    > 
         E  <A 124   GLU    > matches  <A  20   GLU    > 
 
KERBm  3*FOUND in 2r8r  size =    3  ^    SENSOR PROTEIN;                                         #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.9229 -0.0032 -0.3850 -0.3789  0.1843  0.9069 -0.0680 -0.9829  0.1714    88.783  -163.797    -3.057              
         T  <A  34   THR    > matches  <A 120   THR    >                        (  5.9 A from    O4  SO4 A 226  )
         K  <A  60   LYS    > matches  <A  16   LYS    >                        (  2.5 A from    O3  SO4 A 226  )
         E  <A 124   GLU    > matches  <A 109   GLU    >                        ( 16.3 A from    O2  PEG A 701  )
 
KERBm  3*FOUND in 3p8c  size =    3  ^    CYTOPLASMIC FMR1-INTERACTING PROTEIN 1;                 #    3                            
  RMSD =     1.75 A
  TRANSFORM    0.2048 -0.9551 -0.2141  0.0414  0.2270 -0.9730 -0.9779 -0.1904 -0.0860   107.127   204.232    56.975              
         T  <A  34   THR    > matches  <A  85   THR    >                        ( 10.7 A from   CL    CL A1255  )
         K  <A  60   LYS    > matches  <A 684   LYS    >                        ( 13.0 A from   CL    CL A1255  )
         E  <A 124   GLU    > matches  <A 434   GLU    >                        ( 16.7 A from    C1  GOL A1259  )
 
KERBm  3*FOUND in 1nkt  size =    3  ^    PREPROTEIN TRANSLOCASE SECA 1 SUBUNIT;                  #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.2848  0.0531 -0.9571  0.9139 -0.3162  0.2544  0.2892  0.9472  0.1386   199.089   -87.377   -61.897              
         T  <A  34   THR    > matches  <A 259   THR    >                        ( 62.9 A from   MG    MG A 951  )
         K  <A  60   LYS    > matches  <A 257   LYS    >                        ( 62.5 A from   MG    MG A 951  )
         E  <A 124   GLU    > matches  <A 271   GLU    >                        ( 67.1 A from   MG    MG A 951  )
 
KERBm  3*FOUND in 4bk0  size =    3  ^    ATP-DEPENDENT DNA HELICASE Q5;                          #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.3212 -0.0210 -0.9468  0.8908  0.3460  0.2945 -0.3215  0.9380 -0.1298    23.137   -24.271   -33.015              
         T  <A  34   THR    > matches  <A 546   THR    >                        (  0.0 A from   site AC2        )
         K  <A  60   LYS    > matches  <A 523+  LYS    > 
         E  <A 124   GLU    > matches  <A 559   GLU    > 
 
KERBm  3*FOUND in 5cwe  size =    3  ^    CYTOCHROME P450 HYDROXYLASE;                            #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.1039 -0.0994 -0.9896 -0.9854 -0.1451 -0.0889  0.1348 -0.9844  0.1131    34.254   -24.339    21.673              
         T  <A  34   THR    > matches  <A 284   THR    >                        ( -2.7 A from    O1A HEM A 403s )
         K  <A  60   LYS    > matches  <A  64   LYS    >                        (  4.2 A from    O1A HEM A 403  )
         E  <A 124   GLU    > matches  <A 277   GLU    >                        ( 12.5 A from    CMB HEM A 403  )
 
KERBm  3*FOUND in 2j5u  size =    3  ^    MREC PROTEIN;                                           #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.5928 -0.7161  0.3684 -0.5688  0.6962  0.4379  0.5701 -0.0500  0.8201    42.554  -123.380   -12.075              
         T  <A  34   THR    > matches  <A 241   THR    > 
         K  <A  60   LYS    > matches  <A 259   LYS    > 
         E  <A 124   GLU    > matches  <A  92   GLU    > 
 
KERBm  3*FOUND in 2prs  size =    3  ^    HIGH-AFFINITY ZINC UPTAKE SYSTEM PROTEIN ZNUA;          #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.1037  0.8121  0.5743  0.9356  0.1163 -0.3334  0.3375 -0.5719  0.7477    14.615   -16.229    17.392              
         T  <A  34   THR    > matches  <A 283   THR    >                        ( 13.0 A from   ZN    ZN A 501  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        ( 16.3 A from   ZN    ZN A 501  )
         E  <A 124   GLU    > matches  <A 265   GLU    >                        ( 20.3 A from   ZN    ZN A 501  )
 
KERBm  3*FOUND in 5mqr  size =    3  ^    BETA-L-ARABINOBIOSIDASE;                                #    2                            
  RMSD =     1.75 A
  TRANSFORM   -0.8857 -0.4418 -0.1428 -0.4541  0.7597  0.4656  0.0972 -0.4772  0.8734    62.574   -55.056    68.140              
         T  <A  34   THR    > matches  <A 901   THR    >                        ( 17.3 A from    O2  EDO A1206  )
         K  <A  60   LYS    > matches  <A 903   LYS    >                        ( 14.4 A from    O2  EDO A1206  )
         E  <A 124   GLU    > matches  <A1042   GLU    >                        ( 28.8 A from    C2  EPE A1204  )
 
KERBm  3*FOUND in 2z8n  size =    3  ^    27.5 KDA VIRULENCE PROTEIN;                             #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.9663 -0.2567  0.0186 -0.1538 -0.6342 -0.7577 -0.2063 -0.7293  0.6523    21.486    -0.855    13.091              
         T  <A  34   THR    > matches  <A 156   THR    >                        (  3.7 A from    O3  SO4 A 300  )
         K  <A  60   LYS    > matches  <A 104   LYS    >                        ( -2.8 A from    O2  SO4 A 300s )
         E  <A 124   GLU    > matches  <A 141   GLU    >                        ( 12.1 A from    O3  SO4 A 302  )
 
KERBm  3*FOUND in 4z7k  size =    3  ^    UNCHARACTERIZED PROTEIN CAS6B;                          #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.9619  0.0076 -0.2732  0.2493 -0.3852 -0.8885  0.1120  0.9228 -0.3687    37.918    -7.323    47.937              
         T  <A  34   THR    > matches  <A 119   THR    > 
         K  <A  60   LYS    > matches  <A  55   LYS    > 
         E  <A 124   GLU    > matches  <A 137   GLU    > 
 
KERBm  3*FOUND in 2qih  size =    3  ^    PROTEIN USPA1;                                          #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.0638 -0.7200 -0.6910  0.6851 -0.5350  0.4943  0.7256  0.4419 -0.5275    31.189    13.100     0.773              
         T  <A  34   THR    > matches  <A 635   THR    >                        ( 12.7 A from   CL    CL A1009  )
         K  <A  60   LYS    > matches  <A 638   LYS    >                        ( 14.8 A from   CL    CL A1009  )
         E  <A 124   GLU    > matches  <A 621   GLU    >                        ( 10.2 A from    O4  PO4 A1004  )
 
KERBm  3*FOUND in 3cx5  size =    3  ^    CYTOCHROME B-C1 COMPLEX SUBUNIT 1, MITOCHONDRIAL;       #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.7983 -0.5080 -0.3234 -0.5945 -0.5792 -0.5578 -0.0960 -0.6376  0.7644   -15.976    37.291   -48.071              
         T  <A  34   THR    > matches  <D  84   THR    >                        ( 16.4 A from    O14 7PH D4014  )
         K  <A  60   LYS    > matches  <I  47   LYS    >                        ( 20.3 A from    O14 7PH D4014  )
         E  <A 124   GLU    > matches  <C  66   GLU    >                        ( 10.2 A from    O1A HEM C4001  )
 
KERBm  3*FOUND in 1n1t  size =    3  ^    SIALIDASE;                                              #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.4940  0.2645 -0.8282  0.5594  0.8259 -0.0698 -0.6656  0.4978  0.5560    34.548   -15.563    33.111              
         T  <A  34   THR    > matches  <A 125   THR    >                        (  4.1 A from    O9  DAN A 700  )
         K  <A  60   LYS    > matches  <A 177   LYS    >                        ( 10.4 A from    O9  DAN A 700  )
         E  <A 124   GLU    > matches  <A 361   GLU    >                        (  5.8 A from    O1A DAN A 700  )
 
KERBm  3*FOUND in 4v1t  size =    3  ^    LYND;                                                   #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.2480 -0.3031 -0.9201  0.7853 -0.6190 -0.0078  0.5672  0.7245 -0.3916     4.010   -54.949     3.187              
         T  <A  34   THR    > matches  <A 285   THR    >                        ( 19.6 A from   ZN    ZN A 776  )
         K  <A  60   LYS    > matches  <A 289   LYS    >                        ( 19.6 A from   ZN    ZN A 776  )
         E  <A 124   GLU    > matches  <A 108   GLU    >                        ( 33.2 A from   ZN    ZN A 776  )
 
KERBm  3*FOUND in 3b7y  size =    3  ^    E3 UBIQUITIN-PROTEIN LIGASE NEDD4;                      #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.4636  0.0308  0.8855  0.6808 -0.6520 -0.3338 -0.5671 -0.7576  0.3233    26.332    19.874    33.975              
         T  <A  34   THR    > matches  <A 249   THR    >                        ( 31.5 A from   CA    CA A 302  )
         K  <A  60   LYS    > matches  <A 247   LYS    >                        ( 31.4 A from   CA    CA A 302  )
         E  <A 124   GLU    > matches  <A 115   GLU    >                        ( 34.9 A from   CA    CA A 301  )
 
KERBm  3*FOUND in 4hsb  size =    3  ^    PROBABLE DNA-3-METHYLADENINE GLYCOSYLASE 2;             #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.1925  0.3682  0.9096 -0.1556  0.9266 -0.3422  0.9689  0.0757 -0.2357    34.358     3.802    10.785              
         T  <A  34   THR    > matches  <A 181   THR    >                        ( 20.3 A from    O4  PEG A 301  )
         K  <A  60   LYS    > matches  <A 166   LYS    >                        ( 20.4 A from    C1  PEG A 302  )
         E  <A 124   GLU    > matches  <A 131   GLU    >                        ( 18.4 A from    O4  PEG A 301  )
 
KERBm  3*FOUND in 4l79  size =    3  ^    UNCONVENTIONAL MYOSIN-IB;                               #    2                            
  RMSD =     1.75 A
  TRANSFORM   -0.7309 -0.5161  0.4466 -0.6741  0.4439 -0.5904 -0.1064  0.7326  0.6723    40.689   100.384   -41.063              
         T  <A  34   THR    > matches  <A 709   THR    >                        ( 86.9 A from   MG    MG A 801  )
         K  <A  60   LYS    > matches  <A 713   LYS    >                        ( 91.4 A from   MG    MG A 801  )
         E  <A 124   GLU    > matches  <A 697   GLU    >                        ( 68.8 A from   MG    MG A 801  )
 
KERBm  3*FOUND in 6e12  size =    3  ^    ALR8543 PROTEIN;                                        #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.7116 -0.1334  0.6898  0.5806 -0.4413 -0.6842 -0.3957 -0.8874  0.2366   -39.941    -8.299    95.179              
         T  <A  34   THR    > matches  <A  43   THR    >                        (  7.6 A from    C17 OLA A 301  )
         K  <A  60   LYS    > matches  <A  46   LYS    >                        ( 11.4 A from    C18 OLA A 301  )
         E  <A 124   GLU    > matches  <A  15   GLU    >                        ( 19.7 A from    O1  OLA A 301  )
 
KERBm  3*FOUND in 4h3s  size =    3  ^    GLUTAMINE-TRNA LIGASE;                                  #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.7193 -0.5265  0.4532  0.6913  0.4783 -0.5416 -0.0684 -0.7029 -0.7080    64.343    39.071    37.792              
         T  <A  34   THR    > matches  <A 430   THR    >                        (  3.3 A from    H12 GOL A 909s )
         K  <A  60   LYS    > matches  <A 433   LYS    >                        ( -2.8 A from    HO1 GOL A 905s )
         E  <A 124   GLU    > matches  <A 301   GLU    >                        (  9.1 A from    HO2 GOL A 907  )
 
KERBm  3*FOUND in 1r76  size =    3  ^    PECTATE LYASE;                                          #    2                            
  RMSD =     1.75 A
  TRANSFORM    0.5074 -0.4571  0.7305 -0.7731 -0.6159  0.1516 -0.3806  0.6417  0.6658     2.376    44.543   -20.796              
         T  <A  34   THR    > matches  <A 416   THR    >                        ( 20.7 A from    O1  GOL A4901  )
         K  <A  60   LYS    > matches  <A 373   LYS    >                        ( 23.3 A from    C1  IPA A8244  )
         E  <A 124   GLU    > matches  <A 310   GLU    >                        (  9.7 A from    C3  GOL A4901  )
 
KERBm  3*FOUND in 3l6b  size =    3  ^    SERINE RACEMASE;                                        #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.1810 -0.7231  0.6666 -0.1508  0.6902  0.7077  0.9718 -0.0276  0.2340    59.805    -9.034    34.728              
         T  <A  34   THR    > matches  <A 235   THR    >                        (  8.4 A from   MN    MN A 347  )
         K  <A  60   LYS    > matches  <A 241   LYS    >                        (  9.1 A from    O7  MLI A 348  )
         E  <A 124   GLU    > matches  <A 276   GLU    >                        ( 20.6 A from    C2A PLP A 350  )
 
KERBm  3*FOUND in 5j1s  size =    3  ^    TORSIN-1A;                                              #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.9000  0.3123  0.3043 -0.2081  0.3056 -0.9291  0.3831  0.8995  0.2100     3.985   -22.416    37.557              
         T  <A  34   THR    > matches  <A 106   THR    >                        ( -4.9 A from    O1B ATP A 401s )
         K  <A  60   LYS    > matches  <A 108   LYS    >                        ( -2.7 A from    O3G ATP A 401s )
         E  <A 124   GLU    > matches  <A 294   GLU    >                        ( 15.3 A from    C2  ATP A 401  )
 
KERBm  3*FOUND in 1ecl  size =    3  ^    ESCHERICHIA COLI TOPOISOMERASE I;                       #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.3516  0.5156  0.7813  0.0239 -0.8294  0.5581 -0.9358 -0.2149 -0.2793   -26.891    -8.389    72.836              
         T  <A  34   THR    > matches  <A  16   THR    > 
         K  <A  60   LYS    > matches  <A  19   LYS    > 
         E  <A 124   GLU    > matches  <A 117   GLU    > 
 
KERBm  3*FOUND in 1yf2  size =    3  ^    TYPE I RESTRICTION-MODIFICATION ENZYME, S SUBUNIT;      #    2                            
  RMSD =     1.75 A
  TRANSFORM    0.5067  0.6739 -0.5376  0.8058 -0.1487  0.5732 -0.3063  0.7237  0.6184    17.747   -16.610   -45.829              
         T  <A  34   THR    > matches  <A  69   THR    > 
         K  <A  60   LYS    > matches  <A  72   LYS    > 
         E  <A 124   GLU    > matches  <A 186   GLU    > 
 
