Glaciozyma antarctica protein structure database

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Protein ID : LAN_17_164
Category : putative
Original description : Putative DNA-directed RNA polymerase II subunit
Sequence : MFFLKELTKTLPLHPSYFTPALPAYLTKLLHETVEGTCSGKLGYIIAVIKILDSGRGKVVEGGAEFKITYTAIVY
RPFRGEVVDGVVGSVNKMGIFVDVGPLSCFISTHLIPPDFKFDPNANPPCFASVEDTLKIEKGSKIRLKIVGTRV
DATEIFAIGTIKEDYLGPLG
KEGG Ontology ID : K03015
Disordered region length : N/A
Disordered region residues : N/A
Disordered binding region residues length : N/A
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF03876 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 9-62 GO:0006351
Pfam PF00575 S1 RNA binding domain 77-155 GO:0003676
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_17_164,2.40.50.140-FF-000043,79-169 FunMod -1.12645 Putative DNA-directed RNA polymerase II subuni LAN_17_164,2.40.50.140-FF-000043,79-169
LAN_17_164,3.30.1490.120-FF-000001,1-78 AlphaFold2 91.01 Putative DNA-directed RNA polymerase II subuni LAN_17_164,3.30.1490.120-FF-000001,1-78
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_17_164,3.30.1490.120-FF-000001,1-78 83,86,96,98,99,100,101,102,103,105,107,109,110,144,146,148,149,150,151,152,153,154,155,156,158,160,162,164,165,166
LAN_17_164,2.40.50.140-FF-000043,79-169 1,2,3,4,5,35,36,37,38,39,40,41,42,44,46,47,49,71,73,75,76,77,78

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