Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_514
Category : putative
Original description : Putative DNA polymerase zeta catalytic subunit
Sequence : MAAAQGAPAAAHSPPFIRFRLSHIDSVMSKVEEEHDVRESPFLPAGEKIASVPVIRIFGATDKGQRVVAHVHGAF
PYVYVEYKGKLDPDSVTSYTSRLGRKINQLVSSSLGNSKKQQHVAFIVICKGTSFYGYHVGYKPFLKIYLTQPSH
KSRVSECLRAAFQLDVYEDHIPFPLQFMLDANLYGCGWVELESCLFRNPLPEHVPSPSDAYNPTHADGPLHSRTY
TELTVPTSCVHPSSGPAKISYCTLELDTSVSAILNRHLIAPRTLHANFSELLRPESIERDKLVHSVKELWDDERR
RRRAKGESGPEELVDDKPRAWDSREEGAPVWKSEEGMRERIAEMAEEDLRRYKAKHGARKEPRFEDYPAERAKEG
GQQGWLARIRTTWEQIGAVFPETVRKDRSEEYVFSPWAMRDLVVSHAPTLKGEEEVIKTEESEEVEVDEKAWTST
QAARSNDFEEEVDLDGLEREEEREQDDGFWAEPEEEGSREDEQEREGSEVEERSPKRAKRDGSRATEVDEATGAA
VGPSRPFSPLSSSANSPPSPHPPTQPASAASPWFSSPQNPRKANPFASPDKLVRVRFADQPVEVARRGISFSSTS
ASLSPAPPQPLSNMTSMDLDDLLSDALDYSQPSPTLAVPGPSMVPFHLRSWNLPSLSADASEPIIPSSPTRATPN
KEPLSSSHEAGAAFPPIPGQVPNLSPRESSMPLLSQSDAPINSHPSTLVDGSVCHTQDSSSGSSFQRASLPKPQH
PLSRTAFAWSEAPPTSAQLINSIESFGKSRVVYVDPFFSNSADVPPKAREYAGRSFKLRGNAIKFVPAFAHWRKE
EPVILPARRSGRGSWEWAGTPPTANEVSEWLREEKKGEEMAKKPQFVTSQIQGPTQVDGGYNFVGVKGAKESHEQ
QHLDVLSMELHVNTRGKLLPDPKEDAIVALFYCLQSEADDLVGNGREEDRHVGVIAVGTDELRRVVGPTSYTFEV
VQSEHDLLNLWIDKIRAWDPEIVAGYETVHASWGYLLERADAAHDWSLVEELGRVTAQGTGQFAAKASDRRGFNE
LSFSGRHLLPIWQTLEADNRLQQYTFENVAFHMLRRRIPHFSFETLSKWYTSGVPHQVARVFEYWRDRVEMDVEM
LDEGEVISQTCESARVFGVDFKSVRTRGSQFKVESVMFRIAKPESFLLLSPNRPQVGKQNAAECQPLVMEPKSAF
YKGPLVVLDFQSLYPSVMIGYNYCYSTCLGRIGSYRGADKFGTSTLTLPPGLLYLLKDYINVSPNGFMFVKPQVR
KSLLAKMLAELLDTRVMVKTGMKSAEGDKALFKLLNARQLALKFLANVTYGYTSATFSGRMPCVEIADAIVQTGR
ETLERAMETIKSRAEWGAEVVYGDTDSLFIYLPGKSKDDAFRIGHAMANTITSQNPRPIKLKFEKAGHPPPCSLN
AADAHFLQVYLPCVLLAKKRYVGFKYEHETDLEPDFDAKGIETIRRDGFPAAQKMQETCLKILFRTSDLSLVKAY
CQEQWQKLLAGNVSPQDFTYAKQVRLGTYSAKIPPPPGAAVATRRMQVDPRAEPEYGERVPYVLFQSEPGQLQAD
KALHPADFVADPRLRLDAPHYIIAIIKVLERVFILVGADVKSWYAEMPQTKLLVATRTNSDDKRKPVLLDEHFVS
DRCAACGGPDGEGGLCARCQSNPGEVAYTTMSRTRHARSRQRALHQICESCSAMPQLKEIACDSLDCPVFYLRKK
VEAELAKLEGLKILL
KEGG Ontology ID : K02350
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd05778 DNA_polB_zeta_exo 900-1127 N/A
FunFam 1.10.132.60-FF-000007 DNA polymerase 1465-1630 N/A
Pfam PF03104 DNA polymerase family B, exonuclease domain 61-192 N/A
Pfam PF14260 C4-type zinc-finger of DNA polymerase delta 1653-1723 N/A
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 1205-1218 GO:0000166, GO:0003676, GO:0003887
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 1314-1326 GO:0000166, GO:0003676, GO:0003887
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 1370-1378 GO:0000166, GO:0003676, GO:0003887
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_514,1.10.132.60-FF-000007,1465-1630 FunMod -0.45367 Putative DNA polymerase zeta catalytic subuni LAN_16_514,1.10.132.60-FF-000007,1465-1630
LAN_16_514,1.10.287.690-FF-000002,1273-1331 AlphaFold2 89.42 Putative DNA polymerase zeta catalytic subuni LAN_16_514,1.10.287.690-FF-000002,1273-1331
LAN_16_514,3.30.420.10-FF-000024,902-1188 FunMod -0.50514 Putative DNA polymerase zeta catalytic subuni LAN_16_514,3.30.420.10-FF-000024,902-1188
LAN_16_514,PF03104,61-192 AlphaFold2 93.71 Putative DNA polymerase zeta catalytic subuni LAN_16_514,PF03104,61-192
LAN_16_514,PF14260,1653-1723 AlphaFold2 88.96 Putative DNA polymerase zeta catalytic subuni LAN_16_514,PF14260,1653-1723
Ligand binding site information :
Structure ID Residues
LAN_16_514,3.30.420.10-FF-000024,902-1188 1001,1002,1005,1006,1007,1010,1075,1076,1077,1090,1091,1093,1096,1114,1115,1118,909,910,911,912,919,920
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_514,1.10.287.690-FF-000002,1273-1331 1465,1466,1467,1468,1469,1485,1599,1601,1602,1605,1606,1607,1609,1610,1611,1612,1613,1614
LAN_16_514,1.10.132.60-FF-000007,1465-1630 2,3,5,6,7,8,10,11,12,14,15,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59
LAN_16_514,3.30.420.10-FF-000024,902-1188 1142,1143,1144,1153,1154,1155,1156,1157,1158,1159,1161,1162,1163,1164,1165,1167,1168,1169,1170,1171,1172,1173,1174,1175,1176,1177
LAN_16_514,PF03104,61-192 1,2,3,4,5,6,7,8,9,10,11,12,13,14,108,111,112,113,114,115,117,118,119,120,121,122,123,124,125,126,127,128,129,130,131,132
LAN_16_514,PF14260,1653-1723 41,42,44,45,46,48,49,50,51,52,58,59,60,61,62,63,64,65,66,67,68,69,70,71

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