KERBm  3*FOUND in 1ps3  size =    3  ^    ALPHA-MANNOSIDASE II;                                   #    3                            
  RMSD =     1.75 A
  TRANSFORM    0.9265  0.3126 -0.2096 -0.1403 -0.2300 -0.9630  0.3493 -0.9216  0.1692   -31.921    -1.785    77.204              
         T  <A  34   THR    > matches  <A 420   THR    >                        ( 16.5 A from    O4  KIF A1501  )
         K  <A  60   LYS    > matches  <A 426   LYS    >                        ( 11.8 A from    O4  KIF A1501  )
         E  <A 124   GLU    > matches  <A 861   GLU    >                        ( 30.9 A from    C6  KIF A1501  )
 
KERBm  3*FOUND in 2ow6  size =    3  ^    ALPHA-MANNOSIDASE 2;                                    #    3                            
  RMSD =     1.75 A
  TRANSFORM    0.9268  0.3111 -0.2103 -0.1427 -0.2262 -0.9636  0.3473 -0.9231  0.1653   -31.725    -1.987    77.173              
         T  <A  34   THR    > matches  <A 420   THR    >                        ( 16.5 A from    O7  NK1 A4001  )
         K  <A  60   LYS    > matches  <A 426   LYS    >                        ( 11.8 A from    O7  NK1 A4001  )
         E  <A 124   GLU    > matches  <A 861   GLU    >                        ( 27.4 A from    O3  PO4 A2002  )
 
KERBm  3*FOUND in 2z2u  size =    3  ^    UPF0026 PROTEIN MJ0257;                                 #    3                            
  RMSD =     1.75 A
  TRANSFORM   -0.9793 -0.1579  0.1267  0.0413 -0.7684 -0.6386 -0.1982  0.6202 -0.7590    40.194    21.085     5.181              
         T  <A  34   THR    > matches  <A 177   THR    > 
         K  <A  60   LYS    > matches  <A 216   LYS    > 
         E  <A 124   GLU    > matches  <A 127   GLU    > 
 
KERBm  3*FOUND in 4rya  size =    3  ^    ABC TRANSPORTER SUBSTRATE BINDING PROTEIN (SORBITOL     #    3                            
  RMSD =     1.75 A
  TRANSFORM   -0.7883 -0.0242  0.6148  0.2014 -0.9543  0.2207 -0.5813 -0.2978 -0.7572    47.563    -2.912    78.890              
         T  <A  34   THR    > matches  <A 378   THR    >                        (  8.9 A from    O   ACT A 502  )
         K  <A  60   LYS    > matches  <A 294   LYS    >                        ( -4.6 A from    CH3 ACT A 502s )
         E  <A 124   GLU    > matches  <A 428   GLU    >                        ( 25.7 A from    O6  MTL A 501  )
 
KERBm  3*FOUND in 3h5z  size =    3  ^    GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE;               #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.1403  0.8835 -0.4470 -0.7241  0.3994  0.5622 -0.6752 -0.2448 -0.6958    -2.093   -47.118    63.437              
         T  <A  34   THR    > matches  <A  27   THR    >                        (  9.8 A from    UNK UNX A3006  )
         K  <A  60   LYS    > matches  <A  29   LYS    >                        ( 14.8 A from    UNK UNX A3006  )
         E  <A 124   GLU    > matches  <A 165   GLU    >                        (  9.9 A from    O1  EDO A2001  )
 
KERBm  3*FOUND in 2og1  size =    3  ^    2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOATE HYDROLASE     #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.4559 -0.3266  0.8280 -0.8678 -0.3697  0.3320 -0.1976  0.8699  0.4520     5.989    18.835   -66.687              
         T  <A  34   THR    > matches  <A 167   THR    >                        ( 13.7 A from    O4  SO4 A 502  )
         K  <A  60   LYS    > matches  <A 158   LYS    >                        ( 17.0 A from    O4  SO4 A 502  )
         E  <A 124   GLU    > matches  <A 185   GLU    >                        ( -5.9 A from    O1  GOL A 601s )
 
KERBm  3*FOUND in 1vma  size =    3  ^    CELL DIVISION PROTEIN FTSY;                             #    2                            
  RMSD =     1.75 A
  TRANSFORM   -0.2385 -0.7697 -0.5921  0.9117 -0.3875  0.1365  0.3346  0.5073 -0.7942    37.464    -6.529    33.969              
         T  <A  34   THR    > matches  <A 103   THR    >                        (  5.8 A from   MG    MG A 295  )
         K  <A  60   LYS    > matches  <A 246   LYS    >                        (  6.5 A from   MG    MG A 295  )
         E  <A 124   GLU    > matches  <A 235   GLU    >                        ( 22.9 A from   MG    MG A 295  )
 
KERBm  3*FOUND in 3aa0  size =    3  ^    F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA-1;                #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.2875 -0.9307  0.2262  0.7164  0.3657  0.5941  0.6357  0.0087 -0.7719     0.431   -11.824    39.600              
         T  <A  34   THR    > matches  <B 179   THR    >                        ( 27.0 A from    O1  CO3 B 245  )
         K  <A  60   LYS    > matches  <B 181   LYS    >                        ( 30.2 A from    O1  CO3 B 245  )
         E  <A 124   GLU    > matches  <B  22   GLU    >                        ( 23.2 A from    O2  CO3 B 245  )
 
KERBm  3*FOUND in 3dx5  size =    3  ^    UNCHARACTERIZED PROTEIN ASBF;                           #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.7101 -0.4982  0.4975  0.4807  0.1733  0.8596  0.5145 -0.8496 -0.1164   106.070   -55.608    56.342              
         T  <A  34   THR    > matches  <A  65   THR    >                        ( 10.1 A from    O3  GOL A 291  )
         K  <A  60   LYS    > matches  <A 100   LYS    >                        ( 11.9 A from    O3  GOL A 291  )
         E  <A 124   GLU    > matches  <A  26   GLU    >                        ( 18.9 A from    O3  GOL A 291  )
 
KERBm  3*FOUND in 5wtk  size =    3  ^    CRISPR-ASSOCIATED ENDORIBONUCLEASE C2C2;                #    2                            
  RMSD =     1.75 A
  TRANSFORM   -0.8664  0.4334  0.2479  0.4866  0.8443  0.2245  0.1120 -0.3152  0.9424    15.250  -106.324   -43.609              
         T  <A  34   THR    > matches  <A1311   THR    > 
         K  <A  60   LYS    > matches  <A 474   LYS    > 
         E  <A 124   GLU    > matches  <A 513   GLU    > 
 
KERBm  3*FOUND in 4aec  size =    3  ^    CYSTEINE SYNTHASE, MITOCHONDRIAL;                       #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.9710  0.0606  0.2311 -0.1295 -0.9464 -0.2959 -0.2008  0.3173 -0.9268    59.567    14.033    15.144              
         T  <A  34   THR    > matches  <A 227   THR    >                        ( 19.0 A from    O3  PLP A 500  )
         K  <A  60   LYS    > matches  <A 239   LYS    >                        ( 24.6 A from    O3  PLP A 500  )
         E  <A 124   GLU    > matches  <A 212   GLU    >                        ( 17.3 A from    C2A PLP A 500  )
 
KERBm  3*FOUND in 5iky  size =    3  ^    OXALATE BIOSYNTHETIC COMPONENT 1;                       #    2                            
  RMSD =     1.75 A
  TRANSFORM   -0.4704 -0.0576 -0.8806 -0.8218 -0.3350  0.4609  0.3215 -0.9405 -0.1102    36.722   -13.555   -15.217              
         T  <A  34   THR    > matches  <A   4   THR    >                        ( 24.3 A from   MG    MG A1201  )
         K  <A  60   LYS    > matches  <A   2+  LYS    >                        ( 28.4 A from   MG    MG A1201  )
         E  <A 124   GLU    > matches  <A 271   GLU    >                        ( 20.5 A from   MG    MG A1201  )
 
KERBm  3*FOUND in 4edg  size =    3  ^    DNA PRIMASE;                                            #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.3667  0.1171  0.9229  0.6436  0.6844 -0.3426  0.6718 -0.7196 -0.1756    24.513    14.807   -24.793              
         T  <A  34   THR    > matches  <A 288   THR    >                        (  7.3 A from    N3 BATP A 503  )
         K  <A  60   LYS    > matches  <A 242   LYS    >                        (  8.5 A from    C2 AATP A 503  )
         E  <A 124   GLU    > matches  <A 346   GLU    >                        (  4.6 A from   MN    MN A 505  )
 
KERBm  3*FOUND in 1wyu  size =    3  ^    GLYCINE DEHYDROGENASE (DECARBOXYLATING) SUBUNIT 1;      #    1                            
  RMSD =     1.75 A
  TRANSFORM    0.8878 -0.2911  0.3564  0.0632  0.8443  0.5322  0.4558  0.4500 -0.7680   -58.688   -70.915    13.640              
         T  <A  34   THR    > matches  <B  75   THR    >                        (  8.5 A from    O3  PLP B 475  )
         K  <A  60   LYS    > matches  <B  77   LYS    >                        ( 13.6 A from    O3  PLP B 475  )
         E  <A 124   GLU    > matches  <A 307   GLU    >                        ( 11.2 A from    O3P PLP B 475  )
 
KERBm  3*FOUND in 4ofj  size =    3  ^    EXTRACYTOPLASMIC NICKEL-BINDING PROTEIN SANIKA;         #    1                            
  RMSD =     1.75 A
  TRANSFORM   -0.5541 -0.2041  0.8070 -0.8020  0.3907 -0.4519  0.2231  0.8976  0.3802    39.838    27.555   -48.996              
         T  <A  34   THR    > matches  <A 470   THR    >                        (  8.3 A from    O3  GOL A 519  )
         K  <A  60   LYS    > matches  <A   9   LYS    >                        ( 11.9 A from    O3  GOL A 519  )
         E  <A 124   GLU    > matches  <A 460   GLU    >                        (  5.4 A from    O3  GOL A 509  )
 
KERBm  3*FOUND in 1mrz  size =    3  ^    RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE;              #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.8521  0.0255 -0.5228 -0.5027 -0.2380 -0.8310  0.1456 -0.9709  0.1900    -4.806    18.874    11.677              
         T  <A  34   THR    > matches  <A 180   THR    >                        ( 32.2 A from    O2  CIT A 295  )
         K  <A  60   LYS    > matches  <A 178+  LYS    >                        ( 37.4 A from    O2  CIT A 295  )
         E  <A 124   GLU    > matches  <A 161   GLU    >                        ( 16.2 A from    O2  CIT A 295  )
 
KERBm  3*FOUND in 1twf  size =    3  ^    DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT;         #   10                            
  RMSD =     1.76 A
  TRANSFORM    0.4659 -0.5178  0.7175 -0.7306 -0.6825 -0.0182 -0.4991  0.5158  0.6963    -2.378    60.184   -23.154              
         T  <A  34   THR    > matches  <A  13   THR    >                        ( 19.6 A from   ZN    ZN B3007  )
         K  <A  60   LYS    > matches  <A  15   LYS    >                        ( 21.1 A from   ZN    ZN B3007  )
         E  <A 124   GLU    > matches  <A  72   GLU    >                        (  5.5 A from   ZN    ZN A3008  )
 
KERBm  3*FOUND in 2qkd  size =    3  ^    ZINC FINGER PROTEIN ZPR1;                               #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.1896 -0.9491  0.2515  0.2616 -0.2958 -0.9187 -0.9464  0.1084 -0.3044   165.211    29.162    -8.443              
         T  <A  34   THR    > matches  <A 312   THR    >                        (  7.2 A from    O1  FMT A 778  )
         K  <A  60   LYS    > matches  <A 427   LYS    >                        (  9.0 A from    O1  FMT A 778  )
         E  <A 124   GLU    > matches  <A 386   GLU    >                        ( 19.2 A from    O2  FMT A 778  )
 
KERBm  3*FOUND in 2hcn  size =    3  ^    RNA-DIRECTED RNA POLYMERASE (NS5);                      #    2                            
  RMSD =     1.76 A
  TRANSFORM   -0.5387 -0.5689 -0.6214 -0.7810  0.0606  0.6216  0.3160 -0.8201  0.4770    84.656    -6.964     6.545              
         T  <A  34   THR    > matches  <A 380   THR    >                        ( 21.6 A from   CA    CA A   1  )
         K  <A  60   LYS    > matches  <A 554   LYS    >                        ( 25.5 A from   ZN    ZN A   2  )
         E  <A 124   GLU    > matches  <A 658   GLU    >                        ( 20.8 A from   CA    CA A   1  )
 
KERBm  3*FOUND in 4gb7  size =    3  ^    6-AMINOHEXANOATE-DIMER HYDROLASE;                       #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.5398  0.6025  0.5879  0.1574 -0.6138  0.7736 -0.8270 -0.5101 -0.2365    10.086    13.328    43.422              
         T  <A  34   THR    > matches  <A 164   THR    >                        ( 28.1 A from    O1  NO3 A 601  )
         K  <A  60   LYS    > matches  <A 170   LYS    >                        ( 30.8 A from    O1  NO3 A 601  )
         E  <A 124   GLU    > matches  <A 153   GLU    >                        ( 23.9 A from    O2  NO3 A 602  )
 
KERBm  3*FOUND in 3err  size =    3  ^    FUSION PROTEIN OF MICROTUBULE BINDING DOMAIN FROM M     #    2                            
  RMSD =     1.76 A
  TRANSFORM   -0.3901  0.7725  0.5010  0.6097 -0.1910  0.7692 -0.6899 -0.6056  0.3965    28.100   -79.003    33.717              
         T  <A  34   THR    > matches  <A 225   THR    >                        (  5.1 A from    O1P AMP A1507  )
         K  <A  60   LYS    > matches  <A 277   LYS    >                        ( -3.6 A from    O1P AMP A1507s )
         E  <A 124   GLU    > matches  <A 237   GLU    >                        ( 24.1 A from    O1P AMP A1507  )
 
KERBm  3*FOUND in 3owa  size =    3  ^    ACYL-COA DEHYDROGENASE;                                 #    3                            
  RMSD =     1.76 A
  TRANSFORM    0.9383  0.2333  0.2554 -0.1001  0.8899 -0.4451  0.3311 -0.3921 -0.8583     4.017    -8.662    19.988              
         T  <A  34   THR    > matches  <A 418   THR    >                        ( 15.2 A from    N6A FAD A 601  )
         K  <A  60   LYS    > matches  <A 422   LYS    >                        ( 21.5 A from    N6A FAD A 601  )
         E  <A 124   GLU    > matches  <A 367   GLU    >                        (  5.9 A from    C22 1PE A 602  )
 
KERBm  3*FOUND in 1v84  size =    3  ^    GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-              #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.4674  0.6786 -0.5666  0.8778  0.2799 -0.3888  0.1052  0.6791  0.7265    33.519   -35.906   -24.076              
         T  <A  34   THR    > matches  <A 148   THR    >                        (  5.9 A from    O4  UDP A 503  )
         K  <A  60   LYS    > matches  <A 153   LYS    >                        ( -2.8 A from    O4  UDP A 503s )
         E  <A 124   GLU    > matches  <A 179   GLU    >                        ( 19.8 A from    O2  UDP A 503  )
 
