Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_880
Category : putative
Original description : Putative saccharopine dehydrogenase
Sequence : MAVELSHPLIVDGWFREISDQWAGQAMTLRVKKILHMEKSLYQDVLVFESTNHGNVLVLDGAIQCVERDEFSADD
LALTLLALAEEMIAHLPLASHPNPVSVLVIGGGDGGVLREVLKHPSVKSAVLCDIDEAVPRVSKAFLPHMAAGFN
DPRVTVHIGDGFKFLDDKKAEFDVIITDSSDPVGPASSLFEKPYFQLLKESLKPGGSISTQGECIWLHLPLINDL
MTMTRTLFPVAEFAYTSIPTYPSGTIGFVVCCLDETRDLRTPLRKVENVRYWNEEIHRASFILPDFAQTVVDASK
KVASVAASSAAPKKVLLLGSGFVAQPAADYILRRAENSLTVGCRTLSTAQSLASSLSRNASAISVDVSDEASLDA
AVKEHDLIISLIPYTFHANVIKSAIKFKKNVVTTSYVSEAMQALEPACIEAGITVMNEIVKTIDEVHQAGGQVTG
FISYCGGLPAPESADNPLGYKFSWSARGVLLALGNSARLYSKGELVEIDGKDLMAHANPYFINPALAFVAYPNRD
STTFKEKYQIPEAETVVRGTLRYQGFPAFIKALVELGFLNETAQAWLAPGASLAWNEVTAKAIGATDSSEAALLA
RVSALVKFSSPAEEQRIVSGLRWIGLFSADKATPRGNLLDTLCATLEAKMQYEDGERDMVMLQHKFEITNKDGSK
EVRTSTLLDFGAPIGSGTGPSSMAKLVGVPCGIAVQLLLDGKISKKGVLAPYTREIVDPLLVEVEKEGITMVEKV
VSRTAA
KEGG Ontology ID : K24034
Disordered region length : N/A
Disordered region residues : N/A
Disordered binding region residues length : N/A
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 3.30.360.10-FF-000008 Alpha-aminoadipic semialdehyde synthase, mitochondrial 429-553 N/A
FunFam 1.10.1870.10-FF-000002 Saccharopine dehydrogenase Lys9 554-651 N/A
Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 315-428 GO:0016491
Gene3D 2.30.140.10 Spermidine synthase, tetramerisation domain 6-64 N/A
ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 102-115 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_880,2.30.140.10-FF-000001,3-67 ColabFold 94.72 1.895 SPE3p Spermidine synthase LAN_16_880,2.30.140.10-FF-000001,3-67
LAN_16_880,3.40.50.150-FF-000013,82-298 ColabFold 96.3 1.758 Spermidine synthase LAN_16_880,3.40.50.150-FF-000013,82-298
LAN_16_880,PF03435,315-431 FunMod -0.57506 2.416 Saccharopine dehydrogenase NADP binding domain LAN_16_880,PF03435,315-431
LAN_16_880,PF16653,435-744 ColabFold 95.91 1.731 Saccharopine dehydrogenase C-terminal domain LAN_16_880,PF16653,435-744
Ligand binding site information :
Structure ID Residues
LAN_16_880,PF16653,435-744 110,111,113,21,22,226,23,264,267,268,40,45,48,49,87,89
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_880,2.30.140.10-FF-000001,3-67 7,9,11,12,14,16,17,18,19,20,21,22,23,24,25,26,27,28,43,50,51,55,57,58,59,60,61,62,63,64
LAN_16_880,3.40.50.150-FF-000013,82-298 1,25,28,49,50,51,52,53,55,56,58,59,60,61,62,63,64,66,77,97,98,135,136,137,138,139,140,159,161,163,164,165,166,167,168,169,208,210
LAN_16_880,PF16653,435-744 320,321,322,323,327,382,384,386,387,388,389,390,391,393,407,408,409,410,411,412,413
LAN_16_880,PF03435,315-431 21,39,228,250,262,264,265,266,267,268,269,271,272,273,275,276,292,301,305,310

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