Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_855
Category : putative
Original description : Putative glutamate synthase [NADPH]
Sequence : MAPSLTPTPINHNKAVSFDDESRRHQHGGVIDPPLDGDDRLPHAPSVLRDEAFLGLPAAQGLYDPENEKDSCGVG
FVCHIKGQPSHKIVSDARNLLCNANGKSTHRGATGADSRDGDGAGVMVGIPHAFFVRESERELDVKLPSEGEYAV
GNVFFKKGNADLLVSHKATFEQIAESLNLRVLGWREVPTDGSILGPAALSREPHILQPVVVLATSYGHGKVPDPD
ATFDEKYFERQLYVLRKHATHTLLLSSGFYICSLSNKNIVYKGQLSPIQVYNYYHDLNHVLFASHFCLVHSRFST
NTFPSWDRAQPMRWAAHNGEINTVRGNKNWMRAREGNLQSSRFADELDLLYPIIETGGSDSAAFDNVLELLTVNS
VVTLPEAVMMLIPEAWQNNTAMEKEKVAFYQWAACLMEPWDGPALFAFSDGRFCGANLDRNGLRPCRWITTTDDI
MICASEVGTIYVEPEKVTRKGRLQPGKMLLVDTLEGRIVDDKELKMKAASKQPFANWLESQMLRLPNIIAKERAK
GVRLTVELDDTTVSTDPKLLAFGYTFEQLDLLLRPLVNDGKEALGSMGNDAPLACMATAPRVIYDYFRQLFAQVT
NPPIDPIRESIVMSLECYVGAEGNLLEMNATQCHRLLLTSPVLSIEEVNALKRLHEVHADWPARIIDITFDKSEG
VVGYQNALDRVCAETSQAIAENIRVIILSDRNVGVDRVALSALVATGGVHHHLIRNKQRSKVALIIETGEAREVH
HICVLLGYGADGICPYLCIEAMLKLRREGLLKVDLTEDQVIGNYKYATDGGILKVMSKMGISTLQSYKGAQIFEA
LGLDNSVIDRCFVGTASRISGATFELLAIDALEIHERGYPSRDTVIPPGLPETGEYHWRDGGEAHINDPTGIANL
QNAVREKNQESYDAYSENARKQVRAVTLRGLLEFDFEKAQPIPIEQVEPWHQIVHRFVTGAMSYGSISMESHAAL
AVAMNRIGGKSNTGEGGEDAERSDILPNGDTMRSAIKQIASGRFGVTSNYLADADELQIKMAQGAKPGEGGELPG
HKVSASIARTRHSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCANPRARISVKLVSEVGVGIVASGVAKAKADHI
LISGHDGGTGASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVTLQTDGQIRTGRDVAIACLLGAEEWGFATTP
LIAMGCIMMRKCHLNTCPVGIATQDPTLRAKFTGQPEHVINFFYYVAEELRTYMAKLGFRTINEMVGRADLLRVD
DTLRNPKTANLDLSALLKPAWQMRPGVATFKSRAQDHKLYIRLDNKFIDESEPALLNGLPVRIECEVVNTDRALG
TTLSNHVSKRYGEEGLPKDTIHISATGSAGQSLGAFLAPGITIELSGDANDYCGKGLSGGRLIVYPPKASTFKAE
ENVIVGNACLYGATSGQAYFRGIAAERFAVRNSGAVSVVEGCGDHGCEYMTGGRVVVLGTTGRNFAAGMSGGIAY
VLDYAKDFRSKVNIEMVELDTVNDPHEIAELRSMIEDHHHWTGSERAGRILKNFNQILPRIVRVMPLDYKLVLEE
QAAKAIADKKSKQNVVEFVSPKNVAAPVGGKSEPAVVDLEDSMVDEATAKKRVETLDKVRGFMKYKRLAESYRNP
RKRVKDWAEISSRLSEDDCKVQAARCMDCGVPFCQSDTGCPIGNIIPKWNDLVFKGQWQDALNRLLMTNNFPEFT
GRVCPAPCEGACVLGINEQPVGIKSIECAIIDKGFEMGWMKPRPPQQRTGKKVAIIGSGPAGLAAADQLNKAGHS
VTVYERNDRCGGLLTYGIPNMKLDKRVVQRRLDLMSEEGVELVTKAHVGVSHDAAEIRKENDAVIVATGATWPRD
LKLPNRNLDGIHFAMEFLQLNTSSLLNSNLEDDKYLSAKGLNVIVIGGGDTGNDCIGTSIRHGAKSVTNFELLPA
PPATRASDNPWPQWPKVFRVDCKSFFFAHGHSEVAAFFGKDPREYSINTKEFVSDGNGKIKGINTIRVAWEKDAL
GNWRMAEVPGSFFFFPADLVLLALGFLGPEEAAVKALGVDQDGRSNVKTPQGKFTTSVDGIFAAGDCRRGQSLIV
WGIAEGRGAAVEVDRYLMHDTRLPSAGSIKVRSFVPATQHHHAEVATTA
KEGG Ontology ID : K00264
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd00713 GltS 72-502 N/A
Pfam PF04898 Glutamate synthase central domain 544-829 GO:0006807, GO:0015930
Pfam PF01645 Conserved region in glutamate synthase 892-1260 GO:0006537, GO:0015930, GO:0016638