KERBm  3*FOUND in 5fr1  size =    3  ^    TRANSFORMING PROTEIN RHOA;                              #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.1312  0.0166 -0.9912 -0.2513  0.9667  0.0495 -0.9590 -0.2555  0.1227    34.109    12.409    12.621              
         T  <A  34   THR    > matches  <B 197   THR    >                        ( 19.3 A from    HCA ALY B 141  )
         K  <A  60   LYS    > matches  <B 199   LYS    >                        ( 23.4 A from    N   ALY B 141  )
         E  <A 124   GLU    > matches  <B  95   GLU    >                        ( 21.3 A from    O   ALY B 127  )
 
KERBm  3*FOUND in 1tjl  size =    3  ^    DNAK SUPPRESSOR PROTEIN;                                #    3                            
  RMSD =     1.76 A
  TRANSFORM   -0.5893 -0.2099  0.7802  0.6594 -0.6830  0.3142 -0.4669 -0.6996 -0.5409    29.856   -21.155    21.884              
         T  <A  34   THR    > matches  <A 131   THR    >                        ( 15.8 A from   ZN    ZN A 200  )
         K  <A  60   LYS    > matches  <A 101   LYS    >                        ( 13.9 A from   ZN    ZN A 200  )
         E  <A 124   GLU    > matches  <A  25   GLU    >                        ( 19.7 A from   ZN    ZN A 200  )
 
KERBm  3*FOUND in 3fg1  size =    3  ^    ALLENE OXIDE SYNTHASE-LIPOXYGENASE PROTEIN;             #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.7291 -0.1826  0.6596 -0.6153 -0.5969  0.5149 -0.2997  0.7813  0.5476    17.152   -45.693    13.089              
         T  <A  34   THR    > matches  <A 544   THR    >                        (  9.4 A from    O2  GOL A2306  )
         K  <A  60   LYS    > matches  <A 547   LYS    >                        ( 10.3 A from   FE   FE2 A1500  )
         E  <A 124   GLU    > matches  <A 508   GLU    >                        ( 13.8 A from   CL    CL A2401  )
 
KERBm  3*FOUND in 2xwp  size =    3  ^    SIROHYDROCHLORIN COBALTOCHELATASE;                      #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.2751 -0.0969 -0.9565 -0.9609  0.0596  0.2703 -0.0308 -0.9935  0.1095     9.339    -9.506   -24.777              
         T  <A  34   THR    > matches  <A  43   THR    >                        ( -6.1 A from    O2A SIR A1259s )
         K  <A  60   LYS    > matches  <A  92   LYS    >                        ( -2.7 A from    O2A SIR A1259s )
         E  <A 124   GLU    > matches  <A  19   GLU    >                        ( 14.7 A from    O1C SIR A1259  )
 
KERBm  3*FOUND in 1bf6  size =    3  ^    PHOSPHOTRIESTERASE HOMOLOGY PROTEIN;                    #    3                            
  RMSD =     1.76 A
  TRANSFORM   -0.0548  0.9426  0.3293 -0.1617 -0.3338  0.9287 -0.9853  0.0024 -0.1707    48.672    19.572     4.780              
         T  <A  34   THR    > matches  <A 210   THR    >                        (  7.7 A from    O4  SO4 A 295  )
         K  <A  60   LYS    > matches  <A 213   LYS    >                        ( -2.9 A from    O3  SO4 A 295s )
         E  <A 124   GLU    > matches  <A 167   GLU    >                        (  4.5 A from    O2  SO4 A 294  )
 
KERBm  3*FOUND in 2o6x  size =    3  ^    SECRETED CATHEPSIN L 1;                                 #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.2050 -0.8646 -0.4587  0.7188  0.1850 -0.6701 -0.6643  0.4671 -0.5836    59.144    12.031    36.223              
         T  <A  34   THR    > matches  <A 207   THR    > 
         K  <A  60   LYS    > matches  <A 205   LYS    > 
         E  <A 124   GLU    > matches  <A  93   GLU    > 
 
KERBm  3*FOUND in 1t1u  size =    3  ^    CHOLINE O-ACETYLTRANSFERASE;                            #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.9892 -0.1281 -0.0707 -0.0043  0.5085 -0.8610 -0.1462  0.8515  0.5036    27.023    47.159    41.362              
         T  <A  34   THR    > matches  <A 414   THR    > 
         K  <A  60   LYS    > matches  <A 418   LYS    > 
         E  <A 124   GLU    > matches  <A 347   GLU    > 
 
KERBm  3*FOUND in 3ai7  size =    3  ^    XYLULOSE-5-PHOSPHATE/FRUCTOSE-6-PHOSPHATE PHOSPHOKE     #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.6948 -0.3222 -0.6430  0.4323 -0.9016 -0.0153  0.5748  0.2886 -0.7657    12.569     0.241    37.002              
         T  <A  34   THR    > matches  <A  67   THR    >                        ( -3.4 A from    O2B TPP A 900s )
         K  <A  60   LYS    > matches  <A 300   LYS    >                        ( -2.6 A from    O1B TPP A 900s )
         E  <A 124   GLU    > matches  <A 146   GLU    >                        ( 16.8 A from    N4' TPP A 900  )
 
KERBm  3*FOUND in 4fhr  size =    3  ^    FLAGELLAR MOTOR SWITCH PROTEIN FLIM;                    #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.8983  0.4118 -0.1531  0.0001 -0.3483 -0.9374  0.4393  0.8421 -0.3128     4.212    30.554    13.877              
         T  <A  34   THR    > matches  <B 156   THR    > 
         K  <A  60   LYS    > matches  <B 219   LYS    > 
         E  <A 124   GLU    > matches  <A 147   GLU    > 
 
KERBm  3*FOUND in 6f9t  size =    3  ^    ANGIOTENSIN-CONVERTING ENZYME;                          #    2                            
  RMSD =     1.76 A
  TRANSFORM   -0.7743  0.4106  0.4815 -0.3885 -0.9091  0.1504 -0.4994  0.0706 -0.8635    17.841     0.795    23.154              
         T  <A  34   THR    > matches  <A  97   THR    >                        (  9.4 A from    H21 EDO A 719  )
         K  <A  60   LYS    > matches  <A 101   LYS    >                        ( 11.9 A from    H21 EDO A 719  )
         E  <A 124   GLU    > matches  <A 133   GLU    >                        ( 15.6 A from    H21 PEG A 721  )
 
KERBm  3*FOUND in 2ogw  size =    3  ^    HIGH-AFFINITY ZINC UPTAKE SYSTEM PROTEIN ZNUA           #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.8266 -0.0634  0.5592  0.1639 -0.9235 -0.3469 -0.5384 -0.3784  0.7529    -2.476    57.037    62.789              
         T  <A  34   THR    > matches  <A 283   THR    >                        ( 12.9 A from   ZN    ZN A 500  )
         K  <A  60   LYS    > matches  <A  33   LYS    >                        ( 16.4 A from   ZN    ZN A 500  )
         E  <A 124   GLU    > matches  <A 265   GLU    >                        ( 20.0 A from   ZN    ZN A 500  )
 
KERBm  3*FOUND in 1s70  size =    3  ^    SERINE/THREONINE PROTEIN PHOSPHATASE PP1-BETA           #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.6989  0.2735 -0.6608 -0.2491  0.7730  0.5834 -0.6704 -0.5724  0.4721    71.077  -110.894    -8.776              
         T  <A  34   THR    > matches  <B 234   THR    > 
         K  <A  60   LYS    > matches  <B 228   LYS    > 
         E  <A 124   GLU    > matches  <B 282   GLU    > 
 
KERBm  3*FOUND in 3phs  size =    3  ^    CELL WALL SURFACE ANCHOR FAMILY PROTEIN;                #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.5070 -0.0227  0.8616 -0.0486  0.9973  0.0549  0.8606  0.0697 -0.5045   -30.629   -29.126    35.144              
         T  <A  34   THR    > matches  <A  88   THR    > 
         K  <A  60   LYS    > matches  <A  92   LYS    > 
         E  <A 124   GLU    > matches  <A 180   GLU    > 
 
KERBm  3*FOUND in 1g41  size =    3  ^    HEAT SHOCK PROTEIN HSLU;                                #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.8256  0.1710  0.5377  0.5575  0.1008  0.8240 -0.0867 -0.9801  0.1786    24.167   -47.730    40.584              
         T  <A  34   THR    > matches  <A  64   THR    >                        ( -3.0 A from    O2A ADP A 450s )
         K  <A  60   LYS    > matches  <A  80   LYS    >                        (  5.9 A from    O2B ADP A 450  )
         E  <A 124   GLU    > matches  <A 354   GLU    >                        ( 12.7 A from    O2' ADP A 450  )
 
KERBm  3*FOUND in 1a31  size =    3  ^    DNA (5'-                                                #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.1183 -0.8753 -0.4690  0.7570  0.3852 -0.5279 -0.6427  0.2925 -0.7081    21.369    -8.924    56.207              
         T  <A  34   THR    > matches  <A 411   THR    >                        ( 18.5 A from    O3P PTR A 723  )
         K  <A  60   LYS    > matches  <A 216   LYS    >                        ( 18.8 A from    CE2 PTR A 723  )
         E  <A 124   GLU    > matches  <A 418   GLU    >                        ( 19.8 A from    O2P PTR A 723  )
 
KERBm  3*FOUND in 2zyj  size =    3  ^    ALPHA-AMINODIPATE AMINOTRANSFERASE;                     #    2                            
  RMSD =     1.76 A
  TRANSFORM    0.3491 -0.8476  0.3995 -0.8547 -0.4628 -0.2350 -0.3841  0.2595  0.8861    25.104   -38.662   -11.584              
         T  <A  34   THR    > matches  <A  97   THR    >                        (  7.9 A from    O1P PGU A 500  )
         K  <A  60   LYS    > matches  <A 263   LYS    >                        ( 11.1 A from    O2P PGU A 500  )
         E  <A 124   GLU    > matches  <A 220   GLU    >                        ( 17.1 A from    C2A PGU A 500  )
 
KERBm  3*FOUND in 3d0j  size =    3  ^    UNCHARACTERIZED PROTEIN CA_C3497;                       #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.2399  0.6160  0.7504  0.9079 -0.1313  0.3980 -0.3437 -0.7768  0.5278    36.197   -28.720    24.383              
         T  <A  34   THR    > matches  <A 129   THR    >                        (  9.1 A from    O1  FMT A 138  )
         K  <A  60   LYS    > matches  <A 133   LYS    >                        ( -8.1 A from    O1  FMT A 138s )
         E  <A 124   GLU    > matches  <A  66   GLU    >                        ( 18.5 A from    O2  FMT A 138  )
 
KERBm  3*FOUND in 4ck4  size =    3  ^    BETA_LACTOGLOBULIN-1/B;                                 #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.6938 -0.6987  0.1743  0.7178  0.6518 -0.2448 -0.0574 -0.2950 -0.9538    14.069   -18.724    68.662              
         T  <A  34   THR    > matches  <A   6   THR    >                        (  9.9 A from    N   NH4 A1104  )
         K  <A  60   LYS    > matches  <A   8   LYS    >                        (-11.2 A from    N   NH4 A1106s )
         E  <A 124   GLU    > matches  <A 112   GLU    >                        ( 10.1 A from    N   NH4 A1102  )
 
KERBm  3*FOUND in 4aum  size =    3  ^    CATALASE-PHENOL OXIDASE;                                #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.7549 -0.5025  0.4215 -0.3858  0.8599  0.3342  0.5304 -0.0897  0.8430    48.204    31.162    -9.247              
         T  <A  34   THR    > matches  <A 114   THR    >                        ( 18.7 A from    O1A HDD A 900  )
         K  <A  60   LYS    > matches  <A 112   LYS    >                        ( 14.7 A from    C26 1PE A1698  )
         E  <A 124   GLU    > matches  <A  27   GLU    >                        ( 21.7 A from    O2A HDD A 900  )
 
KERBm  3*FOUND in 5xwi  size =    3  ^    ALKALINE PHOSPHATASE PHOK;                              #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.0050 -0.0195  0.9998 -0.3974 -0.9174 -0.0198 -0.9176  0.3975  0.0031    37.392     4.801    -6.252              
         T  <A  34   THR    > matches  <A 182   THR    >                        ( 19.3 A from    O   TPO A  89  )
         K  <A  60   LYS    > matches  <A 157   LYS    >                        ( 22.8 A from    O   TPO A  89  )
         E  <A 124   GLU    > matches  <A 130   GLU    >                        ( 17.0 A from    C   TPO A  89  )
 
KERBm  3*FOUND in 1sdd  size =    3  ^    COAGULATION FACTOR V;                                   #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.7096 -0.0650  0.7016 -0.3457 -0.8998  0.2663 -0.6140  0.4315  0.6609    -3.982    -1.349    -4.525              
         T  <A  34   THR    > matches  <A 104   THR    >                        (  5.7 A from   CA    CA A2184  )
         K  <A  60   LYS    > matches  <A  93   LYS    >                        ( -5.5 A from   CA    CA A2184s )
         E  <A 124   GLU    > matches  <B2128   GLU    >                        ( 23.1 A from   CA    CA A2184  )
 
KERBm  3*FOUND in 2vse  size =    3  ^    MOSQUITOCIDAL TOXIN;                                    #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.9658 -0.1979  0.1675  0.1247 -0.2118 -0.9693 -0.2273 -0.9571  0.1799   -58.661   154.525    85.488              
         T  <A  34   THR    > matches  <A 440   THR    >                        ( 69.5 A from    C5  MPD A1867  )
         K  <A  60   LYS    > matches  <A 337   LYS    >                        ( 73.1 A from    C5  MPD A1867  )
         E  <A 124   GLU    > matches  <A 172   GLU    >                        ( 53.2 A from    C5  MPD A1867  )
 
KERBm  3*FOUND in 3l3f  size =    3  ^    PROTEIN DOA1;                                           #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.1456  0.1293  0.9809 -0.6088 -0.7698  0.1918 -0.7798  0.6251  0.0333    22.929    44.759    19.331              
         T  <A  34   THR    > matches  <X 384   THR    > 
         K  <A  60   LYS    > matches  <X 377   LYS    > 
         E  <A 124   GLU    > matches  <X 514   GLU    > 
 
KERBm  3*FOUND in 2hi2  size =    3  ^    FIMBRIAL PROTEIN;                                       #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.5076 -0.0890  0.8570  0.8099 -0.3887  0.4393 -0.2940 -0.9171 -0.2693    31.794   -13.961    67.361              
         T  <A  34   THR    > matches  <A  89   THR    >                        ( 16.6 A from    N   OPE A 824  )
         K  <A  60   LYS    > matches  <A  84   LYS    >                        ( 12.1 A from    N   OPE A 824  )
         E  <A 124   GLU    > matches  <A 100   GLU    >                        ( 33.2 A from    N   OPE A 824  )
 
KERBm  3*FOUND in 1d2o  size =    3  ^    COLLAGEN ADHESIN;                                       #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.8051  0.3796  0.4558 -0.0661  0.7063 -0.7048  0.5895  0.5976  0.5435    22.153   -90.053   -40.142              
         T  <A  34   THR    > matches  <A 610   THR    > 
         K  <A  60   LYS    > matches  <A 621   LYS    > 
         E  <A 124   GLU    > matches  <A 652   GLU    > 
 
