Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_16_881
Category : putative
Original description : Putative ABC transporter 
Sequence : MTTRAADPRDRAGLPLRFSNLAIPQISGGSGGSEELVQDLGNGVWDVVTFGPLRRLGAAAIGYKQTGKEKLLVAE
VEGIVHQGELLLILGPPSSNASILLRALSSPSDLQLSETSQLDIWTHGAVDLVYMGEHDVHFATLSLKACMLPSS
RAKTPRVRPEGWSRKEWAERKLLSLVDSLGLNHALGTKVGSPLVRGLSGGERKRASIVEALLTRASVLLLDGPTN
GLDSSTALSMLSFLRSWAKDGKRSLVSTAPHIADPLYNQFDKVLILSTRGRSIYFGKASDAQAYFEAVGLGFSRR
LSSGEGIAEFLVGCVEGRGNDKSVPSTPKSTHYTVSFLTQVGILTRRQYALITSELPTYVTKTVVNLLLSLLVGT
VFFALPQTTSAAFTRGSLLLLSIMFNAYLSLAELGKTARREGRSVKRAGLAGDLPLIGAQVLLFGTMTYFLAGLQ
RTIEHFAVYILFVYATALTLSAMFRMFAAFSPSFDEAIRYCGITLNILVVYAGYFIPTPSMRPWLKWIHFVIDPI
SYAYEAVLTNEFHNLDLTCSPSDIVPSGPSYTDIRYQTCLLPGSTPRSLVVSGDAYLATAYDFHYSKLWSNLGIM
MIQAFAFLIIGVVATDFLHFAPEGTKRIWARTQRIKLRLRRKWYKSDELEMGDAGLYVDPIDDVSDGSSAFGETD
DPLKIDTSGSVLVWRDVSLWVDTPLEARRLLDRISGYIRPGSLCALMGASGAGKSTLLNALAGRSEGVVKGTVLV
DGQPPDAEFYRTTGYVEQFDLHDDRSTVREALEFSAILRQDSKIPRAEKLAYVEVVLDLLDLTHLQDAIIGHPSA
GLSLEQRKRLTIAVEVVSRPAILFCDEPTTGLDTKSALRVVRLLRRLARSGLAVVATIHQPSAETFNIFETLLLL
QRGGKQVYFGPRDAAVAFFSPSGLPDDQTNPAEFLLDAAGAGTDVPDENLSMVSEMDILSKQWKGSSQAKVLQES
ITSLSAPENSRPRKVTTSATRAQQCLELTKRVTRHYYRDLSYSYTKIFTATVVSLIIGLSFYNLNNSVVSLDNRL
FSVFLILFVPPVFMNLGIFKMFKLRGLWEAREGPSKIYGRTAFVTSLIVSEVPYSLLCATIYFVLWYFMVGLPLV
TGTALYTFAMVQLFFFFMSTWAMWITALAPSLGMVANILPFFLVSMEVFNGALMPYAQMPVAWRWLYWASPFQWY
VRGVVGVLLHKLPVECEFMELVTFDSPEGATCGEYAAEYLSTQAGYLVDAASDSLCRFCKFANGDDFLASINISY
SDRWLAFGVFLAYTITNILLIYVFTYFPPRLPSWRPKSARRMATEVARGWRLLVEDAERIGAEVLAEGTRSAFT
KEGG Ontology ID : K08711
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length : N/A
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF01061 ABC-2 type transporter 426-537 GO:0016020, GO:0140359
Pfam PF06422 CDR ABC transporter 550-626 GO:0005524, GO:0016021, GO:0042626, GO:0055085
Pfam PF00005 ABC transporter 706-854 GO:0005524
Pfam PF19055 ABC-2 type transporter 884-993 GO:0140359
Pfam PF01061 ABC-2 type transporter 998-1208 GO:0016020, GO:0140359
ProSitePatterns PS00211 ABC transporters family signature. 197-211 GO:0005524
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_881,3.40.50.300-FF-000054,688-918 ColabFold 95.03 1.783 ABC multidrug transporter atrF LAN_16_881,3.40.50.300-FF-000054,688-918
LAN_16_881,PF00005,76-225 ColabFold 89.56 1.984 ABC transporter LAN_16_881,PF00005,76-225
LAN_16_881,PF01061,998-1208 ColabFold 88.67 1.946 ABC-2 type transporter LAN_16_881,PF01061,998-1208
LAN_16_881,PF01061,339-537 ColabFold 79.46 2.95 ABC-2 type transporter LAN_16_881,PF01061,339-537
LAN_16_881,PF06422,550-626 ColabFold 74.56 3.174 CDR ABC transporter LAN_16_881,PF06422,550-626
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_881,3.40.50.300-FF-000054,688-918 35,36,37,38,39,41,43,44,81,82,83,84,85,86,87,88,89,90,93,94,97,132,134,135,136,137,138,139,142,144,152,165,167,168,169,170,197,212,214,215,220
LAN_16_881,PF00005,76-225 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,24,25,44,136,141,142,143,144,145,147,148,149
LAN_16_881,PF01061,998-1208 18,22,23,25,29,33,68,69,168,169,170,171,172,173,174,175,176,177,179,180,181,184,188,189,190,191,192,193,196,197,199,202,205
LAN_16_881,PF01061,339-537 61,155,156,158,159,162,163,165,166,167,168,169,170,171,172,174,175,176,177,178,179,180,182,183,184,186,189,192,193

Footer