Pfam PF01493 GXGXG motif 1341-1527 GO:0016491
Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1653-1762 N/A
PRINTS PR00419 Adrenodoxin reductase family signature 1777-1799 N/A
PRINTS PR00419 Adrenodoxin reductase family signature 1800-1813 N/A
PRINTS PR00419 Adrenodoxin reductase family signature 1918-1932 N/A
SUPERFAMILY SSF51971 Nucleotide-binding domain 2032-2121 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_855,1.10.1060.10-FF-000006,1621-1775 AlphaFold2 91.27 Putative glutamate synthase [NADPH] LAN_16_855,1.10.1060.10-FF-000006,1621-1775
LAN_16_855,2.160.20.60-FF-000001,1314-1585 FunMod -1.29986 Putative glutamate synthase [NADPH] LAN_16_855,2.160.20.60-FF-000001,1314-1585
LAN_16_855,3.20.20.70-FF-000017,877-1297 AlphaFold2 94.82 Putative glutamate synthase [NADPH] LAN_16_855,3.20.20.70-FF-000017,877-1297
LAN_16_855,3.20.20.70-FF-000031,525-876 FunMod -0.42076 Putative glutamate synthase [NADPH] LAN_16_855,3.20.20.70-FF-000031,525-876
LAN_16_855,3.40.50.720-FF-000113,1776-1881 AlphaFold2 96.53 Putative glutamate synthase [NADPH] LAN_16_855,3.40.50.720-FF-000113,1776-1881
LAN_16_855,3.50.50.60-FF-000022,1882-2050 AlphaFold2 78.62 Putative glutamate synthase [NADPH] LAN_16_855,3.50.50.60-FF-000022,1882-2050
LAN_16_855,3.60.20.10-FF-000001,72-517 AlphaFold2 93.51 Putative glutamate synthase [NADPH] LAN_16_855,3.60.20.10-FF-000001,72-517
Ligand binding site information :
Structure ID Residues
LAN_16_855,3.20.20.70-FF-000017,877-1297 111,13,14,15,157,16,171,173,176,227,250,254,255,256,257,258,259,260,263,266,267,296,298,300,301,319,321,322,323,325,330,33
2,334,336,337,346,5,50,82,83,84,85,86,87,90,91
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_855,1.10.1060.10-FF-000006,1621-1775 27,33,36,37,38,39,40,41,100,101,103,104,105,107,108,109,110,129
LAN_16_855,3.20.20.70-FF-000017,877-1297 1474,1476,1477,1478,1493,1495,1498,1513,1514,1515,1516,1565,1567,1568,1569,1570,1571,1572
LAN_16_855,3.40.50.720-FF-000113,1776-1881 1,4,5,6,7,8,9,11,16,254,258,260,262,263,264,266,267,268,269,270,331,332,334
LAN_16_855,3.50.50.60-FF-000022,1882-2050 571,572,574,575,576,580,581,591,593,594,595,596,597,598,599,600,601,602,603,604,605,609,612,620,621,622,623,625,628,629,630,631,632,633,634,635,637,699,808,809,810,811,812
LAN_16_855,3.60.20.10-FF-000001,72-517 7,9,11,37,38,39,40,41,42,43,48,91,92,93,94,95,96,97,98,99,100,101,102,103,104,105,106
LAN_16_855,2.160.20.60-FF-000001,1314-1585 42,43,44,45,48,70,74,80,81,82,83,84,85,86,88,90,91,92,93,94,95,96,98
LAN_16_855,3.20.20.70-FF-000031,525-876 1,29,30,31,32,33,34,35,36,37,38,42,201,227,228,229,230,231,248,249,289

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