KERBm  3*FOUND in 3uem  size =    3  ^    PROTEIN DISULFIDE-ISOMERASE;                            #    1                            
  RMSD =     1.76 A
  TRANSFORM   -0.3485 -0.2647 -0.8992 -0.9261  0.2451  0.2868 -0.1445 -0.9327  0.3306    25.720     5.329    -8.323              
         T  <A  34   THR    > matches  <A 325   THR    >                        ( 12.5 A from    C1  D1D A2815  )
         K  <A  60   LYS    > matches  <A 436   LYS    >                        ( 14.4 A from    C1  D1D A2815  )
         E  <A 124   GLU    > matches  <A 332   GLU    >                        ( 21.0 A from    S1  D1D A2815  )
 
KERBm  3*FOUND in 4gf2  size =    3  ^    ERYTHROCYTE BINDING ANTIGEN 140;                        #    3                            
  RMSD =     1.76 A
  TRANSFORM   -0.1356  0.8649 -0.4832 -0.7752 -0.3963 -0.4919  0.6169 -0.3079 -0.7243   -33.812   -55.396    35.035              
         T  <A  34   THR    > matches  <A 479   THR    >                        ( 10.2 A from    H11 GOL A 808  )
         K  <A  60   LYS    > matches  <A 682   LYS    >                        ( 13.7 A from    H32 GOL A 815  )
         E  <A 124   GLU    > matches  <A 463   GLU    >                        ( 11.6 A from    HO1 GOL A 808  )
 
KERBm  3*FOUND in 5m2n  size =    3  ^    ELONGATOR COMPLEX PROTEIN 2;                            #    1                            
  RMSD =     1.76 A
  TRANSFORM    0.2754  0.9567  0.0945  0.5875 -0.0897 -0.8043  0.7609 -0.2770  0.5867   -89.184   202.681  -108.530              
         T  <A  34   THR    > matches  <A 653   THR    > 
         K  <A  60   LYS    > matches  <A 650   LYS    > 
         E  <A 124   GLU    > matches  <A 728   GLU    > 
 
KERBm  3*FOUND in 4tmv  size =    3  ^    EIF5B;                                                  #    2                            
  RMSD =     1.77 A
  TRANSFORM    0.3509  0.5149 -0.7821  0.4363 -0.8289 -0.3500  0.8286  0.2184  0.5155    -1.461   -55.837    37.275              
         T  <A  34   THR    > matches  <A 719   THR    >                        (  6.7 A from    O6  GSP A 901  )
         K  <A  60   LYS    > matches  <A 658   LYS    >                        ( 11.9 A from    N1  GSP A 901  )
         E  <A 124   GLU    > matches  <A 552   GLU    >                        (  4.0 A from   MG    MG A 902  )
 
KERBm  3*FOUND in 3l8w  size =    3  ^    URICASE;                                                #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.0613  0.9914 -0.1157  0.2900  0.0933  0.9525 -0.9551  0.0920  0.2818    -5.422   -55.184    28.367              
         T  <A  34   THR    > matches  <A 230   THR    >                        (  8.4 A from    O2  XAN A 300  )
         K  <A  60   LYS    > matches  <A 233   LYS    >                        ( 12.6 A from    O2  XAN A 300  )
         E  <A 124   GLU    > matches  <A 259   GLU    >                        ( 13.1 A from    HN9 XAN A 300  )
 
KERBm  3*FOUND in 2ckk  size =    3  ^    KIN17;                                                  #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.5224 -0.6025 -0.6034  0.3336 -0.5068  0.7949  0.7847  0.6166  0.0638     7.887   -13.220    -7.017              
         T  <A  34   THR    > matches  <A  25   THR    >                        (  5.4 A from    I   IOD A 275  )
         K  <A  60   LYS    > matches  <A  27   LYS    >                        (  4.3 A from    I   IOD A 275  )
         E  <A 124   GLU    > matches  <A  96   GLU    >                        ( 10.4 A from    I   IOD A 274  )
 
KERBm  3*FOUND in 3flo  size =    3  ^    DNA POLYMERASE ALPHA SUBUNIT B;                         #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.9457  0.1255  0.2997 -0.3204 -0.5132 -0.7962 -0.0539  0.8490 -0.5256   -14.610   203.806    42.941              
         T  <A  34   THR    > matches  <B1431   THR    >                        (  7.9 A from    O4  SO4 B  37  )
         K  <A  60   LYS    > matches  <B1402   LYS    >                        (  5.4 A from    O4  SO4 B  37  )
         E  <A 124   GLU    > matches  <A 463   GLU    >                        (  8.0 A from    O2  SO4 A  31  )
 
KERBm  3*FOUND in 2fuq  size =    3  ^    HEPARINASE II PROTEIN;                                  #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.7923 -0.4196  0.4430  0.0066 -0.7201 -0.6939 -0.6101 -0.5527  0.5677   -43.412    78.146    27.264              
         T  <A  34   THR    > matches  <A 430   THR    >                        ( 13.6 A from   ZN    ZN A   1  )
         K  <A  60   LYS    > matches  <A 640   LYS    >                        ( 17.1 A from   ZN    ZN A   1  )
         E  <A 124   GLU    > matches  <A 395   GLU    >                        (  8.4 A from   ZN    ZN A   1  )
 
KERBm  3*FOUND in 3dcy  size =    3  ^    REGULATOR PROTEIN;                                      #    3                            
  RMSD =     1.77 A
  TRANSFORM   -0.1632  0.9765 -0.1409  0.9528  0.1931  0.2345 -0.2561  0.0959  0.9619    -6.392   -27.193    20.431              
         T  <A  34   THR    > matches  <A 211   THR    >                        ( 21.0 A from    O2  PO4 A 271  )
         K  <A  60   LYS    > matches  <A 214   LYS    >                        ( 26.6 A from    O2  PO4 A 271  )
         E  <A 124   GLU    > matches  <A 123   GLU    >                        ( 11.7 A from    O3  PO4 A 271  )
 
KERBm  3*FOUND in 6fhn  size =    3  ^    PROTEIN;                                                #    2                            
  RMSD =     1.77 A
  TRANSFORM    0.3479 -0.9177 -0.1919  0.1206 -0.1592  0.9799  0.9297  0.3640 -0.0553    21.556     3.196   -81.990              
         T  <A  34   THR    > matches  <A 691   THR    >                        ( 14.1 A from   NA    NA A3013  )
         K  <A  60   LYS    > matches  <A 702   LYS    >                        ( 15.5 A from   NA    NA A3013  )
         E  <A 124   GLU    > matches  <A 251   GLU    >                        (  7.1 A from    C5  B3P A3003  )
 
KERBm  3*FOUND in 4pkf  size =    3  ^    TUTD;                                                   #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.7825 -0.4879  0.3869  0.1868  0.7766  0.6016  0.5940  0.3985 -0.6988    16.521    -6.375    49.944              
         T  <A  34   THR    > matches  <A 743   THR    >                        ( 25.0 A from   CL    CL A 902  )
         K  <A  60   LYS    > matches  <A 745   LYS    >                        ( 31.7 A from   CL    CL A 902  )
         E  <A 124   GLU    > matches  <A 522   GLU    >                        ( 18.1 A from   FE2  SF4 B 101  )
 
KERBm  3*FOUND in 3s28  size =    3  ^    SUCROSE SYNTHASE 1;                                     #    2                            
  RMSD =     1.77 A
  TRANSFORM   -0.0832  0.9921 -0.0935  0.0159 -0.0925 -0.9956  0.9964  0.0844  0.0081   140.672    32.132   149.471              
         T  <A  34   THR    > matches  <A 475   THR    >                        ( 15.4 A from    HO6BNHF A 904  )
         K  <A  60   LYS    > matches  <A 520   LYS    >                        ( 19.3 A from    HO6BNHF A 904  )
         E  <A 124   GLU    > matches  <A 394   GLU    >                        ( 21.9 A from    O1  SO4 A 911  )
 
KERBm  3*FOUND in 3pfo  size =    3  ^    PUTATIVE ACETYLORNITHINE DEACETYLASE;                   #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.1040  0.4608 -0.8814  0.0845  0.8871  0.4539 -0.9910  0.0272  0.1312    23.016   -18.144    49.483              
         T  <A  34   THR    > matches  <A 374   THR    >                        ( 11.3 A from    O2  EDO A 501  )
         K  <A  60   LYS    > matches  <A 273   LYS    >                        (  8.1 A from    O2  EDO A 501  )
         E  <A 124   GLU    > matches  <A 353   GLU    >                        ( -5.3 A from    O2  EDO A 500s )
 
KERBm  3*FOUND in 5dca  size =    3  ^    PRE-MRNA-SPLICING HELICASE BRR2;                        #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.1483  0.9748 -0.1665  0.5552  0.2214  0.8017 -0.8184 -0.0264  0.5740     2.684    25.428    47.612              
         T  <A  34   THR    > matches  <A 589   THR    > 
         K  <A  60   LYS    > matches  <A 564   LYS    > 
         E  <A 124   GLU    > matches  <A1114   GLU    > 
 
KERBm  3*FOUND in 1r5l  size =    3  ^    PROTEIN (ALPHA-TOCOPHEROL TRANSFER PROTEIN);            #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.6245 -0.7263 -0.2871 -0.7291 -0.6739  0.1189  0.2799 -0.1351  0.9505    66.314    35.075    23.891              
         T  <A  34   THR    > matches  <A 184   THR    >                        (  9.8 A from    C14 VIV A 301  )
         K  <A  60   LYS    > matches  <A 217   LYS    >                        ( 10.6 A from    O2  VIV A 301  )
         E  <A 124   GLU    > matches  <A  82   GLU    >                        ( 12.6 A from    C19 VIV A 301  )
 
KERBm  3*FOUND in 5fky  size =    3  ^    O-GLCNACASE BT_4395;                                    #    3                            
  RMSD =     1.77 A
  TRANSFORM    0.4063  0.6318 -0.6601 -0.5079  0.7567  0.4117 -0.7596 -0.1680 -0.6283    28.715     6.845    -6.645              
         T  <A  34   THR    > matches  <A 588   THR    >                        ( 26.0 A from    O1  GOL A1716  )
         K  <A  60   LYS    > matches  <A 532   LYS    >                        ( 30.5 A from    O1  GOL A1716  )
         E  <A 124   GLU    > matches  <A 448   GLU    >                        ( 29.5 A from    C6  2J4 A1717  )
 
KERBm  3*FOUND in 2vg3  size =    3  ^    UNDECAPRENYL PYROPHOSPHATE SYNTHETASE;                  #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.0774  0.3273  0.9417  0.8350  0.4948 -0.2406  0.5447 -0.8050  0.2350  -413.094    83.442   -67.180              
         T  <A  34   THR    > matches  <A 181   THR    >                        ( 17.4 A from    C9  GPP A1298  )
         K  <A  60   LYS    > matches  <A 151   LYS    >                        ( 22.9 A from    C9  GPP A1298  )
         E  <A 124   GLU    > matches  <A 200   GLU    >                        ( 16.2 A from    C4  GPP A1298  )
 
KERBm  3*FOUND in 6bs6  size =    3  ^    ALPHA-AMYLASE SUSG;                                     #    2                            
  RMSD =     1.77 A
  TRANSFORM    0.7560 -0.6510  0.0685  0.6260  0.7496  0.2150  0.1913  0.1197 -0.9742   114.241   -91.537   -10.593              
         T  <A  34   THR    > matches  <A 185   THR    >                        ( 20.1 A from   CA    CA A 719  )
         K  <A  60   LYS    > matches  <A 191   LYS    >                        ( 20.4 A from   CA    CA A 719  )
         E  <A 124   GLU    > matches  <A 312   GLU    >                        ( 17.4 A from    O2  GLC A 703  )
 
KERBm  3*FOUND in 6eqs  size =    3  ^    NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHON     #    2                            
  RMSD =     1.77 A
  TRANSFORM    0.2437  0.5022  0.8297 -0.9659  0.2033  0.1606  0.0881  0.8405 -0.5346    22.867    14.994    -9.730              
         T  <A  34   THR    > matches  <A 126   THR    >                        ( -2.9 A from    O   DMS A 411s )
         K  <A  60   LYS    > matches  <A 130   LYS    >                        (  7.2 A from    O   DMS A 411  )
         E  <A 124   GLU    > matches  <A 113   GLU    >                        ( 13.0 A from    C1  DMS A 411  )
 
KERBm  3*FOUND in 3kwu  size =    3  ^    MUNC13-1;                                               #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.5151 -0.3651  0.7755 -0.8210 -0.4701  0.3240 -0.2462  0.8036  0.5419     3.927    10.602   -11.851              
         T  <A  34   THR    > matches  <A 802   THR    >                        (  7.2 A from   CL    CL A 911  )
         K  <A  60   LYS    > matches  <A 804   LYS    >                        ( 10.8 A from   CL    CL A 911  )
         E  <A 124   GLU    > matches  <A 673   GLU    >                        ( -4.0 A from    O1 BGOL A 921s )
 
KERBm  3*FOUND in 5b73  size =    3  ^    PROTEIN KINASE C-BINDING PROTEIN 1;                     #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.5822 -0.6746 -0.4538  0.6962 -0.7019  0.1503  0.4199  0.2284 -0.8783    38.115   -11.553    16.995              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 18.6 A from   ZN    ZN A 503  )
         K  <A  60   LYS    > matches  <A 220   LYS    >                        ( 24.4 A from   ZN    ZN A 503  )
         E  <A 124   GLU    > matches  <A 207   GLU    >                        ( 22.3 A from   ZN    ZN A 502  )
 
KERBm  3*FOUND in 6fea  size =    3  ^    NITROGENASE PROTEIN ALPHA CHAIN;                        #    3                            
  RMSD =     1.77 A
  TRANSFORM   -0.8867  0.4571  0.0697  0.3126  0.7037 -0.6380  0.3407  0.5439  0.7668   112.130    25.538   -71.491              
         T  <A  34   THR    > matches  <A  28   THR    >                        (  7.9 A from   MG    MG C 201  )
         K  <A  60   LYS    > matches  <A  22   LYS    >                        (  5.2 A from   MG    MG C 201  )
         E  <A 124   GLU    > matches  <C  29   GLU    >                        ( 23.5 A from   MG    MG C 201  )
 
KERBm  3*FOUND in 5cxb  size =    3  ^    RIBOSOME BIOGENESIS PROTEIN YTM1;                       #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.4180  0.7164  0.5587  0.6719  0.6577 -0.3407  0.6115 -0.2330  0.7562   -69.315   -34.946   -48.374              
         T  <A  34   THR    > matches  <B 443   THR    >                        ( 20.9 A from   NA    NA A 504  )
         K  <A  60   LYS    > matches  <B 763   LYS    >                        ( 22.1 A from   NA    NA A 504  )
         E  <A 124   GLU    > matches  <A 478   GLU    >                        (  7.6 A from   CL    CL B 901  )
 
KERBm  3*FOUND in 5cec  size =    3  ^    BD3459;                                                 #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.8716 -0.4889  0.0362  0.1534 -0.2020  0.9673  0.4656 -0.8486 -0.2511     3.632    16.306    19.625              
         T  <A  34   THR    > matches  <A 358   THR    >                        ( -3.6 A from    O4  SO4 A 501s )
         K  <A  60   LYS    > matches  <A 365   LYS    >                        (  4.3 A from    O2  SO4 A 501  )
         E  <A 124   GLU    > matches  <A 152   GLU    >                        (  6.1 A from    O3  SO4 A 502  )
 
