Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_569
Category : putative
Original description : Putative RRM (RNA recognition motif) domain-containing protein
Sequence : MHEEPAYATFPPAGFAPPELPLLPGQVPQHSNADFESMKRSFEATAISAANEHTQRFPNASGQQQQQQQHQQFAQ
GPQAMMGGGYTDVYGGAQAGSYGGGYGAGAPPFIPQAQLQAQAAAQQQAQQQQGTPQSNQSGFSNPGSPYLGVGT
PNTVPFGSPSSQNGNLPQPGSFNGSSYSGQFDTMPSSPNPNPYSQNPYAGFGGLGFNNQAFMGMMPGMLGMGSPQ
LGGSVQMQQGMGFGMPFPMMGQQGVGMGLSPATTQTGRTVYVGNLPSDASVDELLSQVRFGPIDSVKILPEKSCA
FISFLDPTTAAAFHSDALMRKIRLHDQDLKLGWGRPSSVAANVLMAVQQSGATRNVYLGNLDESVTEQTLRDDLS
RFGPIDQVKIVRDKNIGFVHFLSIATAIKVVQTLATEPEWAGRRIFYGKDRCAYVPKNQHQQQQHNMAAAAMGSM
AANYGGFGGLNGFAPGFGGFGSDLSAMGLNAGADPNAQLGNRTVYLGNIHPETTTEEICNTIRGGILQQIRYIPD
KHICFVTFVDAQCALAFFQTASFQGIALHNRRLKVGFGKNSGPTSPGIAMVVQSGGSRNVYIGNIDDFDLYNEER
LRKDFGEYGEIELVNTLREKQCAFVNFTNIANAIKAIEGMKAHPEYTALKIAYGKDRCGNAPRSLGFGAHQQQNF
SAMHSPYAVDGLGFDQSLGQPSLEAFDPTAVVDFNSLDGTPLALGAGALVLDESVANVAA
KEGG Ontology ID : N/A
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd12522 RRM4_MRN1 580-660 N/A
FunFam 3.30.70.330-FF-000400 Negative regulator of differentiation 1 480-565 N/A
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 356-409 GO:0003723
Gene3D 3.30.70.330 G3DSA:3.30.70.330 253-339 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_569,3.30.70.330-FF-000064,571-661 FunMod -1.38376 Putative RRM (RNA recognition motif) domain-containing protein LAN_16_569,3.30.70.330-FF-000064,571-661
LAN_16_569,3.30.70.330-FF-000120,340-431 FunMod -2.15438 Putative RRM (RNA recognition motif) domain-containing protein LAN_16_569,3.30.70.330-FF-000120,340-431
LAN_16_569,3.30.70.330-FF-000400,480-565 AlphaFold2 83.42 Putative RRM (RNA recognition motif) domain-containing protein LAN_16_569,3.30.70.330-FF-000400,480-565
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_569,3.30.70.330-FF-000400,480-565 586,588,589,590,591,592,593,595,596,608,616,617,619,620,621,622,624,640,641,643
LAN_16_569,3.30.70.330-FF-000064,571-661 353,354,355,357,360,381,382,383,384,385,386,389,391,393,395,397,398,399,403,406,421,423,424,425,426
LAN_16_569,3.30.70.330-FF-000120,340-431 13,14,16,26,27,30,32,34,36,37,38,39,40,41,42,43,44,49,51,53,55,56,57

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