Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_805
Category : putative
Original description : Putative DNA ligase
Sequence : MSWRGGNFQRDEPAEENSDLEAAVPESTPNEVLRPLGFENKGPSQLFMRLVKLLEDFSDTKSANGAKRKAGFKGP
LLVHFLTMWREQVGPDLYPVLRLMLPDRDNRRKTYYLKEQKLAKAYITALALSRDSAAAQSLEHWKVPTKEEIFL
GAGDFSTVAFSIIKQRSSVLSPSLTVDDVNDILDRISNAGSGRASGGRGGTGAEHADIIRECTQKMTSVEQKWFI
RIILRDLKVGLGERAVFNAFHPDANEYFNTCSDLLRVAIKLYDPNYRLPKQDSVVRPGDAFRPMLCSRNERDLAG
IVKSMSKLCKADSNQPTPEEEEDPYHYAKDEFIIEEKLDGERIQLHKIGDAFHYWSRKANNYTYLYGKDATPGSG
SLTPYLADTLFPDIIEVILDGEMLAYDPMTDKYIPFGTLKSFANLKAFGPMDTRPCFKVFDILYIRGPNGSQCLL
DVPLRERKRLLHRVFKPKKGVLELADMRKGRTTVDISNYLKWVLESRGEGLVIKNPESRYVLSGREDTWIKVKPD
YMDELGENIDAVVIGGYWGSGGRGGRHSSFMVGLRDESKQKVDGEYQFVSFAKVGSGFNAAAYEWISKKTAGKWY
NPDPKRFQTTKGQPRWFNTVSEYPDQFINPSDSFVVTIKAAEIVQGNDYGAGFTLRFPRAIKLMGEEEYAQADAL
TLEGCRALRGAGGKRKFGENLRRRRKLARSPRVFTTSRCSQTSSKALPSARSLIRAALRFADDLADVHRLPNTAR
STKENLEKLIFENGGRIIQRVPDEGTSRIVIACEYTERKGIFLKRGSSTADIICPNWALECIEDNELVPLTKRFY
IRALPATIESETFNLDDLEGSPTPDLAPIEEDVGAADAPEHRSDEEPVTTDDEGGFEEVEPETEDAEFDMVDRPL
AEEVKPIRSGVSQLTVEESIKMQVDPKSMTDAKPGMGAGLGAVAFDSTRLFAPFVCYFDTAENASNNRLPESNKS
KKIQDQADAALLEAQNLLVENGGEATANLLNPDLTHIIVHATVPDRYELLIRKTSEPRYRKLVTHDWVEESVDHG
ESDVLDEHDYKP
KEGG Ontology ID : K10777
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF04675 DNA ligase N terminus 47-246 GO:0003677, GO:0003910, GO:0006281, GO:0006310
Pfam PF04679 ATP dependent DNA ligase C terminal region 548-663 GO:0003910, GO:0006281, GO:0006310
Gene3D 3.40.50.10190 BRCT domain 739-855 N/A
Gene3D 3.40.50.10190 BRCT domain 947-1061 N/A
ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 335-343 GO:0003909
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_805,PF01068,289-523 FunMod -0.79393 2.88 ATP dependent DNA ligase domain LAN_16_805,PF01068,289-523
LAN_16_805,PF04675,47-246 FunMod -1.15728 2.795 DNA ligase N terminus LAN_16_805,PF04675,47-246
LAN_16_805,PF04679,548-663 FunMod -0.3283 2.547 ATP dependent DNA ligase C terminal region         LAN_16_805,PF04679,548-663
Ligand binding site information :
Structure ID Residues
LAN_16_805,PF04679,548-663 554,555,556,557,558,573,580,581,588,591,595,599,617,624,627,628,630,633,634,635,636,660,663
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_805,PF01068,289-523 400,411,416,417,419,421,422,423,424,425,426,429
LAN_16_805,PF04675,47-246 82,83,84,85,86,87,88,89,90,91,92,93,94,96,176,242,243,245,246
LAN_16_805,PF04679,548-663 550,552,554,555,556,557,558,559,572,573,576,580,591,596,616,620,621,622,629,632,633,634,640,641,642,643,644,645,646,647,648,650,651,652,653,654,655,656,657,658

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