KERBm  3*FOUND in 3ua3  size =    3  ^    PROTEIN ARGININE N-METHYLTRANSFERASE 5;                 #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.2748  0.8167 -0.5073  0.7893  0.4930  0.3660 -0.5491  0.2998  0.7801    36.440   -40.497    -6.763              
         T  <A  34   THR    > matches  <A 612   THR    >                        ( 21.0 A from    N7  SAH A 743  )
         K  <A  60   LYS    > matches  <A 531   LYS    >                        ( 21.6 A from    O   SAH A 743  )
         E  <A 124   GLU    > matches  <A 705   GLU    >                        ( 24.0 A from    N6  SAH A 743  )
 
KERBm  3*FOUND in 4qpv  size =    3  ^    UNCHARACTERIZED PROTEIN;                                #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.0813 -0.3747 -0.9236 -0.9882  0.1509  0.0257 -0.1297 -0.9148  0.3826    61.096    21.122   133.695              
         T  <A  34   THR    > matches  <A 177   THR    > 
         K  <A  60   LYS    > matches  <A 171   LYS    > 
         E  <A 124   GLU    > matches  <A  42   GLU    > 
 
KERBm  3*FOUND in 3grf  size =    3  ^    ORNITHINE CARBAMOYLTRANSFERASE;                         #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.9988 -0.0472  0.0145 -0.0041  0.2133  0.9770  0.0492  0.9759 -0.2128    50.359    -7.207    29.297              
         T  <A  34   THR    > matches  <A 217   THR    >                        ( 39.8 A from   NI    NI A 328  )
         K  <A  60   LYS    > matches  <A 159   LYS    >                        ( 40.1 A from   NI    NI A 328  )
         E  <A 124   GLU    > matches  <A 203   GLU    >                        ( 36.4 A from   NI    NI A 328  )
 
KERBm  3*FOUND in 1tyo  size =    3  ^    ISOCITRATE DEHYDROGENASE;                               #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.9928  0.0082  0.1198 -0.1156 -0.2066  0.9716 -0.0327  0.9784  0.2041    86.136   308.525   -92.420              
         T  <A  34   THR    > matches  <A 240   THR    >                        ( 39.5 A from    O7  ENP A1001  )
         K  <A  60   LYS    > matches  <A 202   LYS    >                        ( 37.2 A from    O7  ENP A1001  )
         E  <A 124   GLU    > matches  <A 254   GLU    >                        ( 28.9 A from    O2  ENP A1001  )
 
KERBm  3*FOUND in 4zkq  size =    3  ^    PUTATIVE UNCHARACTERIZED PROTEIN;                       #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.3661 -0.8946 -0.2564  0.7398 -0.1126 -0.6633 -0.5645  0.4325 -0.7030    80.798    -9.290    30.071              
         T  <A  34   THR    > matches  <A 315   THR    >                        ( 38.4 A from    HO3 NAG A 502  )
         K  <A  60   LYS    > matches  <A 319   LYS    >                        ( 40.5 A from    HO3 NAG A 502  )
         E  <A 124   GLU    > matches  <A 384   GLU    >                        ( 37.6 A from    H61 NAG A 502  )
 
KERBm  3*FOUND in 2j0p  size =    3  ^    HEMIN TRANSPORT PROTEIN HEMS;                           #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.5911 -0.7152 -0.3729 -0.2290  0.5921 -0.7727 -0.7734  0.3713  0.5138    50.529    -8.560    17.497              
         T  <A  34   THR    > matches  <A 113   THR    >                        (  4.4 A from    C26 12P A1343  )
         K  <A  60   LYS    > matches  <A  45   LYS    >                        ( -2.7 A from    O34 12P A1343s )
         E  <A 124   GLU    > matches  <A  63   GLU    >                        ( 19.7 A from    C3  PEG A1345  )
 
KERBm  3*FOUND in 1dfa  size =    3  ^    PI-SCEI ENDONUCLEASE;                                   #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.2035  0.2641 -0.9428  0.9584  0.2507 -0.1366 -0.2003  0.9313  0.3041    51.361    -3.615    25.268              
         T  <A  34   THR    > matches  <A 435   THR    > 
         K  <A  60   LYS    > matches  <A  39   LYS    > 
         E  <A 124   GLU    > matches  <A 156   GLU    > 
 
KERBm  3*FOUND in 4hkm  size =    3  ^    ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE;                 #    1                            
  RMSD =     1.77 A
  TRANSFORM   -0.9274  0.3473  0.1392 -0.0507  0.2518 -0.9665  0.3707  0.9033  0.2159    -3.994     0.725   -59.481              
         T  <A  34   THR    > matches  <A  12   THR    >                        ( 11.8 A from    O3  GOL A 403  )
         K  <A  60   LYS    > matches  <A  50   LYS    >                        (  9.9 A from    O3  GOL A 403  )
         E  <A 124   GLU    > matches  <A  34   GLU    >                        ( 17.6 A from    O3  PO4 A 401  )
 
KERBm  3*FOUND in 3usz  size =    3  ^    EXO-1,3/1,4-BETA-GLUCANASE;                             #    2                            
  RMSD =     1.77 A
  TRANSFORM   -0.5392 -0.6370  0.5509 -0.8298  0.5137 -0.2181  0.1441  0.5747  0.8056    46.432   -18.187     3.859              
         T  <A  34   THR    > matches  <A 193   THR    >                        ( 27.4 A from   CA    CA A 901  )
         K  <A  60   LYS    > matches  <A 139   LYS    >                        ( 29.4 A from   CA    CA A 901  )
         E  <A 124   GLU    > matches  <A  22   GLU    >                        ( 21.7 A from   NA    NA A 902  )
 
KERBm  3*FOUND in 3d8b  size =    3  ^    FIDGETIN-LIKE PROTEIN 1;                                #    1                            
  RMSD =     1.77 A
  TRANSFORM    0.1306 -0.7089 -0.6931 -0.7339 -0.5391  0.4132  0.6666 -0.4547  0.5907    31.432   -55.800    50.188              
         T  <A  34   THR    > matches  <A 448   THR    >                        ( -3.8 A from    O3B ADP A 900s )
         K  <A  60   LYS    > matches  <A 452   LYS    >                        (  6.4 A from    O3' ADP A 900  )
         E  <A 124   GLU    > matches  <A 550   GLU    >                        ( 16.7 A from    O2B ADP A 900  )
 
KERBm  3*FOUND in 3dme  size =    3  ^    CONSERVED EXPORTED PROTEIN;                             #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.9307 -0.3038 -0.2036 -0.2052  0.8947 -0.3968 -0.3026  0.3275  0.8951    31.686   -42.840   -18.753              
         T  <A  34   THR    > matches  <A 144   THR    >                        (  8.9 A from    O1  TLA A 999  )
         K  <A  60   LYS    > matches  <A  90   LYS    >                        (  6.4 A from    O1  TLA A 999  )
         E  <A 124   GLU    > matches  <A 361   GLU    >                        ( 15.9 A from    O2  FAD A 500  )
 
KERBm  3*FOUND in 3cem  size =    3  ^    GLYCOGEN PHOSPHORYLASE, LIVER FORM;                     #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.1638 -0.3335  0.9284 -0.1147 -0.9283 -0.3537 -0.9798  0.1644 -0.1138   -79.065   128.687    39.285              
         T  <A  34   THR    > matches  <A 149   THR    >                        ( 17.9 A from    O4A PLP A 832  )
         K  <A  60   LYS    > matches  <A 513   LYS    >                        ( 20.2 A from   CL12 AVD A 833  )
         E  <A 124   GLU    > matches  <A 126   GLU    >                        ( 14.8 A from    C2A PLP A 832  )
 
KERBm  3*FOUND in 1vs3  size =    3  ^    TRNA PSEUDOURIDINE SYNTHASE A;                          #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.9908 -0.0424  0.1283 -0.1306  0.0589 -0.9897 -0.0344  0.9974  0.0639    16.785    14.563   -31.450              
         T  <A  34   THR    > matches  <A 204   THR    > 
         K  <A  60   LYS    > matches  <A 212   LYS    > 
         E  <A 124   GLU    > matches  <A 170   GLU    > 
 
KERBm  3*FOUND in 1gpm  size =    3  ^    GMP SYNTHETASE;                                         #    2                            
  RMSD =     1.78 A
  TRANSFORM   -0.5561 -0.3620 -0.7482  0.3966 -0.9067  0.1439  0.7304  0.2167 -0.6477   168.397   -13.605   -32.546              
         T  <A  34   THR    > matches  <A 521   THR    >                        ( -3.9 A from    O1  PO4 A 528s )
         K  <A  60   LYS    > matches  <A 517   LYS    >                        ( -2.6 A from    O1  PO4 A 528s )
         E  <A 124   GLU    > matches  <A 301   GLU    >                        ( 20.0 A from    O2  PO4 A 528  )
 
KERBm  3*FOUND in 4plo  size =    3  ^    NETRIN RECEPTOR DCC;                                    #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.6826  0.5797  0.4449 -0.0013  0.6098 -0.7926  0.7307 -0.5405 -0.4170    14.832   -41.409    12.588              
         T  <A  34   THR    > matches  <B 903   THR    > 
         K  <A  60   LYS    > matches  <B 859+  LYS    > 
         E  <A 124   GLU    > matches  <B 784   GLU    > 
 
KERBm  3*FOUND in 3a04  size =    3  ^    TRYPTOPHANYL-TRNA SYNTHETASE;                           #    3                            
  RMSD =     1.78 A
  TRANSFORM   -0.7504  0.5017 -0.4304 -0.0004  0.6508  0.7592 -0.6610 -0.5699  0.4882    14.228    24.167    -7.730              
         T  <A  34   THR    > matches  <A 361   THR    >                        ( 29.2 A from   CD    CD A 374  )
         K  <A  60   LYS    > matches  <A 365   LYS    >                        ( 33.6 A from   CD    CD A 374  )
         E  <A 124   GLU    > matches  <A 351   GLU    >                        ( 13.4 A from   CD    CD A 374  )
 
KERBm  3*FOUND in 5b68  size =    3  ^    4-ALPHA-GLUCANOTRANSFERASE;                             #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.7402 -0.5155 -0.4317 -0.5779  0.1596  0.8003  0.3436 -0.8419  0.4160    30.356   -21.917    40.492              
         T  <A  34   THR    > matches  <A 636   THR    >                        ( 21.9 A from    O4  SO4 A 807  )
         K  <A  60   LYS    > matches  <A 640   LYS    >                        ( 16.4 A from    O4  SO4 A 807  )
         E  <A 124   GLU    > matches  <A 570   GLU    >                        ( 24.1 A from    O8  BTB A 801  )
 
KERBm  3*FOUND in 2zxd  size =    3  ^    ALPHA-L-FUCOSIDASE, PUTATIVE;                           #    2                            
  RMSD =     1.78 A
  TRANSFORM    0.9782 -0.1935  0.0755  0.0851  0.7047  0.7044  0.1895  0.6826 -0.7058    24.071   -43.283    -0.722              
         T  <A  34   THR    > matches  <A 332   THR    >                        ( 21.2 A from    OAE ZXD A 901  )
         K  <A  60   LYS    > matches  <A 104   LYS    >                        ( 25.7 A from    OAD ZXD A 901  )
         E  <A 124   GLU    > matches  <A 299   GLU    >                        ( 21.7 A from    OAD ZXD A 901  )
 
KERBm  3*FOUND in 1vli  size =    3  ^    SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSE     #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.4165  0.2507  0.8739 -0.8394 -0.4753 -0.2637 -0.3492  0.8434 -0.4084   -60.920    23.488    33.938              
         T  <A  34   THR    > matches  <A 108   THR    >                        (  9.0 A from   ZN    ZN A 374  )
         K  <A  60   LYS    > matches  <A  50   LYS    >                        (  6.0 A from   ZN    ZN A 374  )
         E  <A 124   GLU    > matches  <A 163   GLU    >                        ( 24.0 A from   ZN    ZN A 374  )
 
KERBm  3*FOUND in 3ebl  size =    3  ^    GIBBERELLIN RECEPTOR GID1;                              #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.5351  0.1871 -0.8238 -0.1651  0.9332  0.3192 -0.8285 -0.3068  0.4685    43.394   -34.905    40.626              
         T  <A  34   THR    > matches  <A 171   THR    >                        ( 22.6 A from    O71 GA4 A 401  )
         K  <A  60   LYS    > matches  <A 174   LYS    >                        ( 26.1 A from    O71 GA4 A 401  )
         E  <A 124   GLU    > matches  <A 159   GLU    >                        ( 14.1 A from    O3  NO3 A 601  )
 
KERBm  3*FOUND in 3c1m  size =    3  ^    PROBABLE ASPARTOKINASE;                                 #    2                            
  RMSD =     1.78 A
  TRANSFORM   -0.6311  0.0840 -0.7711  0.1560 -0.9601 -0.2322  0.7598  0.2668 -0.5928    99.584    31.145    22.256              
         T  <A  34   THR    > matches  <A  26   THR    >                        ( 14.0 A from    O2  FMT A 474  )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        ( 15.7 A from    O1  FMT A 473  )
         E  <A 124   GLU    > matches  <A  82   GLU    >                        ( -8.2 A from    O2  FMT A 474s )
 
KERBm  3*FOUND in 2py5  size =    3  ^    5'-D(GGACTTT)-3';                                       #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.4181 -0.5385 -0.7316  0.8794  0.0381  0.4746  0.2277  0.8418 -0.4895    39.034   -45.922    33.350              
         T  <A  34   THR    > matches  <A 231   THR    >                        (  7.4 A from    C1  EDO A9010  )
         K  <A  60   LYS    > matches  <A 498   LYS    >                        (  5.6 A from    O1  EDO A9010  )
         E  <A 124   GLU    > matches  <A 338   GLU    >                        ( -3.2 A from    O1  EDO A9013s )
 
KERBm  3*FOUND in 4jxe  size =    3  ^    AMSH-LIKE PROTEASE SST2;                                #    2                            
  RMSD =     1.78 A
  TRANSFORM   -0.8960  0.3873 -0.2170 -0.4288 -0.8818  0.1965  0.1152 -0.2691 -0.9562    32.474    -1.860    51.333              
         T  <A  34   THR    > matches  <A 345   THR    >                        ( 11.6 A from   ZN    ZN A 501  )
         K  <A  60   LYS    > matches  <A 377   LYS    >                        ( 14.2 A from   ZN    ZN A 501  )
         E  <A 124   GLU    > matches  <A 311   GLU    >                        ( 11.5 A from    O2  EDO A 503  )
 
KERBm  3*FOUND in 2oem  size =    3  ^    2,3-DIKETO-5-METHYLTHIOPENTYL-1-PHOSPHATE ENOLASE;      #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.0212 -0.9784 -0.2055  0.7536 -0.1507  0.6398  0.6570  0.1413 -0.7406   -25.847    23.811     7.697              
         T  <A  34   THR    > matches  <A 208   THR    >                        (  8.5 A from    N   KCX A 173  )
         K  <A  60   LYS    > matches  <A 206   LYS    >                        ( 13.0 A from    N   KCX A 173  )
         E  <A 124   GLU    > matches  <A 176   GLU    >                        (  2.6 A from   MG    MG A 911s )
 
