Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_749
Category : putative
Original description : Putative 5'-3' exoribonuclease 
Sequence : MGVPALFRWLSKKYPKIVLPVIEDLPVSIPGPDGTTEEIPVDTTGPNPNGEEFDNLYLDMNGIVHPCTHPEGKPA
PKNEEEMMNEIFLYTDRVVSMVRPRKLLVMAIDGVAPRAKMNQQRSRRFRSAQEAKTKEEDRIAAIAEWEAMGKD
VSDEFRNEKGWDQNAITPGTPFMDLLAKSLRYWVAKKLNEDPGWAGLQVIISDASVPGEGEHKIMDFIRRQRSHA
SHDPNTKHVIYGLDADLIMLSLATHEPHFRVLREDVFAQDKKGRGCHTCGQMGHHSSQCKGKPKEKQGEADLVQK
PTPHKPFIFLDVAILREYLAVELSAPIHAFPFDLERAIDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLMNIWKS
SLERMGGYLAEHGKVNLARAQLILEGLASREDEIFRKRREAEERQDRTDKRRRIDAENRQGGTHMQNGHDYVPVK
PTPARPALPPASYALPNDSTLPPGPSSLPARPAWVVPPVIEELKPDIAAMVGSNSSIVANRKAIRMANLSAAEMI
KAELAGGVAVDTTAVKKNLSAAELLKKEFAGESEDTTMGEPEKIVEIVEEAMEAVPEPAVEVDETMGVDGESRGH
KRKADEVEEEKVEEEEDEDEEAVDAFLAASLLPPVVVPGIQVPAPLKLMGNNVVEQEDTVQLWEPGYKERYYRQK
FGIELSDTEFRRSLVKSYVEGLCWVLEYYFQGTPSWQWYYPHHFSPFASDFTDLATLDIKFEIGAPFRPYEQLMG
VFPAASRFALPEPFHPLMTDEESPIIDFYPEEFDVDMNGKKMLWQGVALLPFIDPGRLLEAMATKYGDLSDAEIK
RNTLGSDTLFVSQDHPLYDYLEGLYTKRKIKEPVDLDTKRSKGIAGAVLPDPVCIPGSTFDSPLPSLPDIPTDKS
ISASFSFPPQRFPHRSMLLPGVKHDRPVLSSYDKDGVRRGGTGGYESNGFHAQRGREQSGPGFAKLDRGSRGGGG
GGGGGGGRQSYPPPQSGGGGGGSYGGQSSYGAPQQQQGGQQGGRDPYGGYDSRRGGGGGGGQGGYGGASYGGHQQ
QAQQPSYGGYAPAQGGYRPPPMTGGGYQPPPAPQQGGYGGYGQGAPPPPRYGAPPPAAYGAPPPPAPAYQGYGGY
GGNGQGAPPPAWQQGGRGGGQTGRGQERRY
KEGG Ontology ID : K12619
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 3.40.50.12390-FF-000003 5'-3' exoribonuclease 1-140 N/A
FunFam 1.25.40.1050-FF-000002 5'-3' exoribonuclease 729-829 N/A
Pfam PF17846 Xrn1 helical domain 332-438 N/A
ProSiteProfiles PS50158 Zinc finger CCHC-type profile. 271-285 GO:0003676, GO:0008270
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_749,PF03159,1-259 FunMod -1.02222 2.159 XRN 5'-3' exonuclease N-terminus LAN_16_749,PF03159,1-259
LAN_16_749,PF17846,655-933 ColabFold 92.98 1.836 Xrn1 helical domain LAN_16_749,PF17846,655-933
LAN_16_749,PF17846,332-438 FunMod -1.32235 2.273 Xrn1 helical domain LAN_16_749,PF17846,332-438
Ligand binding site information :
Structure ID Residues
LAN_16_749,PF03159,1-259 108,109,115,119,122,123,163,164,166,167,168,209,211,212,238,239,241,59,61,62,65
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_749,PF17846,655-933 1: , 2: , 3: , 4: , 5: , 6: , 7: , 8: , 9: , 10: , 11: , 12: , 13: , 14: , 15: , 16: , 17: , 18: , 19: , 238: , 239: , 240: , 241: , 243: , 244: , 245: , 247: , 258: , 259:
LAN_16_749,PF03159,1-259 42,43,44,46,47,49,50,51,52,59,260,262,263,264,270,275,279

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