KERBm  3*FOUND in 3oqq  size =    3  ^    PUTATIVE LIPOPROTEIN;                                   #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.3228  0.9407  0.1038 -0.1457 -0.0589  0.9876 -0.9352  0.3340 -0.1181    19.298   -21.076    44.035              
         T  <A  34   THR    > matches  <A 230   THR    >                        ( 19.2 A from    C4  PGE A 462  )
         K  <A  60   LYS    > matches  <A 247   LYS    >                        ( 22.5 A from    C4  PGE A 462  )
         E  <A 124   GLU    > matches  <A 181   GLU    >                        ( 14.5 A from   CA    CA A 460  )
 
KERBm  3*FOUND in 5b1a  size =    3  ^    CYTOCHROME C OXIDASE SUBUNIT 1;                         #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.7013  0.5191  0.4885 -0.7129 -0.5094 -0.4820  0.0014  0.6863 -0.7273  -190.317   296.570   -25.782              
         T  <A  34   THR    > matches  <A 181   THR    >                        ( 13.3 A from    O25 CHD B 303  )
         K  <A  60   LYS    > matches  <A 172   LYS    >                        ( 15.9 A from    O26 CHD B 303  )
         E  <A 124   GLU    > matches  <B  62   GLU    >                        ( -3.7 A from    O7  CHD B 303s )
 
KERBm  3*FOUND in 4ecn  size =    3  ^    LEUCINE-RICH REPEAT PROTEIN;                            #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.1690 -0.6631  0.7292 -0.1407  0.7160  0.6837  0.9755  0.2182 -0.0278   -63.395   -69.438    24.864              
         T  <A  34   THR    > matches  <A 779   THR    >                        ( 21.2 A from   CL    CL A1002  )
         K  <A  60   LYS    > matches  <A 746   LYS    >                        ( 21.4 A from   CL    CL A1002  )
         E  <A 124   GLU    > matches  <A 441   GLU    >                        ( 33.7 A from   CL    CL A1002  )
 
KERBm  3*FOUND in 3a9s  size =    3  ^    D-ARABINOSE ISOMERASE;                                  #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.2328 -0.6484  0.7248  0.8882 -0.4453 -0.1131 -0.3961 -0.6174 -0.6796    58.987     7.236    30.001              
         T  <A  34   THR    > matches  <A 410   THR    >                        ( 18.5 A from    C3  GOL A 901  )
         K  <A  60   LYS    > matches  <A 418   LYS    >                        ( 13.9 A from    C3  GOL A 901  )
         E  <A 124   GLU    > matches  <A 489   GLU    >                        ( 10.3 A from   MN    MN A 801  )
 
KERBm  3*FOUND in 3wjm  size =    3  ^    ARYLPHORIN;                                             #    2                            
  RMSD =     1.78 A
  TRANSFORM   -0.2693  0.8538 -0.4457  0.2912 -0.3689 -0.8827  0.9180  0.3674  0.1492    15.234    51.881    15.752              
         T  <A  34   THR    > matches  <A 557   THR    >                        ( 46.3 A from    C1  NAG A 801  )
         K  <A  60   LYS    > matches  <A 559   LYS    >                        ( 47.8 A from    C1  NAG A 801  )
         E  <A 124   GLU    > matches  <A 263   GLU    >                        ( 44.2 A from    C1  NAG A 801  )
 
KERBm  3*FOUND in 5jgy  size =    3  ^    ALDOSE REDUCTASE, AKR4C13;                              #    2                            
  RMSD =     1.78 A
  TRANSFORM   -0.4365 -0.8489  0.2982  0.3748 -0.4729 -0.7974 -0.8179  0.2363 -0.5246    45.587    19.149    52.444              
         T  <A  34   THR    > matches  <A  55   THR    >                        (  6.8 A from   NO9 A6KB A 401  )
         K  <A  60   LYS    > matches  <A  87   LYS    >                        ( -3.8 A from   SC2 B6KB A 401s )
         E  <A 124   GLU    > matches  <A  74   GLU    >                        ( 18.5 A from    C1  EDO A 403  )
 
KERBm  3*FOUND in 5w1a  size =    3  ^    MYOSIN HEAVY CHAIN, MUSCLE;                             #    4                            
  RMSD =     1.78 A
  TRANSFORM   -0.8710  0.0041 -0.4913 -0.4320 -0.4827  0.7618  0.2341 -0.8758 -0.4222   134.455    26.755    95.750              
         T  <A  34   THR    > matches  <A 186   THR    >                        ( -3.7 A from    OA2 FLC A2000s )
         K  <A  60   LYS    > matches  <A 190   LYS    >                        (  7.2 A from    OA1 FLC A2000  )
         E  <A 124   GLU    > matches  <A 465   GLU    >                        ( 12.1 A from    O3  GOL A2001  )
 
KERBm  3*FOUND in 6aqk  size =    3  ^    TOXIN PROTEIN;                                          #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.1360 -0.5522 -0.8226 -0.0287 -0.8321  0.5538  0.9903  0.0517  0.1290    42.681    -9.657   -18.944              
         T  <A  34   THR    > matches  <A 842   THR    >                        (  8.6 A from   CL    CL A1008  )
         K  <A  60   LYS    > matches  <A 894   LYS    >                        ( 10.1 A from   CL    CL A1008  )
         E  <A 124   GLU    > matches  <A 795   GLU    >                        (-13.9 A from   CL    CL A1009s )
 
KERBm  3*FOUND in 1xdp  size =    3  ^    POLYPHOSPHATE KINASE;                                   #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.3717  0.5416  0.7540 -0.6877  0.3850 -0.6155  0.6236  0.7473 -0.2293    16.248    41.999   114.064              
         T  <A  34   THR    > matches  <A 397   THR    >                        ( 20.9 A from    O3G ATP A 701  )
         K  <A  60   LYS    > matches  <A 395   LYS    >                        ( 25.9 A from    O3G ATP A 701  )
         E  <A 124   GLU    > matches  <A 623   GLU    >                        (  6.3 A from    O2G ATP A 701  )
 
KERBm  3*FOUND in 4lms  size =    3  ^    CRYPTOPHYTE PHYCOCYANIN (ALPHA-1 CHAIN);                #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.6689  0.7432  0.0149  0.4068 -0.3493 -0.8441  0.6221 -0.5707  0.5360    14.766    16.454     5.096              
         T  <A  34   THR    > matches  <A  52   THR    >                        ( 22.1 A from    CAB M1V A 101  )
         K  <A  60   LYS    > matches  <A  55   LYS    >                        ( 23.1 A from    CAB M1V A 101  )
         E  <A 124   GLU    > matches  <A  11   GLU    >                        (  5.8 A from    O2C M1V A 101  )
 
KERBm  3*FOUND in 2avn  size =    3  ^    UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFERA     #    2                            
  RMSD =     1.78 A
  TRANSFORM    0.2443 -0.0741  0.9669  0.1462 -0.9829 -0.1123 -0.9586 -0.1688  0.2293    -1.222    10.490    69.170              
         T  <A  34   THR    > matches  <A  53   THR    >                        (  5.9 A from    OXT SAI A1300  )
         K  <A  60   LYS    > matches  <A  83   LYS    >                        (  7.4 A from    OXT SAI A1300  )
         E  <A 124   GLU    > matches  <A 117   GLU    >                        (  6.5 A from    N6  SAI A1300  )
 
KERBm  3*FOUND in 3uaq  size =    3  ^    LBPB B-LOBE;                                            #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.5374  0.0245 -0.8430 -0.5900 -0.7033 -0.3966  0.6025 -0.7105  0.3635    38.828    -4.500    -8.242              
         T  <A  34   THR    > matches  <A 181   THR    > 
         K  <A  60   LYS    > matches  <A  63   LYS    > 
         E  <A 124   GLU    > matches  <A 297   GLU    > 
 
KERBm  3*FOUND in 2o8b  size =    3  ^    5'-D(*GP*AP*AP*CP*CP*GP*CP*GP*CP*GP*CP*TP*AP*GP*G)-     #    2                            
  RMSD =     1.78 A
  TRANSFORM   -0.0539 -0.5061 -0.8608  0.9226 -0.3550  0.1510  0.3820  0.7860 -0.4861    59.572    76.353    20.784              
         T  <A  34   THR    > matches  <B 924   THR    >                        ( 59.8 A from    O3' ADP B 202  )
         K  <A  60   LYS    > matches  <B 920   LYS    >                        ( 64.6 A from    O3' ADP B 202  )
         E  <A 124   GLU    > matches  <B 463   GLU    >                        ( 54.3 A from    O3' ADP B 202  )
 
KERBm  3*FOUND in 4naw  size =    3  ^    UBIQUITIN-LIKE PROTEIN ATG12;                           #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.7472 -0.4864 -0.4528 -0.3158  0.3396 -0.8860 -0.5848 -0.8050 -0.1002    37.892    15.901    23.649              
         T  <A  34   THR    > matches  <A 118   THR    >                        ( 19.3 A from    O4  SO4 B 301  )
         K  <A  60   LYS    > matches  <B 201   LYS    >                        ( 18.3 A from    O4  SO4 B 301  )
         E  <A 124   GLU    > matches  <D 161   GLU    >                        ( 34.4 A from    O4  SO4 B 301  )
 
KERBm  3*FOUND in 5xea  size =    3  ^    ENVELOPE GLYCOPROTEIN;                                  #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.5974 -0.0626  0.7995  0.7988 -0.0422 -0.6001 -0.0713 -0.9971 -0.0248   -47.969     0.692    17.800              
         T  <A  34   THR    > matches  <A 251   THR    >                        ( 15.7 A from    C1  NAG A 503  )
         K  <A  60   LYS    > matches  <A 238   LYS    >                        ( 22.0 A from    O5  NAG A 503  )
         E  <A 124   GLU    > matches  <A 190   GLU    >                        ( 10.0 A from    C8  NAG A 502  )
 
KERBm  3*FOUND in 6g21  size =    3  ^    PROBABLE FERULOYL ESTERASE B-2;                         #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.4115  0.0246 -0.9111 -0.0540 -0.9985 -0.0025  0.9098 -0.0482 -0.4123    52.175    32.634    26.321              
         T  <A  34   THR    > matches  <A 463   THR    >                        ( 17.7 A from   CA    CA A 611  )
         K  <A  60   LYS    > matches  <A 482   LYS    >                        ( 17.4 A from   CA    CA A 611  )
         E  <A 124   GLU    > matches  <A 406   GLU    >                        ( 20.7 A from    C5  FER A 608  )
 
KERBm  3*FOUND in 5oiu  size =    3  ^    TYPE IV PILUS ASSEMBLY PROTEIN PILF;                    #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.6476  0.7210  0.2464 -0.0173 -0.3094  0.9508 -0.7617  0.6200  0.1879  -114.830   -47.327    78.531              
         T  <A  34   THR    > matches  <A 161   THR    >                        ( -4.0 A from    O1G ATP A 501s )
         K  <A  60   LYS    > matches  <A 165   LYS    >                        ( -3.2 A from    O1B ATP A 501s )
         E  <A 124   GLU    > matches  <A  40   GLU    >                        ( 14.4 A from   CL    CL A 505  )
 
KERBm  3*FOUND in 3sbt  size =    3  ^    PRE-MRNA-SPLICING FACTOR 8;                             #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.6624 -0.0091 -0.7491 -0.0430  0.9987  0.0258 -0.7479 -0.0493  0.6620    24.254    -6.259    46.645              
         T  <A  34   THR    > matches  <A1861   THR    >                        ( 10.8 A from    O3  SO4 A   1  )
         K  <A  60   LYS    > matches  <A1873   LYS    >                        ( 11.9 A from    O3  SO4 A   1  )
         E  <A 124   GLU    > matches  <A2020   GLU    >                        ( 13.4 A from    C3  PGO A2093  )
 
KERBm  3*FOUND in 1ici  size =    3  ^    TRANSCRIPTIONAL REGULATORY PROTEIN, SIR2 FAMILY;        #    1                            
  RMSD =     1.78 A
  TRANSFORM   -0.8985 -0.2343 -0.3711 -0.2594 -0.3986  0.8797  0.3540 -0.8867 -0.2974    40.654   -41.859    14.040              
         T  <A  34   THR    > matches  <A   8   THR    >                        ( 19.8 A from    C2A NAD A1001  )
         K  <A  60   LYS    > matches  <A   4   LYS    >                        ( 22.2 A from    C2A NAD A1001  )
         E  <A 124   GLU    > matches  <A 174   GLU    >                        ( 19.5 A from    O3D NAD A1001  )
 
KERBm  3*FOUND in 2ihb  size =    3  ^    GUANINE NUCLEOTIDE-BINDING PROTEIN G(K) SUBUNIT ALP     #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.9520 -0.2837  0.1148 -0.2510 -0.9384 -0.2374 -0.1751 -0.1972  0.9646    19.960   -14.012    33.423              
         T  <A  34   THR    > matches  <B  27   THR    > 
         K  <A  60   LYS    > matches  <B  24+  LYS    > 
         E  <A 124   GLU    > matches  <B  54   GLU    > 
 
KERBm  3*FOUND in 1q16  size =    3  ^    RESPIRATORY NITRATE REDUCTASE 1 ALPHA CHAIN;            #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.9058 -0.4198 -0.0580  0.0709  0.2852 -0.9558 -0.4178 -0.8617 -0.2881   106.551    -7.772  -116.523              
         T  <A  34   THR    > matches  <A1011   THR    >                        ( 21.0 A from   MO   6MO A1302  )
         K  <A  60   LYS    > matches  <A 914   LYS    >                        ( 21.6 A from   MO   6MO A1302  )
         E  <A 124   GLU    > matches  <A 953   GLU    >                        ( 19.9 A from    O6  MD1 A1300  )
 
KERBm  3*FOUND in 2xap  size =    3  ^    RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT          #    1                            
  RMSD =     1.78 A
  TRANSFORM    0.1959 -0.4654  0.8632 -0.2196  0.8370  0.5011  0.9557  0.2877 -0.0617    34.178   -85.081    -5.338              
         T  <A  34   THR    > matches  <A 572   THR    >                        ( 26.5 A from    N   NIY A 731  )
         K  <A  60   LYS    > matches  <A 575   LYS    >                        ( 31.9 A from    N   NIY A 731  )
         E  <A 124   GLU    > matches  <A 441   GLU    >                        (  9.5 A from    O2  NIY A 731  )
 
KERBm  3*FOUND in 4nfu  size =    3  ^    EDS1;                                                   #    1                            
  RMSD =     1.79 A
  TRANSFORM   -0.7688  0.6092 -0.1948  0.6262  0.7788 -0.0359 -0.1298  0.1496  0.9802    99.307   -72.851    -5.038              
         T  <A  34   THR    > matches  <B  66   THR    >                        ( 35.2 A from    O2  IPA A 703  )
         K  <A  60   LYS    > matches  <B 138   LYS    >                        ( 34.3 A from    O2  IPA A 703  )
         E  <A 124   GLU    > matches  <B  56   GLU    >                        ( 52.1 A from    O2  IPA A 703  )
 
KERBm  3*FOUND in 1vj1  size =    3  ^    PUTATIVE NADPH-DEPENDENT OXIDOREDUCTASE;                #    2                            
  RMSD =     1.79 A
  TRANSFORM    0.0286 -0.7224 -0.6909  0.0075  0.6913 -0.7226 -0.9996 -0.0155 -0.0251    83.722   -34.602    29.715              
         T  <A  34   THR    > matches  <A 317   THR    > 
         K  <A  60   LYS    > matches  <A 315   LYS    > 
         E  <A 124   GLU    > matches  <A  21   GLU    > 
 
KERBm  3*FOUND in 1y14  size =    3  ^    DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE;      #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.3263  0.5694 -0.7546  0.9423 -0.1327  0.3074 -0.0749  0.8113  0.5798    30.535   -28.403    16.798              
         T  <A  34   THR    > matches  <B 138   THR    >                        (  0.8 A from    CB  THR B 138  )
         K  <A  60   LYS    > matches  <B 129+  LYS    >                        (  0.0 A from    C   SER B 129  )
         E  <A 124   GLU    > matches  <A 120   GLU    >                        (  0.6 A from    CD  GLU A 120  )
 
KERBm  3*FOUND in 4rkn  size =    3  ^    MCCA;                                                   #    2                            
  RMSD =     1.79 A
  TRANSFORM    0.0833 -0.8167  0.5710  0.5661 -0.4328 -0.7016 -0.8201 -0.3817 -0.4263   -66.562    23.621   130.974              
         T  <A  34   THR    > matches  <A 463   THR    >                        (  5.2 A from    CBB HEM A 908  )
         K  <A  60   LYS    > matches  <A 467   LYS    >                        (  9.9 A from    CMC HEM A 907  )
         E  <A 124   GLU    > matches  <A 574   GLU    >                        ( 10.2 A from    CBC HEM A 909  )
 
KERBm  3*FOUND in 2dc0  size =    3  ^    PROBABLE AMIDASE;                                       #    4                            
  RMSD =     1.79 A
  TRANSFORM    0.8188  0.1387 -0.5571  0.1270 -0.9901 -0.0598  0.5599  0.0218  0.8283    42.861    21.850   -33.834              
         T  <A  34   THR    > matches  <A 395   THR    > 
         K  <A  60   LYS    > matches  <A 185   LYS    > 
         E  <A 124   GLU    > matches  <A 273   GLU    > 
 
KERBm  3*FOUND in 6dip  size =    3  ^    NOCTURNIN;                                              #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.9616 -0.0954 -0.2574 -0.1608 -0.9558 -0.2463  0.2225 -0.2783  0.9344    52.614    -5.574    34.583              
         T  <A  34   THR    > matches  <A 330   THR    >                        ( 19.6 A from   MG    MG A 501  )
         K  <A  60   LYS    > matches  <A 335   LYS    >                        ( 23.4 A from   MG    MG A 501  )
         E  <A 124   GLU    > matches  <A 371   GLU    >                        ( 16.7 A from   MG    MG A 501  )
 
KERBm  3*FOUND in 5xj1  size =    3  ^    UNCHARACTERIZED RNA METHYLTRANSFERASE SP_1029;          #    2                            
  RMSD =     1.79 A
  TRANSFORM   -0.8217  0.5635 -0.0853  0.3721  0.6437  0.6687 -0.4317 -0.5178  0.7386    30.096     9.897    12.687              
         T  <A  34   THR    > matches  <A  96   THR    >                        ( 18.1 A from    O2S EPE A 504  )
         K  <A  60   LYS    > matches  <A 100   LYS    >                        ( 22.7 A from    O1S EPE A 504  )
         E  <A 124   GLU    > matches  <A 287   GLU    >                        ( 16.4 A from    O4  P6G A 503  )
 
KERBm  3*FOUND in 4i6y  size =    3  ^    3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE;        #    1                            
  RMSD =     1.79 A
  TRANSFORM   -0.2481 -0.9489 -0.1952 -0.6262  0.3108 -0.7150 -0.7392  0.0551  0.6713   194.223   110.928   -14.018              
         T  <A  34   THR    > matches  <A 192   THR    >                        (  8.3 A from    O3  SO4 A 504  )
         K  <A  60   LYS    > matches  <A 145   LYS    >                        ( 12.8 A from    O3  SO4 A 504  )
         E  <A 124   GLU    > matches  <A  52   GLU    >                        ( 15.0 A from    O2  SO4 A 504  )
 
KERBm  3*FOUND in 3d34  size =    3  ^    SPONDIN-2;                                              #    1                            
  RMSD =     1.79 A
  TRANSFORM   -0.2188  0.9501  0.2225  0.7204  0.0034  0.6936 -0.6582 -0.3120  0.6852    -8.618   -84.077     6.253              
         T  <A  34   THR    > matches  <A  22   THR    >                        ( 22.3 A from   NI    NI A 225  )
         K  <A  60   LYS    > matches  <A  24   LYS    >                        ( 26.0 A from   CA    CA A 228  )
         E  <A 124   GLU    > matches  <A 152   GLU    >                        ( 17.8 A from   NI    NI A 226  )
 
KERBm  3*FOUND in 5xf9  size =    3  ^    NAD-REDUCING HYDROGENASE;                               #    3                            
  RMSD =     1.79 A
  TRANSFORM    0.9356 -0.3310 -0.1230 -0.3324 -0.7082 -0.6229 -0.1191 -0.6236  0.7726    60.723   -16.366    63.532              
         T  <A  34   THR    > matches  <C  46   THR    >                        ( 24.7 A from    S2  SF4 C 201  )
         K  <A  60   LYS    > matches  <C  13   LYS    >                        ( 27.8 A from   FE4  SF4 C 201  )
         E  <A 124   GLU    > matches  <D 453   GLU    >                        ( 17.6 A from   NI   3NI D 502  )
 
KERBm  3*FOUND in 3t69  size =    3  ^    PUTATIVE 2-DEHYDRO-3-DEOXYGALACTONOKINASE;              #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.9033  0.1898 -0.3848 -0.2775  0.9425 -0.1865 -0.3273 -0.2752 -0.9040   -22.382   -37.863   -14.384              
         T  <A  34   THR    > matches  <A  41   THR    >                        ( 12.2 A from    O2  SO4 A 332  )
         K  <A  60   LYS    > matches  <A  45   LYS    >                        ( 18.0 A from    O3  SO4 A 332  )
         E  <A 124   GLU    > matches  <A 129   GLU    >                        ( 10.2 A from    O2  SO4 A 332  )
 
KERBm  3*FOUND in 5txi  size =    3  ^    PENICILLIN BINDING PROTEIN 4;                           #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.3455  0.2478 -0.9051  0.6655  0.6153  0.4225 -0.6616  0.7483 -0.0477    58.740     5.936    94.763              
         T  <A  34   THR    > matches  <A 111   THR    >                        ( 14.7 A from    OAX RB6 A 401  )
         K  <A  60   LYS    > matches  <A 119   LYS    >                        ( 15.1 A from    SAS RB6 A 401  )
         E  <A 124   GLU    > matches  <A 199   GLU    >                        ( 10.1 A from    NAZ RB6 A 401  )
 
KERBm  3*FOUND in 3kas  size =    3  ^    TRANSFERRIN RECEPTOR PROTEIN 1;                         #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.1525  0.3820 -0.9115  0.4029 -0.8662 -0.2956  0.9025  0.3221  0.2860    31.094    53.802    29.830              
         T  <A  34   THR    > matches  <A 376   THR    >                        ( 19.7 A from    C8  NAG A1001  )
         K  <A  60   LYS    > matches  <A 374   LYS    >                        ( 17.8 A from    C8  NAG A1001  )
         E  <A 124   GLU    > matches  <A 156   GLU    >                        ( 24.3 A from    O2  PO4 A   4  )
 
KERBm  3*FOUND in 5f0j  size =    3  ^    VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35;         #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.5780 -0.8065  0.1244 -0.0740  0.1000  0.9922  0.8126  0.5828  0.0019     3.111     7.826    15.951              
         T  <A  34   THR    > matches  <A 399   THR    >                        ( 13.5 A from    O1  EDO A 509  )
         K  <A  60   LYS    > matches  <A 403   LYS    >                        ( 14.6 A from    C2  EDO A 509  )
         E  <A 124   GLU    > matches  <A 386   GLU    >                        ( 24.2 A from    O1  EDO A 507  )
 
KERBm  3*FOUND in 1y2m  size =    3  ^    PHENYLALANINE AMMONIA-LYASE;                            #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.6773 -0.7226  0.1380 -0.6298 -0.6665 -0.3989 -0.3802 -0.1833  0.9065    58.713    52.435    42.122              
         T  <A  34   THR    > matches  <A 438   THR    > 
         K  <A  60   LYS    > matches  <A 434   LYS    > 
         E  <A 124   GLU    > matches  <A 586   GLU    > 
 
KERBm  3*FOUND in 2x5f  size =    3  ^    ASPARTATE_TYROSINE_PHENYLALANINE PYRIDOXAL-5'           #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.3830 -0.9234 -0.0268 -0.8897 -0.3765  0.2581  0.2484  0.0750  0.9658    69.187    24.292     2.703              
         T  <A  34   THR    > matches  <A 285   THR    >                        ( -3.7 A from    O2S EPE A1430s )
         K  <A  60   LYS    > matches  <A 291   LYS    >                        (  7.8 A from    O3S EPE A1430  )
         E  <A 124   GLU    > matches  <A 214   GLU    >                        ( 16.3 A from    O1S EPE A1430  )
 
KERBm  3*FOUND in 5dmy  size =    3  ^    BETA-GALACTOSIDASE;                                     #    2                            
  RMSD =     1.79 A
  TRANSFORM    0.2726 -0.9619 -0.0219 -0.5798 -0.1824  0.7941  0.7678  0.2038  0.6074    25.639   -11.919    -1.838              
         T  <A  34   THR    > matches  <A 795   THR    >                        ( 13.0 A from    C2  EDO A 906  )
         K  <A  60   LYS    > matches  <A 770   LYS    >                        ( 18.0 A from    C2  EDO A 906  )
         E  <A 124   GLU    > matches  <A 757   GLU    >                        (  9.9 A from   MG    MG A 901  )
 
KERBm  3*FOUND in 1ulv  size =    3  ^    GLUCODEXTRANASE;                                        #    3                            
  RMSD =     1.79 A
  TRANSFORM    0.8437 -0.3014  0.4442 -0.3405  0.3393  0.8769  0.4150  0.8911 -0.1837   -14.333   -17.322   -12.540              
         T  <A  34   THR    > matches  <A 310   THR    >                        (  9.2 A from    O6A ACR A3000  )
         K  <A  60   LYS    > matches  <A  20   LYS    >                        ( 14.7 A from   CA    CA A2003  )
         E  <A 124   GLU    > matches  <A 387   GLU    >                        (  5.8 A from    O4A ACR A3000  )
 
KERBm  3*FOUND in 4zf7  size =    3  ^    INTERLEUKIN 2;                                          #    1                            
  RMSD =     1.79 A
  TRANSFORM   -0.9162  0.3817  0.1222 -0.3718 -0.6956 -0.6147  0.1496  0.6086 -0.7792    54.063   -17.216    36.381              
         T  <A  34   THR    > matches  <A 114   THR    >                        ( 10.9 A from    C3  PG4 A 202  )
         K  <A  60   LYS    > matches  <A  30   LYS    >                        ( 13.9 A from    O2  PG4 A 202  )
         E  <A 124   GLU    > matches  <A  59   GLU    >                        ( 14.6 A from    C4  PG4 A 203  )
 
KERBm  3*FOUND in 1w33  size =    3  ^    BBCRASP-1;                                              #    1                            
  RMSD =     1.79 A
  TRANSFORM   -0.8384 -0.2767 -0.4696 -0.4909  0.0086  0.8712  0.2370 -0.9609  0.1430    81.682   -59.920    74.098              
         T  <A  34   THR    > matches  <A 127   THR    >                        ( 23.5 A from    O1  GOL A1251  )
         K  <A  60   LYS    > matches  <A 207   LYS    >                        ( 28.2 A from    O1  GOL A1251  )
         E  <A 124   GLU    > matches  <A 147   GLU    >                        ( 10.4 A from    O1  GOL A1251  )
 
KERBm  3*FOUND in 2uxy  size =    3  ^    ALIPHATIC AMIDASE;                                      #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.1148 -0.7743  0.6223  0.8535 -0.2437 -0.4607 -0.5084 -0.5840 -0.6329    41.356   -17.099    65.633              
         T  <A  34   THR    > matches  <A 118   THR    >                        ( 11.9 A from    N   C3Y A 166  )
         K  <A  60   LYS    > matches  <A 131   LYS    >                        ( 17.6 A from    N   C3Y A 166  )
         E  <A 124   GLU    > matches  <A  71   GLU    >                        ( 18.3 A from    O3  C3Y A 166  )
 
KERBm  3*FOUND in 1mty  size =    3  ^    METHANE MONOOXYGENASE HYDROXYLASE;                      #    6                            
  RMSD =     1.79 A
  TRANSFORM   -0.8259  0.2774 -0.4909 -0.0811  0.8031  0.5903 -0.5580 -0.5274  0.6407    70.305   -28.661    49.500              
         T  <A  34   THR    > matches  <B 353   THR    >                        ( 51.8 A from   FE    FE D   4  )
         K  <A  60   LYS    > matches  <B 349   LYS    >                        ( 55.9 A from   FE    FE D   4  )
         E  <A 124   GLU    > matches  <B 365   GLU    >                        ( 41.2 A from   FE    FE D   4  )
 
KERBm  3*FOUND in 4u4c  size =    3  ^    ATP-DEPENDENT RNA HELICASE DOB1;                        #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.0728 -0.2821 -0.9566  0.9715 -0.1970  0.1321  0.2258  0.9389 -0.2597    42.752   -22.139   -23.457              
         T  <A  34   THR    > matches  <A 223   THR    >                        (  7.4 A from    O4  PG4 A1113  )
         K  <A  60   LYS    > matches  <A 202   LYS    >                        ( -5.6 A from   CL    CL A1111s )
         E  <A 124   GLU    > matches  <A 255   GLU    >                        ( 19.4 A from    C5  PG4 A1113  )
 
KERBm  3*FOUND in 2d5l  size =    3  ^    DIPEPTIDYL AMINOPEPTIDASE IV, PUTATIVE;                 #    2                            
  RMSD =     1.79 A
  TRANSFORM    0.2271 -0.8384 -0.4955 -0.7847  0.1438 -0.6029 -0.5768 -0.5257  0.6253    80.441    26.121     7.185              
         T  <A  34   THR    > matches  <A 527   THR    >                        ( 52.5 A from    O3  SO4 A 999  )
         K  <A  60   LYS    > matches  <A 498   LYS    >                        ( 58.4 A from    O3  SO4 A 999  )
         E  <A 124   GLU    > matches  <A 336   GLU    >                        ( 36.2 A from    O2  SO4 A 999  )
 
KERBm  3*FOUND in 2fsf  size =    3  ^    PREPROTEIN TRANSLOCASE SECA SUBUNIT;                    #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.5324  0.8452 -0.0475  0.3432 -0.2668 -0.9006  0.7738 -0.4631  0.4321   -12.815    20.350   -28.238              
         T  <A  34   THR    > matches  <A 104   THR    > 
         K  <A  60   LYS    > matches  <A 108   LYS    > 
         E  <A 124   GLU    > matches  <A 487   GLU    > 
 
KERBm  3*FOUND in 3tqv  size =    3  ^    NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE;                #    1                            
  RMSD =     1.79 A
  TRANSFORM   -0.6236 -0.1894 -0.7584 -0.5403 -0.5968  0.5933  0.5650 -0.7797 -0.2698    47.791   -22.074    31.214              
         T  <A  34   THR    > matches  <A 122   THR    >                        ( 18.9 A from    O1  PO4 A 289  )
         K  <A  60   LYS    > matches  <A 126   LYS    >                        ( 18.4 A from    O1  PO4 A 289  )
         E  <A 124   GLU    > matches  <A 107   GLU    >                        ( 33.9 A from    O4  PO4 A 289  )
 
KERBm  3*FOUND in 3a32  size =    3  ^    PROBABLE THREONYL-TRNA SYNTHETASE 1;                    #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.7283  0.6685  0.1508 -0.6840  0.7226  0.1001  0.0420  0.1760 -0.9835   -25.311   -20.882    79.545              
         T  <A  34   THR    > matches  <A 394   THR    >                        (  7.5 A from    O4  SO4 A 472  )
         K  <A  60   LYS    > matches  <A 396   LYS    >                        ( -2.7 A from    O4  SO4 A 472s )
         E  <A 124   GLU    > matches  <A  32   GLU    >                        ( 22.8 A from    O4  SO4 A 472  )
 
KERBm  3*FOUND in 3r84  size =    3  ^    MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT     #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.7524 -0.3485  0.5589 -0.5828  0.0432  0.8115  0.3070  0.9363  0.1706  -109.611    26.041    59.832              
         T  <A  34   THR    > matches  <B  29   THR    > 
         K  <A  60   LYS    > matches  <A  38   LYS    > 
         E  <A 124   GLU    > matches  <A  57   GLU    > 
 
KERBm  3*FOUND in 3zj5  size =    3  ^    CATALASE-3;                                             #    1                            
  RMSD =     1.79 A
  TRANSFORM    0.8924 -0.4492  0.0434  0.2436  0.3985 -0.8842 -0.3799 -0.7996 -0.4650    -6.430    40.164    25.886              
         T  <A  34   THR    > matches  <A 134   THR    >                        ( 18.6 A from    O2A HEM A4000  )
         K  <A  60   LYS    > matches  <A 132   LYS    >                        ( 25.1 A from    CBA HEM A4000  )
         E  <A 124   GLU    > matches  <A  47   GLU    >                        ( 21.1 A from    O1A HEM A4000  )
 
KERBm  3*FOUND in 1o5i  size =    3  ^    3-OXOACYL-(ACYL CARRIER PROTEIN) REDUCTASE;             #    2                            
  RMSD =     1.79 A
  TRANSFORM   -0.1588  0.8759 -0.4555 -0.6997  0.2256  0.6779 -0.6966 -0.4264 -0.5771    14.215   -21.982   102.517              
         T  <A  34   THR    > matches  <A 222   THR    > 
         K  <A  60   LYS    > matches  <A 153   LYS    > 
         E  <A 124   GLU    > matches  <A  30   GLU    > 
 
KERBm  3*FOUND in 1chk  size =    3  ^    CHITOSANASE;                                            #    1                            
  RMSD =     1.80 A
  TRANSFORM   -0.0020 -0.4386  0.8987 -0.8380  0.4911  0.2378  0.5456  0.7526  0.3686   -17.258    15.231   -38.168              
         T  <A  34   THR    > matches  <A 165   THR    > 
         K  <A  60   LYS    > matches  <A 168   LYS    > 
         E  <A 124   GLU    > matches  <A 209   GLU    > 
 
KERBm  3*FOUND in 5gn1  size =    3  ^    ATP-DEPENDENT HELICASE FUN30;                           #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.7267  0.6767 -0.1186  0.6713 -0.6627  0.3320 -0.1460  0.3208  0.9358    24.526   -15.514    -1.683              
         T  <A  34   THR    > matches  <A 960   THR    > 
         K  <A  60   LYS    > matches  <A 965   LYS    > 
         E  <A 124   GLU    > matches  <A 821   GLU    > 
 
KERBm  3*FOUND in 5y4r  size =    3  ^    CHEMOTAXIS PROTEIN METHYLTRANSFERASE 1;                 #    1                            
  RMSD =     1.80 A
  TRANSFORM   -0.2997 -0.4708  0.8297 -0.4227 -0.7142 -0.5580 -0.8553  0.5180 -0.0150    54.407     1.957     2.520              
         T  <A  34   THR    > matches  <A 238   THR    >                        ( 15.5 A from    O3  SO4 A 303  )
         K  <A  60   LYS    > matches  <A 210   LYS    >                        ( 17.2 A from    O3  SO4 A 303  )
         E  <A 124   GLU    > matches  <A 226   GLU    >                        ( 14.7 A from    O2  SO4 A 303  )
 
KERBm  3*FOUND in 5ws9  size =    3  ^    PYRUVATE KINASE;                                        #    1                            
  RMSD =     1.80 A
  TRANSFORM   -0.6213 -0.7827  0.0359  0.5034 -0.3637  0.7838  0.6004 -0.5051 -0.6200   115.447    -5.468    35.830              
         T  <A  34   THR    > matches  <A 107   THR    >                        ( 17.0 A from    O2G ATP A 505  )
         K  <A  60   LYS    > matches  <A 110   LYS    >                        ( 20.2 A from    O2G ATP A 505  )
         E  <A 124   GLU    > matches  <A 147   GLU    >                        ( 16.5 A from    O3' ATP A 505  )
 
KERBm  3*FOUND in 2fok  size =    3  ^    FOKI RESTRICTION ENDONUCLEASE;                          #    2                            
  RMSD =     1.80 A
  TRANSFORM    0.7976  0.3761 -0.4716 -0.2450 -0.5124 -0.8231  0.5512 -0.7720  0.3165    25.113   151.518     2.668              
         T  <A  34   THR    > matches  <A 176   THR    > 
         K  <A  60   LYS    > matches  <A 245   LYS    > 
         E  <A 124   GLU    > matches  <A 425   GLU    > 
 
KERBm  3*FOUND in 4mx2  size =    3  ^    ADENYLOSUCCINATE LYASE;                                 #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.3486  0.0214 -0.9370 -0.3162  0.9438 -0.0961 -0.8823 -0.3298 -0.3358    80.186   -54.479    13.887              
         T  <A  34   THR    > matches  <A 476   THR    >                        ( 53.0 A from    O3P AMP A 501  )
         K  <A  60   LYS    > matches  <A 207   LYS    >                        ( 47.8 A from    O3P AMP A 501  )
         E  <A 124   GLU    > matches  <A 443   GLU    >                        ( 69.5 A from    O3P AMP A 501  )
 
KERBm  3*FOUND in 4bqh  size =    3  ^    UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE;              #    1                            
  RMSD =     1.80 A
  TRANSFORM   -0.1861 -0.4779  0.8585 -0.9823  0.0716 -0.1731 -0.0212  0.8755  0.4828     9.606   -17.664   -54.175              
         T  <A  34   THR    > matches  <A 456   THR    >                        ( 16.2 A from    O2  SO4 A1538  )
         K  <A  60   LYS    > matches  <A 497   LYS    >                        ( 21.2 A from    O2  SO4 A1538  )
         E  <A 124   GLU    > matches  <A  98   GLU    >                        ( 10.0 A from    O3  SO4 A1538  )
 
KERBm  3*FOUND in 1r76  size =    3  ^    PECTATE LYASE;                                          #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.0340 -0.6757  0.7364 -0.8289  0.3926  0.3985  0.5584  0.6239  0.5468    33.307   -17.534   -53.276              
         T  <A  34   THR    > matches  <A 416   THR    >                        ( 20.7 A from    O1  GOL A4901  )
         K  <A  60   LYS    > matches  <A 373   LYS    >                        ( 23.3 A from    C1  IPA A8244  )
         E  <A 124   GLU    > matches  <A 244   GLU    >                        ( 12.8 A from    O2  IPA A8244  )
 
KERBm  3*FOUND in 1w17  size =    3  ^    PROBABLE POLYSACCHARIDE DEACETYLASE PDAA;               #    1                            
  RMSD =     1.80 A
  TRANSFORM   -0.4983 -0.5933  0.6322  0.8305 -0.1173  0.5445  0.2489 -0.7964 -0.5512    61.573   -54.177    40.338              
         T  <A  34   THR    > matches  <A 237   THR    > 
         K  <A  60   LYS    > matches  <A 241   LYS    > 
         E  <A 124   GLU    > matches  <A 117   GLU    > 
 
KERBm  3*FOUND in 3duz  size =    3  ^    MAJOR ENVELOPE GLYCOPROTEIN;                            #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.8379 -0.4674  0.2818  0.0745 -0.4135 -0.9075 -0.5407 -0.7814  0.3116    51.209    63.193     0.973              
         T  <A  34   THR    > matches  <A 296   THR    >                        ( 16.2 A from   HG    HG A   3  )
         K  <A  60   LYS    > matches  <A 434   LYS    >                        ( 20.0 A from   HG    HG A   3  )
         E  <A 124   GLU    > matches  <A 308   GLU    >                        (  4.5 A from   HG    HG A   3  )
 
KERBm  3*FOUND in 5b3g  size =    3  ^    PROTEIN SCARECROW;                                      #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.0159  0.0487  0.9987 -0.9519  0.3065  0.0002  0.3060  0.9506 -0.0512    -5.302    35.563    22.194              
         T  <A  34   THR    > matches  <B 464   THR    >                        ( 24.1 A from    O1  PEG B 602  )
         K  <A  60   LYS    > matches  <B 467   LYS    >                        ( 26.6 A from    O4  PEG B 602  )
         E  <A 124   GLU    > matches  <B 423   GLU    >                        ( 27.7 A from    C4  PEG B 602  )
 
KERBm  3*FOUND in 5urj  size =    3  ^    U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASE     #    2                            
  RMSD =     1.80 A
  TRANSFORM   -0.1716 -0.5754 -0.7997 -0.1986  0.8152 -0.5440 -0.9649 -0.0655  0.2542   106.659    60.488  -114.430              
         T  <A  34   THR    > matches  <A1352   THR    >                        ( 14.5 A from    C20 8LS A2202  )
         K  <A  60   LYS    > matches  <A1356   LYS    >                        ( 14.8 A from    C20 8LS A2202  )
         E  <A 124   GLU    > matches  <A1622   GLU    >                        ( 20.2 A from    O25 8LS A2202  )
 
KERBm  3*FOUND in 6cgy  size =    3  ^    BETA-LACTAMASE;                                         #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.3452 -0.8739 -0.3423  0.3230  0.4531 -0.8309 -0.8812 -0.1763 -0.4387    17.989     4.387    65.449              
         T  <A  34   THR    > matches  <A 175   THR    >                        ( 18.9 A from   CO    CO A 303  )
         K  <A  60   LYS    > matches  <A 177   LYS    >                        ( 21.9 A from   CO    CO A 303  )
         E  <A 124   GLU    > matches  <A 128   GLU    >                        ( 17.1 A from    O2  PO4 A 305  )
 
KERBm  3*FOUND in 1ja9  size =    3  ^    1,3,6,8-TETRAHYDROXYNAPHTHALENE REDUCTASE;              #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.8090 -0.5615 -0.1736 -0.5696 -0.6762 -0.4672 -0.1450 -0.4769  0.8669   -43.273    50.266    28.617              
         T  <A  34   THR    > matches  <A 162   THR    >                        ( -4.2 A from    O4D NDP A 402s )
         K  <A  60   LYS    > matches  <A 182   LYS    >                        ( -2.7 A from    O3D NDP A 402s )
         E  <A 124   GLU    > matches  <A 268   GLU    >                        ( 24.7 A from    O4D NDP A 402  )
 
KERBm  3*FOUND in 1kv9  size =    3  ^    TYPE II QUINOHEMOPROTEIN ALCOHOL DEHYDROGENASE;         #    2                            
  RMSD =     1.80 A
  TRANSFORM    0.6567  0.3893 -0.6459 -0.1556 -0.7681 -0.6212  0.7380 -0.5084  0.4438    23.052   -17.217    15.632              
         T  <A  34   THR    > matches  <A 299   THR    >                        (  6.4 A from    N6  PQQ A 801  )
         K  <A  60   LYS    > matches  <A 322   LYS    >                        (  2.6 A from    O5  PQQ A 801s )
         E  <A 124   GLU    > matches  <A 209   GLU    >                        ( 21.4 A from    O7B PQQ A 801  )
 
KERBm  3*FOUND in 4lpq  size =    3  ^    ERFK/YBIS/YCFS/YNHG FAMILY PROTEIN;                     #    1                            
  RMSD =     1.80 A
  TRANSFORM   -0.4023  0.7026 -0.5870 -0.8250 -0.5562 -0.1003  0.3970 -0.4439 -0.8034    59.020    17.412    69.770              
         T  <A  34   THR    > matches  <A 321   THR    >                        ( 27.6 A from   CL    CL A 501  )
         K  <A  60   LYS    > matches  <A 205   LYS    >                        ( 25.3 A from   CL    CL A 501  )
         E  <A 124   GLU    > matches  <A 269   GLU    >                        ( 21.2 A from   CL    CL A 503  )
 
KERBm  3*FOUND in 3by4  size =    3  ^    UBIQUITIN THIOESTERASE OTU1;                            #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.4845  0.8735 -0.0472 -0.2704  0.2008  0.9416 -0.8320  0.4434 -0.3335   -30.449    -9.378    56.344              
         T  <A  34   THR    > matches  <A  97   THR    > 
         K  <A  60   LYS    > matches  <A  95   LYS    > 
         E  <A 124   GLU    > matches  <A 203   GLU    > 
 
KERBm  3*FOUND in 2p8b  size =    3  ^    MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME          #    1                            
  RMSD =     1.80 A
  TRANSFORM   -0.1336  0.8298 -0.5419 -0.1166 -0.5561 -0.8229  0.9842  0.0468 -0.1711   -21.762   -17.647    28.324              
         T  <A  34   THR    > matches  <A 322   THR    >                        ( -3.0 A from    O1  NSK A 501s )
         K  <A  60   LYS    > matches  <A 326   LYS    >                        (  5.9 A from    C3  NSK A 501  )
         E  <A 124   GLU    > matches  <A 290   GLU    >                        ( 16.3 A from   MG    MG A 401  )
 
KERBm  3*FOUND in 3sqr  size =    3  ^    LACCASE;                                                #    1                            
  RMSD =     1.80 A
  TRANSFORM    0.4021  0.1035 -0.9097 -0.9155  0.0286 -0.4014  0.0155 -0.9942 -0.1062    -0.501    -6.275    31.150              
         T  <A  34   THR    > matches  <A 307   THR    >                        (  7.0 A from    O5  NAG A 560  )
         K  <A  60   LYS    > matches  <A 215   LYS    >                        (  4.4 A from    O7  NAG A 560  )
END